HHsearch alignment of GI: 254780815 and MMDB domain: 3ksp_A_

>3ksp_A (A:) Calcium/calmodulin-dependent kinase II association domain; structural genomics, joint center for structural genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=90.02  E-value=1.3  Score=23.33  Aligned_cols=105  Identities=14%  Similarity=0.115  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHCHHHHH--------HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEE
Q ss_conf             999999999998427678999731899999--------999877764434982023662000124542113464569999
Q gi|254780815|r  107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ--------DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI  178 (232)
Q Consensus       107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~~--------~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~~itV  178 (232)
                      .+.++.....||+++|.+.+..+++|++.-        .-.+.++........ ....+   ..+...+...++.+.++-
T Consensus        11 I~~l~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~i~~~gd~A~~~~   86 (129)
T 3ksp_A           11 LQTLLSERHAYLXEGNREAXHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQI-QWSNQ---ISESXVVEVFETTALVQE   86 (129)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTTTE-EEEEE---EEEEEEEEECSSEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCC-CCCCC---CCCCCEEEEECCEEEEEE
T ss_conf             99999999999983999999987276728984898404689999987525764-41100---012110478424189999


Q ss_pred             EEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf             9988877766768996805765784899999999961898998668957632
Q gi|254780815|r  179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL  230 (232)
Q Consensus       179 ~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~  230 (232)
                      ++.....     ..|..+      ....+....|.|    .+..|+++..+.
T Consensus        87 ~~~~~~~-----~~g~~~------~~~~r~t~v~~k----~~g~Wki~~~h~  123 (129)
T 3ksp_A           87 IVEDHFS-----YGRSXY------IGRFRSVSLYHW----ANEGWKWHFHQL  123 (129)
T ss_dssp             EEEEEEE-----ETTEEE------EEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred             EEEEEEE-----ECCCCC------CEEEEEEEEEEE----ECCEEEEEEEEC
T ss_conf             9999987-----058753------137999999999----599889999847