RPSBLAST alignment for GI: 254780814 and conserved domain: COG0187

>gnl|CDD|30536 COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. Length = 635
 Score =  834 bits (2157), Expect = 0.0
 Identities = 336/571 (58%), Positives = 429/571 (75%), Gaps = 5/571 (0%)

Query: 5   IQNSSYDADSIQILKGLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADII 64
            + ++YDA SIQ+L+GL+AV+KRP MYIG T    GLHH+++EV+DN+IDE+L GYAD I
Sbjct: 1   SKTNNYDASSIQVLEGLEAVRKRPGMYIGSTGDGRGLHHLVWEVVDNSIDEALAGYADRI 60

Query: 65  TVTLNMDGSCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVG 124
            VTL+ DGS +V DNGRGIP D+H +E +SA EVI T LHAGGKF+  SYKVSGGLHGVG
Sbjct: 61  DVTLHEDGSISVEDNGRGIPVDIHPKEKVSAVEVIFTVLHAGGKFDNDSYKVSGGLHGVG 120

Query: 125 VSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAGND-TGTEVTFLPSSDIFS 183
           VSVVNALS+WL++ +KR+G IY   F  G+   PL V GS     TGT+V F P  +IF 
Sbjct: 121 VSVVNALSTWLEVEVKRDGKIYRQRFERGVPVTPLEVIGSTDTKKTGTKVRFKPDPEIFG 180

Query: 184 VQDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMFYKGGIEAFVSYLDRHKKPL 243
             +F+Y+ L+ RLREL+FLN  V+I+L D+R+ E  +    Y+GG++ +V YL++ K PL
Sbjct: 181 ETEFDYEILKRRLRELAFLNKGVKITLTDERTGEE-KKEFHYEGGLKDYVEYLNKGKTPL 239

Query: 244 MQSPIRIQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSY 303
            +      G +D I++++A++WNDGY EN+L F NNIP ++GGTH +G RSALTR I  Y
Sbjct: 240 HEEIFYFNGEKDGIAVEVALQWNDGYSENILSFVNNIPTREGGTHEAGFRSALTRAINEY 299

Query: 304 VEKSFGSKKDKRSVIGDDCREGFTSVLSIKMPDPRFSSQTKEKLVSSEVRSVVESFVNDG 363
            +K    K+    + GDD REG T+V+S+K+PDP+F  QTKEKL +SEVRS+VE  V++ 
Sbjct: 300 AKKKNLLKEGD--LTGDDIREGLTAVISVKIPDPQFEGQTKEKLGNSEVRSIVEKLVSEA 357

Query: 364 LSAWLEEHPLEAKIIVKKVLDASMVRDAARRARDLTRRKGVLDIASLPGKLADCSERDPK 423
            S +LEE+P EAK IV+K + A+  R+AAR+AR+LTRRK  LDI  LPGKLADC+ +DP+
Sbjct: 358 FSLFLEENPQEAKKIVEKAIAAAKAREAARKARELTRRKSALDIPGLPGKLADCTSKDPE 417

Query: 424 KSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIGTLITALGT 483
           KSELFLVEGDSAGGSAKQGR RE QAILPLRGKILNVE+AR DK+L ++EI T+ITALGT
Sbjct: 418 KSELFLVEGDSAGGSAKQGRDREFQAILPLRGKILNVEKARLDKILKNEEIQTIITALGT 477

Query: 484 GIGQDSFDINKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPSLIHNGFLYIIKPPLYG 543
           GIG+D FD+ KLRYHKIIIMTDADVDGAHIRTLLLTFF+R MP LI NG +YI +PPLY 
Sbjct: 478 GIGKD-FDLEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRYMPPLIENGHVYIAQPPLYK 536

Query: 544 ITRGKSLQYVKDEESLEDYLINQSLSEEIEL 574
           + +GK   Y  D+E LE  L      +  E+
Sbjct: 537 VKKGKKTFYAYDDEELEKLLERLGKKKGYEI 567