HHSEARCH alignment of GI: 254780815 and SCOP domain: d2fxta1

Alignment
>d2fxta1 d.17.4.13 (A:234-425) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=5.9e-37  Score=251.87  Aligned_cols=150  Identities=13%  Similarity=0.227  Sum_probs=142.1

Q ss_pred             CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEH
Q ss_conf             42024577776612676798999999999999-99999842767899973189999999987776443498202366200
Q gi|254780815|r   81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI  159 (232)
Q Consensus        81 ~~~~~~~~~~i~~~~~~Fd~~~Fl~gAk~af~-~I~~A~~~gD~~~L~~lls~~~~~~f~~~i~~r~~~~~~~~~~~v~i  159 (232)
                      .++.+.+++.++++||+||..+|+.|||.+|+ ||++||++||++.|+.||++++|+.|+.+|++|+++|.+.+.++++|
T Consensus        34 ete~~~~l~~ik~~Dp~F~~~~Fl~gak~~~~p~Il~Af~~GD~~~Lk~lls~~vy~~f~~~I~~r~~~g~~~~~~ii~I  113 (192)
T d2fxta1          34 ETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGRILDI  113 (192)
T ss_dssp             CCCSHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHTTCHHHHHHHBCHHHHHHHHHHHHHHHHTTEECCEEECCC
T ss_pred             CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             47899999999987889998999999999999999999985788999987309999999999999998699136898324


Q ss_pred             HHHHHHHHCC--CCCEEEEEEEEEEEEEEEEEC-CCCCEECCCCCCCEEEEEEEEEEECCCCCCCC----EEEEEEEC
Q ss_conf             0124542113--464569999998887776676-89968057657848999999999618989986----68957632
Q gi|254780815|r  160 DDMKIINASI--EENTVYITIRIVGQFISASYD-KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN----WVLISTKL  230 (232)
Q Consensus       160 ~~~~i~~~~~--~~~~~~itV~F~~~~i~~~~d-~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~----W~L~~iq~  230 (232)
                      .+++|++++.  .++.+.++|+|+++|++|++| ++|+||+|+++++..++|+|||+|++++.|||    |+|+++-.
T Consensus       114 ~~~~I~~a~~~~~~~~~~itV~F~t~qi~~~~d~k~G~IieGd~d~i~~v~d~WtF~R~~~~~~pn~~~~W~LiE~~~  191 (192)
T d2fxta1         114 RGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRDPEQIDDDETEGWKILEFVR  191 (192)
T ss_dssp             EEEEEEEEEEETTTTEEEEEEEEEECEEECCEETTTBTTSSCSCCCCCCEEEEEEEECCSSSCTTSSSTTCEEEEEEC
T ss_pred             CEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEC
T ss_conf             302799999744897589999999999999995699957428988507999999999767568988889989998205


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: TIM44-like
domain: Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]