RPSBLAST alignment for GI: 254780814 and conserved domain: PLN03128
>gnl|CDD|178674 PLN03128, PLN03128, DNA topoisomerase 2; Provisional. Length = 1135
Score = 161 bits (409), Expect = 6e-40
Identities = 156/590 (26%), Positives = 257/590 (43%), Gaps = 88/590 (14%)
Query: 27 RPSMYIGDT-----------DGE---------SGLHHMIYEVLDNAIDESL-EGYADIIT 65
RP YIG T GE GL+ + E+L NA D + D +
Sbjct: 19 RPDTYIGSTEKHTQTLWVYEGGEMVNREVTYVPGLYKIFDEILVNAADNKQRDPSMDSLK 78
Query: 66 VTLNMD-GSCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVG 124
V ++++ + +V +NG+GIP ++HKEEG+ E+I L F+ K +GG +G G
Sbjct: 79 VDIDVEQNTISVYNNGKGIPVEIHKEEGVYVPELIFGHLLTSSNFDDNEKKTTGGRNGYG 138
Query: 125 VSVVNALSSWLKLRIK--REGNIYEMSFINGI--LDNPLVVTGSAGNDTGTEVTFLPSSD 180
+ N S+ + G Y+ F N + P + + A ++ T++TF P
Sbjct: 139 AKLANIFSTEFTVETADGNRGKKYKQVFTNNMSVKSEPKITSCKA-SENWTKITFKPDLA 197
Query: 181 IFSVQDFNYDT---LQHRLRELS-FLNSSVQISLIDKRSPEPREITMFYKGGIEAFVSYL 236
F++ + D + R+ +++ L +++ L K+ P +++F Y+
Sbjct: 198 KFNMTRLDEDVVALMSKRVYDIAGCLGKKLKVELNGKKLP------------VKSFQDYV 245
Query: 237 D--RHKKPLMQSPIRI---QGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSG 291
RI R + + L+ DG + V F N+I GGTH+
Sbjct: 246 GLYLGPNSREDPLPRIYEKVNDRWEVCVSLS----DGSFQQV-SFVNSIATIKGGTHV-- 298
Query: 292 LRSALTRQITSYVEKSFGSKKDKR--SVIGDDCREGFTSVLSIKMPDPRFSSQTKEKLVS 349
+ QI ++++ KK+K V + ++ + +P F SQTKE L +
Sbjct: 299 --DYVADQIVKHIQEKV-KKKNKNATHVKPFQIKNHLWVFVNCLIENPTFDSQTKETLTT 355
Query: 350 SEVRSVVESFVNDG-LSAWLEEHPLEAKIIVKKVLDASMVRDAARRAR-DLTRRKGVLDI 407
SF + LS + + +V+ +L + + + D +R+ + I
Sbjct: 356 RP-----SSFGSKCELSEEFLKKVEKCG-VVENILSWAQFKQQKELKKKDGAKRQRLTGI 409
Query: 408 ASLPGKLADCSERDPKKSE---LFLVEGDSAGGSAKQGRS---RENQAILPLRGKILNVE 461
KL D ++ KKS+ L L EGDSA A G S R++ + PLRGK+LNV
Sbjct: 410 P----KLDDANDAGGKKSKDCTLILTEGDSAKALAMSGLSVVGRDHYGVFPLRGKLLNVR 465
Query: 462 RARFDKMLSSQEIGTLITALGTGIGQ--DSFDINKLRYHKIIIMTDADVDGAHIRTLLLT 519
A +++ + EI + LG G+ D + LRY ++IMTD D DG+HI+ L++
Sbjct: 466 EASHKQIMKNAEITNIKQILGLQFGKTYDEENTKSLRYGHLMIMTDQDHDGSHIKGLIIN 525
Query: 520 FFFRQMPSLIH-NGFLYIIKPPLYGITRGKSLQ-------YVKDEESLED 561
FF PSL+ GFL P+ T+G Y +ESLE
Sbjct: 526 FFHSFWPSLLKIPGFLVEFITPIVKATKGGKSLSFYTMPEYEAWKESLEG 575