RPSBLAST alignment for GI: 254780814 and conserved domain: PHA02569
>gnl|CDD|177398 PHA02569, 39, DNA topoisomerase II large subunit; Provisional. Length = 602
Score = 197 bits (502), Expect = 1e-50
Identities = 168/583 (28%), Positives = 255/583 (43%), Gaps = 105/583 (18%)
Query: 13 DSIQILKGLDAVKKRPSMYIGDTDGES----------------GLHHMIYEVLDNAIDES 56
D ++L + + KRP MYIG E+ GL +I E++DN++DE+
Sbjct: 2 DEFKVLSDREHILKRPGMYIGSVAYEAHERFLFGKFTQVEYVPGLVKIIDEIIDNSVDEA 61
Query: 57 LEG---YADIITVTLNMDGSCTVSDNGRGIPTDLHKE---EGISAAEVIMTRLHAGGKFN 110
+ +A+ I VT+ + TVSDNGRGIP + E I TR AG F+
Sbjct: 62 IRTNFKFANKIDVTIK-NNQVTVSDNGRGIPQAMVTTPEGEEIPGPVAAWTRTKAGSNFD 120
Query: 111 QKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAGNDTG 170
+ +V+GG++GVG S+ N S N ++ NG +N T G G
Sbjct: 121 DTN-RVTGGMNGVGSSLTNFFSVLFIGETCDGKNEVTVNCSNG-AENISWST-KPGKGKG 177
Query: 171 TEVTFLPSSDIFSVQDFNYDTLQ---HRLRELSFLNSSVQISLIDKRSPEPREITMFYKG 227
T VTF+P F V + L RL+ L+ + ++ + K+ G
Sbjct: 178 TSVTFIPDFSHFEVNGLDQQYLDIILDRLQTLAVVFPDIKFTFNGKKVS----------G 227
Query: 228 GIEAFVSYLDRHKKPLMQSPIRIQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGT 287
+ + ++Q DN+SI LA DG+ + L F N + K+GG
Sbjct: 228 KFKKYAKQFGDD--TIVQE-------NDNVSIALA-PSPDGFRQ--LSFVNGLHTKNGGH 275
Query: 288 HLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREGFTSVLSIK-MPDPRFSSQTKEK 346
H+ + + ++ ++K + K V +E T VL ++ M +PRF SQTKE+
Sbjct: 276 HVDCVMDDICEELIPMIKKKHKIEVTKARV-----KECLTIVLFVRNMSNPRFDSQTKER 330
Query: 347 LVSS--EVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLD----------ASMVRDAARR 394
L S E+R+ ++ L+ K I K++L A++ R A
Sbjct: 331 LTSPFGEIRNHID---------------LDYKKIAKQILKTEAIIMPIIEAALARKLAAE 375
Query: 395 ARDLTRR-------KGVLDI-ASLPGKLADCSERDPKKSELFLVEGDSAGGSAKQGRSRE 446
T+ K I A+L GK A+ + LFL EGDSA G + R E
Sbjct: 376 KAAETKAAKKAKKAKVAKHIKANLIGKDAE--------TTLFLTEGDSAIGYLIEVRDEE 427
Query: 447 NQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTGIGQDSFDINKLRYHKIIIMTDA 506
PLRGK+LN + +L ++E+ + G +G+ + ++N Y I IMTDA
Sbjct: 428 LHGGYPLRGKVLNTWGMSYADILKNKELFDICAITGLVLGEKAENMN---YKNIAIMTDA 484
Query: 507 DVDG-AHIRTLLLTFFFRQMPSLIHNGFLYIIKPPLYGITRGK 548
DVDG I LLL FF R P L G + +K P+ GK
Sbjct: 485 DVDGKGSIYPLLLAFFSR-WPELFEQGRIRFVKTPVIIAQVGK 526