RPSBLAST alignment for GI: 254780814 and conserved domain: PHA02569

>gnl|CDD|177398 PHA02569, 39, DNA topoisomerase II large subunit; Provisional. Length = 602
 Score =  197 bits (502), Expect = 1e-50
 Identities = 168/583 (28%), Positives = 255/583 (43%), Gaps = 105/583 (18%)

Query: 13  DSIQILKGLDAVKKRPSMYIGDTDGES----------------GLHHMIYEVLDNAIDES 56
           D  ++L   + + KRP MYIG    E+                GL  +I E++DN++DE+
Sbjct: 2   DEFKVLSDREHILKRPGMYIGSVAYEAHERFLFGKFTQVEYVPGLVKIIDEIIDNSVDEA 61

Query: 57  LEG---YADIITVTLNMDGSCTVSDNGRGIPTDLHKE---EGISAAEVIMTRLHAGGKFN 110
           +     +A+ I VT+  +   TVSDNGRGIP  +      E I       TR  AG  F+
Sbjct: 62  IRTNFKFANKIDVTIK-NNQVTVSDNGRGIPQAMVTTPEGEEIPGPVAAWTRTKAGSNFD 120

Query: 111 QKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAGNDTG 170
             + +V+GG++GVG S+ N  S           N   ++  NG  +N    T   G   G
Sbjct: 121 DTN-RVTGGMNGVGSSLTNFFSVLFIGETCDGKNEVTVNCSNG-AENISWST-KPGKGKG 177

Query: 171 TEVTFLPSSDIFSVQDFNYDTLQ---HRLRELSFLNSSVQISLIDKRSPEPREITMFYKG 227
           T VTF+P    F V   +   L     RL+ L+ +   ++ +   K+            G
Sbjct: 178 TSVTFIPDFSHFEVNGLDQQYLDIILDRLQTLAVVFPDIKFTFNGKKVS----------G 227

Query: 228 GIEAFVSYLDRHKKPLMQSPIRIQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGT 287
             + +          ++Q         DN+SI LA    DG+ +  L F N +  K+GG 
Sbjct: 228 KFKKYAKQFGDD--TIVQE-------NDNVSIALA-PSPDGFRQ--LSFVNGLHTKNGGH 275

Query: 288 HLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREGFTSVLSIK-MPDPRFSSQTKEK 346
           H+  +   +  ++   ++K    +  K  V     +E  T VL ++ M +PRF SQTKE+
Sbjct: 276 HVDCVMDDICEELIPMIKKKHKIEVTKARV-----KECLTIVLFVRNMSNPRFDSQTKER 330

Query: 347 LVSS--EVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLD----------ASMVRDAARR 394
           L S   E+R+ ++               L+ K I K++L           A++ R  A  
Sbjct: 331 LTSPFGEIRNHID---------------LDYKKIAKQILKTEAIIMPIIEAALARKLAAE 375

Query: 395 ARDLTRR-------KGVLDI-ASLPGKLADCSERDPKKSELFLVEGDSAGGSAKQGRSRE 446
               T+        K    I A+L GK A+        + LFL EGDSA G   + R  E
Sbjct: 376 KAAETKAAKKAKKAKVAKHIKANLIGKDAE--------TTLFLTEGDSAIGYLIEVRDEE 427

Query: 447 NQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTGIGQDSFDINKLRYHKIIIMTDA 506
                PLRGK+LN     +  +L ++E+  +    G  +G+ + ++N   Y  I IMTDA
Sbjct: 428 LHGGYPLRGKVLNTWGMSYADILKNKELFDICAITGLVLGEKAENMN---YKNIAIMTDA 484

Query: 507 DVDG-AHIRTLLLTFFFRQMPSLIHNGFLYIIKPPLYGITRGK 548
           DVDG   I  LLL FF R  P L   G +  +K P+     GK
Sbjct: 485 DVDGKGSIYPLLLAFFSR-WPELFEQGRIRFVKTPVIIAQVGK 526