HHsearch alignment of GI: 254780815 and MMDB domain: 1vqq_A_1-110
>1vqq_A (A:1-110) Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus}
Probab=94.22 E-value=0.21 Score=28.38 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHH-----HHHHHHHHHHCCCCCEEEEEEHHHHHHHHH-CCCCCEEEEE
Q ss_conf 9999999999999984276789997318999999-----998777644349820236620001245421-1346456999
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD-----FNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYIT 177 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~~~~-----f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~-~~~~~~~~it 177 (232)
|.+++.++....+||.+||.+....+++...-.. |.+.+..--. | +...-+ ++++.++ +.+++.+.++
T Consensus 1 ~~~p~~~~~~f~~a~~~gd~~~a~~~~s~~~~~~~~~~~~~~~~~~i~~-~--l~~~~~---~v~~~~v~~~~~~~atv~ 74 (110)
T 1vqq_A 1 MASKDKEINNTIDAIEDKNFKQVYKDSSYISKSDNGEVEMTERPIKIYN-S--LGVKDI---NIQDRKIKKVSKNKKRVD 74 (110)
T ss_dssp ----CHHHHHHHHHHHTTCHHHHHHTBCHHHHHHHCHHHHHTHHHHHHH-H--HTCCCE---EEEEEEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHC-C--CCCCCE---EEEECCEEECCCCCEEEE
T ss_conf 9876899999999986461999998659887865679999999998860-3--474642---888342021579807999
Q ss_pred EEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEE
Q ss_conf 9998887776676899680576578489999999996189899866895
Q gi|254780815|r 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226 (232)
Q Consensus 178 V~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~ 226 (232)
+.+.-.. +........-++++| .+..|++.
T Consensus 75 ~~~t~~~---------------~~g~~~y~~~~~lvk----e~~~WkV~ 104 (110)
T 1vqq_A 75 AQYKIKT---------------NYGNIDRNVQFNFVK----EDGMWKLD 104 (110)
T ss_dssp EEEEEEE---------------TTEEEEEEEEEEEEE----CSSSEEEC
T ss_pred EEEEEEE---------------CCCEEEEEEEEEEEE----ECCCEEEE
T ss_conf 9999882---------------686052541689999----78917998