RPSBLAST alignment for GI: 254780814 and conserved domain: KOG0355
>gnl|CDD|35576 KOG0355, KOG0355, KOG0355, DNA topoisomerase type II [Chromatin structure and dynamics]. Length = 842
Score = 262 bits (670), Expect = 3e-70
Identities = 144/603 (23%), Positives = 250/603 (41%), Gaps = 48/603 (7%)
Query: 18 LKGLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNM-DGSCTV 76
L + ++KR + GL+ + E+L NA D+ + + I VT++ +V
Sbjct: 34 LMWVYDMEKRKMVQR---TYVPGLYKIFDEILVNAADKQRDPKMNTIKVTIDKEKNEISV 90
Query: 77 SDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYKVSGG--LHGVGVSVVNALSSW 134
+NG+GIP +HK E + E+I L ++ KV+GG +G + + +
Sbjct: 91 YNNGKGIPVTIHKVEKVYVPELIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFT 150
Query: 135 LKLRIKREGNIYEMSFING-ILDNPLVVTGSAGNDTGTEVTFLPSSDIFSVQDFNYDTLQ 193
++ + ++ ++IN D + S D T++TF P + F +++ + D +
Sbjct: 151 VETADREYKMAFKQTWINNMTRDEEPKIVPSTDED-YTKITFSPDLEKFKMKELDDDIVA 209
Query: 194 HRLRELSFLNS---SVQISLIDKRSPEPREITMFYKGGIEAFVSYLDRH-KKPLMQSPIR 249
R L SV++ L K P ++ F Y+ + + + ++
Sbjct: 210 LMARRAYDLAGSVKSVKVELNGKNIP------------VKGFYDYVKMYLEVLWLNDDLK 257
Query: 250 IQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKSFG 309
N ++A+ +D + V F N+I GGTH+ + + ++ V+K
Sbjct: 258 PLHEVLNFRWEVALALSDVGFQQV-SFVNSIATTKGGTHVDYVVDQIVAKLIDVVKKKKV 316
Query: 310 SKKDKRSVIGDDCREGFTSVLSIKMPDPRFSSQTKEKLVSSEVRSVVESFVNDGLSAWLE 369
K SV + ++ + +P F SQTKE+L R + +++ + +E
Sbjct: 317 KKD--ISVKPFQVKNHLWVFVNCLIENPTFESQTKERLTLRPKRFGSDCELSEKFTKAIE 374
Query: 370 EHPLEAKIIVKKVLDASMVRDAARRARDLTRRKGVLDIASLPGKLADCSERDPKKSELFL 429
+ I+ K L+ A +R + +R KG+ + SE K L L
Sbjct: 375 LKGVVESIL-SKSLNKYKDDLAKKRGKLTSRSKGIPKLEDANDAGTKTSE----KCTLIL 429
Query: 430 VEGDSA---GGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTGIG 486
EGDSA S R+ + PLRGK+LNV A ++L + EI +I LG
Sbjct: 430 TEGDSAKSLAVSGLSVVGRDYYGVFPLRGKLLNVREASHKQILKNAEINAIIKILGLQYK 489
Query: 487 QDSFDINKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPSLIHNGFLYIIKPPLYGITR 546
+ FD+ LRY K++IMTD D DG+HI+ LL+ F PSL+ FL P+ T+
Sbjct: 490 KKYFDVESLRYGKLMIMTDQDHDGSHIKGLLINFIHHFWPSLLQIPFLEEFITPIVKATK 549
Query: 547 GKSLQYVKDEESLEDYLINQSLSEEIELFCDSKGVISKNDLRNFIDDALKIDKLIKDFYP 606
GK E + N S + L K+++
Sbjct: 550 GKQEVSFYSLPEYEKWKKNTD-------NWKSWKIKYYKGLGTSTSKEA------KEYFS 596
Query: 607 NHD 609
+ D
Sbjct: 597 DLD 599