HHsearch alignment of GI: 254780815 and MMDB domain: 3ksp_A_
>3ksp_A (A:) Calcium/calmodulin-dependent kinase II association domain; structural genomics, joint center for structural genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=90.02 E-value=1.3 Score=23.33 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHHH--------HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEE
Q ss_conf 999999999998427678999731899999--------999877764434982023662000124542113464569999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ--------DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~~--------~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~~itV 178 (232)
.+.++.....||+++|.+.+..+++|++.- .-.+.++........ ....+ ..+...+...++.+.++-
T Consensus 11 I~~l~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~i~~~gd~A~~~~ 86 (129)
T 3ksp_A 11 LQTLLSERHAYLXEGNREAXHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQI-QWSNQ---ISESXVVEVFETTALVQE 86 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTTTE-EEEEE---EEEEEEEEECSSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCC-CCCCC---CCCCCEEEEECCEEEEEE
T ss_conf 99999999999983999999987276728984898404689999987525764-41100---012110478424189999
Q ss_pred EEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf 9988877766768996805765784899999999961898998668957632
Q gi|254780815|r 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230 (232)
Q Consensus 179 ~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~ 230 (232)
++..... ..|..+ ....+....|.| .+..|+++..+.
T Consensus 87 ~~~~~~~-----~~g~~~------~~~~r~t~v~~k----~~g~Wki~~~h~ 123 (129)
T 3ksp_A 87 IVEDHFS-----YGRSXY------IGRFRSVSLYHW----ANEGWKWHFHQL 123 (129)
T ss_dssp EEEEEEE-----ETTEEE------EEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred EEEEEEE-----ECCCCC------CEEEEEEEEEEE----ECCEEEEEEEEC
T ss_conf 9999987-----058753------137999999999----599889999847