RPSBLAST alignment of GI: 254780814 and protein with PDBid: 3cwv

>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, ATP-binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus dk 1622} Length = 369

 Score =  295 bits (755), Expect = 3e-80
 Identities = 80/373 (21%), Positives = 147/373 (39%), Gaps = 29/373 (7%)

Query: 20  GLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDN 79
            ++ V+KRP MY GD   E GLHH++Y +LD A +E+  G    + + +  DGS  +   
Sbjct: 11  IVENVRKRPGMYCGDVG-EYGLHHLVYFLLDVAYEEARRGECRDVVLEVGGDGSIALFCT 69

Query: 80  GRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRI 139
            R +  +             + R+  G  F  +     G      + V  ALSS  ++ I
Sbjct: 70  SRTVTAE------------NLVRVATGAGFLGRPPGD-GWGWDSMLVVSLALSSRYQVDI 116

Query: 140 KREGNIYEMSFINGILDNPLVVTGS-----AGNDTGTEVTFLPSSDIFSVQDFNYDTLQH 194
             +G  + +   +G                   + G  V F+P + IF V  F+   L  
Sbjct: 117 WADGRQWRVMGEHGHPQGEGAAVTPMEPMPVSAERGVRVHFVPDATIFEVLAFDRARLSR 176

Query: 195 RLRELSFLNSSVQISLIDKRSPEPREITMFYKGGIEAFVSYLDRHKKPLMQSPIRIQGSR 254
           R  EL+ L   +++S  D +  E         GG+  +   L   +  L   P+    + 
Sbjct: 177 RCNELAALAPGLRVSFADLQRGERTL--WHLPGGVAQWAHVLTEARPQLHPEPVVFDFTW 234

Query: 255 DNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKSFGSKKDK 314
           D + +  A++W +     +L F N +     G H+ G+  AL   +     ++ G+    
Sbjct: 235 DGLRVQCALQWCEDEDSTLLSFANAVRTVRHGAHVKGVTQALRGALAKLSGETRGAFP-- 292

Query: 315 RSVIGDDCREGFTSVLSIKMPDP--RFSSQTKEKLVSSEVRSVVESFVNDGLSAWLEEHP 372
                    +G T+++++  P     F+  TKE L    +   +   +       L EHP
Sbjct: 293 ----WARVAQGLTAIVAVSGPRRQMAFAGPTKELLAIPGLEEAIRKQLQPLFIELLREHP 348

Query: 373 LEAKIIVKKVLDA 385
           +   ++ ++   +
Sbjct: 349 VTPALLARRTSGS 361