RPSBLAST alignment of GI: 254780814 and protein with PDBid: 3l4j

>3l4j_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, covalently linked comple supercoiling; HET: DNA PTR TSP; 2.48A {Saccharomyces cerevisiae} PDB: 3l4k_A* 1bjt_A 1bgw_A 2rgr_A* Length = 757

 Score =  248 bits (633), Expect = 4e-66
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 8/163 (4%)

Query: 407 IASLPGKLADCSE---RDPKKSELFLVEGDSAGGSAKQGRS---RENQAILPLRGKILNV 460
           I + P KL D ++   ++  K  L L EGDSA   A  G +   R+     PLRGK+LNV
Sbjct: 3   ITNYP-KLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNV 61

Query: 461 ERARFDKMLSSQEIGTLITALGTGIGQDSFDINKLRYHKIIIMTDADVDGAHIRTLLLTF 520
             A  D++L + EI  +   +G    +   D   LRY  ++IMTD D DG+HI+ L++ F
Sbjct: 62  REASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINF 121

Query: 521 FFRQMPSLIH-NGFLYIIKPPLYGITRGKSLQYVKDEESLEDY 562
                P L+   GFL     P+  ++  K  +      ++ DY
Sbjct: 122 LESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYNMPDY 164