BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780815|ref|YP_003065228.1| hypothetical protein
CLIBASIA_03530 [Candidatus Liberibacter asiaticus str. psy62]
(232 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780815|ref|YP_003065228.1| hypothetical protein CLIBASIA_03530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040492|gb|ACT57288.1| hypothetical protein CLIBASIA_03530 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 232
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII
Sbjct: 1 MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE
Sbjct: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI
Sbjct: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE
Sbjct: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
>gi|315122039|ref|YP_004062528.1| hypothetical protein CKC_01445 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495441|gb|ADR52040.1| hypothetical protein CKC_01445 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 231
Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/231 (67%), Positives = 185/231 (80%), Gaps = 4/231 (1%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFS---GKYVFS-KRDERGIIT 61
M GDFLILL FI FV L+LR LGK+TG+EKP SGF K +FS K D +++
Sbjct: 1 MYLGDFLILLCFFIAVFVILKLRSALGKRTGHEKPLSGFSPEQRKKSIFSPKGDGWNVVS 60
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
L KGKK+D LDSIN LFP+GTRLNKV RDIVS+Y+ FDPKDFLN R+SY IVDSFFEG
Sbjct: 61 LNKGKKEDVLDSINGLFPVGTRLNKVFRDIVSIYSGFDPKDFLNGVRDSYGVIVDSFFEG 120
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ IEKL+DS+VYQDF DSL +KS+EK +KSSLVG+DD+KI+NAS+E N +YIT RIV
Sbjct: 121 NILKIEKLIDSKVYQDFADSLLIQKSSEKVIKSSLVGLDDLKIVNASVEGNNIYITTRIV 180
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
GQFISASYDK+N LI+ DPEIFGKV+D+WTFVRNI SNPNW+LISTK GE
Sbjct: 181 GQFISASYDKNNALIAGDPEIFGKVVDVWTFVRNISSSNPNWILISTKPGE 231
>gi|222147023|ref|YP_002547980.1| Membrane associated transporter protein [Agrobacterium vitis S4]
gi|221734013|gb|ACM34976.1| Membrane associated transporter protein [Agrobacterium vitis S4]
Length = 232
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 133/229 (58%), Gaps = 5/229 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGK--YVFSKRDERGIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP F+G+ ++ ++TL
Sbjct: 1 MGSNDFVTLFFLVAAVLIFWQLRSVLGRRTGNEKPPKDPFAGRPDAASPAAEDARVVTLP 60
Query: 64 KGKKKDNLD---SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + D + +I+ P GT LN+ +R +V V F PK+FLN AR +YE IV +F
Sbjct: 61 RRDEADGEERQTAIDAYAPAGTPLNQQLRQVVEVDPSFVPKEFLNGARMAYEMIVTAFAA 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G +++ L+ VY F+ +++ R+ + +KS+ VGID +I +A + + V IT+R+
Sbjct: 121 GDRKSLKDLLSREVYDGFDAAITEREQRGEVMKSTFVGIDKAEITSAEVRDQEVQITVRL 180
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
V Q ISA+YD +I D E G V DIWTF R+ +PNW LI+T+
Sbjct: 181 VSQLISATYDSQGAVIEGDAESVGDVNDIWTFARDTRSRDPNWKLIATE 229
>gi|325291461|ref|YP_004277325.1| hypothetical protein AGROH133_02812 [Agrobacterium sp. H13-3]
gi|325059314|gb|ADY63005.1| hypothetical protein AGROH133_02812 [Agrobacterium sp. H13-3]
Length = 232
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 134/229 (58%), Gaps = 5/229 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSK--RDERGIITLG 63
M DF+ L F +FLQLR VLG++TGNEKP ++ + V D+ ++TL
Sbjct: 1 MGFSDFITLFFLVAAVLIFLQLRSVLGRRTGNEKPPFDPYTPRDVAKGPVTDDNKVVTLP 60
Query: 64 KGKKKDNLDSINE---LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K + ++ + E L P+ T LN +R++++ F PK+FLN AR +YE IV F +
Sbjct: 61 KRSEAEDENRFAEADALAPVDTALNTSLRELMTKDPTFRPKEFLNGARMAYEMIVMGFAD 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G ++ L+ V+ F ++S R+S + VKS+ VGI+ I A I ++ IT+RI
Sbjct: 121 GDRKTLKNLLSKEVFDGFEAAISERESRGEVVKSTFVGIEKADITQAGIRDSEEQITLRI 180
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
V Q ISA+YDKD L+ DP+ +V DIWTF R++ +PNW LI+T+
Sbjct: 181 VSQLISATYDKDGKLVDGDPDAVAEVDDIWTFSRDVRSRDPNWKLIATE 229
>gi|222084209|ref|YP_002542735.1| translocase transmembrane protein [Agrobacterium radiobacter K84]
gi|221721657|gb|ACM24813.1| translocase transmembrane protein [Agrobacterium radiobacter K84]
Length = 233
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 133/230 (57%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFS---KRDERGIITL 62
M + DF+ + F +F QLR VLG++TGNEKP + + D ++TL
Sbjct: 1 MGANDFVTIFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYGSPDQATGPNAPDAGKVVTL 60
Query: 63 GK---GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ P GT LN +R++ F PK+F+N AR +YE IV +F
Sbjct: 61 PRRDATEDEDRFAAIDAFTPAGTPLNDSLRELNKADPSFSPKEFVNGARMAYEMIVMAFA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G +A++ L+ VY+ F+ +++ R++ + VKS+ VGID I++A +++ +T+R
Sbjct: 121 DGDRNALKGLLSREVYEGFDAAITDRETKGEKVKSTFVGIDKADIVSAEMKDTEATVTMR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IV Q ISA+YDK LI D E ++ D+WTF R+ +PNW L++T+
Sbjct: 181 IVSQMISATYDKAGTLIDGDAETVAEISDVWTFARDSRSRDPNWKLVATE 230
>gi|218661852|ref|ZP_03517782.1| import inner membrane translocase subunit Tim44 [Rhizobium etli
IE4771]
Length = 234
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 131/230 (56%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ G+ +D +I+ + GT LN+ +R + F+PK+FLN AR +YE IV ++
Sbjct: 61 RRDATGEDEDRFAAIDAVAAPGTPLNESLRALNKADPSFNPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R+S + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGERESRGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATE 230
>gi|159184122|ref|NP_353048.2| hypothetical protein Atu0008 [Agrobacterium tumefaciens str. C58]
gi|159139459|gb|AAK85833.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 217
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 5/214 (2%)
Query: 21 FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSK--RDERGIITL---GKGKKKDNLDSIN 75
+F QLR VLG++TGNEKP +S + V D+ ++TL G+ ++ + +
Sbjct: 1 MLIFFQLRSVLGRRTGNEKPPFDPYSPRDVAKGPVADDNKVVTLPKRGEAEEDNRFAEAD 60
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
L P T LN +RD+++ F PK+FLN AR +YE IV F +G ++ L+ V+
Sbjct: 61 ALAPADTPLNASLRDVMTKDPSFRPKEFLNGARMAYEMIVMGFADGDRKTLKNLLSKEVF 120
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
F ++S R+S + VKS+ VGI+ I A + ++ V +T+RIV Q ISA+YDKD L
Sbjct: 121 DGFEAAISERESRGEVVKSTFVGIEKADITQAGVRDSEVQVTLRIVSQLISATYDKDGKL 180
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ DPE +V DIWTF R+I +PNW LI+T+
Sbjct: 181 VDGDPEAVAEVDDIWTFSRDIRSRDPNWKLIATE 214
>gi|218673282|ref|ZP_03522951.1| import inner membrane translocase subunit Tim44 [Rhizobium etli
GR56]
Length = 234
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ + GT LN+ +R + F+PK+FLN AR +YE IV ++
Sbjct: 61 RRDATAEDEDRFAAIDAVAAPGTPLNESLRALNKADPSFNPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATE 230
>gi|86355677|ref|YP_467569.1| putative translocase transmembrane protein [Rhizobium etli CFN 42]
gi|86279779|gb|ABC88842.1| putative translocase transmembrane protein [Rhizobium etli CFN 42]
Length = 234
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 126/237 (53%), Gaps = 20/237 (8%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFS------------GKYV-FS 52
M S DF+ L F +F QLR VLG++TGNEKP +S GK V
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYSPREAAPPEAAEAGKVVTLP 60
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+RD +D +I+ GT LN+ +R + F PK+FLN AR +YE
Sbjct: 61 RRD-------ATADDEDRFSAIDAFAAPGTPLNESLRALNKADPSFSPKEFLNGARMAYE 113
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+V ++ +G ++ L+ VY F ++ R++ + VKS+ VGID +I +A + +
Sbjct: 114 MVVMAYADGDRKTLKSLLSREVYDGFEAAIGEREARGEKVKSTFVGIDKAEITHAETKGS 173
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IT+RIV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 174 EAQITVRIVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATE 230
>gi|116249774|ref|YP_765612.1| hypothetical protein RL0008 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254422|emb|CAK05496.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 234
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 128/230 (55%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATTEDEDRFAAIDAFAAPGTPLNESLRALNKADPAFSPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I Q ISA+YDK ++LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IASQLISATYDKADVLIEGDAENVAEVNDVWTFARDTRSRDPNWKLVATE 230
>gi|209551513|ref|YP_002283430.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209537269|gb|ACI57204.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 234
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 129/230 (56%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATTEDEDRFAAIDAFAAPGTPLNESLRALNKADPAFSPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGERETRGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I+ Q ISA+YDK ++LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IISQLISATYDKADVLIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATE 230
>gi|241206951|ref|YP_002978047.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860841|gb|ACS58508.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 234
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 128/230 (55%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATTEDEDRFAAIDAFAAPGTPLNESLRALNKADPAFTPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I Q ISA+YDK ++LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IASQLISATYDKADVLIEGDAENVAEVNDVWTFARDTRSRDPNWKLVATE 230
>gi|150398408|ref|YP_001328875.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
medicae WSM419]
gi|150029923|gb|ABR62040.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
medicae WSM419]
Length = 234
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 131/231 (56%), Gaps = 7/231 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFS---KRDERGIITL 62
M S DF+ F +FLQLR VLG++TG+E+P +S + + +D ++ L
Sbjct: 1 MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGSERPPFDPYSSRDIAQGPEAKDNGKVVQL 60
Query: 63 ----GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
G + + I + GT LN +R + +F+P +FLN A+ +YE IV +F
Sbjct: 61 PRRDGAAEDESRYAEIETVAKAGTPLNAQLRAVTDADPNFNPVEFLNGAKMAYEMIVMAF 120
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G ++ L+ VY+ F +++ R++ + VKS+ VGID I++A I+++ IT+
Sbjct: 121 ADGDRKTLKGLLSREVYEGFEAAIAERENKGEVVKSTFVGIDKADIVHAEIKDSEENITV 180
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
RI+ Q ISA+YDK L+ D E +V D+WTF R+I +PNW LI+T+
Sbjct: 181 RIISQLISATYDKQGKLVDGDAESVAEVNDLWTFSRDIRSRDPNWKLIATE 231
>gi|328545867|ref|YP_004305976.1| Import inner membrane translocase subunit Tim44 [polymorphum gilvum
SL003B-26A1]
gi|326415607|gb|ADZ72670.1| Import inner membrane translocase subunit Tim44 [Polymorphum gilvum
SL003B-26A1]
Length = 242
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 24/242 (9%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---------- 58
D ++F + FVF +LR VLGK+TGNE+P F Y RD R
Sbjct: 6 DIYNIIFLALAIFVFFRLRSVLGKRTGNERPPFD-----PYSKPARDNRAPGGAEAGGVD 60
Query: 59 -IITL-------GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNS 110
+I L G G + ++++ P G+ LN +R I+SV F+P+ FL AR +
Sbjct: 61 NVIPLPGKPVEAGAGDTERGAVVLDKVAPSGSALNAALRQILSVDRSFEPEQFLQGARAA 120
Query: 111 YEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE 170
YE IV +F EG ++ L+ VY F ++S R++ + ++S+ VGID I+ A+++
Sbjct: 121 YEMIVTAFAEGDRKTLKNLLSKEVYDGFVTAISEREARGETIESTFVGIDKADIVEAALK 180
Query: 171 ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ +T+R+ + ISA+ DKD ++ DP +V+DIWTF R+ +PNW L++T+
Sbjct: 181 GSVAQVTVRLQSELISATRDKDGHVVDGDPSRVTEVVDIWTFARDTTSRDPNWKLVATES 240
Query: 231 GE 232
E
Sbjct: 241 AE 242
>gi|15963761|ref|NP_384114.1| putative translocase transmembrane protein [Sinorhizobium meliloti
1021]
gi|307302564|ref|ZP_07582321.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti BL225C]
gi|307316105|ref|ZP_07595549.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti AK83]
gi|15072936|emb|CAC41395.1| Import inner membrane translocase subunit TIM44 [Sinorhizobium
meliloti 1021]
gi|306897945|gb|EFN28687.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti AK83]
gi|306903234|gb|EFN33824.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti BL225C]
Length = 233
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 131/230 (56%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFS---KRDERGIITL 62
M S DF+ F +FLQLR VLG++TG+E+P +S + + +D ++ L
Sbjct: 1 MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGSERPPFDPYSPRDIAQGPEAKDNGKVVQL 60
Query: 63 GK---GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + + +I + GT LN +R + +F+P +FLN A+ +YE IV +F
Sbjct: 61 PRRETAEDESRYAAIEIVAKAGTPLNAQLRAMTDADPNFNPAEFLNGAKMAYEMIVMAFA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY+ F +++ R++ + VKS+ VGID I++A I++ IT+R
Sbjct: 121 DGDRKTLKGLLSREVYEGFEAAIAEREAKGEVVKSTFVGIDKADIVHAEIKDAEENITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I+ Q ISA+YDK L+ D + +V D+WTF R+I +PNW LI+T+
Sbjct: 181 IISQLISATYDKQGKLVDGDADSVAEVNDLWTFARDIRSRDPNWKLIATE 230
>gi|239833115|ref|ZP_04681444.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
intermedium LMG 3301]
gi|239825382|gb|EEQ96950.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
intermedium LMG 3301]
Length = 253
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 22 FVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINEL 77
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I++
Sbjct: 39 IIFLQLRNVLGRRTGNEKPPFDPYTSARSADAAPAGSETDNVVSLPRRTGEKDFTAIDKA 98
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
P GT +N +R I + FDP F++ + +YE IV SF +G ++ L+ VY+
Sbjct: 99 APAGTPVNDGLRAIYAADPSFDPASFVDGVKIAYEMIVMSFADGDRKVLKNLLSKDVYEG 158
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
F ++ R++ ++V+SS VGID +I A ++ + ++T+ IV Q IS++YDKD LI
Sbjct: 159 FVSAIDEREARGESVRSSFVGIDKAEITGAEMKGSEAHVTVNIVSQMISSTYDKDGKLID 218
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
DPE ++ D+WTF R+ +PNW L++T+
Sbjct: 219 GDPENVLEIKDLWTFARDTRSRDPNWKLVATE 250
>gi|227823867|ref|YP_002827840.1| putative import inner membrane translocase, subunit Tim44
[Sinorhizobium fredii NGR234]
gi|227342869|gb|ACP27087.1| putative import inner membrane translocase, subunit Tim44
[Sinorhizobium fredii NGR234]
Length = 233
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 128/230 (55%), Gaps = 6/230 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF--SKRDERGIITLG 63
M S DF+ F +FLQLR VLG++TGNE+P +S + RD ++ L
Sbjct: 1 MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGNERPPFDPYSPREAQGPEARDNGKVVQLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + + +I+ GT LN +R + F P +FLN A+ +YE IV +F
Sbjct: 61 RRESTAEDESRYAAIDGFSKPGTPLNGQLRALSDADPSFQPAEFLNGAKMAYEMIVMAFA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY+ F +++ R++ + VKS+ VGI+ I++A +++ +T+R
Sbjct: 121 DGDRKTLKGLLSREVYEGFETAIAERETRGEVVKSTFVGIEKADIVHAELKDAEENVTVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I+ Q ISA+YDK LI D + +V D+WTF R+I +PNW LI+T+
Sbjct: 181 IISQLISATYDKQGKLIDGDADSVAEVNDLWTFARDIRSRDPNWKLIATE 230
>gi|307943366|ref|ZP_07658710.1| import inner membrane translocase subunit Tim44 [Roseibium sp.
TrichSKD4]
gi|307772996|gb|EFO32213.1| import inner membrane translocase subunit Tim44 [Roseibium sp.
TrichSKD4]
Length = 244
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 136/246 (55%), Gaps = 30/246 (12%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERGIITLGKGKKK 68
D ++F + F+ +L+ VLGK+TGNE+P F +SK+D+ G + G +
Sbjct: 6 DVYNIIFLGLAVFILFRLKSVLGKRTGNERPPFD-------PYSKQDDAGQSSQGGKSQS 58
Query: 69 DNLDS----------------------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNE 106
DN+ I++L P GT LN+ ++ I+SV F+P++F+
Sbjct: 59 DNVIPMPGQESYQETGIREPEENGEVVIDKLAPQGTALNEALKQILSVDRTFEPREFIEG 118
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
A +YE IV +F EG +++L+ V+ F ++ R+ ++ ++S+ VGID +I+
Sbjct: 119 ASAAYEMIVTAFAEGDRKTLKQLLSKDVFDGFIMAIDEREKRDEVIESTFVGIDKAEIVE 178
Query: 167 ASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
A++++ T +T+++ Q ISA+ DKD ++ DP +VIDIWTF R+ +PNW L+
Sbjct: 179 AALKDGTAQVTVKVQSQLISATCDKDGEVVDGDPNKVSEVIDIWTFARDTGSRDPNWKLV 238
Query: 227 STKLGE 232
+T+ E
Sbjct: 239 ATESAE 244
>gi|190889648|ref|YP_001976190.1| translocase transmembrane protein [Rhizobium etli CIAT 652]
gi|190694927|gb|ACE89012.1| putative translocase transmembrane protein [Rhizobium etli CIAT
652]
Length = 233
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP + + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYQPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ + GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATAEDEDRFSAIDAVAAPGTPLNESLRALNKADASFTPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGTEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
IV Q ISA+YDK ++LI D E +V D+WTF P + ++G
Sbjct: 181 IVSQLISATYDKADVLIEGDAENVAEVNDLWTFAPRYPLARSELETCGDRIG 232
>gi|153008182|ref|YP_001369397.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
anthropi ATCC 49188]
gi|151560070|gb|ABS13568.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
anthropi ATCC 49188]
Length = 231
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 23 VFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELF 78
+FLQLR VLG++TG+EKP ++ S + + +++L + + + +I++
Sbjct: 18 IFLQLRNVLGRRTGSEKPPFDPYTSARSADAAPASGETDNVVSLPRRPGEKDFTAIDKAA 77
Query: 79 PIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF 138
P+GT +N MR I + FDP F+ + +YE IV SF +G ++ L+ V++ F
Sbjct: 78 PVGTPVNDGMRAIYAADPSFDPAGFVEGVKIAYEMIVMSFADGDRKVLKNLLSKDVFEGF 137
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
++ R++ ++V+SS VGID +I A ++ + ++T+ IV Q IS+++DKD LI
Sbjct: 138 VSAIDDRETRGESVRSSFVGIDKAEIAGAEMKGSEAHVTVNIVSQMISSTFDKDGKLIDG 197
Query: 199 DPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
DPE ++ D+WTF R+ +PNW L++T+
Sbjct: 198 DPENVLEIKDLWTFARDTRSRDPNWKLVATE 228
>gi|118591473|ref|ZP_01548870.1| Calcium-binding EF-hand [Stappia aggregata IAM 12614]
gi|118435801|gb|EAV42445.1| Calcium-binding EF-hand [Stappia aggregata IAM 12614]
Length = 230
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 129/228 (56%), Gaps = 14/228 (6%)
Query: 19 ITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR----DERGIITLGKGKKKDNL--- 71
+ F+ +LR VLGK+TGNE+P +S R D+ +I L +D
Sbjct: 3 LAVFILFRLRSVLGKRTGNERPPFDPYSKPDQQRDRKNGNDQDNVIPLPNQPMQDAETVE 62
Query: 72 DS-------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
D+ I+++ P G+ LN ++ I+SV F+P+ FL AR +YE IV +F +G
Sbjct: 63 DTGRGGDVVIDKVAPAGSALNSALKQILSVDRSFEPEPFLEGARAAYEMIVMAFADGDKK 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
A++ L+ VY+ F ++ R+ + ++S+ VGID +I+ A+++ +T +T++I Q
Sbjct: 123 ALKNLLSREVYEGFVAAIDEREKRGETIESTFVGIDKAEIVEAALKNSTAQVTVKIHSQL 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
ISA+ DK+ ++ DP +VIDIWTF R+ +PNW L++T+ E
Sbjct: 183 ISATRDKNGEVVDGDPAKVSEVIDIWTFARDTTSRDPNWKLVATESAE 230
>gi|319407969|emb|CBI81623.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 230
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 128/227 (56%), Gaps = 4/227 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKG 65
D ++++ I VF+QLR VLGK+TG E+P +SG + D
Sbjct: 4 DVVLVIALVIMVVVFMQLRNVLGKRTGFERPPFDPYSGCSKKQIETETVDHSLSFPHQAN 63
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+K + I+ + P G+ LN +R I ++F P+ F+N + +YE I+ +F +G
Sbjct: 64 ARKKDFSEIDAIAPEGSALNDGLRAICQADSNFSPQFFVNGVQIAYEMIMTAFAQGDRDQ 123
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
++KL+ V++ F ++ R+ E+ V+ + VGI+ ++ + A +++N ++T+RIV + I
Sbjct: 124 LKKLLSQDVFESFCAAIERREKREEKVEFTFVGINKVEFVAAEMQKNEEFLTVRIVSEII 183
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
S +Y+K N I DPE ++ D+WTFVRN +PNW L +T+ G+
Sbjct: 184 SVTYNKQNECIDGDPEAIVEIKDVWTFVRNSLSQDPNWKLFATEDGD 230
>gi|110635813|ref|YP_676021.1| import inner membrane translocase, subunit Tim44 [Mesorhizobium sp.
BNC1]
gi|110286797|gb|ABG64856.1| import inner membrane translocase, subunit Tim44 [Chelativorans sp.
BNC1]
Length = 235
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 131/231 (56%), Gaps = 8/231 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDER----GIITLGK 64
DF + F +F QLR VLG++TG+E+P F + +G+ ++ ++ ++ L +
Sbjct: 5 DFGTIFFLVAAVVIFFQLRNVLGRRTGSERPPFDPYTAGRSRPAEAEKSVKNDTVVALPR 64
Query: 65 GK---KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
K ++ + I+++ GT LN+ +R I FDP F++ A+ +YE IV +F +G
Sbjct: 65 RKGLVDEERYNIIDKVAQPGTELNRGLRAIKDADPSFDPNTFVDGAKLAYEMIVMAFADG 124
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
++ L+ VY+ F ++ R+ + ++SS VGID II+A ++ + ++T+RIV
Sbjct: 125 DRRTLKNLLSREVYEGFVSAIDERERRSEKIESSFVGIDKATIISAEMKGSEAHVTLRIV 184
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ ISA+ D +I DPE +V DIWTF R+ +PNW L++T+ E
Sbjct: 185 SELISATRDSGGSIIDGDPETVAEVKDIWTFARDTRSRDPNWKLVATEAEE 235
>gi|27375753|ref|NP_767282.1| hypothetical protein blr0642 [Bradyrhizobium japonicum USDA 110]
gi|27348891|dbj|BAC45907.1| blr0642 [Bradyrhizobium japonicum USDA 110]
Length = 235
Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 122/230 (53%), Gaps = 11/230 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL-GKGKKK 68
D ++F + F+FL+LR VLG++TGNE+P + + ++ ++T+ GK +
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGNERPPFDHTAARNALGGAQDKNVVTMPGKVIDQ 61
Query: 69 DNLDSINELFPI----------GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
L E P GT L + + IV + FDP+ F++ AR +YE IV +F
Sbjct: 62 APLAPTVEPTPPSDRWKGLTEPGTALAQGLDAIVDKDSTFDPRHFISGARGAYEMIVLAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A+ L+ S VY+ F+ ++ R+ NE+ ++ V ID +++ A + + T +TI
Sbjct: 122 ANGDRRALRDLLSSEVYESFDAAIKEREKNEQKTETRFVSIDKAELVGAELRDRTAQLTI 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
R V Q ISA+ DK ++ + + DIWTF R+I +PNW L+ T
Sbjct: 182 RFVSQMISATRDKAGNIVDGSADTVADITDIWTFARDITSRDPNWKLVGT 231
>gi|49474924|ref|YP_032965.1| hypothetical protein BH01040 [Bartonella henselae str. Houston-1]
gi|49237729|emb|CAF26919.1| hypothetical protein BH01040 [Bartonella henselae str. Houston-1]
Length = 230
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 128/224 (57%), Gaps = 4/224 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKG 65
D +++L I VF+QLR VLGK+ G EKP +S + D ++
Sbjct: 4 DIVLVLALVIMVVVFMQLRNVLGKRIGFEKPPFDPYSSRSKKQIETETADNNASLSHQVN 63
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+K++ I+ + P G+ LNK +R + F P+ F+ A+ +YE IV +F +G +
Sbjct: 64 SQKNDFSEIDAIAPEGSELNKGLRALHQNDPHFSPQFFIKGAQVAYEMIVTAFAKGDRNQ 123
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ +L+ V++ F+ ++ R+ N + V+ + VGI+ ++ + A+++E ++TIRIV + I
Sbjct: 124 LRRLLSQDVFESFDAAIEQREKNNERVQFTFVGINKIEFVAAAMQEKEEFLTIRIVSEMI 183
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
SA+Y++ I DP+ ++ DIWTFVRN ++PNW L +T+
Sbjct: 184 SATYNEQGERIDGDPDTIVEIRDIWTFVRNSLSTDPNWKLFATE 227
>gi|319780601|ref|YP_004140077.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166489|gb|ADV10027.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 235
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 127/229 (55%), Gaps = 10/229 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKG 65
DF + F +F QLR VLG++TG+E+P +S +G +++ E +++L +
Sbjct: 5 DFGTIFFLIAAVVIFFQLRNVLGRRTGSERPPFDPYSAARTGDKDAAQKSE-NVVSLPRK 63
Query: 66 K-----KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ D +I+ T LNK +R I F+PK F++ A+ +YE IV ++ +
Sbjct: 64 RPPGEPAPDAYAAIDAFAKPDTDLNKGLRTIKDNDPSFEPKGFVDGAKMAYEMIVMAYAD 123
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G ++ L+ VY F ++ R++ + ++SS VGID I++A ++ ++T+RI
Sbjct: 124 GDRKTLKNLLSREVYDGFVAAIGEREAKAEKIQSSFVGIDKADIVSAEMKGGEAHVTLRI 183
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + ISA+ DK +I DPE +V D+WTF R+ +PNW L++T+
Sbjct: 184 ISELISATRDKAGAVIDGDPETVAEVKDVWTFARDTRSRDPNWKLVATE 232
>gi|62290918|ref|YP_222711.1| hypothetical protein BruAb1_2049 [Brucella abortus bv. 1 str.
9-941]
gi|62197050|gb|AAX75350.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
Length = 231
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 135 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNMVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|260467422|ref|ZP_05813593.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
opportunistum WSM2075]
gi|259028818|gb|EEW30123.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
opportunistum WSM2075]
Length = 236
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 11/230 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITL--- 62
DF + F +F QLR VLG++TG+E+P ++ +G +++ E +++L
Sbjct: 5 DFGTIFFLIAAVVIFFQLRNVLGRRTGSERPPFDPYTAARTGDKDAAQKPE-NVVSLPRK 63
Query: 63 ---GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
G+ D +I+ T LNK +R I FDPK F++ A+ +YE IV ++
Sbjct: 64 RLPGEPAAPDAYAAIDAFAKPDTDLNKGLRTIKDNDPSFDPKGFVDGAKMAYEMIVMAYA 123
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ V+ F ++ R++ + ++SS VGID I++A ++ ++T+R
Sbjct: 124 DGDRKTLKNLLSREVFDGFVAAIGEREAKSEKIQSSFVGIDKADIVSAEMKGGEAHVTLR 183
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I+ + ISA+ DK +I DPE +V D+WTF R+ +PNW L++T+
Sbjct: 184 IISELISATRDKAGTVIDGDPETVAEVKDVWTFARDTRSRDPNWKLVATE 233
>gi|23502922|ref|NP_699049.1| hypothetical protein BR2074 [Brucella suis 1330]
gi|82700829|ref|YP_415403.1| calcium-binding EF-hand [Brucella melitensis biovar Abortus 2308]
gi|225626454|ref|ZP_03784493.1| import inner membrane translocase subunit Tim44 [Brucella ceti str.
Cudo]
gi|237816425|ref|ZP_04595418.1| Tim44-like domain protein [Brucella abortus str. 2308 A]
gi|256370472|ref|YP_003107983.1| hypothetical protein BMI_I2096 [Brucella microti CCM 4915]
gi|23348955|gb|AAN30964.1| conserved hypothetical protein [Brucella suis 1330]
gi|82616930|emb|CAJ12031.1| Calcium-binding EF-hand [Brucella melitensis biovar Abortus 2308]
gi|225618111|gb|EEH15154.1| import inner membrane translocase subunit Tim44 [Brucella ceti str.
Cudo]
gi|237788492|gb|EEP62707.1| Tim44-like domain protein [Brucella abortus str. 2308 A]
gi|256000635|gb|ACU49034.1| hypothetical protein BMI_I2096 [Brucella microti CCM 4915]
Length = 235
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 19 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 78
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 79 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 138
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 139 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 198
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 199 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 232
>gi|161619988|ref|YP_001593875.1| import inner membrane translocase subunit Tim44 [Brucella canis
ATCC 23365]
gi|163844092|ref|YP_001628496.1| import inner membrane translocase subunit Tim44 [Brucella suis ATCC
23445]
gi|189025131|ref|YP_001935899.1| Calcium-binding EF-hand [Brucella abortus S19]
gi|254690207|ref|ZP_05153461.1| Calcium-binding EF-hand [Brucella abortus bv. 6 str. 870]
gi|254694697|ref|ZP_05156525.1| Calcium-binding EF-hand [Brucella abortus bv. 3 str. Tulya]
gi|254696324|ref|ZP_05158152.1| Calcium-binding EF-hand [Brucella abortus bv. 2 str. 86/8/59]
gi|254700706|ref|ZP_05162534.1| Calcium-binding EF-hand [Brucella suis bv. 5 str. 513]
gi|254705077|ref|ZP_05166905.1| Calcium-binding EF-hand [Brucella suis bv. 3 str. 686]
gi|254709052|ref|ZP_05170863.1| Calcium-binding EF-hand [Brucella pinnipedialis B2/94]
gi|254713521|ref|ZP_05175332.1| Calcium-binding EF-hand [Brucella ceti M644/93/1]
gi|254716123|ref|ZP_05177934.1| Calcium-binding EF-hand [Brucella ceti M13/05/1]
gi|254718117|ref|ZP_05179928.1| Calcium-binding EF-hand [Brucella sp. 83/13]
gi|254731240|ref|ZP_05189818.1| Calcium-binding EF-hand [Brucella abortus bv. 4 str. 292]
gi|256030577|ref|ZP_05444191.1| Calcium-binding EF-hand [Brucella pinnipedialis M292/94/1]
gi|256060039|ref|ZP_05450221.1| Calcium-binding EF-hand [Brucella neotomae 5K33]
gi|260169483|ref|ZP_05756294.1| Calcium-binding EF-hand [Brucella sp. F5/99]
gi|260546180|ref|ZP_05821920.1| calcium-binding EF-hand protein [Brucella abortus NCTC 8038]
gi|260567455|ref|ZP_05837925.1| calcium-binding EF-hand protein [Brucella suis bv. 4 str. 40]
gi|260755747|ref|ZP_05868095.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 6 str. 870]
gi|260758971|ref|ZP_05871319.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 4 str. 292]
gi|260760695|ref|ZP_05873038.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 2 str. 86/8/59]
gi|261215024|ref|ZP_05929305.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 3 str. Tulya]
gi|261217893|ref|ZP_05932174.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261316550|ref|ZP_05955747.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|261321257|ref|ZP_05960454.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
gi|261324015|ref|ZP_05963212.1| import inner membrane translocase subunit Tim44 [Brucella neotomae
5K33]
gi|261751215|ref|ZP_05994924.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|261755779|ref|ZP_05999488.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|261759008|ref|ZP_06002717.1| calcium-binding EF-hand protein [Brucella sp. F5/99]
gi|265983069|ref|ZP_06095804.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|265987624|ref|ZP_06100181.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|306839744|ref|ZP_07472546.1| import inner membrane translocase subunit Tim44 [Brucella sp. NF
2653]
gi|306842810|ref|ZP_07475450.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO2]
gi|306843493|ref|ZP_07476094.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO1]
gi|161336799|gb|ABX63104.1| import inner membrane translocase subunit Tim44 [Brucella canis
ATCC 23365]
gi|163674815|gb|ABY38926.1| import inner membrane translocase subunit Tim44 [Brucella suis ATCC
23445]
gi|189020703|gb|ACD73425.1| Calcium-binding EF-hand [Brucella abortus S19]
gi|260096287|gb|EEW80163.1| calcium-binding EF-hand protein [Brucella abortus NCTC 8038]
gi|260156973|gb|EEW92053.1| calcium-binding EF-hand protein [Brucella suis bv. 4 str. 40]
gi|260669289|gb|EEX56229.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 4 str. 292]
gi|260671127|gb|EEX57948.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 2 str. 86/8/59]
gi|260675855|gb|EEX62676.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 6 str. 870]
gi|260916631|gb|EEX83492.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 3 str. Tulya]
gi|260922982|gb|EEX89550.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261293947|gb|EEX97443.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
gi|261295773|gb|EEX99269.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|261299995|gb|EEY03492.1| import inner membrane translocase subunit Tim44 [Brucella neotomae
5K33]
gi|261738992|gb|EEY26988.1| calcium-binding EF-hand protein [Brucella sp. F5/99]
gi|261740968|gb|EEY28894.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|261745532|gb|EEY33458.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|264659821|gb|EEZ30082.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|264661661|gb|EEZ31922.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|306276184|gb|EFM57884.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO1]
gi|306287004|gb|EFM58515.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO2]
gi|306405204|gb|EFM61481.1| import inner membrane translocase subunit Tim44 [Brucella sp. NF
2653]
Length = 231
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 135 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|256112399|ref|ZP_05453320.1| transporter [Brucella melitensis bv. 3 str. Ether]
gi|265993836|ref|ZP_06106393.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
gi|262764817|gb|EEZ10738.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
Length = 231
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---IITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP F + S + + G +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGGPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 135 EGFVAAIDEREKQGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|256158573|ref|ZP_05456463.1| calcium-binding EF-hand [Brucella ceti M490/95/1]
gi|256253984|ref|ZP_05459520.1| calcium-binding EF-hand [Brucella ceti B1/94]
gi|261221124|ref|ZP_05935405.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|265997084|ref|ZP_06109641.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
gi|260919708|gb|EEX86361.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|262551552|gb|EEZ07542.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
Length = 231
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 135 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQIISSTLDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|17988336|ref|NP_540970.1| transporter [Brucella melitensis bv. 1 str. 16M]
gi|17984111|gb|AAL53234.1| transporter [Brucella melitensis bv. 1 str. 16M]
Length = 216
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 21 FFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---IITLGKGKKKDNLDSINE 76
+FLQLR VLG++TGNEKP F + S + + G +++L + + + +I++
Sbjct: 1 MIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGGPDNVVSLPRRANEKDYTAIDK 60
Query: 77 LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
+ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY+
Sbjct: 61 IAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVYE 120
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +I
Sbjct: 121 GFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKVI 180
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 181 DGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 213
>gi|225853505|ref|YP_002733738.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis ATCC 23457]
gi|256045678|ref|ZP_05448556.1| transporter [Brucella melitensis bv. 1 str. Rev.1]
gi|256263013|ref|ZP_05465545.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 2 str. 63/9]
gi|260562979|ref|ZP_05833465.1| calcium-binding EF-hand protein [Brucella melitensis bv. 1 str.
16M]
gi|265992099|ref|ZP_06104656.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|225641870|gb|ACO01784.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis ATCC 23457]
gi|260152995|gb|EEW88087.1| calcium-binding EF-hand protein [Brucella melitensis bv. 1 str.
16M]
gi|263003165|gb|EEZ15458.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|263092886|gb|EEZ17061.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 2 str. 63/9]
gi|326410072|gb|ADZ67137.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis M28]
gi|326539788|gb|ADZ88003.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis M5-90]
Length = 231
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---IITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP F + S + + G +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGGPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 135 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|49473777|ref|YP_031819.1| hypothetical protein BQ00970 [Bartonella quintana str. Toulouse]
gi|49239280|emb|CAF25603.1| hypothetical protein BQ00970 [Bartonella quintana str. Toulouse]
Length = 230
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 130/224 (58%), Gaps = 4/224 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLGK--G 65
+ +++L I VF+QLR VLGK+ G EKP +SG+ E I++
Sbjct: 4 NIVLVLALVIMVVVFVQLRNVLGKRIGFEKPPFDPYSGRSKKQTETETADNIVSFPHQGN 63
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+K++ I+ + P G+ LN+ +R + F P+ F+ A+ +YE IV +F +G
Sbjct: 64 SQKNDFSEIDAISPKGSALNEGLRALRQSDPHFSPQFFIKGAQVAYEMIVTAFAKGDRDQ 123
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
++KL+ V++ F ++ R+ N + V+ + VGI+ ++ + A++++N ++T+RIV + I
Sbjct: 124 LKKLLSQNVFESFCAAIEQREKNNERVQFTFVGINKIEFVAAAMQDNEEFLTVRIVSEMI 183
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
SA+Y++ LI DP+ ++ D+WTFV N S+PNW L +T+
Sbjct: 184 SATYNEQEELIDGDPDAIVEIRDVWTFVHNSLSSDPNWKLFATE 227
>gi|254500164|ref|ZP_05112315.1| Tim44-like domain family [Labrenzia alexandrii DFL-11]
gi|222436235|gb|EEE42914.1| Tim44-like domain family [Labrenzia alexandrii DFL-11]
Length = 245
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 130/228 (57%), Gaps = 17/228 (7%)
Query: 22 FVFLQLRGVLGKKTGNEKP----------FSGFFSGK------YVFSKRDERGIITLGKG 65
F+ +LR VLGK+TG E+P +G +G+ ++ G +
Sbjct: 18 FILFRLRSVLGKRTGEERPPFDPYSKPEQQNGQANGQDNVIPLPHQGQQSPEGYDDMAPA 77
Query: 66 KKKDNLDS-INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+++++ + I+++ P G+ LN ++ I+SV F+P+ F+ A+ +YE IV +F +G
Sbjct: 78 RQEEDGEVVIDKVAPAGSALNNALKQILSVDRSFEPEPFIQGAKAAYEMIVMAFADGDKK 137
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
A++ L+ V++ F+ ++ R+ + ++S+ VGID +I+ A++++ T +T+RI Q
Sbjct: 138 ALKNLLSRDVFEGFSAAIDDREKRGETIESTFVGIDKAEIVEAALKDTTAQVTVRIHSQL 197
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
ISA+ DK ++ DP +VIDIWTF R+ +PNW L++T+ E
Sbjct: 198 ISATRDKGGEVVDGDPAKVTEVIDIWTFARDTATRDPNWKLVATESAE 245
>gi|297247302|ref|ZP_06931020.1| hypothetical protein BAYG_00201 [Brucella abortus bv. 5 str. B3196]
gi|297174471|gb|EFH33818.1| hypothetical protein BAYG_00201 [Brucella abortus bv. 5 str. B3196]
Length = 235
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 19 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 78
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 79 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 138
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 139 EGFVAAIDEREKWGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 198
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 199 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 232
>gi|294851303|ref|ZP_06791976.1| hypothetical protein BAZG_00203 [Brucella sp. NVSL 07-0026]
gi|294819892|gb|EFG36891.1| hypothetical protein BAZG_00203 [Brucella sp. NVSL 07-0026]
Length = 235
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 123/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG +TGNEKP ++ S + + +++L + + + +I+
Sbjct: 19 AVIIFLQLRNVLGCRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 78
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 79 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 138
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 139 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 198
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 199 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 232
>gi|256258462|ref|ZP_05463998.1| calcium-binding EF-hand [Brucella abortus bv. 9 str. C68]
gi|260884773|ref|ZP_05896387.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
gi|260874301|gb|EEX81370.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
Length = 231
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +
Sbjct: 135 EGFVAAIDEREKWGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|148559170|ref|YP_001259879.1| hypothetical protein BOV_1994 [Brucella ovis ATCC 25840]
gi|148370427|gb|ABQ60406.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 231
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 123/214 (57%), Gaps = 4/214 (1%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDRKVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS+ D+D +
Sbjct: 135 EGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSILDRDGKV 194
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I DP+ ++ D+WTF R+ +PNW L++T+
Sbjct: 195 IDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATE 228
>gi|114706069|ref|ZP_01438972.1| Calcium-binding EF-hand [Fulvimarina pelagi HTCC2506]
gi|114538915|gb|EAU42036.1| Calcium-binding EF-hand [Fulvimarina pelagi HTCC2506]
Length = 229
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 23/233 (9%)
Query: 19 ITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---------IITLGKGKKK 68
+ V QL VLG++TGNE+P F + + RD G ++TL +
Sbjct: 1 MAAIVLFQLYNVLGRRTGNERPPFDPYTRNR----SRDRSGESEDAAGDNVVTLPNRRAN 56
Query: 69 D-NLD--------SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
D N D I+ + GT LNK +R I +FDPK+FL A+ +YE +VD+F
Sbjct: 57 DRNEDVPAGVRYAEIDRVSETGTPLNKELRKIKDADPNFDPKEFLEGAKIAYEMVVDAFA 116
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G + + L+ VY+ F +++TR+ + + ++SS +GIDD KI++A + +TIR
Sbjct: 117 QGDRNTLRNLLSPDVYEGFEAAIATREESGETMRSSFIGIDDAKIVSAELRGREALVTIR 176
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IV + ISA+ + + ++ D E +V DIWTF R+ +PNW L+ T+ E
Sbjct: 177 IVSEMISATLNSNGDVLDGDMETVVEVRDIWTFGRDTKSRDPNWKLVGTESEE 229
>gi|240849776|ref|YP_002971164.1| putative translocase transmembrane protein [Bartonella grahamii
as4aup]
gi|240266899|gb|ACS50487.1| putative translocase transmembrane protein [Bartonella grahamii
as4aup]
Length = 230
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 130/223 (58%), Gaps = 5/223 (2%)
Query: 12 LILLFAFITFFV-FLQLRGVLGKKTGNEKPFSGFFS--GKYVFSKRDERGIITL--GKGK 66
+IL+ A + V F+QLR VLGK+ G EKP +S K I++ K
Sbjct: 5 VILVIALVVMVVIFVQLRNVLGKRIGFEKPPFDPYSRRSKKQVEAETADNIVSFPHQKNS 64
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+KD+ I+++ P G+ LNK +R++ + F P+ F+ A+ +YE IV +F +G + +
Sbjct: 65 QKDDFSEIDKISPEGSILNKNLRELHKIDPQFSPQFFIKGAQIAYEMIVTAFAKGDRNQL 124
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ L+ V++ F ++ R+ N++ ++ + VGI+ ++ + A+I+E +TIRIV + IS
Sbjct: 125 KSLLCQDVFESFCTAIEQREKNKERIEFTFVGINKIEFVAAAIQEKDELLTIRIVSEMIS 184
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+Y++ I DP+ ++ DIWTFVRN S+PNW L +T+
Sbjct: 185 VTYNEQGERIDGDPDAIVEIRDIWTFVRNSLSSDPNWKLFATE 227
>gi|92115749|ref|YP_575478.1| import inner membrane translocase, subunit Tim44 [Nitrobacter
hamburgensis X14]
gi|91798643|gb|ABE61018.1| import inner membrane translocase, subunit Tim44 [Nitrobacter
hamburgensis X14]
Length = 234
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 10/229 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + +D+ + G
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDRATREVLHGTQDKNVVPMAGPVIDQA 61
Query: 65 -----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
D L GT L + I + + FDPK F++ AR++YE IV +F
Sbjct: 62 SSAPTADAASTPDRWKNLAEPGTPLALGLDAIAAHDSSFDPKHFISGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ S VY+ F+ ++ R+ E+ ++ V ID +++I A + ++ +T+R
Sbjct: 122 NGDRRTLKDLLSSDVYESFDAAIKDREKLEQKTETRFVSIDKVELIGAELRDSAEQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ Q IS + DK ++ +PE + D+WTF R+IP +PNW L+ T
Sbjct: 182 FISQMISMTRDKTGAIVDGNPEKISDITDVWTFARDIPSRDPNWKLVGT 230
>gi|90420989|ref|ZP_01228893.1| conserved hypothetical protein, Tim44 domain [Aurantimonas
manganoxydans SI85-9A1]
gi|90334767|gb|EAS48543.1| conserved hypothetical protein, Tim44 domain [Aurantimonas
manganoxydans SI85-9A1]
Length = 238
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 17/234 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG----IITLGKGK 66
F + F + V QLR VLGK+TGNE+P +S + + RD+ ++TL +
Sbjct: 3 FGTIFFIIVAAIVLFQLRSVLGKRTGNERPPFDPYSRRD--APRDDAARNDNVVTLPNRR 60
Query: 67 KKDNLD-----------SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV 115
++ +I+++ GT +N +R I FDPK+FL+ A+ +YE IV
Sbjct: 61 GGTEIEGEAAPAATPYEAIDKVAKPGTPVNAELRRIRDADPSFDPKEFLDGAKVAYEMIV 120
Query: 116 DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY 175
+F +G ++ L+ VYQ F ++S R+ ++ ++ S VGIDD I+ A ++
Sbjct: 121 TAFADGDRKLLKNLLSPDVYQGFEQAISEREQRDERMQFSFVGIDDATIVGAEQKDREAM 180
Query: 176 ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+T+RIV Q ISA D ++ D E +V D+WTF R+ +PNW L T+
Sbjct: 181 VTLRIVAQVISAVVKPDETVVDGDLETVVEVKDVWTFARDTRSRDPNWKLAGTE 234
>gi|319406501|emb|CBI80142.1| Tim44 domain protein [Bartonella sp. 1-1C]
Length = 230
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 24 FLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFP 79
F+QLR VLGK+ G EKP +SG+ K D+ + +K + I+ + P
Sbjct: 18 FVQLRNVLGKRVGFEKPPFDSYSGYTKKPIEVEKNDKIVSLPDQSSSQKGDFSEIDAIAP 77
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
G++LN +R I F P+ F+N + YE I+ +F +G + +++ + S V++ F
Sbjct: 78 EGSKLNSGLRSIRQFDPSFSPQFFVNGVQIVYEIIMTAFAQGDRNRLKEHLSSDVFESFC 137
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
+++ R+ N + ++ + VGI ++ I A +++ +T+RI+ + ISA+Y++ I +
Sbjct: 138 EAIELREKNNERIQFTFVGISKIEFIAAEMQKEEALLTVRIISEMISATYNEQEECIEGN 197
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
PE ++ DIWTF+RNI NPNW L +T+
Sbjct: 198 PEAIIEIRDIWTFIRNITSKNPNWKLFATE 227
>gi|319403587|emb|CBI77169.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 230
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 26 QLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIG 81
QLR VLGK+ G EKP +SG+ K D+ + +K + I+ + G
Sbjct: 20 QLRNVLGKRIGFEKPPFDSYSGYTKKPVEVEKNDKIVSLPDQSSSQKSDFSEIDAIASEG 79
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
++LN +R I F P+ F+N + YE I+ +F +G + +++ + S V++ F ++
Sbjct: 80 SKLNSGLRSIRQFDPSFSPQFFVNGVQIVYEIIMTAFAQGDRNQLKEHLSSDVFESFCEA 139
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+ R+ N + ++ + VGI ++ I A +++ ++T+RIV + ISA+Y++ I +PE
Sbjct: 140 IELREKNNERIQFTFVGISKIEFIAAEMQKEEAFLTVRIVSEIISATYNEQEECIEGNPE 199
Query: 202 IFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ DIWTFVRNI NPNW L +T+
Sbjct: 200 AIIEIRDIWTFVRNITSKNPNWKLFATE 227
>gi|75674306|ref|YP_316727.1| hypothetical protein Nwi_0107 [Nitrobacter winogradskyi Nb-255]
gi|74419176|gb|ABA03375.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 234
Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 16/232 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + +D + G
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDRATREVLGGTQDNNVVPVPGTVINQS 61
Query: 65 --------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
G D S+ E GT L + I + + FDP FL+ AR++YE IV
Sbjct: 62 SAAPSADVGGAADRWKSVAEP---GTPLALGLDAIAAQDSSFDPAHFLSGARSAYEMIVL 118
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F G ++ L+ S VY+ F+ ++ R+ E+ ++ V ID +++I A + + +
Sbjct: 119 AFANGDRRTLKDLLSSDVYESFDAAIKDRERLEQKTETRFVSIDKVELIGAEVRDGAEQL 178
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
T+R + Q IS + DK ++ +PE + D+WTF R+I +PNW L+ T
Sbjct: 179 TVRFISQMISVTRDKTGAIVDGNPEKISDITDVWTFARDISSRDPNWKLVGT 230
>gi|146337371|ref|YP_001202419.1| hypothetical protein BRADO0204 [Bradyrhizobium sp. ORS278]
gi|146190177|emb|CAL74169.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 233
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERGIITLGK---- 64
D ++F + F+FL+LR VLG++TG+E+ PF + + D + G
Sbjct: 2 DIYTIIFLGLAVFIFLRLRSVLGQRTGSERTPFD--RTARNAVGAPDNHVMPVPGAPLDP 59
Query: 65 ----------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G D I E GT L + + I + FDP+ FL AR++YE I
Sbjct: 60 AGPSTGAADFGAPSDRWRGIAE---PGTPLARGLDAIAANDASFDPRHFLTGARSAYEMI 116
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
V +F G A+ L+ S VY F+ + R+ NE+ ++ V ID +++NA + T
Sbjct: 117 VLAFANGDRRALRDLLSSEVYDSFDAVIKDREKNEQKTETRFVSIDTAELVNAEARDRTA 176
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+T+R V Q IS + DK ++ +P+ + DIWTF R+ +PNW L+ T
Sbjct: 177 QLTVRFVSQMISVTRDKTGNIVDGNPDKVADITDIWTFARDTGSRDPNWKLVGT 230
>gi|90421823|ref|YP_530193.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB18]
gi|90103837|gb|ABD85874.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB18]
Length = 233
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG+KTGNE+P + V +D + +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQKTGNERPPFDRAARDVVRGAQDNVVPLPGAVVDQAP 61
Query: 70 NLDSINELFPI---------GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
S + + P GT L + + IV+ + FDP+ FL AR +YE IV +F
Sbjct: 62 QTPSADVVPPTDRWKGVAEPGTPLAQGLNAIVAQDSSFDPQHFLTGARGAYEMIVLAFAN 121
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G A++ L+ VY F + R+ E+ ++ V ID ++++A + +T+R
Sbjct: 122 GDRRALKDLLSPEVYDSFEAVIREREKQEQKTETRFVSIDKAELVSAEARDRAAQLTVRF 181
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
V Q I+ + DK ++ +P+ + D+WTF R++ +PNW L+ T
Sbjct: 182 VSQMITVTRDKTGAIVDGNPDKVADITDVWTFARDVGSRDPNWKLVGT 229
>gi|163757477|ref|ZP_02164566.1| hypothetical protein HPDFL43_18742 [Hoeflea phototrophica DFL-43]
gi|162284979|gb|EDQ35261.1| hypothetical protein HPDFL43_18742 [Hoeflea phototrophica DFL-43]
Length = 234
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 118/215 (54%), Gaps = 7/215 (3%)
Query: 22 FVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD---ERGIITLGK----GKKKDNLDSI 74
VF+QLR VLGK+TG+E+P + +D + ++TL + + D ++
Sbjct: 17 IVFIQLRAVLGKRTGHERPPREQMERRDQTDAQDGIDDPKVVTLPRRGREAAEPDAFAAV 76
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
+ G+ LNK +R++V F+PK+F+ A +YE IV ++ +G ++ L+ V
Sbjct: 77 DAYAEPGSDLNKGLRELVKADPSFNPKEFVGGATMAYEMIVSAYADGDRKTLKSLLSREV 136
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNL 194
+ F ++ R++ + V+S+ VGI+ II A ++ +T+RI+ Q ISA+ DKD
Sbjct: 137 FDGFVSAIDEREARGETVRSNFVGIEKANIIQAEMKGTEANVTLRIISQLISATLDKDGE 196
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ D V D+WTF R+ +PNW LI+T+
Sbjct: 197 VVEGDLVEVTDVNDVWTFTRDTRSRDPNWRLIATE 231
>gi|163867402|ref|YP_001608597.1| hypothetical protein Btr_0112 [Bartonella tribocorum CIP 105476]
gi|161017044|emb|CAK00602.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 230
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 127/223 (56%), Gaps = 5/223 (2%)
Query: 12 LILLFAFITFFV-FLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE--RGIITLGKGK-- 66
+IL+ A + V F+QLR VLGK+ G EKP +S + E I++ K
Sbjct: 5 VILVIALVVMVVIFVQLRSVLGKRIGFEKPPFDPYSRRSKKQTEAETTENIVSFPHQKNL 64
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+K + I+E+ P G+ LN+ +R + + F P+ F+ A+ +YE IV +F +G +
Sbjct: 65 QKGDFSEIDEIAPEGSILNENLRALRRIDPHFSPQSFIKGAQIAYEMIVTAFAKGDRSQL 124
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ L+ V++ F + R+ N++ ++ + VGI+ ++ ++A+I+E +TIRI+ + IS
Sbjct: 125 KSLLCQDVFESFCAVIEQREKNKERIEFTFVGINKIEFVSAAIQEKDELLTIRIISEMIS 184
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+Y++ I +P+ ++ DIWTFVRN +PNW L +T+
Sbjct: 185 VTYNEQGERIDGNPDAIVEIRDIWTFVRNSLSPDPNWKLFATE 227
>gi|85714085|ref|ZP_01045074.1| hypothetical protein NB311A_08013 [Nitrobacter sp. Nb-311A]
gi|85699211|gb|EAQ37079.1| hypothetical protein NB311A_08013 [Nitrobacter sp. Nb-311A]
Length = 234
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 10/229 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + +D+ + G
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDGATREILRGAQDKNVVPVPGTVINQS 61
Query: 65 -----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ D +L GT L + I + + FDP FL+ AR++YE IV +F
Sbjct: 62 SATPTADVGPSADRWKDLTEPGTALALGLDAIAAQDSSFDPGHFLSGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ S VY+ F+ ++ R+ E+ ++ V ID +++I A + + +T+R
Sbjct: 122 NGDRRTLKDLLSSDVYESFDAAIKDRERLEQKTETRFVSIDKVELIGAELRDGAEQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ Q IS + DK ++ +PE + D+WTF R I +PNW L+ T
Sbjct: 182 FISQMISVTRDKTGAIVDGNPERISDITDVWTFAREISSRDPNWKLVGT 230
>gi|316931716|ref|YP_004106698.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
gi|315599430|gb|ADU41965.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
Length = 258
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 123/233 (52%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL-GKGKKK 68
D ++F + F+FL+LR VLG++TGNE+P + + + S + + +I++ G +
Sbjct: 25 DIYTIIFLALAVFIFLRLRNVLGQRTGNERPPFDRAAARDMISGKQDNNVISMPGTVIDQ 84
Query: 69 DNLDSINELFPIGTR----------LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ ++ P R L + I + FD + F++ A+++YE IV +F
Sbjct: 85 APIAPNADVVPPSDRWKGIAEPDSELEHGLNAIAQHDSSFDARHFVDGAKSAYEMIVMAF 144
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G ++ L+ S VY+ F+ ++ R+ N+ V+S V I+ ++I+A + + T +T+
Sbjct: 145 ANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVESRFVAIEKAELISAELRDRTAMLTL 204
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ V Q ISA+ DK ++ P+ + D+WTF R+ +PNW L+ T G
Sbjct: 205 KFVSQMISATRDKTGAVVDGSPDKVTDITDVWTFARDTSSRDPNWKLVGTGSG 257
>gi|91974901|ref|YP_567560.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB5]
gi|91681357|gb|ABE37659.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB5]
Length = 235
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 19/238 (7%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERGIITLG----K 64
D ++F + F+FL+LR VLG++TG+E+P F + + K+D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDNNVVPMPGTVIDQ 61
Query: 65 GKKKDNLDSINEL----------FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
N D + P+ LN V+ S FD FL A+++YE I
Sbjct: 62 SPTAPNADVVPPSDRWKGIAEPDSPLAHGLNAVLVQDSS----FDANHFLTGAKSAYEMI 117
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
V +F G A+ L+ + VY F+ ++ R+ NE+ ++ V ID +++ A + E+T
Sbjct: 118 VMAFANGDRRALRDLLSTEVYDSFDAAIKDREKNERKTETRFVAIDKAELLGAEVREHTA 177
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+T++ V Q IS + DK ++ +P+ + D+WTF R+I +PNW L+ T G
Sbjct: 178 QLTVKFVSQMISVTRDKAGAIVDGNPDKVADITDVWTFARDISSRDPNWKLVGTGSGH 235
>gi|115522403|ref|YP_779314.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisA53]
gi|115516350|gb|ABJ04334.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisA53]
Length = 233
Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 23/239 (9%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD------ERGIITLG 63
D ++F + F+FL+LR VLG++TG+E+P Y + RD E ++ +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGDERP-------PYDRAARDLLRGSQEGNVVPMP 54
Query: 64 KGKKKDNLDSINELFPIGTRLNKV----------MRDIVSVYTDFDPKDFLNEARNSYEA 113
L ++ P R V + I + + FD + FL+ AR +YE
Sbjct: 55 SPSIDPTLAPSADVTPPSDRWKSVAAPDSPLEHGLNAIAAHDSGFDAQHFLSGARGAYEM 114
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
IV +F G A++ L+ S VY F ++ R+ N+ ++ V ID +++ A + + +
Sbjct: 115 IVLAFANGDRRALKDLLSSEVYDSFEAAIREREKNDHKTETRFVSIDKAELVTAEVRDRS 174
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+T+R V Q I+ + DK ++ +P+ + D+WTF R++ +PNW L+ T G+
Sbjct: 175 AQLTVRFVSQMITVTRDKTGAIVDGNPDKVADITDVWTFARDVASRDPNWKLVGTGSGQ 233
>gi|121602069|ref|YP_989543.1| Tim44 domain-containing protein [Bartonella bacilliformis KC583]
gi|120614246|gb|ABM44847.1| Tim44 domain protein [Bartonella bacilliformis KC583]
Length = 230
Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 125/227 (55%), Gaps = 10/227 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR----DERGIITLGKG 65
D + ++ + VF+QLR VLGK+TG E+P +SG SK+ D G IT
Sbjct: 4 DVVFVIALVVMVIVFVQLRNVLGKRTGFERPPFNPYSGH---SKKQVEADTTGDITSFPQ 60
Query: 66 K---KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ +K + I+ + P G+ LN +R I + F P+ F+N + +YE I+ +F +G
Sbjct: 61 QINAQKGDFSDIDAIAPKGSALNDGLRAIRQADSSFSPQFFINGVQVAYEMIMTAFAQGN 120
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+++L+ V++ F ++ R+ + ++ + VGI+ ++ I A +++ +T+RIV
Sbjct: 121 RDQLKELLSQNVFESFCKAIEQREKRNERIQFTFVGINKVEFIAAEMQKREELLTVRIVS 180
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ IS Y++ I DPE ++ D+WTFVR+ NPNW L +T+
Sbjct: 181 EIISVIYNEQEERIDGDPEAIVEIRDVWTFVRDSVSKNPNWKLFATE 227
>gi|319405014|emb|CBI78623.1| Tim44 domain protein [Bartonella sp. AR 15-3]
Length = 230
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 4/206 (1%)
Query: 28 RGVLGKKTGNEKPFSGFFS--GKYVFSKRDERGIITL--GKGKKKDNLDSINELFPIGTR 83
R VLGK+ G EKP +S K + I++L KK+N IN + P +
Sbjct: 22 RNVLGKRIGFEKPPFDSYSKHSKKQIERETSDNIVSLPDQSSSKKNNFSEINTIAPEKSA 81
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
LN +R I + F P+ F+N + YE I+ +F +G +++ + S V++ F +++
Sbjct: 82 LNSGLRAISLADSSFSPQFFINGVQIVYEIIMTAFAQGNRDQLKEHLSSDVFESFCEAIE 141
Query: 144 TRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
R+ N + ++ + VGI+ ++ I A +++ ++T+RIV + ISA+Y++ I DPE
Sbjct: 142 QREKNNERIQFTFVGINKIEFIAAEMQKEEAFLTVRIVSEIISATYNEREEYIDGDPEAI 201
Query: 204 GKVIDIWTFVRNIPPSNPNWVLISTK 229
++ DIWTFVRN NPNW L +T+
Sbjct: 202 IEIRDIWTFVRNTTSKNPNWKLFATE 227
>gi|254472289|ref|ZP_05085689.1| import inner membrane translocase, subunit Tim44 [Pseudovibrio sp.
JE062]
gi|211958572|gb|EEA93772.1| import inner membrane translocase, subunit Tim44 [Pseudovibrio sp.
JE062]
Length = 248
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 132/241 (54%), Gaps = 21/241 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKR-----DERGIITL- 62
D ++F +FL+LR VLG +TGNE+ PF + + + S++ +E +I L
Sbjct: 6 DVYNIIFLIAAVVIFLRLRSVLGNRTGNERQPFDPYSAQQKQDSQKTQAPENEDNVIPLP 65
Query: 63 -----------GKGKKKDNLDS-INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNS 110
+ + ++ +++ I+++ GT LN +R+I F+PK+F+ AR +
Sbjct: 66 GSEHVHHDPERAEREAREQIEAEIDKVAKKGTDLNHGLREIWKAEPSFNPKEFVEGARGA 125
Query: 111 YEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA--S 168
YE I+ SF +G ++ L+ V+ F+ ++ R+S + V+S+ VGID I+ A +
Sbjct: 126 YEIILMSFAQGDRRTLKDLLSPEVFTGFSAAIDDRESRNERVESTFVGIDKADIVEAVFN 185
Query: 169 IEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+++ +T+R Q I+A+ D +N ++ DP ++ DIWTF R ++PNW L++T
Sbjct: 186 QKDSLAEVTVRFKSQLITATRDSENRIVDGDPTAVSELTDIWTFARVTGVNDPNWKLVAT 245
Query: 229 K 229
+
Sbjct: 246 E 246
>gi|148251774|ref|YP_001236359.1| hypothetical protein BBta_0156 [Bradyrhizobium sp. BTAi1]
gi|146403947|gb|ABQ32453.1| hypothetical protein BBta_0156 [Bradyrhizobium sp. BTAi1]
Length = 233
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 16/232 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRD----------ERG 58
D ++F + F+F++LR VLG++TG+E+ PF + + +
Sbjct: 2 DIYTIIFLALAVFIFVRLRAVLGQRTGSERTPFDRAARNAVQGAPDNHVMPVPGAPLDPA 61
Query: 59 IITLGK--GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
+ T G G D + E GT L + + +V+ FDP+ FL AR++YE IV
Sbjct: 62 VATAGAEPGVPSDRWRGVAEP---GTPLARGLDAVVANDPSFDPRHFLTGARSAYEMIVL 118
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F G A+ L+ S VY F+ + R+ +E+ ++ V ID ++++A + + T +
Sbjct: 119 AFANGDRRALRDLLSSEVYDSFDAVIKDREKHEQKTETRFVSIDTAELVSADLRDRTAQL 178
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
T+R V Q IS + DK ++ +P+ + DIWTF R+ +PNW L+ T
Sbjct: 179 TVRFVSQMISVTRDKMGNIVDGNPDKVADITDIWTFARDTGSRDPNWKLVGT 230
>gi|298293768|ref|YP_003695707.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
gi|296930279|gb|ADH91088.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
Length = 241
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 123/238 (51%), Gaps = 20/238 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKG 65
D ++F + F+F++LR VLG++TG E+P +S K D+ +++
Sbjct: 3 DIYTIIFLALAVFIFIRLRSVLGQRTGRERPPYDPYSRRDPAKAPAGPADK--VVSFPGA 60
Query: 66 KKKDNLDSINE--------------LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY 111
+K ++ E + +G+ + + I + FD + FL AR +Y
Sbjct: 61 AEKPSVPEPAEATESDEPAPARWAGVAEVGSAVANGLDAIAAQERGFDAQHFLTGARAAY 120
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
E IV +F G A+++L+ V++ F+ +++ R+ + +++ VGI+ ++II A ++
Sbjct: 121 EMIVVAFANGDRAALKELLAREVFEGFSAAIAEREQRGEKMETQFVGIEKVEIIEAGVKG 180
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ +T+R + Q IS + DK +I DPE V D+WTF R + +PNW L++T+
Sbjct: 181 RSAQMTLRFLSQLISVTRDKAGRVIDGDPEQVADVTDVWTFARELGTRDPNWKLVATE 238
>gi|13473820|ref|NP_105388.1| hypothetical protein mlr4544 [Mesorhizobium loti MAFF303099]
gi|14024571|dbj|BAB51174.1| mlr4544 [Mesorhizobium loti MAFF303099]
Length = 211
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 12/210 (5%)
Query: 30 VLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITL------GKGKKKDNLDSINELFP 79
+LG++TG+E+P +S + K K + +++L G+ D +I+
Sbjct: 1 MLGRRTGSERPPFDPYSAARTDKDATQKPE--NVVSLPRKRLPGEPAPADAYTAIDAFAK 58
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T LNK +R I FDPK F++ A+ +YE IV ++ +G ++ L+ V+ F
Sbjct: 59 PDTDLNKGLRAIKDNDPSFDPKGFVDGAKMAYEMIVMAYADGDRKTLKNLLSREVFDGFV 118
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
++ R++ + ++SS VGID I++A ++ ++T+RI+ + ISA+ DK +I D
Sbjct: 119 AAIGEREAKSEKIQSSFVGIDKADIVSAEMKGGEAHVTLRIISELISATRDKAGTVIDGD 178
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
PE +V D+WTF R+ +PNW LI+T+
Sbjct: 179 PETVAEVKDVWTFARDTRSRDPNWKLIATE 208
>gi|86747526|ref|YP_484022.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris HaA2]
gi|86570554|gb|ABD05111.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris HaA2]
Length = 235
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 11/230 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERGIITLGKGKKK 68
D ++F + F+FL+LR VLG++TG+E+P F + + K+D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDTNVVSMPGSVIDQ 61
Query: 69 DNLDSINELFPIGTR----------LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ ++ P R L + + + + FD FL+ A+ +YE IV +F
Sbjct: 62 SPIAPSADVVPPSDRWKGIAEPDSPLEHGLNAVFTQDSSFDANHFLSGAKGAYEMIVMAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A++ L+ S VY+ F ++ R+ NE ++ V I+ +++ A + ++ +T+
Sbjct: 122 ANGDRRALKDLLSSEVYESFEAAIKDREKNELKTETRFVAIEKAELLGAEVRDHVAQLTV 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ V Q IS + DK ++ P+ + D+WTF R+I +PNW L+ T
Sbjct: 182 KFVSQMISVTRDKAGAVVDGSPDKVADITDVWTFARDISSRDPNWKLVGT 231
>gi|192288736|ref|YP_001989341.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
gi|192282485|gb|ACE98865.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
Length = 235
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 119/233 (51%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERGIITLGKGKKK 68
D ++F + F+FL+LR VLG++TG+E+P F + + K+D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDNNVVSMPGTVIDQ 61
Query: 69 DNLDSINELFPIGTR----------LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ ++ P R L + I + FD + F+ A+++YE IV +F
Sbjct: 62 APMAPNADVVPPSDRWKGIAEPDSELEHGLNAIAQNDSSFDAQHFITGAKSAYEMIVMAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G ++ L+ S VY+ F+ ++ R+ N+ V++ V I+ ++I+A + + T +T+
Sbjct: 122 ANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVETRFVSIEKAELISAELRDRTAMLTL 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ V Q ISA+ DK ++ P+ + D+WTF R+ +PNW L+ T G
Sbjct: 182 KFVSQMISATRDKTGAVVDGSPDKVVDITDVWTFARDTSSRDPNWKLVGTGSG 234
>gi|319898295|ref|YP_004158388.1| hypothetical protein BARCL_0116 [Bartonella clarridgeiae 73]
gi|319402259|emb|CBI75797.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 230
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 28 RGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITL--GKGKKKDNLDSINELFPIG 81
R VLGK+ G EKP +SG+ + D I++L +K + I+ + P G
Sbjct: 22 RNVLGKRIGFEKPPFDSYSGYPKKQIEVETTD--NIVSLPDQSSSQKSDFSEIDAIAPEG 79
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+ LN +R I F P+ F+N + YE I+ +F +G +++ + S V++ F +
Sbjct: 80 SELNVSLRTIRQFDPSFSPRFFMNGVQIVYEMIMTAFAQGDRVKLKEHLSSDVFESFCAA 139
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+ R+ N + ++ + VGI+ ++ I A +++ ++T+RIV + ISA+Y++ I +PE
Sbjct: 140 IEQREKNNERIQFTFVGINRIEFIAAEMQKKEAFLTVRIVSEMISATYNEQEECIDGNPE 199
Query: 202 IFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ DIWTFVRN +PNW L +T+
Sbjct: 200 AIIEIRDIWTFVRNTTSQSPNWKLFATE 227
>gi|209883544|ref|YP_002287401.1| import inner membrane translocase, subunit Tim44 [Oligotropha
carboxidovorans OM5]
gi|209871740|gb|ACI91536.1| import inner membrane translocase, subunit Tim44 [Oligotropha
carboxidovorans OM5]
Length = 234
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG++TG+E+P + S D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRITRDMARSGNDNNVVKMPGTTIDQT 61
Query: 70 NLDSINELFPIGTR----------LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
L + P R L + ++ + F+ + F++ A+++YE IV +F
Sbjct: 62 PLAPAADPIPAQDRWKGIAEPDTPLATGLDEVAAADPSFNAQHFVSGAKSAYEMIVQAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ + VY F + R+ + V++ ID +++A + + ++T+R
Sbjct: 122 SGDRRMLKDLLSAEVYDGFEAVIKGREQRGEKVETRFASIDKAALVSAGVRDRIAHLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
V Q I+ + DKD +I +PE V D+WTF R++ +PNW L+ T+ G
Sbjct: 182 FVSQMITVTRDKDGAVIDGNPEKLTDVTDVWTFSRDVSSRDPNWKLVGTESG 233
>gi|39933380|ref|NP_945656.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris CGA009]
gi|39653005|emb|CAE25747.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 289
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 119/233 (51%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERGIITLGKGKKK 68
D ++F + F+FL+LR VLG++TG+E+P F + + K+D + G +
Sbjct: 56 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDNNVVSMPGTVIDQ 115
Query: 69 DNLDSINELFPIGTR----------LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ ++ P R L + I + FD + F+ A+++YE IV +F
Sbjct: 116 APMAPNADVVPPSDRWKGIAEPDSELEHGLNAIAQNDSSFDAQHFITGAKSAYEMIVMAF 175
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G ++ L+ S VY+ F+ ++ R+ N+ V++ V I+ ++I+A + + T +T+
Sbjct: 176 ANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVETRFVSIEKAELISAELRDRTAMLTL 235
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ V Q ISA+ DK ++ P+ + D+WTF R+ +PNW L+ T G
Sbjct: 236 KFVSQMISATRDKTGAVVDGSPDKVVDITDVWTFARDTSSRDPNWKLVGTGSG 288
>gi|299133204|ref|ZP_07026399.1| import inner membrane translocase subunit Tim44 [Afipia sp. 1NLS2]
gi|298593341|gb|EFI53541.1| import inner membrane translocase subunit Tim44 [Afipia sp. 1NLS2]
Length = 234
Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 14/235 (5%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG++TG+E+P + + D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPYDRVTRDVAPTGNDNNVVRMPGTAVDQA 61
Query: 70 NLDSINELFPIGTR------------LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
L + P+ R L + + + F+ + F++ A+++YE IV +
Sbjct: 62 TLAPSAD--PVSPRERWKGIAAPDSELASGLDQVAAADPSFNAQHFISGAKSAYEMIVLA 119
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
F G ++ L+ S VY F + R+ + V++ ID ++++A + + ++T
Sbjct: 120 FANGDRRTLKDLLSSDVYDGFEAVIKGREQQGEKVETKFASIDKAELVSAGVRDKLAHLT 179
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+R V Q I+A+ DKD +I +PE V D+WTF R++ +PNW L+ T+ G
Sbjct: 180 VRFVSQMITATRDKDGAVIDGNPEKLTDVTDVWTFSRDVSSRDPNWKLVGTESGH 234
>gi|154245991|ref|YP_001416949.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
gi|154160076|gb|ABS67292.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
Length = 250
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR--DERGIITLGKGKK 67
D ++F + F+F++LR VLG++TG E+P +S + ++ + +
Sbjct: 17 DIYTIIFLALAVFIFVRLRSVLGQRTGRERPPYDPYSRDTARPPQPASDKVVPLPERPVS 76
Query: 68 KDNLDSINELFPI---------GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
++E P G+ + +I + DFD + FL AR +YE IV +F
Sbjct: 77 PPAASPVDEAPPAYRWEGVAQEGSATAAALDEIARIEPDFDARHFLTGARAAYEMIVTAF 136
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A++ L+ VY F +++ R+S + ++S V ++ ++ + ++ + + +T+
Sbjct: 137 AAGDRRALKDLLAKDVYDGFVSAIADRESRRETMESRFVAVEQAELQDVTVRDRSAQLTV 196
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
R V + IS + D ++ P+ V D+WTF R++ +PNW L++T+ +
Sbjct: 197 RFVSKLISVTRGPDGAVVDGSPDTVADVTDVWTFARDLGTRDPNWKLVATEAAQ 250
>gi|158426224|ref|YP_001527516.1| mitochondrial import inner membrane translocase [Azorhizobium
caulinodans ORS 571]
gi|158333113|dbj|BAF90598.1| mitochondrial import inner membrane translocase [Azorhizobium
caulinodans ORS 571]
Length = 279
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 122/237 (51%), Gaps = 16/237 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL----GKG 65
D ++F + F+F++LR VLG++TG E+P F+ + + + +++L G
Sbjct: 45 DIYTIIFLALAVFIFVRLRSVLGQRTGKERPPYDPFTPRPPAAPSSD-NVVSLPERVGDA 103
Query: 66 KKKDNLDSINELFP----------IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV 115
++ +++ P G+ L + + I ++ DFD K F+ A+++YE IV
Sbjct: 104 PQRPTA-PVSQPLPGTFRWKGVTEEGSPLAEALDQIAAIEPDFDAKHFVEGAKSAYEMIV 162
Query: 116 DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY 175
+F G ++ L+ V+ F ++S R+ + ++S V I+ +II AS+ T
Sbjct: 163 LAFAAGDRRTLKDLLSKDVFDGFVAAISEREGRGETMESRFVAIEKAEIIEASVRGRTGQ 222
Query: 176 ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+T+R V + ISA+ +D ++ + V D+WTF R + +PNW L++T+ +
Sbjct: 223 VTLRFVSKIISATRSRDGAVVDGSADTVADVTDVWTFARELGARDPNWKLVATEAAQ 279
>gi|304392739|ref|ZP_07374679.1| import inner membrane translocase, subunit Tim44 [Ahrensia sp.
R2A130]
gi|303295369|gb|EFL89729.1| import inner membrane translocase, subunit Tim44 [Ahrensia sp.
R2A130]
Length = 230
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D LL F+F +LR VLG + G EKP ++ ++TL K+ +
Sbjct: 2 DLFTLLPLLAAVFLFWKLRSVLGTRNGIEKPPYDPYTND---PNEAADNVVTLPGAKRAN 58
Query: 70 NLDS-----------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D+ I +L L + + I S FDP++FL R +YE IV F
Sbjct: 59 APDAEEDAGEAARKRIGKLAGKDKSLERGLLAIHSRDPGFDPEEFLQGGRMAYEMIVTGF 118
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G +E L+ VY+ F + R + V +S VGID I A + + IT+
Sbjct: 119 ADGDKRTLENLLSREVYESFATVIDERSERGEKVNASFVGIDKAVIEGAEVLRDEAQITV 178
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
R V + ISA+ D + +I D + +V D+WTF R + +PNW L++T
Sbjct: 179 RFVSEMISATLDSSDEVIEGDLQEVAEVTDVWTFARPVKSRDPNWKLVAT 228
>gi|83313642|ref|YP_423906.1| hypothetical protein amb4543 [Magnetospirillum magneticum AMB-1]
gi|82948483|dbj|BAE53347.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 281
Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+ FA + F+ L+LR VLGK+TG E+P ++ + ++ L ++
Sbjct: 72 IVFFAMVAAFLVLRLRSVLGKRTGAERP-----PEQWTPPEAAADNVVDLQSVRR----- 121
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
S +E P T + + + I + FD FL A+ ++E IV +F G ++ L+
Sbjct: 122 SASEP-PAETPMGQGLAAIRAADRGFDLDGFLGGAKAAFEMIVIAFAHGDKATLQPLLAP 180
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY+ F+D++ R+ + + +++ LVGI +++ A ++ +TIR V + ++A D
Sbjct: 181 DVYRHFSDAIDARRQHGETLQTELVGIRTAELVEAGMDGRFAALTIRFVSEQVNALRDAK 240
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ +PE VID+WTF R+ ++PNW L +T E
Sbjct: 241 GEVVEGNPERVIDVIDLWTFRRDTRSADPNWALAATHTPE 280
>gi|163850987|ref|YP_001639030.1| import inner membrane translocase subunit Tim44 [Methylobacterium
extorquens PA1]
gi|218529814|ref|YP_002420630.1| import inner membrane translocase subunit Tim44 [Methylobacterium
chloromethanicum CM4]
gi|240138118|ref|YP_002962590.1| hypothetical protein MexAM1_META1p1451 [Methylobacterium extorquens
AM1]
gi|254560680|ref|YP_003067775.1| hypothetical protein METDI2225 [Methylobacterium extorquens DM4]
gi|163662592|gb|ABY29959.1| import inner membrane translocase subunit Tim44 [Methylobacterium
extorquens PA1]
gi|218522117|gb|ACK82702.1| import inner membrane translocase subunit Tim44 [Methylobacterium
chloromethanicum CM4]
gi|240008087|gb|ACS39313.1| conserved hypothetical protein, putative membrane protein
[Methylobacterium extorquens AM1]
gi|254267958|emb|CAX23826.1| conserved hypothetical protein, putative membrane protein
[Methylobacterium extorquens DM4]
Length = 239
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 17/240 (7%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK------------PFSGFFSGKYV--F 51
DS D L+F + FV +LR VLG+KTG E+ P +G G V
Sbjct: 2 QDSFDATTLIFLALAVFVIWRLRSVLGQKTGTERSPFRPVERNRTEPPAGRGEGDNVVRL 61
Query: 52 SKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY 111
D + I E G+ + + + +V + F+P+ FL A+ +Y
Sbjct: 62 PGADRSPAGAAAVQTAARDWRGIAE---PGSAVARGLEQVVQLEPAFEPRAFLEGAKGAY 118
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
E IV +F +G + L+ V + F ++S R+ + +++ + ID +I ++
Sbjct: 119 ETIVTAFAKGDRKTLRALLSREVCEGFERAISEREKRNETAETTFISIDKAEIAAVEVKN 178
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
IT+R + I+A+ D D +I + E +V D+WTF R + +PNW L++T G
Sbjct: 179 RAAQITVRFLSNLITATRDADGKVIDGNAETGVEVPDVWTFARTLGSRDPNWQLVATDAG 238
>gi|170750111|ref|YP_001756371.1| import inner membrane translocase subunit Tim44 [Methylobacterium
radiotolerans JCM 2831]
gi|170656633|gb|ACB25688.1| import inner membrane translocase subunit Tim44 [Methylobacterium
radiotolerans JCM 2831]
Length = 237
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 114/235 (48%), Gaps = 9/235 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKR-DERGIITLG 63
DS D ++F + FV +LR VLG+KTG E+ PF + R D ++ L
Sbjct: 2 QDSFDVTTIIFLALAVFVIWRLRSVLGQKTGAERSPFKPVDRSRTEPQARSDGDNVVRLP 61
Query: 64 KGKKKDNLDSINE-------LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
+ + G+ + + + + FDP+ F+ A+++YEAI+
Sbjct: 62 GADRVQAAPPPAAAPRDWRGIAEPGSEVARGLEACIQAEPSFDPRAFIEGAKSAYEAIMI 121
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F +G + L+ V + F +++ R+ N + ++++ V ID +I+ + ++
Sbjct: 122 AFAKGDRKTLRGLLSKEVGEAFERAIAERERNRQTLETTFVSIDKAEIVAVEVRNRVAHV 181
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
T+R + I+A+ + D ++ E +V D+WTF R + +PNW L++T+ G
Sbjct: 182 TVRFLSNLITATRNADGKVVDGSAETVVEVPDVWTFARTLGSRDPNWQLVATEAG 236
>gi|188580934|ref|YP_001924379.1| import inner membrane translocase subunit Tim44 [Methylobacterium
populi BJ001]
gi|179344432|gb|ACB79844.1| import inner membrane translocase subunit Tim44 [Methylobacterium
populi BJ001]
Length = 242
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK------------PFSGFFSGKYV--F 51
DS D L+F + FV +LR VLG+KTG E+ P +G G V
Sbjct: 2 QDSFDATTLIFLALAVFVIWRLRSVLGQKTGTERSPFRPVERNRTEPPAGRGEGDNVVRL 61
Query: 52 SKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY 111
D + + + + + + +V V FDP+ FL A+ +Y
Sbjct: 62 PGADRAQAGAQAGTATQTATRDWRGIAEPNSAVARGLEQVVQVEPGFDPRAFLEGAKGAY 121
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
E IV +F +G + L+ V + F ++S R+ + +++ + ID +I ++
Sbjct: 122 ETIVTAFAKGDRKTLRALLSREVCEGFERAISEREKRRETAETTFISIDKAEIAAVEVKN 181
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
IT+R + I+A+ D D +I + E +V D+WTF R + +PNW L++T G
Sbjct: 182 RAAQITVRFLSNLITATRDADGKVIDGNAETGVEVPDVWTFARTLGSRDPNWQLVATDAG 241
>gi|46201691|ref|ZP_00054533.2| COG4395: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 219
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+ FA + F+ L+LR VLGK+TG E+P K+ + ++ L ++
Sbjct: 10 IVFFAMVAAFLVLRLRSVLGKRTGTERP-----PEKWSPVEAPADNVVDLQSVRR----- 59
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
S +E P T L + + I + FD FL A+ ++E IV +F G ++ L+
Sbjct: 60 SASEP-PAETPLGQGLAAIRAADRGFDLDGFLGGAKAAFEMIVIAFAHGDKATLQPLLAP 118
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY+ F++++ R+ + + +++ LVGI +++ A ++ +TI+ V + ++A D
Sbjct: 119 DVYRHFSEAIDARRQHGETLQTELVGIRSAELVEAGMDGRFAALTIKFVSEQVNALRDAK 178
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ +PE VID+WTF R+ +PNW L +T
Sbjct: 179 GEVVEGNPERVIDVIDLWTFRRDTRSPDPNWALTATH 215
>gi|217977326|ref|YP_002361473.1| import inner membrane translocase subunit Tim44 [Methylocella
silvestris BL2]
gi|217502702|gb|ACK50111.1| import inner membrane translocase subunit Tim44 [Methylocella
silvestris BL2]
Length = 239
Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 11/230 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---IITL--- 62
D ++FA + FV +LR +LG +TG EKP + F +G+ +KR G +I L
Sbjct: 6 DVSTIIFALLAAFVVWKLRSILGARTGTEKPPRNPFIAGEPSAAKRPGEGEGKVIPLPGA 65
Query: 63 -GKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ D + P G++ + I + F+ K FL A+ +YE IV F
Sbjct: 66 SAPIAQAAAADPSSRWKPHAEPGSKAWAGLDAIAAADRSFEIKSFLEGAKTAYEMIVIGF 125
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G ++ L+D VY F +L+ R+ +++S V ID+ I +A + I +
Sbjct: 126 ADGDRPMLQNLLDKSVYDSFVTALTEREKRGDKIETSFVAIDNGAIADAELNGRMAEIAV 185
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
R Q I+A+ + +I +PE ++ D W F R++ +PNW LIST
Sbjct: 186 RFSAQIITATRNAAGTVIEGNPEQVVEINDTWRFARDVGARDPNWRLIST 235
>gi|260429391|ref|ZP_05783368.1| transporter, Tim44 family [Citreicella sp. SE45]
gi|260420014|gb|EEX13267.1| transporter, Tim44 family [Citreicella sp. SE45]
Length = 219
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLGKGKKKDN 70
+L+ A I F+ L+LR VLG + G EKP + +KRD+R + G D
Sbjct: 8 LLVLAGIAIFLILRLRSVLGTRDGFEKPEA------PAPAKRDDRKRDFEVIEGGPDHDI 61
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
D + E P L K+ R + F+ +FL+ AR +YE I+ F G++ ++ +
Sbjct: 62 TDHVPENSPAAEALAKMKR----IEPSFNVTEFLSGARGAYEMILMGFDNGEIEDLKPFL 117
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQFISAS 188
+Y+ F+D + R V++ VG+ ++ +++AS +E IT++ VG+ S
Sbjct: 118 SDEIYETFSDVIEQRGQQGLTVEAEFVGVRELSLVDASFDETRQLAEITVKYVGELTSVV 177
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ ++ +P + D+WT+ RN+ +PNW L++T
Sbjct: 178 KNAAGEIVEGNPRTVKRQKDVWTYARNMGTDDPNWQLVAT 217
>gi|182680015|ref|YP_001834161.1| import inner membrane translocase subunit Tim44 [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182635898|gb|ACB96672.1| import inner membrane translocase subunit Tim44 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 260
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 20/242 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY--VFSKRDE----------- 56
D I++FA + F+ +LR VLG + GNE+P G++ +FS + +
Sbjct: 8 DMSIVIFALLAAFLIWKLRSVLGTRQGNEEPRDNSVPGQWPSLFSPKSQDPSQANKNGAP 67
Query: 57 -------RGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARN 109
R G + + + + + I F P FL AR+
Sbjct: 68 GQPTFPNRPSPAGASGAPAEAGRNWSAFVEPNSPAAAGLEAIAKADPAFAPGPFLEGARH 127
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+YE IV++F EG+ A+ L+ VY F +++ R+S V+ + V +D KI A++
Sbjct: 128 AYEMIVNAFAEGQRSALANLLVRDVYAGFEAAITERESQGHKVELTFVSLDAAKIEEAAL 187
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IT+R + I + D ++ P+ V D+WTF R I +PNW L +TK
Sbjct: 188 FHQIAEITLRYKAKMIKVTRDAQGAVVEGSPDHVVDVDDLWTFERMIGSQDPNWKLAATK 247
Query: 230 LG 231
G
Sbjct: 248 TG 249
>gi|170739669|ref|YP_001768324.1| import inner membrane translocase subunit Tim44 [Methylobacterium
sp. 4-46]
gi|168193943|gb|ACA15890.1| import inner membrane translocase subunit Tim44 [Methylobacterium
sp. 4-46]
Length = 238
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 17/240 (7%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKY-VFSKRDERGIITLG 63
DS D L+F + FV +LR VLG+KTG+E+P F+ + E ++ L
Sbjct: 3 QDSLDLTTLIFLGLAVFVIWKLRAVLGQKTGHERPPFNPLVRRREEPPPAAREDNVVRLP 62
Query: 64 KGKKKD----------NLDSINELFPIGTR-LNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
G + N + E R L+ V++ FDP+ F + A+ +YE
Sbjct: 63 AGGDRTAAAPVATVPRNWKGVVEPNSAAARGLDLVLQQ----EPGFDPRAFTDGAKIAYE 118
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
IV +F +G ++ L+ V + F ++ R+ ++V+++ V ID +I+ +
Sbjct: 119 TIVMAFAKGDRRTLKSLLSREVAEGFERAIQARERAGQSVETTFVSIDRAEIVGVDLRNR 178
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IT+R + + I+A+ + ++ P+ V D+WTF R + +PNW L++T+ G+
Sbjct: 179 VAQITVRYLSKLITATRNAQGAVVDGSPDTVVDVTDVWTFARTLGSRDPNWQLVATEAGQ 238
>gi|126724535|ref|ZP_01740378.1| import inner membrane translocase, subunit Tim44 [Rhodobacterales
bacterium HTCC2150]
gi|126705699|gb|EBA04789.1| import inner membrane translocase, subunit Tim44 [Rhodobacterales
bacterium HTCC2150]
Length = 236
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 10/228 (4%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F KM S +L+ A I F+ L+L+ VLG + G EKP + G+ S R + ++
Sbjct: 15 FTKMGSSMIQLLVLAGIAVFLILRLKNVLGTREGFEKPRAP--QGQAQQSNRPQLEVVEN 72
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G + I E I + + +I + +F ++FL A+ +YE I+ +F GK
Sbjct: 73 GPDQ------DIAEYVEIDSEAGMALAEIKAQDRNFTVQEFLGGAKGAYEMILIAFEGGK 126
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRI 180
+ +E + V + F + ++ R+ V ++ +G+ +M + +A+++ N +T++
Sbjct: 127 LSDVEPFLSEEVMESFVEVVADREDQGLTVTANFIGLREMAVHDATLDPITNIAEVTVKF 186
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
VG+ S ++ + ++ D + + DIWTF R++ NPNW L++T
Sbjct: 187 VGEMTSVVHNAEGEVVEGDEKTIKRQKDIWTFARDLGDDNPNWQLVAT 234
>gi|99082695|ref|YP_614849.1| import inner membrane translocase, subunit Tim44 [Ruegeria sp.
TM1040]
gi|99038975|gb|ABF65587.1| import inner membrane translocase subunit Tim44 [Ruegeria sp.
TM1040]
Length = 218
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP S + ++ +R +
Sbjct: 1 MESPLIELLVLAGIAVFLILRLKSVLGTREGFEKP--PLASSE---TRAPQRKFEVIEGS 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D + ++E G+ +K + D+ + F +F+ AR +YE I+ F G++
Sbjct: 56 PDDDIIAYVDE----GSPQSKALSDMKRSDSSFQVAEFVQGARGAYEMILMGFETGELDG 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQ 183
I+ + ++Q F D++S R+ +++ +G+ + II+A+ + +T IT+R VG+
Sbjct: 112 IQPFISDDIFQSFVDAVSAREDQGLTIEAEFIGVRETSIIDATFDTATSTAEITVRFVGE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
SA ++ ++ DP+ + D WTF R + +PNW+L++T
Sbjct: 172 LTSAVRNRAGEIVEGDPKAVKRQKDTWTFSRQMGTGDPNWLLVAT 216
>gi|260431955|ref|ZP_05785926.1| transporter, Tim44 family [Silicibacter lacuscaerulensis ITI-1157]
gi|260415783|gb|EEX09042.1| transporter, Tim44 family [Silicibacter lacuscaerulensis ITI-1157]
Length = 219
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 112/225 (49%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + + + R + G
Sbjct: 1 MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKPPVP----QQPAASKSRRDFEVIDGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D D + E I L + R V F +FL AR++YE IV F G +
Sbjct: 57 PDRDITDHVPEDSEIAQTLAAMKR----VEPSFSVSEFLQGARSAYEMIVMGFERGNLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + V++ F ++ R+ ++++ +G+ +M +++A +++T IT+R VG+
Sbjct: 113 IQPFLSEEVFETFVSVVAEREDKGLSIEAEFIGVREMALVDAQFDKDTNRAEITVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+D ++ +P + D WTF R + +PNW+L++T
Sbjct: 173 LTSVVRDRDGNIVEGNPNTIKRQKDSWTFARVMGADDPNWLLVAT 217
>gi|220921009|ref|YP_002496310.1| import inner membrane translocase subunit Tim44 [Methylobacterium
nodulans ORS 2060]
gi|219945615|gb|ACL56007.1| import inner membrane translocase subunit Tim44 [Methylobacterium
nodulans ORS 2060]
Length = 241
Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKP-FSGFFSGKYVFSKRDERG---IIT 61
DS D L+F + FV +LR VLG+KTGNE+P F+ + G ++
Sbjct: 2 QDSLDLTTLIFLGLAVFVIWKLRSVLGQKTGNERPPFNPLLRRREEPPPAPREGGDNVVR 61
Query: 62 LGKGKKKD------------NLDSINEL-FPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR 108
L N + E P L+ V++ S FDP+ F + A+
Sbjct: 62 LPGAGADRGAAAPVAATVPRNWKGVVEPNSPAARGLDLVLQQEPS----FDPRAFTDGAK 117
Query: 109 NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINAS 168
+YE IV +F +G ++ L+ V F ++ R+ + V+++ V ID +I+
Sbjct: 118 VAYETIVMAFAKGDRKTLKSLLSREVADGFERAIQARERAGQTVETTFVSIDRAEIVGVD 177
Query: 169 IEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ IT+R + + I+A+ + ++ P+ V D+WTF R + +PNW L++T
Sbjct: 178 VRNRVAQITVRFLSKLITATRNPQGAVVDGSPDTVVDVTDVWTFARTLGSRDPNWQLVAT 237
Query: 229 KLGE 232
+ G+
Sbjct: 238 EAGQ 241
>gi|312115344|ref|YP_004012940.1| import inner membrane translocase subunit Tim44 [Rhodomicrobium
vannielii ATCC 17100]
gi|311220473|gb|ADP71841.1| import inner membrane translocase subunit Tim44 [Rhodomicrobium
vannielii ATCC 17100]
Length = 233
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK-----GKK 67
ILL A + +FL+LR VLG++TG+E+ ++ + RD ++ L + G
Sbjct: 11 ILLLA-VAVAIFLRLRSVLGRRTGDEETRLDNYA-RDAAPTRD--NVVPLPRAEPRPGGA 66
Query: 68 KDNLDSINELF---PIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
S++E P + + +R I + FD F+N A+ +YE+I+ ++ +G
Sbjct: 67 PSAGPSVDERLGNVPADSAVRAPLRQIATSDPSFDTASFVNGAKIAYESIITAYAKGDRE 126
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
+ L+ V+ FN ++ R+++ + V+ +GI +I+ A + + +R V
Sbjct: 127 TLRHLLAPEVFDSFNVVINDREASGETVEFHFIGISSSEIVEAQLLGRVAQVKVRFVSDL 186
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++A+ DK ++ D + +V DIWTF R++ NPNW L++T
Sbjct: 187 VTATRDKHGEVVDGDDKAVRQVTDIWTFSRDVSSPNPNWQLVAT 230
>gi|146278709|ref|YP_001168868.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17025]
gi|145556950|gb|ABP71563.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17025]
Length = 219
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 115/225 (51%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP + R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPPVPLEDPR----PRPRREFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLTGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV--YITIRIVGQ 183
I + + V++ F D+++ R++ +V+++ +G+ ++ I AS E ++ I +R VG+
Sbjct: 113 IRPFLSAEVFESFEDAVNAREAEGLSVEANFLGLREIDIHEASFERDSRIGQIAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S +++ ++ P + D+WTF R++ ++PNW L++T
Sbjct: 173 LTSVVRNREGQVVEGSPTEIKRQRDVWTFERHMGANDPNWQLVAT 217
>gi|77464817|ref|YP_354321.1| hypothetical protein RSP_1239 [Rhodobacter sphaeroides 2.4.1]
gi|77389235|gb|ABA80420.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 219
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP K R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPAVPLEDPK----PRTRRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLTGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV--YITIRIVGQ 183
I + S V++ F +++ R++ +V+++ +G+ ++ I AS + +T + +R VG+
Sbjct: 113 IRPFLSSDVFESFEEAVKAREAEGLSVEATFLGLREIDIHEASFDRDTRVGQVAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + ++PNW L++T
Sbjct: 173 LTSVVRDRTGQVIEGSPTEVKRQRDVWTFERRMGANDPNWQLVAT 217
>gi|259417909|ref|ZP_05741828.1| import inner membrane translocase, subunit Tim44 [Silicibacter sp.
TrichCH4B]
gi|259346815|gb|EEW58629.1| import inner membrane translocase, subunit Tim44 [Silicibacter sp.
TrichCH4B]
Length = 218
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 119/226 (52%), Gaps = 13/226 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + + + + +I +G
Sbjct: 1 MESPLIELLVLAGIAVFLILRLKSVLGTREGFEKPP---LANNEAPAPQRKFEVI---EG 54
Query: 66 KKKDNLDS-INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
D++ + ++E G+ + + D+ + F +F+ AR +YE I+ F G++
Sbjct: 55 SPDDDIVAYVDE----GSPQAQALSDMKRADSSFQVAEFVQGARGAYEMILMGFETGELD 110
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVG 182
I+ + ++Q F D++S R+ +++ +G+ + I++A+ + +T +T+R VG
Sbjct: 111 GIQPFISEEIFQSFVDAVSAREDQGLTIEAEFIGVRETTIVDATFDAATSTAEVTVRFVG 170
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ SA ++ ++ DP+ + D WTF R + +PNW+L++T
Sbjct: 171 ELTSAVRNRAGEIVEGDPKAVKRQKDTWTFSRQMGTGDPNWLLVAT 216
>gi|144900161|emb|CAM77025.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Magnetospirillum gryphiswaldense MSR-1]
Length = 243
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 12/223 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE----RGIITLGKGKK- 67
I+ FA + F+ L+LR VLGK+TGNE+P ++ + +D+ +I L + ++
Sbjct: 10 IVFFAVVAVFLILRLRSVLGKRTGNEEP------PRWTRTPKDDGETADNVIDLTRARRP 63
Query: 68 -KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ D ++ L + I + F FL+ AR ++E IV +F G A+
Sbjct: 64 VEAEPDVTADVAATAGPLARGEAAIRARDPSFSNTGFLSGARMAFEMIVGAFAAGDKKAL 123
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
L+ +VY+ F D++ R + + + ++GI +II A + +T+R V + I+
Sbjct: 124 RPLLADQVYKPFCDAIDARARAGEELSTEIMGIKSAEIIEAIMVGTVAQVTVRFVSEQIN 183
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
D D ++ DP V D WTF R+ +PNW L +T+
Sbjct: 184 VIKDLDGRIVEGDPSRIVPVTDEWTFSRDTRSKDPNWHLSATR 226
>gi|84684638|ref|ZP_01012539.1| hypothetical protein 1099457000260_RB2654_13474 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667617|gb|EAQ14086.1| hypothetical protein RB2654_13474 [Rhodobacterales bacterium
HTCC2654]
Length = 219
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 12/226 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII-TLGK 64
M S +++ A I F+ L+LR VLG + G EKP + V D RG +
Sbjct: 1 MSSPIIQLIVLAAIAIFLILRLRDVLGTREGFEKPVVSRTESQRV----DNRGKFEVIEG 56
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G D D + + I + + + F DFLN AR +YE I+ +F G++
Sbjct: 57 GPDTDITDHVEDPASI-----EALAKMKGAERSFAVGDFLNGARGAYEMILMAFEAGELD 111
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI--EENTVYITIRIVG 182
I+ + VY+ F + R+ + + ++ VG+ +MK++ A E ITIR +G
Sbjct: 112 KIKPFLSDEVYESFATVVEQREKDGYKIDANFVGLREMKLVEAEFDDESREGEITIRFIG 171
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ S DK ++ +P + D+WTF R + NPNW L++T
Sbjct: 172 EITSVVRDKSGEIVEGNPTEVKRQKDVWTFARIMGSENPNWQLVAT 217
>gi|114762187|ref|ZP_01441655.1| transporter, Tim44 family protein [Pelagibaca bermudensis HTCC2601]
gi|114545211|gb|EAU48214.1| transporter, Tim44 family protein [Roseovarius sp. HTCC2601]
Length = 219
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE--RGIITLGKGKKKDN 70
+L+ A I F+ L+LR VLG + G EKP S S+RD+ R + G D
Sbjct: 8 LLVLAGIAIFLILRLRSVLGTRDGFEKPES------PSPSRRDDTARDFEVIEGGPDHDI 61
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+D + E P L K+ R F +FL+ AR +YE I+ F G++ ++ +
Sbjct: 62 IDHVPENSPAAEALAKMKR----AEPSFGVGEFLSGARGAYEMILMGFDNGEIEDLKPFL 117
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISAS 188
+Y+ F+D + R +++ VG+ ++ +++A+ + E IT++ VG+ S
Sbjct: 118 SDEIYETFSDVIEQRAQQGLTIEAQFVGVRELSLVDATFDDTERLAEITVKYVGELTSVV 177
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +I P + D+WT+ R + +PNW L++T
Sbjct: 178 KNAAGEVIEGSPTAVKRQKDVWTYARRMGSDDPNWQLVAT 217
>gi|163797060|ref|ZP_02191015.1| hypothetical protein BAL199_11141 [alpha proteobacterium BAL199]
gi|159177576|gb|EDP62129.1| hypothetical protein BAL199_11141 [alpha proteobacterium BAL199]
Length = 222
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 115/220 (52%), Gaps = 4/220 (1%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+L A + FV +LR VLG++TG+E+ + F+ + ++ G I + +++D
Sbjct: 6 IILLAMLAGFVIFKLRSVLGRRTGHERRPTDPFAES---PETNDNGNIVRLPDRSAESVD 62
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
++ P G+ + + I FD + FL A++++ IV++F +G V + L+
Sbjct: 63 GSDDDVP-GSSMAAGIMQIKLADDGFDERQFLQGAKSAFAMIVEAFAKGDVDGLRPLLSR 121
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y F ++ + + ++++V I ++ AS+E + +T+ V + + + D
Sbjct: 122 ELYGGFASAIEACEKAGEIQETTIVTIRSADVVEASLENSVAKVTVEFVTEQVKVTRSSD 181
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ + DIWTF R+I +PNW L++T++ E
Sbjct: 182 GEVIDGDPDRIDILTDIWTFARDIGNRDPNWELVATRVPE 221
>gi|83942018|ref|ZP_00954480.1| transporter, Tim44 family protein [Sulfitobacter sp. EE-36]
gi|83953067|ref|ZP_00961789.1| transporter, Tim44 family protein [Sulfitobacter sp. NAS-14.1]
gi|83842035|gb|EAP81203.1| transporter, Tim44 family protein [Sulfitobacter sp. NAS-14.1]
gi|83847838|gb|EAP85713.1| transporter, Tim44 family protein [Sulfitobacter sp. EE-36]
Length = 219
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 22/231 (9%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG------I 59
M+S +L+ A I F+ L+L+ VLG +TG EKP S++ ER +
Sbjct: 1 MNSPMIQLLVLAAIAVFLILRLKNVLGTRTGFEKPAE--------VSEKPERPSGPAFEV 52
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
I G +LD I + P G+ + ++ V F DFL AR +YE IV +
Sbjct: 53 IEGGP-----DLD-ITDHAPEGSDTALALAEMKRVEPSFGVSDFLGGARGAYEMIVMGYE 106
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYIT 177
G + I+ + +Y+ F + ++ R+ V+S +GI +M++ NA++++ T +T
Sbjct: 107 HGNLDEIKPFLSEDIYESFVEGVAAREDQGLTVESHFIGIREMELENATMDKTTNEAELT 166
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
IR V + S D+D ++ + D W F R + +PNW+L+ST
Sbjct: 167 IRFVAELTSVVKDRDGEIVEGSTTEVNRQKDTWVFARVMGSDDPNWLLVST 217
>gi|126463660|ref|YP_001044774.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17029]
gi|332559713|ref|ZP_08414035.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides WS8N]
gi|126105324|gb|ABN78002.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17029]
gi|332277425|gb|EGJ22740.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides WS8N]
Length = 219
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP K R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPAVPLEDPK----PRTRRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLTGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV--YITIRIVGQ 183
I + V++ F +++ R++ +V+++ +G+ ++ I AS + +T + +R VG+
Sbjct: 113 IRPFLSPDVFESFEEAVKAREAEGLSVEATFLGLREIDIHEASFDRDTRVGQVAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + ++PNW L++T
Sbjct: 173 LTSVVRDRTGQVIEGSPTEVKRQRDVWTFERRMGANDPNWQLVAT 217
>gi|126730112|ref|ZP_01745924.1| transporter, Tim44 family protein [Sagittula stellata E-37]
gi|126709492|gb|EBA08546.1| transporter, Tim44 family protein [Sagittula stellata E-37]
Length = 219
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 10/218 (4%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I F+ L+LR VLG + G E+P S K S+R+ + G D D
Sbjct: 8 LLVLAGIAVFLVLRLRSVLGTRDGFERPTPAEKS-KETTSRRE---FEVIEGGPDHDITD 63
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ E GT + + V F +FL AR +YE I+ F G + ++ +
Sbjct: 64 HVAE----GTDAANALAAMKRVEPSFSVSEFLGGARGAYEMILMGFERGDIEGLKPFLAD 119
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYD 190
V++ F++ + R+S + + VG+ +M + AS + +T IT+R VG+ S +
Sbjct: 120 DVFETFSEVVEARESEGLTIDADFVGVREMTLAGASFDPDTREAEITVRYVGELTSVVKN 179
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ ++ P + DIWT+ R + +PNW L++T
Sbjct: 180 AEGEIVEGSPTAVKRQKDIWTYARTMGADDPNWQLVAT 217
>gi|209966267|ref|YP_002299182.1| hypothetical protein RC1_3002 [Rhodospirillum centenum SW]
gi|209959733|gb|ACJ00370.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 230
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK----PFSGFFSGKYVFSKRDERGIITLGKGK 66
F IL+F + F+ +LR VLG++ G E+ PF+ + + ++ L
Sbjct: 8 FDILIFGMVAAFLVYRLRSVLGRRHGEERQRPNPFTPPPKAGQAPAPAESDNVVPLPDRG 67
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ E PI L + +R I + F+ K FL A+ ++E IV +F +G +
Sbjct: 68 RPPEAPLPVETGPIS--LEEGLRQIRAADPTFNEKHFLQGAKAAFEMIVKAFADGDTPTL 125
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
L+ VY F +++ R++ + ++ + + + + A ++ +TIR + +
Sbjct: 126 RPLLADDVYDGFAEAIRKRQAAGETRETRITAFESVDLKEARMDGRHAMVTIRFITHQVD 185
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + ++ DP+ +V+DIWTF RN +PNW+L+ T++
Sbjct: 186 CTVNAAGDVVDGDPDEAIEVVDIWTFSRNTRSPDPNWLLVETRV 229
>gi|89067415|ref|ZP_01154928.1| transporter, Tim44 family protein [Oceanicola granulosus HTCC2516]
gi|89046984|gb|EAR53038.1| transporter, Tim44 family protein [Oceanicola granulosus HTCC2516]
Length = 220
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 9/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP S + +R + +I G
Sbjct: 1 MNSPIIQLLVLAGIAVFLILRLRSVLGTREGFEKP-PVTESDRSALRRRPDLEVIE--GG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D ++ G+ + + F DFL AR +YE I+ +F G +
Sbjct: 58 PDRDIVDHVD----AGSDAADALARMKRAEPAFGVGDFLGGARGAYEMILMAFENGDLSE 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
++ + VY+ F+ + R+ +V+++ VG+ ++ + +A +E T +T+R G+
Sbjct: 114 VKDFLGPEVYEAFSQVIEERRERGLHVEATFVGLSEITLKDAEFDETTREAELTVRFTGE 173
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D ++ P + D+WTF R + ++PNW+L++T
Sbjct: 174 ITSVVRDAGGDIVEGSPTEIKRQRDVWTFARTMGANDPNWILVAT 218
>gi|84501205|ref|ZP_00999410.1| transporter, Tim44 family protein [Oceanicola batsensis HTCC2597]
gi|84390496|gb|EAQ02984.1| transporter, Tim44 family protein [Oceanicola batsensis HTCC2597]
Length = 220
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERG-IITLG 63
M+S +L+ A I F+ L+LR VLG + G EK P + SG S + RG +
Sbjct: 1 MNSPIIQLLVLAGIAVFLILRLRSVLGTREGFEKTPVT--RSGP---SNSEARGNFEVIE 55
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
G D +D + E P L ++ + + F +FL AR +YE I+ F G++
Sbjct: 56 GGPDPDIVDHVPEDSPAAGALARMKQ----LEPSFSVGEFLGGARGAYEMILMGFERGEM 111
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY--ITIRIV 181
I+ + VY+ F ++ R + +++ VG+ ++++++A +++ + +T+R V
Sbjct: 112 AEIKPFLSEEVYESFAHVVNERDAKGLTIEADFVGVKELQLVDAELDDTSREGELTVRFV 171
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
GQ A D+ +I DP+ D+WTF R + +PNW L++T
Sbjct: 172 GQLTFAVRDRAGEVIEGDPKSIKTQRDVWTFARKMGSDDPNWQLVAT 218
>gi|221640736|ref|YP_002526998.1| Import inner membrane translocase subunit Tim44 [Rhodobacter
sphaeroides KD131]
gi|221161517|gb|ACM02497.1| Import inner membrane translocase, subunit Tim44 precursor
[Rhodobacter sphaeroides KD131]
Length = 219
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP K R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPAVPLEDPK----PRTRRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLIGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV--YITIRIVGQ 183
I + V++ F +++ R++ +V+++ +G+ ++ I AS + +T + +R VG+
Sbjct: 113 IRPFLSPDVFESFEEAVKAREAEGLSVEATFLGLREIDIHEASFDRDTRVGQVAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + ++PNW L++T
Sbjct: 173 LTSVVRDRTGQVIEGSPTEVKRQRDVWTFERRMGANDPNWQLVAT 217
>gi|154251701|ref|YP_001412525.1| import inner membrane translocase subunit Tim44 [Parvibaculum
lavamentivorans DS-1]
gi|154155651|gb|ABS62868.1| import inner membrane translocase subunit Tim44 [Parvibaculum
lavamentivorans DS-1]
Length = 247
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 23 VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN---------LDS 73
VFL+LR VLG++TG+E+P +S + D+ ++TL K + D +D+
Sbjct: 19 VFLKLRSVLGRRTGHERPPYDPYS-ENPAPGNDK--VVTLPKRGRTDAPASGARDRVIDA 75
Query: 74 INELFP-------------IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ F G+ L + I FD + FL+ AR +YE IV +F
Sbjct: 76 AGDPFANAGARFRWRGVTEEGSPLAGALDAIADADRTFDTESFLSGARMAYEMIVTAFAA 135
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G ++ L+ VY F ++S R+ + S +GID I S++ +T+
Sbjct: 136 GDRATLKPLLSDDVYASFEGAISAREKAGLQIDQSFIGIDKAAITGGSLDGTRARLTVSF 195
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ S++ + D +++ DP ++ D+WTF R++ +PNW L++T
Sbjct: 196 RSELTSSTKNSDGVVVEGDPVTVREITDVWTFERDLRNRDPNWKLVAT 243
>gi|332186336|ref|ZP_08388081.1| tim44-like domain protein [Sphingomonas sp. S17]
gi|332013704|gb|EGI55764.1| tim44-like domain protein [Sphingomonas sp. S17]
Length = 257
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ++L A + F+ L+L VLGK+TG+E+ P S D + L + +
Sbjct: 44 FYVVLLAMVALFLALRLYSVLGKRTGHEQQPLP--------RSADDRARPVVLPRAAEPA 95
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ I R + +R I++ FD FL A+++Y +++F++G A+ +L
Sbjct: 96 QSPAPVANRNIDPRAEQGLRAIIAGEPGFDVNQFLGGAQSAYRMTLEAFWKGDEQALAEL 155
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
VD+ V F ++++ R+ + + + L+ +D KI+++ + IT+R ++ +
Sbjct: 156 VDTDVLGAFAEAIAQRQEAGETLDNRLIRVDSAKIVDSQLAGRDARITVRFDADIVAVTR 215
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D + +I+ + DIWTF R + +PNW L+ T
Sbjct: 216 DAEGQVIAGSLSDAVETHDIWTFARTLKSGDPNWKLVDT 254
>gi|85705737|ref|ZP_01036834.1| transporter, Tim44 family protein [Roseovarius sp. 217]
gi|85669727|gb|EAQ24591.1| transporter, Tim44 family protein [Roseovarius sp. 217]
Length = 219
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E P + + S+R E +I G
Sbjct: 1 MNSPILQLLVLAGIAIFLILRLKSVLGTRDGFEGPARNAPTPET--SRRREFEVIE--GG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + P + + D+ + DF FL AR +YE I+ +F GK+
Sbjct: 57 PDHDIVDHV----PEDSEAAGALADMKRIEPDFSVTTFLQGARGAYEMILMAFERGKLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I +D VY+ F + +R+ ++++ +G+ ++ + +A + T IT+R VG+
Sbjct: 113 ITPFLDREVYETFAQVVDSREQQGLSIEAEFIGVRELSLFDAKFDAATRRAEITVRYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+S D + ++ P + DIWT+ R + +PNW L++T
Sbjct: 173 LVSVVRDSNGEIVEGAPGQSKRQKDIWTYERIMGSDDPNWRLVAT 217
>gi|126738514|ref|ZP_01754219.1| transporter, Tim44 family protein [Roseobacter sp. SK209-2-6]
gi|126720313|gb|EBA17019.1| transporter, Tim44 family protein [Roseobacter sp. SK209-2-6]
Length = 241
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 13/226 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER-GIITLGK 64
M+S +L+ A I F+ L+L+ VLG + G EKP KR R + +
Sbjct: 24 MESPLIQLLVLAGIAVFLILRLKSVLGTREGFEKPPVS------AAEKRQGRPDLEVIEG 77
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G +D D + E P + R F +F+ AR +YE I+ F G++
Sbjct: 78 GPDRDITDHVEEESPAAQAFASMKR----AEPSFSVSEFVQGARGAYEMILMGFENGELD 133
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVG 182
A++ + VY F ++++ R+ +++ +G+ + ++ A ++ NT +T+R VG
Sbjct: 134 ALKGFLAEDVYDSFVEAVADREDKGLTIEAEFIGVRETAVVGAHFDDANNTAEVTMRFVG 193
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ S D+D ++ D + + D W F R++ +PNW L++T
Sbjct: 194 ELTSVVRDRDGEIVEGDAKAVKRQKDTWVFARSMGTDDPNWQLVAT 239
>gi|254486605|ref|ZP_05099810.1| transporter, Tim44 family [Roseobacter sp. GAI101]
gi|214043474|gb|EEB84112.1| transporter, Tim44 family [Roseobacter sp. GAI101]
Length = 219
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EK + +K +
Sbjct: 1 MNSPMIQLLVLAGIAVFLILRLKNVLGTREGFEKK-------PEIDAKPQKPSGPAFEVI 53
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +LD I + P G+ + ++ V F DFL AR +YE IV F G +
Sbjct: 54 EGGPDLD-ITDHAPEGSDTALALAEMKRVEPSFGVSDFLGGARGAYEMIVMGFEHGNLDD 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + ++ F D ++ R+ V+S+ +GI +M++ NA++++ T +TIR V +
Sbjct: 113 IKPFLSEDIFDSFVDGIAAREDQGLTVESTFIGIREMELENATMDKATKEAELTIRFVAE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S DKD ++I P + D W F R + +PNW+L+ST
Sbjct: 173 MTSVVKDKDGMVIEGSPTEVKRQKDTWVFARVMGSDDPNWLLVST 217
>gi|83594937|ref|YP_428689.1| hypothetical protein Rru_A3608 [Rhodospirillum rubrum ATCC 11170]
gi|83577851|gb|ABC24402.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 219
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 115/233 (49%), Gaps = 37/233 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEK----PFSGF---------FSGKYVFSKRDERGI 59
I+ FA I F+ L+LR VLG++TG E+ PF+ SG+ + R G
Sbjct: 10 IIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQPESAQDNVIDLSGRKAVAGRPGDGT 69
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ G + I F P+ FL A+ ++E I+ ++
Sbjct: 70 LAGG------------------------LTQIQLTDPSFSPEGFLIGAKAAFEMILMAYA 105
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ V+Q+F+ ++ R+ ++ +++ LVG ++I+ A ++ +T++
Sbjct: 106 KGDKAVLKPLLAGEVFQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDALVTVK 165
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
V + +++ DK + ++ +P +V DIWTF R+ ++PNW LI+T++ E
Sbjct: 166 FVTEQVNSVRDKSDTVVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPE 218
>gi|163745120|ref|ZP_02152480.1| hypothetical protein OIHEL45_06015 [Oceanibulbus indolifex HEL-45]
gi|161381938|gb|EDQ06347.1| hypothetical protein OIHEL45_06015 [Oceanibulbus indolifex HEL-45]
Length = 219
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP S R + G
Sbjct: 1 MNSPLIQLLVLAGIAVFLILRLKNVLGTREGFEKPPVS----DQTPSARSGPSFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + E G L ++ R V F DFL AR +YE IV + G +
Sbjct: 57 PDLDITDHVPEDSTSGKALAEMKR----VEPSFGVNDFLQGARGAYEMIVMGYERGDLAE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + VY+ F D ++ R+ ++++ +G+ ++++I+A ++E T +TIR VG+
Sbjct: 113 IQPFLAEDVYESFVDGVAAREDQGLTIEANFIGVRELELIDARMDEATKEAELTIRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
SA +++ ++ + D W F R + +PNW+L+ST
Sbjct: 173 LTSAVRNREGEIVEGSINEIKRQKDTWVFARVMGSDDPNWLLVST 217
>gi|103487499|ref|YP_617060.1| import inner membrane translocase, subunit Tim44 [Sphingopyxis
alaskensis RB2256]
gi|98977576|gb|ABF53727.1| import inner membrane translocase, subunit Tim44 [Sphingopyxis
alaskensis RB2256]
Length = 221
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGI---ITLGKGKK 67
F I+L A I F+ ++L VLGK+TG+E+ + V +RD+R I L G+
Sbjct: 4 FSIVLLAMIAAFLGMRLYSVLGKRTGHEQ--------EPVLPRRDDRSAPAPIRLDDGET 55
Query: 68 KDNLDSINELFPI--GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ S + + +R +++ +FD F+ AR +Y I+++F++G
Sbjct: 56 SAIVTSATDTAGLVYEPSAEAGLRQLLANDRNFDAGRFMEGARAAYRMILEAFWKGDRET 115
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ L D Y F +++ R++ + +++ L+ ID KI A + IT+R
Sbjct: 116 LRDLCDDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELNRGEARITVRYHADIS 175
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ + D D LI+ + D+WTF R I ++PNW+L
Sbjct: 176 AITRDADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLL 215
>gi|296283090|ref|ZP_06861088.1| hypothetical protein CbatJ_05690 [Citromicrobium bathyomarinum
JL354]
Length = 220
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 15/227 (6%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERGI-----ITLGK 64
+ I++ A I F+ L+L VLG++ +E+ P F K D+ G+ T
Sbjct: 3 YEIVILAMIAVFLGLRLYSVLGRRAEHEEEPVPHRFDAK------DKAGLAAAPQTTQAP 56
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+ ++ ++ P+ + + ++ I++ FD FL A+ +Y I++++++G
Sbjct: 57 PRAVTEQEAKPDVLPV---VERGVQSIIAADRGFDITSFLEGAKGAYGMILEAYWKGDKE 113
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
+ L D VYQ F ++ R+ + + + L+ I+D I +A +E IT+R V
Sbjct: 114 TLRDLCDESVYQGFAQAIDAREEAGETLDNRLIRIEDATIRDAELERKEARITVRFVADI 173
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ ++D+D +++ + + DIWTF R + P+W L+ T G
Sbjct: 174 AAVTHDRDGNMVAGSLDDAIESRDIWTFARRVDSRTPDWQLVETDEG 220
>gi|254460692|ref|ZP_05074108.1| import inner membrane translocase, subunit Tim44 [Rhodobacterales
bacterium HTCC2083]
gi|206677281|gb|EDZ41768.1| import inner membrane translocase, subunit Tim44 [Rhodobacteraceae
bacterium HTCC2083]
Length = 217
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E+P + SG+ KR E +I G
Sbjct: 1 MNSPIIQLLVLAGIAVFLILRLKNVLGTREGFEQPPAQVPSGR----KRPEFEVIEGGPD 56
Query: 66 KK-KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
D+ D + E + + + + F DFL AR +YE I+ F G++
Sbjct: 57 PDIADHTDGMPEA-------AEALAKMKAAEPSFGVSDFLGGARGAYEMILIGFERGEMA 109
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI-EENTV-YITIRIVG 182
I+ +D VY F + + R V++ VGI +M + +A+ +EN + ++++ +G
Sbjct: 110 DIKPFLDDDVYASFAEVVEMRAKQGLTVEAEFVGIREMSLADATFDDENGIGEVSVKFIG 169
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ S D ++ D + + DIWTF R + +PNW L++T
Sbjct: 170 EMTSVVRDNAGEIVEGDAKKVKRQKDIWTFARKMGSDDPNWQLVAT 215
>gi|254463881|ref|ZP_05077292.1| transporter, Tim44 family [Rhodobacterales bacterium Y4I]
gi|206684789|gb|EDZ45271.1| transporter, Tim44 family [Rhodobacterales bacterium Y4I]
Length = 214
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG----IITLGKGKKK 68
+L+ A I F+ L+LR VLG + G EKP + + RG + + G +
Sbjct: 4 LLVLAGIAVFLILRLRSVLGTREGFEKP---------PLPQSEARGRRPDLEVIEGGPDR 54
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
D D + E G++ + + + F ++F+ AR +YE I+ F G + I+
Sbjct: 55 DITDYVAE----GSKQAQALAAMKRAEPSFQVQEFVQGARGAYEMILMGFEHGNLDDIQP 110
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFIS 186
+ V+ F D+++ R+ +++ +G+ + + +A + T IT+R VG+ S
Sbjct: 111 FLAEDVFDSFVDAVAQREDKGYKIEADFIGVRETTLQDAQFDPQTGRAEITMRFVGELTS 170
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D+ ++ DP+ + D W F RN+ +PNW L++T
Sbjct: 171 VVRDRGGDIVEGDPKAIKRQKDTWIFARNMGSDDPNWQLVAT 212
>gi|149912880|ref|ZP_01901414.1| transporter, Tim44 family protein [Roseobacter sp. AzwK-3b]
gi|149813286|gb|EDM73112.1| transporter, Tim44 family protein [Roseobacter sp. AzwK-3b]
Length = 219
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 8/224 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E P +G +RD +I G
Sbjct: 1 MNSPLLQLLVLAGIAIFLILRLKSVLGTRDGFEGPPRSERAGATP-QRRDTFEVIE--GG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D++++ L ++ R + F+ FL AR +YE I+ +F G++
Sbjct: 58 PDYDIIDNVSDGSDAADALARMKR----IEPSFNVTQFLQGARGAYEMILMAFERGQLED 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI-EENTVYITIRIVGQF 184
+ +D VY+ F + R+ V++ +G+ + K+ A++ ++N IT+R VG+
Sbjct: 114 VAPFLDEDVYEAFAQVIDARQEQGLIVEAEFLGLRETKLAEATLSDDNRAAITVRFVGEL 173
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D + ++ D + + DIWTF R + +PNW L++T
Sbjct: 174 TSIVRDANGEIVEGDAKTAKRQKDIWTFERVMGSDDPNWRLVAT 217
>gi|255263169|ref|ZP_05342511.1| transporter, Tim44 family [Thalassiobium sp. R2A62]
gi|255105504|gb|EET48178.1| transporter, Tim44 family [Thalassiobium sp. R2A62]
Length = 219
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP + S R + G
Sbjct: 1 MNSPIIQLLVLAGIAIFLILRLRNVLGTREGFEKPPAQQSSAP----DRALSDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + P G + + V F+ +FL AR +YE I+ +F G++
Sbjct: 57 PDHDITDHV----PEGGDAYNALLGMKKVDPSFNVGEFLGGARGAYEMILMAFERGEIEE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + S VY+ F + RK+ ++++ VGI DM + A E T I +R VG+
Sbjct: 113 IKPFLSSDVYEAFATVVDDRKAKGVTIEANFVGISDMALNAADFNETTGEAEIAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S DK +I + D WTF R++ +PNW L++T
Sbjct: 173 MTSIVRDKGGDVIEGSETTVKRQKDTWTFARDMDADDPNWDLVAT 217
>gi|94498195|ref|ZP_01304756.1| import inner membrane translocase, subunit Tim44 [Sphingomonas sp.
SKA58]
gi|94422325|gb|EAT07365.1| import inner membrane translocase, subunit Tim44 [Sphingomonas sp.
SKA58]
Length = 217
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK-- 68
++I++ A I F+ L+L VLGK+TG+E+ + + D + L G
Sbjct: 2 YVIVILAMIAGFLALRLYSVLGKRTGHEQEPA-------LRPAEDRAKVTVLQPGPTNHG 54
Query: 69 --DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
D + L G +R +++ +FD F+ AR++Y+ ++++F+ G +
Sbjct: 55 GGDTVRLAEGLIAPGAETG--VRTLIATDRNFDVPQFVEGARSAYKMVLEAFWRGDREEL 112
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
L D+ V F D+++ R+++ + + LV I+ +II A++ + T I +R +
Sbjct: 113 AWLCDADVLASFEDAIAAREADGHVLDNRLVRIEKAQIIEATVRDGTAEIAMRFEADIAA 172
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D+D +I+ DIWTF R+I ++PNW L T
Sbjct: 173 VTRDRDGNVIAGSMTDAIDTKDIWTFTRDIRSADPNWKLSET 214
>gi|288959728|ref|YP_003450069.1| mitochondrial import inner membrane translocase [Azospirillum sp.
B510]
gi|288912036|dbj|BAI73525.1| mitochondrial import inner membrane translocase [Azospirillum sp.
B510]
Length = 231
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD------ERGIITLGKGK 66
I++FA I F+ +LR VLG++TG E+ FS +K D +R
Sbjct: 10 IVIFAMIAAFLVYRLRSVLGRRTGEERQRPNPFSAAPGAAKPDNVVSLPQRNQPRPDAAP 69
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+D + S +E + +++ I + FD K FL+ A+ ++ IVD+F G +
Sbjct: 70 GQDVMAS-DEPLSLAASIDQ----IRAADPTFDEKHFLDGAKAAFAMIVDAFARGDTATL 124
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE-NTVYITIRIVGQFI 185
L+ VY F + R++ + ++ + + + +++ A ++ T +T+R+V +
Sbjct: 125 RPLLADDVYDGFARVIRDRQAAGEQHETRIEQVREAEVVEAKLDAGRTARVTVRLVSDQV 184
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ D++ ++ DP+ + D+WTF R++ +PNW L+ +
Sbjct: 185 NVVRDRNGAVVDGDPKALVENTDVWTFARDLRSRDPNWALVEVR 228
>gi|85709415|ref|ZP_01040480.1| hypothetical protein NAP1_11058 [Erythrobacter sp. NAP1]
gi|85688125|gb|EAQ28129.1| hypothetical protein NAP1_11058 [Erythrobacter sp. NAP1]
Length = 219
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I++ A I F+ L+L VLG++ +E+ ++ + + G+ +
Sbjct: 5 IVILAMIAAFLGLRLYSVLGRRAEHEEES---VPQRFDAGDKPQAQPPIAGQPAQPAPQR 61
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
SI EL + + + +R+I S FD F++ A+ +YE +++ F+EG + +L D
Sbjct: 62 SI-ELEGVMPAVERGVREIASADRSFDIGQFMDGAKGAYEMVLEGFWEGDKDTLRELCDD 120
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY F+ ++ R+ + + L+ I++ +I +AS++ I + V + + DKD
Sbjct: 121 DVYAGFSAAIDAREEAGHTLDNKLIRIEETRIHSASMDGRMARIAVLFVADIAAVTRDKD 180
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++++ + + D+WTF RNI +PNWVL T G
Sbjct: 181 GVVVAGSLDDAIESRDVWTFSRNIGSRDPNWVLDETDEG 219
>gi|304320483|ref|YP_003854126.1| hypothetical protein PB2503_04547 [Parvularcula bermudensis
HTCC2503]
gi|303299385|gb|ADM08984.1| hypothetical protein PB2503_04547 [Parvularcula bermudensis
HTCC2503]
Length = 222
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D +++ F I F+ +L +LG K G+E P + + R ER G+G ++D
Sbjct: 3 DPVLIFFVVIAAFLSYRLYTLLGSKGGHE-PTDAERERIGLPTGRPERD----GQGTQED 57
Query: 70 N--LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ ++ P+ V D Y DFDP +F+ A+ +YE I+++F G++ +
Sbjct: 58 EAVVAPRSDAKPLPAWAETVRAD----YADFDPDEFVTGAKAAYEMIIEAFANGRLDDVR 113
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
VD V + F ++ R + ++ ++ +LVGI+ +++ A + + +T++ I
Sbjct: 114 AYVDPDVMRTFEIAVRGRDNAQQTMEVTLVGIERAEVVEAKRQSAHLDVTVKFRSDQIRV 173
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + + +I DP VID WTF R + ++PNW L +T+
Sbjct: 174 TRNAEGDVIEGDPNRIDLVIDRWTFSRPLSSTDPNWTLTATE 215
>gi|254450565|ref|ZP_05064002.1| transporter, Tim44 family [Octadecabacter antarcticus 238]
gi|198264971|gb|EDY89241.1| transporter, Tim44 family [Octadecabacter antarcticus 238]
Length = 224
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
Query: 1 MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
M M+S +L+ A I F+ L+LR VLG + G EKP + + ++R +
Sbjct: 1 MKETHMNSPVLQLLVLAGIAIFLILRLRNVLGTREGFEKPKAP----PAIPTRRFGPDLE 56
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ G D D ++ + + K + + + F+ ++FL AR +YE I+ F +
Sbjct: 57 VIEGGPDPDVTDYVD----ADSDMAKALTAMKTADRSFNVREFLRGARGAYEMILTGFEK 112
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITI 178
G + I+ + S VY F + +R+ + ++ +GI + +++A +E T ITI
Sbjct: 113 GDLAEIKPFLSSDVYDAFAGVVESREKDGLSIDFKFIGISETTLVDAEFDETTKNAEITI 172
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + + SA YD L P K D+WTF R + +PNW L++T
Sbjct: 173 KFLNESTSAVYDNGGDLKEGSPTEIKKQRDVWTFGRTMGTGDPNWFLVAT 222
>gi|307294078|ref|ZP_07573922.1| import inner membrane translocase subunit Tim44 [Sphingobium
chlorophenolicum L-1]
gi|306880229|gb|EFN11446.1| import inner membrane translocase subunit Tim44 [Sphingobium
chlorophenolicum L-1]
Length = 218
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 116/224 (51%), Gaps = 17/224 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK---- 66
++I++ A I F+ L+L VLGK+TG+E+ + +ER +T+ + +
Sbjct: 2 YVIVILAMIAGFLALRLYSVLGKRTGHEQ--------EPALRPAEERAKVTIVQPRPVTE 53
Query: 67 -KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D++ + L G +R +++ +FD F+ A+++Y ++++F+ G
Sbjct: 54 MAGDSVRLADGLIAPGGEAG--VRALIAADRNFDVPQFVEGAKSAYRMVLEAFWRGDRQE 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+E L D+ V F D+++ R++ + + LV I+ ++I++A + I++R
Sbjct: 112 LEWLCDADVLASFQDAITAREAEGHVLDNRLVRIEKVQIVDAGVTGRMAEISLRFEADIA 171
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + D+D N++ S + G DIWTF R++ ++PNW L T
Sbjct: 172 AVTRDRDGNVVAGSLTDAVG-TNDIWTFTRDLRSTDPNWKLSET 214
>gi|254440619|ref|ZP_05054113.1| Tim44-like domain family [Octadecabacter antarcticus 307]
gi|198256065|gb|EDY80379.1| Tim44-like domain family [Octadecabacter antarcticus 307]
Length = 219
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP + S+R + + G
Sbjct: 1 MNSPVLQLLVLAGIAIFLILRLRNVLGTREGFEKPKVA----PAIPSRRPTPDLEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D ++ + + +V+ + + F+ ++FL AR +YE I+ F +G +
Sbjct: 57 PDPDVTDYVD----ADSDVARVLTAMKTADRSFNVREFLRGARGAYEMILTGFEKGDIAE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + S VY F + R+ + +V +GI + +++A +E T I+I+ + +
Sbjct: 113 IKPFLSSDVYDAFAGVVEAREKDGLSVDFKFIGISETTLVDAEFDETTKNAEISIKFLCE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
SA YDK L K D+WTF R + +PNW L++T
Sbjct: 173 STSAVYDKGGDLKEGSATDIKKQRDVWTFGRTMGTGDPNWFLVAT 217
>gi|296444992|ref|ZP_06886953.1| import inner membrane translocase subunit Tim44 [Methylosinus
trichosporium OB3b]
gi|296257413|gb|EFH04479.1| import inner membrane translocase subunit Tim44 [Methylosinus
trichosporium OB3b]
Length = 229
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 9/224 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII----TLGKG 65
D IL+ A + FV +L VLG +T E +G V S G++ + G
Sbjct: 8 DPSILVLAALAAFVVWKLWSVLGVRTDRENSAAG-----RVPSPGRRFGVVPPPASTGFA 62
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ + L G++ + + + FD K+FL A+ +YE +V+SF +G
Sbjct: 63 APPQDQSRWDGLAEPGSKGWAGLDALAAADRGFDAKNFLEGAKKAYELVVESFAKGDREM 122
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ L+ + VY F +++ R+ ++ ++ +V I+ + +A +E + IR V + I
Sbjct: 123 LRNLLANDVYDSFAKAIAAREQRGESAEARVVAIETASVEDAQVERGRAQVAIRFVVKLI 182
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
SA D +I D E + D+WTF R+I +PNW L++T+
Sbjct: 183 SARRDSAGEVIEGDVERPIDITDLWTFARDISSRDPNWKLVATE 226
>gi|56698697|ref|YP_169074.1| Tim44 family protein [Ruegeria pomeroyi DSS-3]
gi|56680434|gb|AAV97100.1| transporter, Tim44 family [Ruegeria pomeroyi DSS-3]
Length = 218
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 11/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP R R + G
Sbjct: 1 MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKP-----PVPQQPENRTRRDFEVIEGG 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D D + E P L + R + F +F+ AR +YE IV F G +
Sbjct: 56 PDRDITDHVPEDSPQAQALAAMKR----IEPAFSVSEFVQGARGAYEMIVMGFERGNLDE 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
IE + V++ F ++ R+ +++ +G+ + I + ++ N IT+R VG+
Sbjct: 112 IEPFLTEEVFETFVGVVAAREDQGLTIEAEFIGVRETSIQDVHFDKDSNRGEITMRFVGE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + +PNW+L++T
Sbjct: 172 LTSVVRDRGGDVIEGSPTAVKRQKDVWTFARVMGTDDPNWLLVAT 216
>gi|294675588|ref|YP_003576203.1| import inner membrane translocase subunit Tim44 [Rhodobacter
capsulatus SB 1003]
gi|294474408|gb|ADE83796.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
capsulatus SB 1003]
Length = 219
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNE-KPFSGFFSGKYVFSKRDERGIITLGK 64
M F +++ A I F+ L+L+ VLG + G E +P G + + +
Sbjct: 1 MSPALFQLIVLAAIAIFLILKLKSVLGTREGYEDEPMPVEAPGPRAADRFE-----VIEG 55
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G D +D + P G+ + + V F+ FL ++ +YE I+ +F G +
Sbjct: 56 GPDHDIIDHV----PEGSDAAVALAQMKRVEPTFNVGAFLQGSKVAYEMILMAFERGDLS 111
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVG 182
A+ + + V + F +++ R+ V++S +G+ ++ + AS E++ +T+R G
Sbjct: 112 AVRRFLAPEVLEAFETAVADRQRQGLTVEASFLGLRELVLTEASFNESSREAEVTVRFGG 171
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ IS + D + ++ DP+ K D WTF R + S+PNW L++T
Sbjct: 172 ELISVARDANGQIVEGDPKAPRKQRDSWTFARVMGSSDPNWQLVAT 217
>gi|149204297|ref|ZP_01881264.1| transporter, Tim44 family protein [Roseovarius sp. TM1035]
gi|149142182|gb|EDM30229.1| transporter, Tim44 family protein [Roseovarius sp. TM1035]
Length = 219
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G F G R R + G
Sbjct: 1 MNSPILQLLVLAGIAIFLILRLKSVLGTRDG----FEGPTRSAPAPETRRRREFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + E L ++ R + DF FL AR +YE I+ +F GK+
Sbjct: 57 PDHDIVDHVPEDSDAAAALAEMKR----IEPDFSVTTFLQGARGAYEMILMAFERGKLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
+ +D VY+ F + R+ +++ +G+ ++ + +A + +T I++R VG+
Sbjct: 113 VTPFLDRDVYETFAQVVDAREQQGLTIEAEFIGVRELTLADARFDADTRRAEISVRYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
IS D ++ P + D+WT+ R + +PNW L++T
Sbjct: 173 LISVVRDSTGEIVEGVPGQSKRQKDVWTYERVMGADDPNWRLVAT 217
>gi|86136747|ref|ZP_01055325.1| transporter, Tim44 family protein [Roseobacter sp. MED193]
gi|85826071|gb|EAQ46268.1| transporter, Tim44 family protein [Roseobacter sp. MED193]
Length = 218
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 114/227 (50%), Gaps = 15/227 (6%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M+S +L+ A I F+ L+LR VLG + G EKP +++ G + +
Sbjct: 1 MESPLISLLVLAGIAVFLILRLRSVLGTREGFEKP-------PVAPTQKRSNGPDLEVIE 53
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
G +D D + E G+ K + + V F +F+ AR++YE I+ F +G++
Sbjct: 54 GGPDRDITDYVEE----GSDQAKALAAMKRVEPSFQVGEFVQGARSAYEMILMGFEKGEL 109
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIV 181
I+ + V+ F ++++ R+ +++ +G+ + +++A +E T +T+R +
Sbjct: 110 DDIQGFLAEDVFDSFVEAVAQREDQGLTIEAEFIGVRETAVVDAIFDETTGVAELTMRFI 169
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
G+ S +++ ++ D + + DIW F R++ +PNW L++T
Sbjct: 170 GEMTSVVRNREGEIVEGDAKAIKRQKDIWVFARSMGVDDPNWQLVAT 216
>gi|119385510|ref|YP_916566.1| import inner membrane translocase, subunit Tim44 [Paracoccus
denitrificans PD1222]
gi|119375277|gb|ABL70870.1| import inner membrane translocase, subunit Tim44 [Paracoccus
denitrificans PD1222]
Length = 218
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 10/218 (4%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I F+ L+LRGVLG + G E P + + +R + G +
Sbjct: 8 LLVLAAIAVFLILRLRGVLGTRDGFESP--------RIPEEPVQRRRFDVIDGTAEAGDS 59
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
I + G+ K + ++ + DF FL+ A+++YE I+ +F G + + +
Sbjct: 60 DITDHAEPGSPAAKALAEMKRIEPDFAVGPFLSGAKSAYEMILMAFERGDLSEVRGFLAP 119
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYD 190
V + F + RK+ ++ +G + + A T +++R VG+ I A+ D
Sbjct: 120 PVAEAFESVIEDRKARNLTTEAQFLGTRETALAGAEFTPATGMAELSVRFVGEMIVATRD 179
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D +I DP+ K D WTF R + +PNW L++T
Sbjct: 180 ADGNVIEGDPKAARKQRDTWTFARRMGQDDPNWQLVAT 217
>gi|163738003|ref|ZP_02145419.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis BS107]
gi|163742601|ref|ZP_02149987.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis 2.10]
gi|161384186|gb|EDQ08569.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis 2.10]
gi|161388619|gb|EDQ12972.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis BS107]
Length = 218
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + ++R E +I G
Sbjct: 1 MESPVIQLLVLAGIAVFLILRLKSVLGTREGFEKPAVPQADRQ---NRRPELEVIE--GG 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + E P + L + + F+ +DF+ AR +YE I+ +F G++
Sbjct: 56 PDHDIVDYVPEDSPQASDLAAMKK----AEPSFEVRDFVQGARGAYEMILMAFERGELDD 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
IE + V+ F +++ R+ +++ +G+ + + + S + T IT+R V +
Sbjct: 112 IEAFLAPDVFDSFVTAVAHREDQGLTIEAEFIGVRETTLTDTSFDPATGDAQITMRFVAE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ ++ DP+ + D W F R + ++PNW L++T
Sbjct: 172 LTSVVRDRGGDIVEGDPKAVKRQKDTWVFGRTMGSADPNWHLVAT 216
>gi|254455846|ref|ZP_05069275.1| import inner membrane translocase, subunit Tim44 [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082848|gb|EDZ60274.1| import inner membrane translocase, subunit Tim44 [Candidatus
Pelagibacter sp. HTCC7211]
Length = 198
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+L A I F+FL+LRG+LGK+TG F GK
Sbjct: 10 IILLAMIAGFIFLRLRGILGKRTG--------FEGK------------------------ 37
Query: 73 SINELFPIGTRLNKVMRDIVS--------VYTDFDPKDFLNEARNSYEAIVDSFFEG--K 122
+ +K++++ V+ + + K+F+ A+ +YE I+ F + K
Sbjct: 38 -------AAPQFDKILKEAVAKQAPVNNETFDENAQKEFIKGAKIAYETIITDFSDNDNK 90
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ + L++ +Y FND+L R + + +GI+ I + + +T+ +
Sbjct: 91 LTTSKPLLNKEIYDQFNDALKERSERGHYAEITFIGINSATIKEHKKIDKILNVTVDFIA 150
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ I+ DKD +IS DPE K+ D W F R++ NPNW L++T
Sbjct: 151 EVITCIKDKDKKIISGDPEKIKKIYDTWVFSRDVTSPNPNWQLVNT 196
>gi|46204686|ref|ZP_00049618.2| COG4395: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 223
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 16/224 (7%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK------------PFSGFFSGKYVFS- 52
DS D L+F + FV +LR VLG+KTG E+ P +G G V
Sbjct: 2 QDSFDVTTLIFLALAVFVIWRLRSVLGQKTGAERSPFRPVERNRTEPPAGRAEGDNVVRL 61
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+R + I E G+ + + + +V V FDP+ FL A+ +YE
Sbjct: 62 PGADRAQAAAAVQTVTRDWRGIAEP---GSAVARGLEQVVQVEPGFDPRTFLEGAKGAYE 118
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
IV +F +G + L+ VY F+ +S R+ + V+++ + ID +I+ ++
Sbjct: 119 IIVTAFAQGDRKTLRPLLSREVYDGFDRVISERERRRETVETTFISIDKAEIVAIEVKNR 178
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
IT+R + I+A+ D D +I + E +V D+WTF R +
Sbjct: 179 AAQITVRFLSNLITATRDADGKVIDGNAETGVEVPDVWTFARTL 222
>gi|300024770|ref|YP_003757381.1| import inner membrane translocase subunit Tim44 [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526591|gb|ADJ25060.1| import inner membrane translocase subunit Tim44 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 251
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
+FDP+ F+ A +YE IV +F EG ++ L+ V+ F+ +++ R++ + +
Sbjct: 112 EFDPESFVTGAGRAYEMIVSAFAEGNRRMLKDLLSKDVFDGFSSAIADREARGEVLDQQF 171
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
VGI I++A ++ T +T+R + + ISA+ DK +I+ D + V DIW F R++
Sbjct: 172 VGIKKADIVDAEVKNGTAALTVRFISELISATRDKAGEVIAGDAQKIKDVTDIWIFSRDV 231
Query: 217 PP----SNPNWVLISTK 229
SNPNW L++T+
Sbjct: 232 SSAKALSNPNWRLVATQ 248
>gi|91762532|ref|ZP_01264497.1| Putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter ubique HTCC1002]
gi|91718334|gb|EAS84984.1| Putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter ubique HTCC1002]
Length = 197
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY--VFSKRDERGIITLGKGKKKDN 70
I+L A I F+FL+LRG+LGKKTG F GK F K ++ IT
Sbjct: 10 IILLAMIAGFIFLRLRGILGKKTG--------FEGKIPPQFEKEFQKTNITPK------- 54
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG--KVHAIEK 128
P+ ++V + K+FL A+ +YE I+ F + K+ A +
Sbjct: 55 --------PVSENFDEVSQ-----------KEFLKGAKIAYETIITDFSDSDNKLIASKP 95
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L++ ++Y F ++L R + + + +GI I E+++ +T+ V + I+
Sbjct: 96 LLNKKIYDQFKEALEDRANKGHFAEITFIGIKSAVIKTHKKIEDSLEVTVDFVSEIITCI 155
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
DKD ++S D + V D W F ++I SNPNW+LI+T
Sbjct: 156 KDKDKNIVSGDSDKIKTVYDTWVFSKDIKSSNPNWLLINT 195
>gi|85374926|ref|YP_458988.1| hypothetical protein ELI_10495 [Erythrobacter litoralis HTCC2594]
gi|84788009|gb|ABC64191.1| hypothetical protein ELI_10495 [Erythrobacter litoralis HTCC2594]
Length = 215
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F I++ A I F+ ++L VLG++ E+ V R + G K
Sbjct: 3 FEIVILAMIAAFLGMRLYSVLGQRAEQEEE---------VIPNRYDAGDQPQQAAPKPAT 53
Query: 71 LDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ EL P + + + +R I + FD FL A+ +Y +++++++G +
Sbjct: 54 --QVVELQPNPNLHPSVEQGVRAIAAADRGFDVSSFLEGAKGAYGMVLEAYWKGDKETLR 111
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+L D VY F ++ R+ + + ++L+ I+D I +A ++ T +T+R V +
Sbjct: 112 ELCDDDVYASFAGAIDAREEAGEALDNTLIRIEDAVIRDAEMDGRTARVTVRFVADIAAV 171
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ DKD +I+ + + DIWTF RN+ + P+WVL T G
Sbjct: 172 TRDKDGNVIAGSLDDAIESRDIWTFSRNVDAAGPDWVLDETDEG 215
>gi|254476055|ref|ZP_05089441.1| transporter, Tim44 family [Ruegeria sp. R11]
gi|214030298|gb|EEB71133.1| transporter, Tim44 family [Ruegeria sp. R11]
Length = 214
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I F+ L+L+ VLG + G EKP + SKR E +I G +
Sbjct: 4 LLVLAGIAVFLILRLKSVLGTREGFEKPIAPPAERP---SKRPEFEVIEGGPDQ------ 54
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
I + P G+ + + + V F +DF+ AR +YE I+ +F G++ I+ +
Sbjct: 55 DITDYVPEGSAQAEDLAAMKKVEPSFQVRDFVQGARGAYEMILMAFERGELDDIQPYLAP 114
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYD 190
V+ F +++ R+ +++ +G+ + + + S + T IT+R V + S +
Sbjct: 115 DVFDSFVTAVAHREDQGLTIEADFIGVRETTLTDTSYDSVTGEAQITMRFVAEMTSVVRN 174
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++ DP+ + D W F R + S+PNW L++T
Sbjct: 175 SAGEIVEGDPKAIKRQKDTWVFGRTMGSSDPNWFLVAT 212
>gi|71083043|ref|YP_265762.1| translocase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062156|gb|AAZ21159.1| Putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter ubique HTCC1062]
Length = 197
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY--VFSKRDERGIITLGKGKKKDN 70
I+L A I F+FL+LRG+LGKKTG F GK F K ++ IT
Sbjct: 10 IILLAMIAGFIFLRLRGILGKKTG--------FEGKIPPQFEKEFQKTNITPK------- 54
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG--KVHAIEK 128
P+ ++V + K+FL A+ +YE I+ F + K+ A +
Sbjct: 55 --------PVSENFDEVSQ-----------KEFLKGAKIAYETIITDFSDSDNKLIASKP 95
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ ++Y F ++L R + + + +GI I E+++ +T+ V + I+
Sbjct: 96 LLSKKIYDQFKEALEDRANKGHFAEITFIGIKSAVIKTHKKIEDSLEVTVDFVSEIITCI 155
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
DKD ++S D + V D W F ++I SNPNW+LI+T
Sbjct: 156 KDKDKNIVSGDSDKIKTVYDTWVFSKDIKSSNPNWLLINT 195
>gi|310817171|ref|YP_003965135.1| transporter, Tim44 family protein [Ketogulonicigenium vulgare Y25]
gi|308755906|gb|ADO43835.1| transporter, Tim44 family protein [Ketogulonicigenium vulgare Y25]
Length = 219
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 26 QLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLN 85
+LR VLG + G EKP + + KR +I G +D +D + P G+
Sbjct: 21 RLRSVLGSRDGFEKPIAQVPPEEA--RKRPTLDVIE--GGPDRDIVDHV----PEGSATA 72
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
++ + F +FL+ +R +YE I+ +F G + + + V+ F ++ R
Sbjct: 73 LIIGQMKKAEPSFSLSEFLSGSRGAYEMILMAFERGDIEPVRGFIAPEVFDAFAGVIADR 132
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYDKDNLLISSDPEIF 203
++ V++ +GI D+ + +A+ + T + +R V + S D D ++ P++
Sbjct: 133 QARGLKVEAHFIGIRDVGLDDAAFDPATGEAELVVRFVAEMTSVVRDADGTVVEGAPDVA 192
Query: 204 GKVIDIWTFVRNIPPSNPNWVLIST 228
+ D+WTF R + S+PNW L++T
Sbjct: 193 KRQKDVWTFARKMGASDPNWTLVAT 217
>gi|83950785|ref|ZP_00959518.1| transporter, Tim44 family protein [Roseovarius nubinhibens ISM]
gi|83838684|gb|EAP77980.1| transporter, Tim44 family protein [Roseovarius nubinhibens ISM]
Length = 214
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I F+ L+LR VLG + G E P S + + +G + G D D
Sbjct: 4 LLVLAGIAIFLLLRLRSVLGTRDGFEPPRS-----ELPGAPDRRQGFEVIEGGPDLDITD 58
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ E L ++ R + F +FL+ +R +YE I+ SF GK+ I +
Sbjct: 59 HVPEDSDAAAALAEMKR----IEPSFSVSEFLSGSRQAYEWILMSFENGKLDEIVPFLSP 114
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYD 190
V++ F + R+ V++ G+ D+ +I+A++++ T IT++ +G+ S +
Sbjct: 115 DVHEAFAQVIDARQEKNLTVEAEFYGVRDVTLIDAALDDTTKAAEITVKFLGELSSVVRN 174
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +I P + D WTF R + +PNW L++T
Sbjct: 175 EQGEIIEGTPGEPKRQKDTWTFERVMGSDDPNWRLVAT 212
>gi|294085200|ref|YP_003551960.1| hypothetical protein SAR116_1633 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664775|gb|ADE39876.1| hypothetical protein SAR116_1633 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 212
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 30/227 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVF--SKRDERGIITLGKG 65
I++FA I + L+L+ VLG++TG ++KP G V S +DE G + G G
Sbjct: 6 IIIFAVIAVLLVLRLKSVLGQRTGFEQPQDKKPMQAANDGDVVPFPSNKDETGALN-GHG 64
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
I T L K R+ F FL A ++E ++ ++ EG +
Sbjct: 65 --------------IAT-LRKADRN-------FTEAAFLGGATQAFEMVLRAYAEGDLAQ 102
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+++L+ + Q F S+ R +N++++ L I + I+N ++ ++ +T+
Sbjct: 103 LKRLLGYDLLQSFTQSIQKRNANKESLTIDLENIKEASILNIAVVDSVAAVTVHFHSVQT 162
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ D D +I D +++DIWTF R++ ++PNW L+ T+ +
Sbjct: 163 RIARDADENIIDEDESQSQEIVDIWTFERDLTLNDPNWKLVETETAD 209
>gi|84514927|ref|ZP_01002290.1| hypothetical protein SKA53_11923 [Loktanella vestfoldensis SKA53]
gi|84511086|gb|EAQ07540.1| hypothetical protein SKA53_11923 [Loktanella vestfoldensis SKA53]
Length = 211
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
++ A I F+ L+LRGVLG + G EKP + + R + + G D D
Sbjct: 1 MVLAGIAVFLILRLRGVLGTREGFEKPAVT----RQETTPRRKHDFDVIEGGPDLDITDH 56
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
+ L + R V DF+ +FL AR +YE I+ +F + +I +
Sbjct: 57 VQADSAAAKALAAMKR----VDPDFNVTEFLGGARGAYEMILMAFENSDLDSIVPFISHD 112
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV--YITIRIVGQFISASYDK 191
VY+ F + R+ V +S +GI DM + +A +E T +++R + S +
Sbjct: 113 VYEAFASVVDDRQRQGLTVTASFIGISDMTLAHAEFDEATKEGEVSVRFKSEMTSVVRNA 172
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ ++ + +++D WTF R + +PNW L++T
Sbjct: 173 EGEVVEGSTKEIKRLVDTWTFARKMDAGDPNWKLVAT 209
>gi|87198608|ref|YP_495865.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
aromaticivorans DSM 12444]
gi|87134289|gb|ABD25031.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
aromaticivorans DSM 12444]
Length = 247
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 11/232 (4%)
Query: 8 SGDFL----ILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITL 62
SG+ L I++ A I F+ L+L VLG++ +E+P +K + G +
Sbjct: 13 SGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGN 72
Query: 63 GKGKKKDNLD------SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
+ + L + E +R I++ FD FL A+ +Y I++
Sbjct: 73 ARSAETGALAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILE 132
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F+ G + +L D+ VY+ F ++ R + + + + L+ I++ +II ASIE T I
Sbjct: 133 AFWRGDKEELAQLCDADVYEGFASAIDARANAGETIDARLIRIEEARIIGASIEGTTARI 192
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+R + S + + + +++ + D+WTF R++ +P+W+L T
Sbjct: 193 AVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWLLDET 244
>gi|254512041|ref|ZP_05124108.1| transporter, Tim44 family [Rhodobacteraceae bacterium KLH11]
gi|221535752|gb|EEE38740.1| transporter, Tim44 family [Rhodobacteraceae bacterium KLH11]
Length = 219
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD----ERGIIT 61
M+S +L+ A I F+ L+L+ VLG + G EKP + +RD R
Sbjct: 1 MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKP--------PLQQQRDTNDARRDFEV 52
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ G D D + E L + R V F +F+ AR +YE IV F +G
Sbjct: 53 IEGGPDHDITDHVAEDSEQAETLTAMKR----VEPSFSVSEFVQGARGAYEMIVMGFEKG 108
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIR 179
+ I+ + V+ F ++ R+ +++ +G+ + + + +++T IT+R
Sbjct: 109 NLDEIQPFLSEEVFDTFVSVVADREDKGLTIEAEFIGVRETTLADVKFDKDTNQAEITMR 168
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+G+ S D+ +I +P + D WTF R + +PNW+L++T
Sbjct: 169 FIGELTSVVRDRGGDIIEGNPNTVKRQKDSWTFARVMGLDDPNWLLVAT 217
>gi|126734398|ref|ZP_01750145.1| import inner membrane translocase, subunit Tim44 [Roseobacter sp.
CCS2]
gi|126717264|gb|EBA14128.1| import inner membrane translocase, subunit Tim44 [Roseobacter sp.
CCS2]
Length = 220
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 9/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LRGVLG + G EKP K D + G
Sbjct: 1 MNSPLIQLLVLAGIAVFLILRLRGVLGTREGFEKPAVTRPEPSSRVGKPD---FDVIEGG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D I E G+ K + D+ F+ +FL AR +YE I+ +F G + +
Sbjct: 58 PDLDITDHIEE----GSDSAKALADMKRADPSFNVSEFLGGARGAYEMILMAFENGDLDS 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I + VY+ F + R+ V + +GI DM + A ++ +++R +
Sbjct: 114 IVPFISEDVYEAFASVVDERQRQGLTVDAKFIGISDMTLTEAVFDDFSKEGEVSVRFKSE 173
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D +I + D WTF R + +PNW L++T
Sbjct: 174 MTSVVRDNAGDIIEGSETEIKRQKDTWTFARKMDADDPNWRLVAT 218
>gi|148556731|ref|YP_001264313.1| import inner membrane translocase subunit Tim44 [Sphingomonas
wittichii RW1]
gi|148501921|gb|ABQ70175.1| import inner membrane translocase, subunit Tim44 [Sphingomonas
wittichii RW1]
Length = 226
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK-KDNL 71
I++ A + FV +L VLG++TG+E+ + G+ +N
Sbjct: 14 IVILAMVFLFVAFRLWSVLGRRTGHEQTIARPAEAAPAPIG----------AGRSLPENA 63
Query: 72 DSINELFP--IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ P + R +R I S FD FL AR++Y I+++++ G A+ +L
Sbjct: 64 TPVLPAKPAVVEPRAEAGVRAIQSADGGFDAAQFLEGARSAYRMILEAYWRGDEEALRRL 123
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
D VY+ F +++ R+ + + + LV I+ I A + T +T+R + +
Sbjct: 124 TDDDVYEAFAAAITERREANEVLDNRLVSIESAVIEQARMNGQTANVTVRFDADIAAVTR 183
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D + +++ D+WTF R++ +PNW L+ T
Sbjct: 184 DGEGNVVAGSLTDAVPTHDVWTFSRHVRSDDPNWTLVET 222
>gi|254707406|ref|ZP_05169234.1| calcium-binding EF-hand [Brucella pinnipedialis M163/99/10]
Length = 164
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 15 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 74
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 75 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 134
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
+ F ++ R+ + V+SS VGID I
Sbjct: 135 EGFVAAIDEREKRGETVRSSFVGIDKAGI 163
>gi|110677837|ref|YP_680844.1| hypothetical protein RD1_0444 [Roseobacter denitrificans OCh 114]
gi|109453953|gb|ABG30158.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 220
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I F+ +L+ VLG + G F + + R + G D D
Sbjct: 9 LLVLAGIAVFLIFRLKNVLGTRDG----FEPGPAQAPTSDRSPTRDFEVIEGGPDLDITD 64
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
++E L + R + F+ +FL AR +YE IV + G++ I+ +
Sbjct: 65 HVDEHSDAAEALANMKR----LEPGFNVTEFLGGARGAYEMIVMGYENGELADIQPFLAE 120
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYD 190
+Y+ F D ++ R+ ++++ +G+ ++K+I+A+++ +T +TIR + SA +
Sbjct: 121 DIYESFVDGVAAREDQGLTIEANFIGVRELKLIDATLDPDTNEAELTIRFTAELTSAVRN 180
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +I + D W+F R + +PNW+L+ST
Sbjct: 181 SEGEIIEGSLTDVKRQKDTWSFARPMGSDDPNWILVST 218
>gi|21328722|gb|AAM48728.1| conserved hypothetical protein [uncultured marine proteobacterium]
Length = 216
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII-TLGKGKKKDNL 71
+L A I ++ L+LRGVLG + G+E P + + ++ D+R + + G +D
Sbjct: 6 LLALAGIAIYLILKLRGVLGTRDGHEGPRAN------IVARADDRPKLEVIDGGPDQDIT 59
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
D E + + + + F +FL ++++YE I+ +F G + +++ ++
Sbjct: 60 DHAAE----DSDAARALLGMKHAEPSFSVTEFLYGSKSAYEMILMAFENGDLGSVKAFLN 115
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASY 189
VY F + RK+ ++++ +G+ D ++ A+ + N I +R + + S
Sbjct: 116 QDVYDAFASVVEARKAQGLSIEAEFIGVRDTGLMGATFDPKTNAAEIDVRFICELTSVLR 175
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D +I + + D+WTF R + +PNW LI+T
Sbjct: 176 NSDGDIIEGNETEVKRQRDVWTFGRTMGADDPNWQLIAT 214
>gi|261314892|ref|ZP_05954089.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
gi|261303918|gb|EEY07415.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
Length = 168
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 20 TFFVFLQLRGVLGKKTGNEKP----FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
+FLQLR VLG++TGNEKP ++ S + + +++L + + + +I+
Sbjct: 19 AVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTAID 78
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY
Sbjct: 79 KIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVY 138
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
+ F ++ R+ + V+SS VGID I
Sbjct: 139 EGFVAAIDEREKRGETVRSSFVGIDKAGI 167
>gi|163732954|ref|ZP_02140398.1| hypothetical protein RLO149_09850 [Roseobacter litoralis Och 149]
gi|161393489|gb|EDQ17814.1| hypothetical protein RLO149_09850 [Roseobacter litoralis Och 149]
Length = 220
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I F+ +L+ VLG + G F S + R + G D D
Sbjct: 9 LLVLAGIAVFLIFRLKNVLGTRDG----FEPGPSQTPMSDSAPMRDFEVIEGGPDLDITD 64
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ E + + + ++ + F+ +FL AR +YE IV + G++ I+ +
Sbjct: 65 HVEE----NSDAAEALANMKRLEPGFNVTEFLGGARGAYEMIVMGYENGELADIQPFLAE 120
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI--EENTVYITIRIVGQFISASYD 190
+Y+ F D ++ R+ +++S +G+ ++K+++A++ E N +TIR + SA +
Sbjct: 121 DIYESFVDGVAAREDQGLTIEASFIGVRELKLMDATLDPETNEGELTIRFTAELTSAVRN 180
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +I + D W+F R + +PNW+L+ST
Sbjct: 181 SEGEIIEGSLTEVKRQKDTWSFARPMGSDDPNWILVST 218
>gi|323135818|ref|ZP_08070901.1| import inner membrane translocase subunit Tim44 [Methylocystis sp.
ATCC 49242]
gi|322398909|gb|EFY01428.1| import inner membrane translocase subunit Tim44 [Methylocystis sp.
ATCC 49242]
Length = 233
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 14/231 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D +++FA + FV +LR VLG + + P F + + G L D
Sbjct: 9 DPSLVVFAALAVFVIWKLRSVLGVRVDRDAPPPAQFQPR----RPSPAGATPLPGAAPLD 64
Query: 70 NLDSINELFPI--------GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ + P G + I + FD + FL+ AR +Y+ IV +F G
Sbjct: 65 DGAAARRNVPASWEGVAEKGGAAASGLDAIAAADPRFDGQAFLDGARRAYDMIVSAFARG 124
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ L+ V+ F ++ R+ N + ++++++ ID + +A IT+R
Sbjct: 125 DRDQLRPLLSKEVFDGFAAEIARREENGETMETAVIAIDSALVESARAAPRLNEITVRFA 184
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ ++ +K+ I I V+++WTF R+ S+PNW L++T+ E
Sbjct: 185 TRLMNLRRNKEGETIEGGHTI--PVVELWTFARDPRASDPNWKLVATRPAE 233
>gi|149185516|ref|ZP_01863832.1| hypothetical protein ED21_20864 [Erythrobacter sp. SD-21]
gi|148830736|gb|EDL49171.1| hypothetical protein ED21_20864 [Erythrobacter sp. SD-21]
Length = 218
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 13/225 (5%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERGIITLGKG---K 66
+ I++ A I F+ L+L VLG+++ +E+ P F ER + +
Sbjct: 3 YEIVILAAIAAFLGLRLYSVLGERSEHEEEPARHRFDAPDAVPPAAERPAAPARESVRLR 62
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
DN S NE +R I S FD FL A+ +Y I+++F++G +
Sbjct: 63 SVDNASSANE---------NAIRAIASADPRFDLLAFLEGAKAAYGMILEAFWKGDKDTL 113
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
L D VY F+ ++ R + +++++ LV I+D I +A ++ T I++ V S
Sbjct: 114 RDLTDDDVYAGFSGAIDARDTAGESLENRLVRIEDATIHSAELDNRTARISVLFVSDIAS 173
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ DKD +I+ + + DIWTF RN+ +PNWVL T G
Sbjct: 174 LTRDKDGNVIAGSLDDAVESRDIWTFTRNVDAMDPNWVLDETDQG 218
>gi|159045985|ref|YP_001534779.1| import inner membrane translocase [Dinoroseobacter shibae DFL 12]
gi|157913745|gb|ABV95178.1| import inner membrane translocase [Dinoroseobacter shibae DFL 12]
Length = 221
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK---PFSGFFSGKYVFSKRDERGIITL 62
M+S IL+ + F+ L+LR VLG + G EK P G + V +RD +
Sbjct: 1 MNSNMLQILVLLGVAVFLILRLRSVLGTREGFEKKPVPLDG--PERDVTPRRD---FEVI 55
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G D D + P G+ K + + F+ +FL A+ +YE I+ SF G
Sbjct: 56 EGGPDTDITDHV----PDGSDSAKALAAMKMAEPGFNVTEFLGGAKGAYEWILMSFENGD 111
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY--ITIRI 180
+ ++ + + + F++ + R V++ VG+ + ++ A+ + +T +T+R
Sbjct: 112 MDDVQGFLSEELSEAFSEVIEQRNEQGLTVEAEFVGVRETTLVEAAFDRDTREGEVTVRF 171
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
VG+ + + ++ DP + D+WTF R + +PNW L++T
Sbjct: 172 VGELTFVVRNAEGEIVEGDPTEIKRQKDVWTFARVMGSDDPNWRLVAT 219
>gi|148259158|ref|YP_001233285.1| import inner membrane translocase, subunit Tim44 [Acidiphilium
cryptum JF-5]
gi|326402311|ref|YP_004282392.1| putative transporter [Acidiphilium multivorum AIU301]
gi|146400839|gb|ABQ29366.1| import inner membrane translocase, subunit Tim44 [Acidiphilium
cryptum JF-5]
gi|325049172|dbj|BAJ79510.1| putative transporter [Acidiphilium multivorum AIU301]
Length = 221
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+L A + F+ L+LR VLG++TG E+P + + G + G + +
Sbjct: 9 IVLLALVAGFLVLRLRSVLGRRTGYERPPMPEPTAAGGMQRPG--GPVIEGVAEPPRSTR 66
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ T + + + I FDP FL+ A S+ IV +F G + A+ L+
Sbjct: 67 PVPAPH---TVVGQTLARIAQAERGFDPARFLDGAEASFRRIVLAFAAGDLAALRPLLTP 123
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
V+ F +++ R + + +V I + I A + I +R V + + D+
Sbjct: 124 GVFATFEQAVAQRAEAGETQHTEIVRIVEATIDEAELLGGEAVIVVRFVSDQQNYTRDRQ 183
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+I+ E +++D+W+F +++ ++P W L + + G
Sbjct: 184 GQVIAGT-EAMTEIVDLWSFEKSLGAADPTWRLAAARSG 221
>gi|114328998|ref|YP_746155.1| transporter [Granulibacter bethesdensis CGDNIH1]
gi|114317172|gb|ABI63232.1| transporter [Granulibacter bethesdensis CGDNIH1]
Length = 231
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV-----FSKRDERGIITLGKGKK 67
++L I F+ L+LR VLG++ G E+P G+ R R + + +
Sbjct: 16 LVLLGMIAVFLVLRLRSVLGRRVGFERPEVPANQGQTGNRIPGLPVRLRRPDAAVAEART 75
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
D+ + + R+ +V R FD FLN A ++ IV ++ +G+ A+
Sbjct: 76 YVLPDASSPTGQVLARMKEVDRS-------FDAVRFLNNAEQAFRVIVTAYAQGEREALR 128
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+ + F ++ R+ + ++ + I D++I NA +E+ +TIR F+S
Sbjct: 129 PLLTEATFTIFCQAIDAREQDGARQQTEIQSIRDIRIENARLEQTQAALTIR----FVS- 183
Query: 188 SYDKDNLLI--SSDP----EIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D+ N+++ + +P E +++D+WTF R++ +P W L T
Sbjct: 184 --DQHNVMLNRTGEPVEGVEGLTEIVDVWTFERDLASRDPTWRLSGT 228
>gi|294010816|ref|YP_003544276.1| hypothetical protein SJA_C1-08300 [Sphingobium japonicum UT26S]
gi|292674146|dbj|BAI95664.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 218
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
++I++ A I F+ L+L VLGK+TG+E+ + +ER +T+ + +
Sbjct: 2 YVIVILAMIAGFLALRLYSVLGKRTGHEQ--------EPALRPAEERAKVTIVQPR---- 49
Query: 71 LDSINELFPIGTRLNKVM---------RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ E+ RL++ + R +++ FD F+ A+ +Y+ ++++F+ G
Sbjct: 50 --PVPEMAGDSVRLSEGLIAPGGEAGVRALIAADRSFDVPQFVEGAKAAYKMVLEAFWRG 107
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+E L D+ V F ++++ R++ + + LV I+ ++I++A + I++R
Sbjct: 108 DRQELEWLCDADVLASFEEAIAAREAEGHVLDNRLVRIEKVQIVDAGVTGRMAEISLRFE 167
Query: 182 GQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + D+D N++ S + G DIWTF R++ ++PNW L T
Sbjct: 168 ADIAAVTRDRDGNVVAGSLTDAVG-TNDIWTFTRDLRSTDPNWKLSET 214
>gi|4098584|gb|AAD00329.1| unknown [Rhodobacter capsulatus]
Length = 183
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 6/166 (3%)
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G D +D + P G+ + + V F+ FL ++ +YE I+ +F G +
Sbjct: 20 GPDHDIIDHV----PEGSDAAVALAQMKRVEPTFNVGAFLQGSKVAYEMILMAFERGDLS 75
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVG 182
A+ + + V + F +++ R+ V++S +G+ ++ + AS E++ +T+R G
Sbjct: 76 AVRRFLAPEVLEAFETAVADRQRQGLTVEASFLGLRELVLTEASFNESSREAEVTVRFGG 135
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ IS + D + ++ DP+ K D WTF R + S+PNW L++T
Sbjct: 136 ELISVARDANGQIVEGDPKAPRKQRDSWTFARVMGSSDPNWQLVAT 181
>gi|326386373|ref|ZP_08207996.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209034|gb|EGD59828.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
nitrogenifigens DSM 19370]
Length = 218
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 16 FAFITFFVFLQLRGVLGKKT-GNEKPFSGFFSG-------KYVFSKRDERGIITLGKGKK 67
A I F+ L+L VLG++ G+++P + + SK E+ +T
Sbjct: 1 MAMIALFLGLRLYAVLGRRAEGSDEPLRRRVEQPDPQAALRAMPSKLPEKPAMT-----G 55
Query: 68 KDNLDSIN-ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ +L + F G +R I++ FD FL A+ +Y ++D+F+ G A+
Sbjct: 56 RPSLPTAEPSAFDAGAETG--IRAIIAADRRFDVALFLTGAKAAYGMVLDAFWRGDKDAL 113
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+L + VY+ F ++ RK + V + L+ +DD +I++A I +R V +
Sbjct: 114 AQLCERSVYESFAAAIDARKQAGETVDARLIRVDDARIVSADFNAPVARIAVRFVADVAT 173
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + + +++ + + D+WTF R++ +P+W L T G
Sbjct: 174 VTRNTEGTVVAGSLDDAIESRDLWTFSRDLTSRDPDWQLDETDQG 218
>gi|73667391|ref|YP_303407.1| membrane translocase, subunit Tim44 [Ehrlichia canis str. Jake]
gi|72394532|gb|AAZ68809.1| membrane translocase, subunit Tim44 [Ehrlichia canis str. Jake]
Length = 212
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+ ++A + F+F +L LGK +G + I++ ++ D
Sbjct: 4 LAIYALLAAFIFFRLYNSLGKTSG--------------LQPNNHSQAISIVVEDTQEYDD 49
Query: 73 SINELFPIGTRLNKVMRDIVSVYT----DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ E+ + NK + I++ +F K F++ + ++E I+ +F EG VH +
Sbjct: 50 AEIEIESVMDTCNKDEKSIINQIKKKDKEFSLKHFMDGSIKAFEIIIKAFNEGNVHILSM 109
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+D+ +Y F++ + RK + +V + KII + N YIT++ + + I+
Sbjct: 110 LLDTNLYNSFSEEIENRKKLNHVYEDIIVSVTSHKIIKLDLSGNIAYITVKFITEQINFV 169
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
DKD+ +I K+ D+WTF ++I SN W L
Sbjct: 170 KDKDDNVIQGSTSKINKIEDVWTFRKDITLSNKKWYL 206
>gi|83944953|ref|ZP_00957319.1| hypothetical protein OA2633_09999 [Oceanicaulis alexandrii
HTCC2633]
gi|83851735|gb|EAP89590.1| hypothetical protein OA2633_09999 [Oceanicaulis alexandrii
HTCC2633]
Length = 219
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL FA + F+ ++L VLGK +G + + V ++ ER G G ++
Sbjct: 6 ILFFAGLAVFLGVRLYMVLGKSSGR--------AAEDVEREQRERAEAA-GMGAPPPSMR 56
Query: 73 SINELFPIGTRL----NKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ P + + + I FDP +F AR +YE IV ++ +G A+E
Sbjct: 57 PQADETPFAAQFAGPAGEGLMQIAQHDPAFDPDEFRKGARAAYEMIVLAYAKGDREALEP 116
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ RV + ++ +++ R+ V + + I +I AS+ +N + I + S +
Sbjct: 117 LLTERVKKAYDQAIAAREEKNWTVTTEIDRIKSAEISEASLNDNRAKVKIAFSVELASET 176
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ ++ D V +IW+F R++ NPNW L K
Sbjct: 177 RNAQGDVVEGDLTTLKTVDEIWSFERDVTSENPNWRLSGVK 217
>gi|68171233|ref|ZP_00544637.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Ehrlichia chaffeensis str. Sapulpa]
gi|88658281|ref|YP_507053.1| tim44-like domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|67999353|gb|EAM85998.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Ehrlichia chaffeensis str. Sapulpa]
gi|88599738|gb|ABD45207.1| tim44-like domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 212
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+ ++AF+ F+F +L LGK +G + + + I + ++ D D
Sbjct: 4 LAIYAFLAAFIFFRLYHSLGKTSGLQS------------NSHSQTISIIMEDTQEHDTAD 51
Query: 73 -SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
I+ + I +K ++ I +F + F++ + ++E I+ +F EG +H + L+
Sbjct: 52 IDIDSVMEICNENDKSIINHIKKKDKEFSLRHFMDGSIKAFEIIIKAFNEGNIHILSMLL 111
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
D+ +Y F + + RK+ + + +V I KI S+ N YIT++ + + I+ D
Sbjct: 112 DTNLYNSFVEEIENRKALGQLYEDIIVSITSHKITKLSLSGNIAYITVKFISEQINFVKD 171
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
KD+ ++ K+ D WTF ++ SN W L
Sbjct: 172 KDDNILQGSTSKINKIEDTWTFRKDTTLSNKKWYL 206
>gi|89052682|ref|YP_508133.1| import inner membrane translocase, subunit Tim44 [Jannaschia sp.
CCS1]
gi|88862231|gb|ABD53108.1| import inner membrane translocase subunit Tim44 [Jannaschia sp.
CCS1]
Length = 235
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 10/214 (4%)
Query: 17 AFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINE 76
A I F+ L+LR VLG + G EKP S S+RD R + +G D++ +
Sbjct: 28 AGIAIFLILRLRSVLGTRDGFEKPPVAPGS-----SRRDVRRDFEVIEGGPDDDILDHVD 82
Query: 77 LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
G+ K + + F +FL AR +YE I+ +F G V + + V +
Sbjct: 83 D---GSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLE 139
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY--ITIRIVGQFISASYDKDNL 194
F + R ++++ VG+ ++ + A+ + + +T+R +G+ S + D
Sbjct: 140 TFETVIDQRNEQGLSIEAEFVGVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGE 199
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+I D + D+WTF R + +PNW L++T
Sbjct: 200 IIEGDATEIKRQRDVWTFARKMGADDPNWALVAT 233
>gi|114769764|ref|ZP_01447374.1| transporter, Tim44 family protein [alpha proteobacterium HTCC2255]
gi|114549469|gb|EAU52351.1| transporter, Tim44 family protein [alpha proteobacterium HTCC2255]
Length = 218
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK---PFSGFFSGKYVFSKRDERGIITLGKGKK 67
F +++ I FV L+LR VLG ++G E P F K + D +
Sbjct: 6 FQLVILGVIALFVILRLRSVLGTRSGFEPTNVPKPTFQKEKTPTEENDNK--------ID 57
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+D D ++ P G L+++ + ++F +F+ A +YE I+ +F EG +
Sbjct: 58 RDIADYVSVDSPSGKALSQMKK----AESNFLVTEFIQGAGQAYEMILIAFEEGDRDGLR 113
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFI 185
+ VY F ++ R+ + N+ ++ +G+ ++K+ +A + IT+ +V +
Sbjct: 114 PFLADDVYDSFESVITEREKAQLNIDATFIGLREIKLTSAEYDWRAKEGEITLSLVAELT 173
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + ++ +I D K D WTF R + NPNW L++T
Sbjct: 174 TVVKNINDEIIEGDKNKIKKQKDTWTFSRIMGNDNPNWTLVAT 216
>gi|162147851|ref|YP_001602312.1| transporter protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161786428|emb|CAP56010.1| putative transporter protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 228
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 16/225 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F ++LF + F+ L+LR +LG + G E S G + G+ +
Sbjct: 12 FDLVLFGLVAAFLALRLRSILGTRVGVEP--------APPPSAVPRPGPVIEGRAEPPAT 63
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
L + P TR+ +V+ I DF P FL ++ IV +F G V + + +
Sbjct: 64 LTDYDVPAP-ETRVGQVLAAIAQQERDFVPAQFLKGVEAAFRQIVLAFAAGDVAMLRERL 122
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE----NTVYITIRIVGQFIS 186
+ + F ++ +R+ + + K+ + I + I++A+IEE I +RIV IS
Sbjct: 123 TANAFSAFEAAIRSREQSGEIQKAEVRAIASLAIVDAAIEERDGATHARIDVRIVSDQIS 182
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVR--NIPPSNPNWVLISTK 229
+ DKD ++ + + D+WTF R + S W L +++
Sbjct: 183 LTSDKDGHPVAGT-DAVTEFSDLWTFERPLGVAISGAAWRLAASR 226
>gi|209542471|ref|YP_002274700.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530148|gb|ACI50085.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 226
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 16/225 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F ++LF + F+ L+LR +LG + G E S G + G+ +
Sbjct: 10 FDLVLFGLVAAFLALRLRSILGTRVGVEP--------APPPSAVPRPGPVIEGRAEPPAT 61
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
L + P TR+ +V+ I DF P FL ++ IV +F G V + + +
Sbjct: 62 LTDYDVPAP-ETRVGQVLAAIAQQERDFVPAQFLKGVEAAFRQIVLAFAAGDVAMLRERL 120
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE----NTVYITIRIVGQFIS 186
+ + F ++ +R+ + + K+ + I + I++A+IEE I +RIV IS
Sbjct: 121 TANAFSAFEAAIRSREQSGEIQKAEVRAIASLAIVDAAIEERDGATHARIDVRIVSDQIS 180
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVR--NIPPSNPNWVLISTK 229
+ DKD ++ + + D+WTF R + S W L +++
Sbjct: 181 LTSDKDGHPVAGT-DAVTEFSDLWTFERPLGVAISGAAWRLAASR 224
>gi|254295483|ref|YP_003061506.1| import inner membrane translocase subunit Tim44 [Hirschia baltica
ATCC 49814]
gi|254044014|gb|ACT60809.1| import inner membrane translocase subunit Tim44 [Hirschia baltica
ATCC 49814]
Length = 200
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D +++FA + FFV +L VLG KTG E P S + KR +G +
Sbjct: 2 DIELIIFAAVAFFVLYRLYSVLGTKTGAEPPPSVV---REATQKRKN------SEGSDES 52
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
N+ F G + M +I + + F P DF +++ +YE IV++F EG + L
Sbjct: 53 NVTPFRPSF-TGPGAS-AMEEISQIDSTFSPSDFTRKSKKAYEMIVEAFAEGDKETLSNL 110
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ VY+ + ++ R+ N L+ + +I +A + + +GQ +S S+
Sbjct: 111 LVDDVYEAYVSAIDEREQNNTE-PLRLMRLKSAEIADAELLDGD-------IGQ-VSVSF 161
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ SD E +IWTF R++ SNP W+L
Sbjct: 162 EAQ----LSDGENLRTAKEIWTFERSLKSSNPAWLL 193
>gi|218460136|ref|ZP_03500227.1| hypothetical protein RetlK5_11796 [Rhizobium etli Kim 5]
Length = 121
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERG--IITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ G+ +D +I+ + GT LN+ +R + F+PK+FLN AR +YE IV ++
Sbjct: 61 RRDATGEDEDRFAAIDAVAAPGTPLNESLRALNKADPSFNPKEFLNGARMAYEMIVMAY 119
>gi|161170260|gb|ABX59230.1| uncharacterized protein conserved in bacteria [uncultured marine
bacterium EB000_55B11]
gi|297183789|gb|ADI19912.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 218
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F +++ I FV L+LR VLG ++G F K F K K ++N
Sbjct: 6 FQLVILGVIALFVILRLRSVLGTRSG----FEPTNVPKPTFQKE---------KTPTEEN 52
Query: 71 LDSIN----ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ I+ + + + K + + ++F +F+ A +YE I+ +F EG +
Sbjct: 53 DNKIDRDIADYVSVDSSSGKALSQMKKAESNFLVTEFIQGAGQAYEMILIAFEEGDRDGL 112
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQF 184
+ VY F ++ R+ + N+ ++ +G+ ++K+ +A + IT+ +V +
Sbjct: 113 RPFLADDVYDSFESVITEREKAQLNIDATFIGLREIKLTSAEYDWRAKEGEITLSLVAEL 172
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + ++ +I D K D WTF R + NPNW L++T
Sbjct: 173 TTVVKNINDEIIEGDKNKIKKQKDTWTFSRIMGNDNPNWTLVAT 216
>gi|330813377|ref|YP_004357616.1| putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486472|gb|AEA80877.1| putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter sp. IMCC9063]
Length = 193
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINEL 77
I F+FL+LR VLGK N P F+ K +D+ + E
Sbjct: 1 MIAGFIFLRLRNVLGKGADNS-PIKPNFANK------------------SRDDFSFVKE- 40
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
+ T NK + FD F A +YE I+++F +G +++ L+ ++Y D
Sbjct: 41 --VRTESNKPV---------FDEASFKKGAEYAYEMIINAFAKGDKQSLKPLLTKKLYLD 89
Query: 138 FNDSLSTRKSNEKNVKSSL--VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
F + R NEK + SSL +GI+ M I S +T R + Q I+ ++ +
Sbjct: 90 FEKIIDDR--NEKKLTSSLTFIGIEKMSIDKVSNVNTKYKVTARFISQIINCLKNEKGEV 147
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ D E D+W+F R++ S+P W L
Sbjct: 148 VEGDAEKTKTTTDVWSFERDLKDSDPTWYL 177
>gi|269959143|ref|YP_003328932.1| Tim44-like domain containing protein [Anaplasma centrale str.
Israel]
gi|269848974|gb|ACZ49618.1| Tim44-like domain containing protein [Anaplasma centrale str.
Israel]
Length = 217
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-NEKP---FSGFFSGKYVFSKRDERGIITLGKGKKK 68
+ ++AF+ F+F +L G LGK + N +P + G SG+ S G K +
Sbjct: 4 LAIYAFVAAFIFFRLYGSLGKASSVNFQPSAIYPGQVSGEQAASD---------GSVKPQ 54
Query: 69 D-NLDSI-NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
D +DS+ + P+ +++ V I + DF K F+ + ++EAIV + +G +
Sbjct: 55 DIPVDSVVADSAPVD-QISSVFEAIKARNKDFSVKHFIEGSAAAFEAIVSALNQGNTELL 113
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
L++ +Y F + R+ + + +V I K+ NA +E N IT++ V + I+
Sbjct: 114 SSLLNRHMYNSFVKEVERRRDAGRVHEDVVVSITSQKVTNAELEGNFATITVQFVTEQIN 173
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D + ++ + D W F R++ + W L ST
Sbjct: 174 VVRDVEGQVVDGSTSKVNVIEDTWKFERDVTAAGRRWYLAST 215
>gi|296535049|ref|ZP_06897314.1| Tim44 domain protein [Roseomonas cervicalis ATCC 49957]
gi|296264626|gb|EFH10986.1| Tim44 domain protein [Roseomonas cervicalis ATCC 49957]
Length = 165
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T + + ++ I FDP FL A ++ IV +F G + L+ Y F +
Sbjct: 17 TPVGQALQRIRQADAGFDPYAFLGGAEGAFRMIVTAFAAGDRATLRDLLSEDTYAGFEQA 76
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
++ R+S + ++ + G+ +M I A + + IT+RIV ++ + +S E
Sbjct: 77 ITARESAGERQRTEIHGVHEMAIDAADLRGSVADITLRIVSDQVNLTTGPQGEAVSGT-E 135
Query: 202 IFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ D+WTF R++ +P W L+ T+
Sbjct: 136 AVTELTDVWTFQRDLRSGDPTWKLVGTQ 163
>gi|296115110|ref|ZP_06833751.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
hansenii ATCC 23769]
gi|295978211|gb|EFG84948.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
hansenii ATCC 23769]
Length = 227
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++ + F+ L+LRG+LGK+ G E + + + +I +GK +
Sbjct: 12 LVFLGLVAVFLVLRLRGILGKRVGAEP------AARTMQPTPTPAPVI---EGKPEPVAP 62
Query: 73 SINELFPIG-TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ P TR+ +V+ I + F P F+ + +++ IV ++ G + + + +
Sbjct: 63 ATTYDIPTPDTRVGQVLSAIAARQQGFTPDGFIRQVEDAFRQIVQAYAVGDIETLRQHLT 122
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT----VYITIRIVGQFISA 187
+ F ++ +R+ + ++S + I DM II+A + + I +RIV +S
Sbjct: 123 ESTFTAFEAAIVSRQQAHETMRSEIRDITDMAIIDAELSPDVSVPYARIEVRIVSDQVSV 182
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTK 229
+ D++ +S + + D+WTF R + + P W L +++
Sbjct: 183 TLDQNGQPVSGV-DAVTEFSDLWTFERILGAATPGAQWRLGASR 225
>gi|114571519|ref|YP_758199.1| import inner membrane translocase Tim44 [Maricaulis maris MCS10]
gi|114341981|gb|ABI67261.1| import inner membrane translocase, subunit Tim44 [Maricaulis maris
MCS10]
Length = 206
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
V T FDP A+N+Y IV++F G +E L+ V + ++ R + V+
Sbjct: 69 VDTRFDPTAVKEGAQNAYVMIVEAFAAGDRKVLEPLLAPNVLDRYTTAIDQRADRGETVR 128
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ + + D+ II A +NT I +R V + + + D D+ +++ D V + W F
Sbjct: 129 TEVERLKDVDIIEAGHADNTARIKVRFVAEIATETRDSDDAVVAGDIGRLSTVTEDWVFE 188
Query: 214 RNIPPSNPNWVL 225
R +PNWVL
Sbjct: 189 RRTNKGDPNWVL 200
>gi|262277816|ref|ZP_06055609.1| import inner membrane translocase subunit Tim44 [alpha
proteobacterium HIMB114]
gi|262224919|gb|EEY75378.1| import inner membrane translocase subunit Tim44 [alpha
proteobacterium HIMB114]
Length = 204
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+L A + F+ L+LR LGK N P F+
Sbjct: 10 IILLAIMAGFILLRLRSTLGKGADN-MPMKARFTQA------------------------ 44
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
NE F +++ +D T FD K F+ A +YE I+++F +G A++ L+
Sbjct: 45 QSNEEFTKPIIEDEIKQDT----TKFDEKIFIKGAEAAYEIIINAFAKGDRKALKPLLTK 100
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y++F + R+S + + + S +GI + KI++ ++ + + V + ++
Sbjct: 101 DLYKNFEGVIKERESKKISSQMSFIGIKETKILDIDNKDTFYKVKTKFVSEIVNCLKSDK 160
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+I +PE V D+W F +++ ++P W L
Sbjct: 161 GEVIEGNPEEIKLVTDVWVFEKDLKNNDPTWYL 193
>gi|58040316|ref|YP_192280.1| putative translocase transmembrane protein [Gluconobacter oxydans
621H]
gi|58002730|gb|AAW61624.1| Putative translocase transmembrane protein [Gluconobacter oxydans
621H]
Length = 265
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 26/242 (10%)
Query: 12 LILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDER--------- 57
L++LF + + ++L VLG++ G E+P +GF G + D
Sbjct: 24 LVVLF-VLAVALGVRLYRVLGRRVGMQGVRQERPGAGFGPGAQKGAAPDAARPSIPPPLP 82
Query: 58 GIITLGKGKKKDNLDSI-----NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
G + G D E+ TR+ V+ +I SV+ F P FL EA ++
Sbjct: 83 GQVAGKPGAAPGVFDQAVPDVAYEIPAPATRVGTVLGEIGSVFPGFSPDGFLKEAEGTFR 142
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA---SI 169
+V +F G A+EKL+ F+ ++ R + +S L GI+ + I++A S
Sbjct: 143 QVVPAFAVGDRTALEKLLTPASMDSFSAAIDARVQAGETQRSDLRGIESLSILDAMLVSA 202
Query: 170 EENTVY--ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
E+ T I ++IV + ++ D++ + E + D+W F R S+ W L +
Sbjct: 203 EDGTRVGRIEVKIVSRQVNILTDREGEPVVGT-EAVTEFHDLWLFERVAGQSDARWRLAA 261
Query: 228 TK 229
++
Sbjct: 262 SR 263
>gi|329114333|ref|ZP_08243095.1| Import Inner Membrane Translocase Subunit [Acetobacter pomorum
DM001]
gi|326696409|gb|EGE48088.1| Import Inner Membrane Translocase Subunit [Acetobacter pomorum
DM001]
Length = 242
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L A + F+ L+LR VLGK+ G + P + + R + GK ++ +
Sbjct: 28 LVLLALVAAFLVLRLRSVLGKRVGIQ-PVQVQLQVRPDAAPR-----VVEGKPEQAEAAA 81
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ P GTR+ ++ DI F P+ FLN A+ ++ +V ++ +G ++ ++ +
Sbjct: 82 EFDIPAP-GTRVGTLLADIRQKDPSFTPQQFLNGAQTAFAQVVGAYAQGNLNVLKTYLTP 140
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN---ASIEENT-VYITIRIVGQFISAS 188
V+ F ++ R + E+ ++ + I + I + +E T I +RIV IS
Sbjct: 141 AVFSAFEAGITARTNAEETQRTDVKAIRSLAIEDVRLTPMEAGTAAAIDVRIVSDQISLV 200
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+K+ ++ + + D+WTF R + + W L + +
Sbjct: 201 LNKEGQPVTGT-DAVTEFSDLWTFERLLDVNGSTWRLAAAR 240
>gi|302381470|ref|YP_003817293.1| import inner membrane translocase subunit Tim44 [Brevundimonas
subvibrioides ATCC 15264]
gi|302192098|gb|ADK99669.1| import inner membrane translocase subunit Tim44 [Brevundimonas
subvibrioides ATCC 15264]
Length = 214
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
FLI++FA I FV QL VLGKK G + + D + L
Sbjct: 5 FLIVIFAVIAAFVLFQLYNVLGKKVGRQ-------------PQDDAKAPPALPATGPDAP 51
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
L + + L + + FDP F++ AR +YE IV + G A++ L+
Sbjct: 52 LRTPG----VDATLLAAAASLRARDPAFDPAKFIDGARQAYETIVRGYAAGDRAALKPLL 107
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF---ISA 187
V F ++ R++ + + + + AS E + +R + + I
Sbjct: 108 TPAVLDSFETGIAARETRGETEQVEFLHPPRADLELASAEGDRAVAKVRFLAELRSKIMP 167
Query: 188 SYDKDNLLISSDPEIFG-KVIDIWTFVRNIPPSNPNWVL 225
D+ ++P I + + WTF R++ S+PNWVL
Sbjct: 168 PADEATPGAPAEPRIEERRTAEHWTFERSLGASDPNWVL 206
>gi|258541896|ref|YP_003187329.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01]
gi|256632974|dbj|BAH98949.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01]
gi|256636031|dbj|BAI02000.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-03]
gi|256639086|dbj|BAI05048.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-07]
gi|256642140|dbj|BAI08095.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-22]
gi|256645195|dbj|BAI11143.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-26]
gi|256648250|dbj|BAI14191.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-32]
gi|256651303|dbj|BAI17237.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654294|dbj|BAI20221.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-12]
Length = 242
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L A + F+ L+LR VLGK+ G + P + + R + GK ++ +
Sbjct: 28 LVLLALVAAFLVLRLRSVLGKRVGIQ-PVQVKLQVRPDAAPR-----VVEGKPEQAETAA 81
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ P GTR+ ++ DI F P+ FLN A+ ++ +V ++ +G V ++ +
Sbjct: 82 EFDIPAP-GTRVGTLLADIRQKDPSFTPQQFLNGAQIAFAQVVGAYAQGNVDVLKTYLTP 140
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSL-----VGIDDMKIINASIEENT-VYITIRIVGQFIS 186
V F ++ R + E+ ++ + + I+D++I + +E T I +RIV IS
Sbjct: 141 AVLAAFEAGITARANAEETQRTDVKAIRSLAIEDVRI--SPMEAGTAAAIDVRIVSDQIS 198
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+K+ ++ + + D+WTF R + + W L + +
Sbjct: 199 LVLNKEGQPVTGT-DAVTEFSDLWTFERLLDVNGSTWRLAAAR 240
>gi|295691579|ref|YP_003595272.1| import inner membrane translocase subunit Tim44 [Caulobacter segnis
ATCC 21756]
gi|295433482|gb|ADG12654.1| import inner membrane translocase subunit Tim44 [Caulobacter segnis
ATCC 21756]
Length = 198
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL A + V QL LG++ G ++ E + G G
Sbjct: 4 ILFLAAVAAIVLYQLYATLGRRVG----------------RQPEDTPVKAGAGGPA---- 43
Query: 73 SINELFPIGTRLNKVMRD-----IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
P+ T + V+R + + DFDP F+ AR +YE IV ++ +G ++
Sbjct: 44 ------PVTTDPHPVLRSEGLAALKARQPDFDPAKFMTGARAAYEQIVTAYADGDRETLK 97
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+ V +F +++ R++ ++ K + + + + + +T +RI+ + +
Sbjct: 98 PLLAPEVMANFEQAMAAREAAGRSEKVEFLTSPRLDLESVDLVGDTAKAVVRILAEVRTR 157
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ D+ + + ++WTF R + +NPNW+L
Sbjct: 158 TKDERGEGVDDR-----RTAELWTFEREVRNANPNWLL 190
>gi|218680118|ref|ZP_03528015.1| import inner membrane translocase subunit Tim44 [Rhizobium etli
CIAT 894]
Length = 78
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 163 KIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN 222
+I +A + + IT+RI+ Q ISA+YDK ++LI D E +V D+WTF R+ +PN
Sbjct: 8 EITHAETKGSEAQITVRIISQLISATYDKADVLIEGDAENVAEVNDLWTFARDTRSRDPN 67
Query: 223 WVLISTK 229
W L++T+
Sbjct: 68 WKLVATE 74
>gi|167648993|ref|YP_001686656.1| import inner membrane translocase subunit Tim44 [Caulobacter sp.
K31]
gi|167351423|gb|ABZ74158.1| import inner membrane translocase subunit Tim44 [Caulobacter sp.
K31]
Length = 199
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F ++ A + + QL LG++ G + P + + RD + + G
Sbjct: 2 FEWIILAALAAVILYQLYATLGRRVGRQ-PEDAPAAVPASVAPRDVKTLEVPG------- 53
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
++++ L + R DFD FL+ AR +YE IV +F G ++ L+
Sbjct: 54 -EALSGLAALRAR-----------QADFDIGHFLSGARQAYEMIVKAFAAGDRETLKPLL 101
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ V +F +++ R++ + K+ + + + +E + +RI+ + + S
Sbjct: 102 AADVMANFEAAIADREAAGRTEKAEFLATPRTDLDSIKVEGDVARAVVRILAEVRTRSTS 161
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ D + D+WTF R++ NPNW L+ + E
Sbjct: 162 A-----AGDAVDDRRTADLWTFERDLKSRNPNWTLVRVDVAE 198
>gi|222474811|ref|YP_002563226.1| hypothetical protein AMF_080 [Anaplasma marginale str. Florida]
gi|255002781|ref|ZP_05277745.1| hypothetical protein AmarPR_00408 [Anaplasma marginale str. Puerto
Rico]
gi|222418947|gb|ACM48970.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 219
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+ ++AF+ F+F +L G LGK + S F ++ ++ G++ +
Sbjct: 6 LAIYAFVAAFIFFRLYGSLGKAS------SVNFQPSAIYPEQ--------AGGEQAASDG 51
Query: 73 SINEL-FPIGT---------RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
SIN P+ + +++ V I F K F+ + ++EAIV + +G
Sbjct: 52 SINSQDIPVSSVVADCASVEQISSVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGN 111
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ L+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V
Sbjct: 112 AEFLSSLLSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVT 171
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ I+ D ++ + D W F R+I S W L ST
Sbjct: 172 EQINVVRDAGGQVVDGSTSKVNTIEDTWKFARDITTSGRRWYLTST 217
>gi|255003915|ref|ZP_05278716.1| hypothetical protein AmarV_00428 [Anaplasma marginale str.
Virginia]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+ ++AF+ F+F +L G LGK + S F ++ ++ G++ +
Sbjct: 4 LAIYAFVAAFIFFRLYGSLGKAS------SVNFQPSAIYPEQ--------AGGEQAASDG 49
Query: 73 SINEL-FPIGT---------RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
SIN P+ + +++ V I F K F+ + ++EAIV + +G
Sbjct: 50 SINSQDIPVSSVVADCASVEQISSVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGN 109
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ L+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V
Sbjct: 110 AEFLSSLLSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVT 169
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ I+ D ++ + D W F R+I S W L ST
Sbjct: 170 EQINVVRDAGGQVVDGSTSKVNTIEDTWKFARDITTSGRRWYLTST 215
>gi|16127971|ref|NP_422535.1| hypothetical protein CC_3741 [Caulobacter crescentus CB15]
gi|221236793|ref|YP_002519230.1| transporter [Caulobacter crescentus NA1000]
gi|13425513|gb|AAK25703.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965966|gb|ACL97322.1| transporter [Caulobacter crescentus NA1000]
Length = 234
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 29/215 (13%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F IL A + V QL LG++ G + E +T G
Sbjct: 41 FQILFLAAVAALVLYQLYSTLGRRVGRQP----------------EDAAVTAMPGAAPAP 84
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+D + + + T + + DFDP FL R +YE IV ++ EG + L+
Sbjct: 85 VDPVLQAEGVAT--------LRARQPDFDPARFLMGVRAAYEQIVKAYAEGDRETLTPLL 136
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V +F ++ R++ + K + + + + +T +RI+ + + + D
Sbjct: 137 APDVMDNFERAMVARETAGRTEKVEFLTPPRVDLERVDVVGDTAKAVVRILAEVRTRTKD 196
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ + + ++WTF R + ++PNW L
Sbjct: 197 ERGEGVDDR-----RTAELWTFEREVKSTDPNWHL 226
>gi|42520013|ref|NP_965928.1| hypothetical protein WD0107 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42409750|gb|AAS13862.1| conserved domain protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 216
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
++++A + F+F +L LG+ N K + R ++ +G +
Sbjct: 4 LVIYALLAAFIFSRLYNSLGRSANLNLKKLTNVLD-----VSRSREDVVENIEGY----I 54
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
DS +E + + I+ DF F+ + ++E I+ F +G + ++ L+D
Sbjct: 55 DSNDE-----NSIKVTYKQILKKNKDFSISHFIEGSSIAFELIIKCFNQGNLSQLKPLLD 109
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y +F + + RK +++ +V I KI+ + +N V+I + + + I+ +
Sbjct: 110 KDLYDNFAEKIKHRKEVHESI---IVSIVSQKILEIKLVKNAVFIAVYFLSEQINFVKNN 166
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ +IS KV D+W F +N+ S+P+W+L+S
Sbjct: 167 EGDIISGSTSTINKVEDVWQFKKNVNSSDPSWLLVS 202
>gi|254994672|ref|ZP_05276862.1| hypothetical protein AmarM_00445 [Anaplasma marginale str.
Mississippi]
Length = 217
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+ ++AF+ F+F +L G LGK + S F ++ ++ G++ +
Sbjct: 4 LAIYAFVAAFIFFRLYGSLGKAS------SVNFQPSAIYPEQ--------AGGEQAASDG 49
Query: 73 SINEL-FPIGTRLNKV--MRDIVSVYT-------DFDPKDFLNEARNSYEAIVDSFFEGK 122
SIN P+ + + + I SV+ F K F+ + ++EAIV + +G
Sbjct: 50 SINSQDIPVSSVVADCASVEQIASVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGN 109
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ L+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V
Sbjct: 110 AEFLSSLLSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVT 169
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ I+ D ++ + D W F R+I S W L ST
Sbjct: 170 EQINVVRDAGGQVVDGSTSKVNTIEDTWKFERDITTSGRRWYLTST 215
>gi|58584799|ref|YP_198372.1| hypothetical protein Wbm0542 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419115|gb|AAW71130.1| Uncharacterized conserved protein related to eukaryotic translocase
of inner mitochondrial membrane [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 218
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
++++A + FVF +L LG+ T N K + S+ E + + +D +
Sbjct: 4 LVIYALLAAFVFSRLYNSLGRSTSLNLKKLTSVLD----ISQVREDVVENI-----EDYI 54
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
DS N+ PI ++++ DF F+ + +E I+ F +G + ++ L+D
Sbjct: 55 DS-NDKDPIKATYEQILQK----NKDFSISHFMEGSGVVFELIIKYFNQGNLSQLKPLLD 109
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y +F + RK + +S +V I KI+ + +N V+I + + + I+ +
Sbjct: 110 KDLYNNFAGKIKQRK---EIYESIIVSIVSQKILEIKLVKNVVFIAVYFLSEQINFVKND 166
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+IS KV D+W F +N+ SNP+W+L S
Sbjct: 167 KGDVISGSTSTINKVEDVWQFKKNVTSSNPSWLLTS 202
>gi|56416441|ref|YP_153515.1| hypothetical protein AM113 [Anaplasma marginale str. St. Maries]
gi|56387673|gb|AAV86260.1| hypothetical protein AM113 [Anaplasma marginale str. St. Maries]
Length = 217
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+ ++AF+ F+F +L G LGK + S F ++ ++ G++ +
Sbjct: 4 LAIYAFVAAFIFFRLYGSLGKAS------SVNFQPSAIYPEQ--------AGGEQAASDG 49
Query: 73 SINEL-FPIGT---------RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
SIN P+ + +++ V I F K F+ + ++EAIV + +G
Sbjct: 50 SINSQDIPVSSVVADCASVEQISSVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGN 109
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ L+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V
Sbjct: 110 AEFLSSLLSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVT 169
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ I+ D ++ + D W F R+I S W L ST
Sbjct: 170 EQINVVRDAGGQVVDGSTSKVNTIEDTWKFERDITTSGRRWYLTST 215
>gi|114799709|ref|YP_758741.1| Tim44 domain-containing protein [Hyphomonas neptunium ATCC 15444]
gi|114739883|gb|ABI78008.1| Tim44 domain protein [Hyphomonas neptunium ATCC 15444]
Length = 204
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A + FV +L LG+ G+E P KR G + + ++ +N
Sbjct: 8 VLILAAVALFVLWRLYSALGRG-GDEGPVQ---RPAPTPEKRPTPGEMPAPQPRRIENER 63
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
I G + DI + F ++F+ A+ +Y+ IV ++ G +A+ L+D
Sbjct: 64 PIFTGPAAG-----ALEDIYNADRSFSTEEFMRGAKAAYQLIVGAYARGDRNALRPLLDD 118
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY+ ++ +++ R + L+ I +I A ++ + + +R +
Sbjct: 119 DVYEAWDAAIAERDATGARA-FELLRIKKAEIDRAELDGSMARVMVRYEAEL-------- 169
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
D E V +IWTF+R++ S+PNW+L
Sbjct: 170 -----GDGETTRIVREIWTFMRDVSSSDPNWLL 197
>gi|99034421|ref|ZP_01314428.1| hypothetical protein Wendoof_01000767 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 198
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN 148
+ I+ DF F+ + ++E I+ F +G + ++ L+D +Y +F + + RK
Sbjct: 49 KQILKKNKDFSISHFIEGSSIAFELIIKCFNQGNLSQLKPLLDKDLYDNFAEKIKHRKEV 108
Query: 149 EKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVID 208
+++ +V I KI+ + +N V+I + + + I+ + + +IS KV D
Sbjct: 109 HESI---IVSIVSQKILEIKLVKNAVFIAVYFLSEQINFVKNNEGDIISGSTSTINKVED 165
Query: 209 IWTFVRNIPPSNPNWVLIS 227
+W F +N+ S+P+W+L+S
Sbjct: 166 VWQFKKNVNSSDPSWLLVS 184
>gi|225677153|ref|ZP_03788152.1| hypothetical protein WUni_006480 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590820|gb|EEH12048.1| hypothetical protein WUni_006480 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 216
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
++++A + F+F +L LG+ N K + R ++ +G +
Sbjct: 4 LVIYALLAAFIFSRLYNSLGRSANLNLKKLTNVLD-----VSRSREDVVENIEGY----I 54
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
DS +E + + I+ DF F+ + ++E I+ F +G + ++ L+D
Sbjct: 55 DSNDE-----NSIKVTYKQILKKNKDFSISHFIEGSSIAFELIIKCFNQGNLSQLKPLLD 109
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y +F + + RK +++ +V I KI+ + +N V+I + + + I+ +
Sbjct: 110 KDLYDNFAEKIKHRKEVHESI---IVSIVSQKILEIKLVKNAVFIAVYFLSEQINFVKNN 166
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+IS KV D+W F +N+ S+P+W+L+S
Sbjct: 167 KGDIISGSTSTINKVEDVWQFKKNVNSSDPSWLLVS 202
>gi|58696732|ref|ZP_00372276.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698125|ref|ZP_00373048.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225629991|ref|YP_002726782.1| hypothetical protein WRi_001450 [Wolbachia sp. wRi]
gi|58535371|gb|EAL59447.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58537084|gb|EAL60206.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
simulans]
gi|225591972|gb|ACN94991.1| hypothetical protein WRi_001450 [Wolbachia sp. wRi]
Length = 216
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DF F+ + ++E I+ F +G + ++ L+D +Y +F + + RK +++ +
Sbjct: 75 DFSISHFIEGSSIAFELIIKYFNQGNLSQLKPLLDKDLYDNFAEKIKHRKEVHESI---I 131
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V I KI+ + +N V+I + + + I+ + + +IS KV D+W F +N+
Sbjct: 132 VSIVSQKILEIKLVKNVVFIAVYFLSEQINFVKNNEGDIISGSTSTINKVEDVWQFKKNV 191
Query: 217 PPSNPNWVLIS 227
S+P+W+L+S
Sbjct: 192 NSSDPSWLLVS 202
>gi|56552532|ref|YP_163371.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260753807|ref|YP_003226700.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|56544106|gb|AAV90260.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ZM4]
gi|258553170|gb|ACV76116.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 217
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 27 LRGVLGKKTGNEKPFSGFFS-GKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLN 85
L VLG++TG+E+ F+ V ++ + ++ + KK++ + +
Sbjct: 18 LYNVLGRRTGHEQSFTKPAEVSTTVVAQPNTALLMPASEQKKREEI--------VQPEAW 69
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+R IVS FD F+ A+++Y I+++F++ + +V V++ F + R
Sbjct: 70 DGIRRIVSRDAHFDLTGFIEGAKSAYGKILEAFWQNDRSKLADMVSKDVFEAFQQVIEKR 129
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
++ +++ LV ID + A IE + IT+ + + + ++I+
Sbjct: 130 EAEGSRLENRLVNIDKALVQKAGIEGDNAIITVSYDAWISTMLRNHEGIMIAGSSTDALP 189
Query: 206 VIDIWTFVRNIPPS-NPNWVLIST 228
D+WTF R+I NW+L+ T
Sbjct: 190 THDVWTFSRSIKQEPKTNWLLVET 213
>gi|218459911|ref|ZP_03500002.1| putative translocase transmembrane protein [Rhizobium etli Kim 5]
Length = 59
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 176 ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IT+RIV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 2 ITVRIVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATE 55
>gi|11992022|gb|AAG42409.1|AF300471_12 unknown [Zymomonas mobilis subsp. mobilis ZM4]
Length = 201
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 27 LRGVLGKKTGNEKPFSGFFS-GKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLN 85
L VLG++TG+E+ F+ V ++ + ++ + KK++ + +
Sbjct: 2 LYNVLGRRTGHEQSFTKPAEVSTTVVAQPNTALLMPASEQKKREEI--------VQPEAW 53
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+R IVS FD F+ A+++Y I+++F++ + +V V++ F + R
Sbjct: 54 DGIRRIVSRDAHFDLTGFIEGAKSAYGKILEAFWQNDRSKLADMVSKDVFEAFQQVIEKR 113
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
++ +++ LV ID + A IE + IT+ + + + ++I+
Sbjct: 114 EAEGSRLENRLVNIDKALVQKAGIEGDNAIITVSYDAWISTMLRNHEGIMIAGSSTDALP 173
Query: 206 VIDIWTFVRNIPPS-NPNWVLIST 228
D+WTF R+I NW+L+ T
Sbjct: 174 THDVWTFSRSIKQEPKTNWLLVET 197
>gi|241762227|ref|ZP_04760309.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|241373274|gb|EER62893.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 217
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 27 LRGVLGKKTGNEKPFSGFFS-GKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLN 85
L VLG++TG+E+ F+ V ++ + ++ + KK++ + +
Sbjct: 18 LYNVLGRRTGHEQSFTKPTEVSTTVVAQPNTALLMPASEQKKREEI--------VQPEAW 69
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+R IVS FD F+ A+++Y I+++F++ + +V V++ F + R
Sbjct: 70 DGIRRIVSRDAHFDLTGFIEGAKSAYGKILEAFWQNDRSKLADMVSKDVFEAFQQVIEKR 129
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
++ +++ LV ID + A IE + IT+ + + + ++I+
Sbjct: 130 EAEGSRLENRLVNIDKALVQKAGIEGDNAIITVSYDAWISTMLRNHEGIMIAGSSTDALP 189
Query: 206 VIDIWTFVRNIPPS-NPNWVLIST 228
D+WTF R+I NW+L+ T
Sbjct: 190 THDVWTFSRSIKQEPKTNWLLVET 213
>gi|254417984|ref|ZP_05031708.1| Tim44-like domain superfamily [Brevundimonas sp. BAL3]
gi|196184161|gb|EDX79137.1| Tim44-like domain superfamily [Brevundimonas sp. BAL3]
Length = 213
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 32/225 (14%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGI----ITLGKG 65
F I++FA I V QL VLGK+ G + + D + + + +
Sbjct: 4 QFQIVIFAVIAAIVLFQLYNVLGKRVGRQP-------------QEDAKALPSSPTSTAEA 50
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
K LD+ G + RD FDP F+ AR +YE IV + G A
Sbjct: 51 SKTPALDAATLASIAGLK----ARDPA-----FDPNRFVEGARQAYETIVRGYAAGDRAA 101
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ L+ V F+ ++ R++ + + + A+++ + +R + +
Sbjct: 102 LTPLLTPNVMASFDAGIAARETRGETETVEFLFPPRADLEGATVQGDKAVAKVRFLAELR 161
Query: 186 S----ASYDKDNLLISSDPEIFG-KVIDIWTFVRNIPPSNPNWVL 225
S AS D + ++ +P + + + WTF R + ++PNWVL
Sbjct: 162 SRVTKASGDTAD-SVTGEPLVEERRTAEHWTFERTLGAADPNWVL 205
>gi|329891166|ref|ZP_08269509.1| tim44-like domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846467|gb|EGF96031.1| tim44-like domain protein [Brevundimonas diminuta ATCC 11568]
Length = 205
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 26/218 (11%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKP---FSGFFSGKYVFSKRDERGIITLGKGKK 67
F I++FA I + QL VLGKK G + + RG +
Sbjct: 3 FQIVIFAVIAAVLLFQLYNVLGKKVGRQPEDNPKPVPVPAAPAGAPEAARGPV------- 55
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ L + + + +FDP FL AR +YE IV ++ +G A+
Sbjct: 56 ------------VDPALTAAIAGLKTRDPNFDPHRFLEGARQAYETIVRAYAKGDRDALR 103
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+ +V F ++ R++ LV + A+ E + +R + + +
Sbjct: 104 PLLTDKVMGSFEAGIAAREARGDAESVELVHAPRADLELATTEGDRALAKVRFLAEVRGS 163
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
++ + + +IWTF R + S+PNW L
Sbjct: 164 LTPSGGETVTEE----RRTAEIWTFERRLGASDPNWAL 197
>gi|330993443|ref|ZP_08317378.1| putative transporter protein [Gluconacetobacter sp. SXCC-1]
gi|329759473|gb|EGG75982.1| putative transporter protein [Gluconacetobacter sp. SXCC-1]
Length = 258
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 8 SGDFLI--LLFAFITFFVFLQLRGVLGKKTGNE---KPFSGFFSGKYVFSKRDERGIITL 62
SG F + ++ + F+ L+LR +LG++ G E +P + + + +
Sbjct: 35 SGHFPLDLVVLGLVAVFLVLRLRSILGRRVGAEPAVRPMAAQPAAQ------------PM 82
Query: 63 GKGKKKDNLDSINELFPIG-TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ + +I P TR+ V+ I ++ F P++F ++ IV ++ G
Sbjct: 83 VEKPVEPPPPAITYEIPTPDTRVGGVLARIAALQPGFTPQEFARGTETAFRQIVGAYAAG 142
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT-----VYI 176
+ + + + + + F ++ +R+ + ++S + I D+ II A ++E I
Sbjct: 143 DLDVLRERLTAATFGAFEAAIQSRQQAGEVLRSEIRDITDIAIIGAEVDEAAGPSPLARI 202
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTK 229
+RIV IS + D ++ + + D+WTF R + + P W L +++
Sbjct: 203 EVRIVSDQISLTVDSSGHPVAGV-DAVTEFSDLWTFERLLGVNAPGAGWRLGASR 256
>gi|190571472|ref|YP_001975830.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018875|ref|ZP_03334683.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357744|emb|CAQ55195.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995826|gb|EEB56466.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 219
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
++++A + F+F +L LG+ N K +G S+ E + + ++
Sbjct: 4 LVIYALLAAFIFSRLYNSLGRSASLNLKKLTGVLD----VSQSKEDVVENIEDYIYSNDK 59
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
SI + + NK +F +F+ + ++E I+ F +G + ++ L+D
Sbjct: 60 SSIETTYEQILQKNK----------EFSISNFIEGSSIAFELIIKYFNQGNLPQLKSLLD 109
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y F D + RK +++ +V I KI+ + +N ++I + + + I+ +
Sbjct: 110 KDLYNSFVDKIKHRKETHESI---IVSIVSQKILEIKLVKNVIFIAVYFLSEQINFVKNN 166
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ + S KV D+W F +NI S+ W+L+S
Sbjct: 167 EGNITSGSMSTINKVEDVWQFKKNINSSDLTWLLVS 202
>gi|197103473|ref|YP_002128850.1| hypothetical protein PHZ_c0007 [Phenylobacterium zucineum HLK1]
gi|196476893|gb|ACG76421.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 205
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 23/221 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+++FA + V QL VLG++ G + +++ +G + +D
Sbjct: 6 LIIFAGLAAIVLYQLYSVLGRRVGRQP---------------EDQAAAEPAQGSVR-AVD 49
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ E G L + + ++ FD FL A+ +YE IV +F +G ++ L+
Sbjct: 50 RMAEPADDGVALTGLAA-VKALDPSFDVGHFLGGAKQAYEMIVRAFADGDRATLKNLLAP 108
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV-YITIRIVGQFISASYDK 191
+V F ++ R++ + + A + + +T+R + +F S +
Sbjct: 109 QVLASFEAAIDQREAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAEFRSRTKGP 168
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + + ++WTF RN+ +PNW+L+ E
Sbjct: 169 EGEAVDDR-----RTAELWTFERNLKSRDPNWMLVHVDAAE 204
>gi|254796736|ref|YP_003081572.1| hypothetical protein NRI_0348 [Neorickettsia risticii str.
Illinois]
gi|254589983|gb|ACT69345.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 208
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L+A + FF+F +L G+ E+ F + + I+ KK +D
Sbjct: 3 LVLYAILVFFIFNRLYASFGR-VSVERELG--------FKAAEVKEILE----KKVRAID 49
Query: 73 SINELFPIGTRLNKVM---RDIVSVY-TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ P + L +++ ++I S++ DF F+ A ++E +F + + + K
Sbjct: 50 QFTYVAP--SDLQEIVSAKKEIESLWKQDFSTDRFMEGAERAFEMFTKAFTDCDLKVLSK 107
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ + + ++ ++ RK ++ +LV + +I + + +Y T+R V + I+
Sbjct: 108 LLSKKAFSVVSEKVAQRKIRGNTLERTLVALRSKNLIKLDVIKGVLYATVRFVSEQINVV 167
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
D ++S D + + D W F R++ N +WV+
Sbjct: 168 RDDAGRILSGDHDTIEVIEDKWVFERSLRSPNNSWVVC 205
>gi|88608273|ref|YP_506249.1| Tim44-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600442|gb|ABD45910.1| Tim44-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 208
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L+A + FF+F +L G+ + + GF + + + I+ KK ++D
Sbjct: 3 LILYAILVFFIFNRLYASFGRISVEREL--GFKAAEV-------KEILE----KKVRDID 49
Query: 73 SINELFPIGTRLNKVM---RDIVSVY-TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ P + L +++ ++I S++ DF F+ A ++E +F + + + K
Sbjct: 50 QFTYVAP--SDLQEIVSAKKEIESLWKQDFSTDRFMEGAERAFEMFTKAFTDCDLKVLSK 107
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ + + ++ + RK ++ +LV + +I + + +Y T+R V + I+
Sbjct: 108 LLSKKAFSVVSEKIEQRKIRGNTLERTLVALRSKNLIKLDVIKGVLYATVRFVSEQINVV 167
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
D ++S D + + D W F R++ + +WV+
Sbjct: 168 RDDAGRVLSGDHDTIEVIEDKWIFERSLKSPHNSWVVC 205
>gi|329847374|ref|ZP_08262402.1| tim44-like domain protein [Asticcacaulis biprosthecum C19]
gi|328842437|gb|EGF92006.1| tim44-like domain protein [Asticcacaulis biprosthecum C19]
Length = 212
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+++FA + + QL VLG+K G R E +T+ KG +L
Sbjct: 4 LIIFAIVAVVILFQLYNVLGRKVGF----------------RAEDKPVTV-KGDDFGDLS 46
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ + P +R+ + + + +F+ +FL +AR SYE +V +F +G++ A++ +
Sbjct: 47 TKTDKLPEASRMPN-LEMLKTRDANFNELNFLEKARESYEQVVIAFHKGELDAVKDKLSD 105
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY F +L R + E+ + S V I + ++ I +R + + + Y+K
Sbjct: 106 TVYGIFAKALVGRAAPEETL--SFVDQPKADIDHIDFKDEVAQIRVRFLSELV---YEKT 160
Query: 193 NLLISS--------DPEI---FGKVIDIWTFVRNIPPSNPNWVL 225
S P++ + + WTF + + +N W+L
Sbjct: 161 EAPAESAVPPTKADAPKVHRSHKRTAEYWTFQKGMKVANSPWLL 204
>gi|149192059|ref|ZP_01870285.1| hypothetical protein VSAK1_02529 [Vibrio shilonii AK1]
gi|148834122|gb|EDL51133.1| hypothetical protein VSAK1_02529 [Vibrio shilonii AK1]
Length = 294
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 34/224 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+F I F +F +RG+LG K G N++ F G T + +++ N
Sbjct: 97 ILIFGLIAFVIFKFMRGMLGAKQGSMNQQRQQPAFGGN------------TRNQFEQQPN 144
Query: 71 LDSI----NELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ N G D+ Y FD FLN AR Y + ++ ++H
Sbjct: 145 FQNFEQPQNGGAATGGFGAAGHSDVPHNYPPGFDQAAFLNGAREHYRILQGAWNHNELHT 204
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
IE+ V + QD ++ R E + ++ + D +I+ A + N ++++ G++
Sbjct: 205 IEEYVSPSLLQDL---MAERAKLEGEQHTDVMYV-DAEIVRADFDANKAQLSLQFSGRYR 260
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A + + D E DIW R++ N W+++ +
Sbjct: 261 DAVEN-----VEEDIE------DIWHLERDLTVPNAPWLIVGIQ 293
>gi|58617502|ref|YP_196701.1| hypothetical protein ERGA_CDS_07750 [Ehrlichia ruminantium str.
Gardel]
gi|58417114|emb|CAI28227.1| Hypothetical protein ERGA_CDS_07750 [Ehrlichia ruminantium str.
Gardel]
Length = 213
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
+ ++AF+ F+F +L LG+ +G + +P S + + D T
Sbjct: 4 LAIYAFVAAFIFFRLYNSLGRTSGLQPNNHSQPVS-------ILIQEDNNHDYT------ 50
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
++D + + +M I +F K F++ + +++ I+ +F EG + +
Sbjct: 51 --DIDIESVMESCDDNDQSIMNTIKRKDREFSLKYFMDGSMKAFDIIIKAFNEGNIQILC 108
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+D +Y F + RK+ + + +V I KI + N +IT++ + + I+
Sbjct: 109 SLLDKDLYNSFLTEIEYRKNLGQVYEDVIVSIIYHKITKLKLSGNIAHITVKFISEQINF 168
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIP-PSNPNWVLISTK 229
D++ ++ K+ D+WTF +++ ++ W L S +
Sbjct: 169 VKDQEGNILQGSTSKINKIEDVWTFKKDMSLLTSKKWYLSSIQ 211
>gi|57239470|ref|YP_180606.1| hypothetical protein Erum7440 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579448|ref|YP_197660.1| hypothetical protein ERWE_CDS_07840 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161549|emb|CAH58476.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418074|emb|CAI27278.1| Hypothetical protein ERWE_CDS_07840 [Ehrlichia ruminantium str.
Welgevonden]
Length = 213
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
+ ++AF+ F+F +L LG+ +G + +P S + + D T
Sbjct: 4 LAIYAFVAAFIFFRLYNSLGRTSGLQPNNHSQPVS-------ILIQEDNNHDYT------ 50
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
++D + + +M I +F K F++ + +++ I+ +F EG +
Sbjct: 51 --DIDIESVMESCDDNDKSIMSTIKRKDREFSLKYFMDGSMKAFDIIIKAFNEGNTQILC 108
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+D +Y F + RK+ + + +V I KI + N +IT++ + + I+
Sbjct: 109 SLLDKDLYNSFLTEIEYRKNLGQVYEDVIVSIIHHKITKLKLSGNIAHITVKFISEQINF 168
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIP-PSNPNWVLISTK 229
D++ ++ K+ D+WTF +++ ++ W L S +
Sbjct: 169 VKDQEGNILQGSTSKINKIEDVWTFKKDMSLLTSKKWYLSSIQ 211
>gi|317050977|ref|YP_004112093.1| import inner membrane translocase subunit Tim44 [Desulfurispirillum
indicum S5]
gi|316946061|gb|ADU65537.1| import inner membrane translocase subunit Tim44 [Desulfurispirillum
indicum S5]
Length = 249
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 14/223 (6%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
+S F I FI +F +R + G+ + N P + G +D + +
Sbjct: 28 NSATFSIFDILFIGAIIFFIVRALRGRTSRNNNPKDDWTLGG---KDQDSYSPTASNEPR 84
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
D I L+P T +K +R I +F DFL AR + + + ++ I
Sbjct: 85 TTPGADKITSLYPEQT-THKGLRPIEMSDPNFTEGDFLAAAREVFSTVQQAKANEELEQI 143
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E L+D + + ++T + K V+ I + +A + T IT++
Sbjct: 144 EFLMDKAMLNQLQEDIATWRKEGKRVQLDSATIHSALVADAIQQMGTDCITVK-----FE 198
Query: 187 ASYDKDNLL--ISSDPE-IFGKVIDIWTFVRNIPPSNPNWVLI 226
A+ D+ L + +PE + V + W F+RNI W LI
Sbjct: 199 ATLDRTFLPVDVEGEPEPVHETVTEYWRFMRNI--GEAAWQLI 239
>gi|88607695|ref|YP_504724.1| Tim44-like domain-containing protein [Anaplasma phagocytophilum HZ]
gi|88598758|gb|ABD44228.1| Tim44-like domain protein [Anaplasma phagocytophilum HZ]
Length = 241
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR--DERGIITLGKGKKKDN 70
+ ++AF+ F+F +L LG+ + S F G ++ D+R + ++
Sbjct: 30 LAIYAFVAAFIFFRLYSSLGRAS------SINFQGACATPEKPGDDRIALDAKNDQQDIP 83
Query: 71 LDSINE--LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
L S+ E F + +VMR + DF ++F+ + ++E I+ + G +
Sbjct: 84 LTSVTEEEHFEEVSPGIEVMR---ARSMDFSLRNFMAGSAAAFEVIMKALNRGDTELLSS 140
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ +Y+ F + R S + +V I KI A + + IT++ + + I+
Sbjct: 141 LLSDDIYKSFEKEIMRRNSEGHIHEDVVVSIVSQKITAAKVIGDVAAITVKFLTEQINVV 200
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +I+ V D WTF +N + W L +T
Sbjct: 201 RNAAGDVIAGSTSKINVVEDFWTFEKNANSPSRKWYLSAT 240
>gi|260767913|ref|ZP_05876847.1| hypothetical protein VFA_000962 [Vibrio furnissii CIP 102972]
gi|260615943|gb|EEX41128.1| hypothetical protein VFA_000962 [Vibrio furnissii CIP 102972]
gi|315179616|gb|ADT86530.1| Tim44-like domain family [Vibrio furnissii NCTC 11218]
Length = 291
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN------EKP-FSGFFSGKYVFSKRDERGIITLGKG 65
IL+ I F +F +RG+LG K G+ ++P F G +
Sbjct: 98 ILIIGLIAFVIFKLMRGLLGAKQGSMNQHQQQQPAFGGMNRNTF---------------- 141
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVH 124
++ N+ + + G +++ D+ Y D FD F+N AR Y + ++ ++
Sbjct: 142 -EQPNVHNFEQPQNSGGFGSQMQSDVPHNYPDGFDRVAFVNGAREHYRILQGAWNHNQLE 200
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
IE+ V +++D + R + + ++ ++ + D +I+ A + N ++++ G++
Sbjct: 201 TIEEYVSPSLFEDLK---AERAKIDTDPQTDVMYV-DAEIVRADYDANKAQLSLQFSGRY 256
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
S D + + DIW R++ N W+++ +
Sbjct: 257 RDPSEDLEE-----------NIDDIWHLERDLTTPNAPWLIVGIQ 290
>gi|163803720|ref|ZP_02197579.1| hypothetical protein 1103602000427_AND4_04363 [Vibrio sp. AND4]
gi|159172471|gb|EDP57338.1| hypothetical protein AND4_04363 [Vibrio sp. AND4]
Length = 288
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 47/228 (20%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN-----EKPFSGFFSGKYVFS-----KRDERGIITL 62
IL+ I F +F +RG+LG K G ++P G + K+ ++ T
Sbjct: 96 ILIMGLIAFVIFKLMRGMLGAKQGTMNQHRQQPAFGGNASKFEQPNMQNFEQQPNSAGTG 155
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G G K D I +P G FD F+N +R Y + ++ +
Sbjct: 156 GFGSKTD----IPHNYPPG----------------FDQAAFVNGSREHYRTLQGAWNHNQ 195
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+H IE+ V ++ D L ++ + + V D +I+ A + N ++++ G
Sbjct: 196 LHTIEEYVSPSLF----DDLKAERAKLDGEQHTDVMYVDAEIVRADYDANKAQLSLQFSG 251
Query: 183 QFISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ +D++ + D + DIW R++ N W+++ +
Sbjct: 252 RY------RDSVEGVEED------IQDIWHLERDLTVPNAPWLIVGIQ 287
>gi|315497202|ref|YP_004086006.1| import inner membrane translocase subunit tim44 [Asticcacaulis
excentricus CB 48]
gi|315415214|gb|ADU11855.1| import inner membrane translocase subunit Tim44 [Asticcacaulis
excentricus CB 48]
Length = 207
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 26/217 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG---NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+L+ A I V QL VLG++ G +KP V D G + K
Sbjct: 5 LLILALIAVVVLFQLYNVLGRRVGFKAEDKPV--------VPKTEDSEGPFNRPGQEPKA 56
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
P R+ + + S F+ +F+ +AR +YE IV +F G++ ++
Sbjct: 57 Q--------PERLRMPN-LDALKSRDAHFNEINFVEKAREAYEQIVLAFNRGEIEGLKDR 107
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ VY F ++ R +K + S V + ++++ + +R + + +
Sbjct: 108 LSESVYGVFAKAIEAR-GEQKAMTVSFVESPKTDLDQIDLKDDRASVRVRFLSELLYEMA 166
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNI-PPSNPNWVL 225
D D + + + WTF +N+ P+NP W+L
Sbjct: 167 DPDG---GEPKKAHRRTAEFWTFQKNLKSPTNP-WIL 199
>gi|302773644|ref|XP_002970239.1| hypothetical protein SELMODRAFT_441105 [Selaginella moellendorffii]
gi|300161755|gb|EFJ28369.1| hypothetical protein SELMODRAFT_441105 [Selaginella moellendorffii]
Length = 257
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS 154
+ ++ K F EA + Y+ I G + + +LV + + + R++ V
Sbjct: 112 HKGYNQKVFYREATDLYKEINKLSAAGDLGKLRRLVTEHFFSVIKNQIKQRQAAYSRVHW 171
Query: 155 SLVG-IDDMKIINASI--------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+VG I M+ + + + V IT+RI I A+YDK+N +I D E
Sbjct: 172 EMVGQIKLMRTLQGRLIGIDRKDLDNAFVQITLRIQSNQIFAAYDKNNNIIKGDLEKPLL 231
Query: 206 VIDIWTFVRNIPPSNPNWVLI 226
V DIW F +++ + W L
Sbjct: 232 VEDIWIFEKHLTRPDSTWRLC 252
>gi|302793266|ref|XP_002978398.1| hypothetical protein SELMODRAFT_418250 [Selaginella moellendorffii]
gi|300153747|gb|EFJ20384.1| hypothetical protein SELMODRAFT_418250 [Selaginella moellendorffii]
Length = 260
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS 154
+ ++ K F EA + Y+ I G + + +LV + + + R++ V
Sbjct: 115 HKGYNQKVFYREATDLYKEINKLSAAGDLGKLRRLVTEHFFSVIKNQIKQRQAAYSRVHW 174
Query: 155 SLVG-IDDMKIINASI--------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+VG I M+ + + + V IT+RI I A+YDK+N +I D E
Sbjct: 175 EMVGQIKLMRTLQGRLIGIDRKDLDNAFVQITLRIQSNQIFAAYDKNNNIIKGDLEKPLL 234
Query: 206 VIDIWTFVRNIPPSNPNWVLI 226
V DIW F +++ + W L
Sbjct: 235 VEDIWIFEKHLTRPDSTWRLC 255
>gi|37679309|ref|NP_933918.1| hypothetical protein VV1125 [Vibrio vulnificus YJ016]
gi|320156948|ref|YP_004189327.1| hypothetical protein VVM_03684 [Vibrio vulnificus MO6-24/O]
gi|326424146|ref|NP_761953.2| hypothetical protein VV1_3163 [Vibrio vulnificus CMCP6]
gi|37198052|dbj|BAC93889.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319932260|gb|ADV87124.1| hypothetical protein VVMO6_02102 [Vibrio vulnificus MO6-24/O]
gi|319999531|gb|AAO11480.2| hypothetical protein VV1_3163 [Vibrio vulnificus CMCP6]
Length = 289
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 46/228 (20%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGK---------YVFSKRDERGIIT 61
IL+ I F +F +RG+L K G N+ F G+ + F +
Sbjct: 96 ILIIGLIAFVIFKLMRGLLASKQGSMNQHRQQPAFGGQAPKFEQSNVHNFEQSPNTPTGG 155
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
G G + D + +P G FD F+N AR Y + ++
Sbjct: 156 FGFGAQSD----VPHNYPPG----------------FDQVAFVNGAREHYRILQGAWNHN 195
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
++ IE+ V +++D L ++ + + V D +I+ A + +T +++++
Sbjct: 196 QLETIEEYVSPSLFED----LKAERAKLDGEQHTDVMYVDAQIVRADYDASTAHLSLQFS 251
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G++ A I D + DIW R++ N W+++ +
Sbjct: 252 GRYRDAVEG-----IEED------ITDIWHLERDLTAPNAPWMIVGIQ 288
>gi|86148689|ref|ZP_01066968.1| hypothetical protein MED222_20209 [Vibrio sp. MED222]
gi|218710150|ref|YP_002417771.1| hypothetical protein VS_2180 [Vibrio splendidus LGP32]
gi|85833536|gb|EAQ51715.1| hypothetical protein MED222_20209 [Vibrio sp. MED222]
gi|218323169|emb|CAV19346.1| hypothetical protein VS_2180 [Vibrio splendidus LGP32]
Length = 307
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 92/224 (41%), Gaps = 29/224 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN--------EKP-FSGFFSGKYVFSKRDERGIITLG 63
IL+ I F F LRG+LG K G+ ++P F G K+ K+ + +
Sbjct: 99 ILIMGLIAFLAFKFLRGMLGAKQGSMNQQNARGQQPAFGGMGQNKFEQPKQ-QPNVHNFE 157
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVY-TDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ + + S N G D+ Y FD F+N +R Y + ++ +
Sbjct: 158 QAQPQSQPHSQNSAGGFGF---GAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNE 214
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
++ IE+ V +++D L ++ + + V D +I+ A + + ++++ G
Sbjct: 215 LNTIEEYVSPSLFED----LKAERNKLDGDQHTDVMYVDAEIVRADHDGSKAQLSLQFSG 270
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
++ + I D + DIW R++ N W+++
Sbjct: 271 RYRDTADG-----IEED------ITDIWHLERDLTTQNAPWLIV 303
>gi|261253352|ref|ZP_05945925.1| hypothetical protein VIA_003377 [Vibrio orientalis CIP 102891]
gi|260936743|gb|EEX92732.1| hypothetical protein VIA_003377 [Vibrio orientalis CIP 102891]
Length = 292
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +R +LG K G N++ F G K ++ + N
Sbjct: 98 ILIMGLIAFVIFKLMRSMLGAKQGSMNQQRQQPAFGGSA--PKFEQPNV---------HN 146
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ G D+ Y FD F+N +R Y + ++ ++H IE+
Sbjct: 147 FEQPQNAPQGGGFGFGAQTDVPHNYPPGFDQSAFINGSREHYRILQGAWNHNQLHTIEEY 206
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +Y+D L ++ + + V D +I+ A + ++++ G++ A
Sbjct: 207 VSPSLYED----LKAERAKLNGEQHTDVMYVDAEIVRADHDATKAQLSLQFSGRYRDAVE 262
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
I D + DIW R++ N W+++
Sbjct: 263 G-----IEED------ITDIWHLERDLTTPNAPWLIV 288
>gi|258626499|ref|ZP_05721339.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258581210|gb|EEW06119.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 290
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +RG+L K G N+ +SG + F + + ++G G
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGSMNQSQQQPAYSGMNRTSFEQPNVHNFEQPQSMGGG 156
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P+G FD F+N AR Y + ++ ++
Sbjct: 157 FGSAAQSDVPHNYPVG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 200
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 201 IREYVSPSLFED----LQAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 256
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 257 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 289
>gi|28897713|ref|NP_797318.1| hypothetical protein VP0939 [Vibrio parahaemolyticus RIMD 2210633]
gi|28805926|dbj|BAC59202.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|328473305|gb|EGF44153.1| hypothetical protein VP10329_21550 [Vibrio parahaemolyticus 10329]
Length = 290
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G SK ++ + N
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNA--SKFEQPNM---------QN 144
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ G D+ Y FD F+N +R Y + ++ ++ IE+
Sbjct: 145 FEQQPNTNAGGFTGFGAQTDVPHNYPPGFDQAAFINGSREHYRILQGAWNHNQLDTIEEY 204
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +++D L ++ + + + V D +I+ A + N ++++ G++ A+
Sbjct: 205 VSPSLFED----LKAERAKLEGEQHTDVMYVDAEIVRAEYDANKAQLSLQFSGRYRDAAE 260
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ D E DIW R++ N W+++ +
Sbjct: 261 G-----VEEDIE------DIWHLERDLTVPNAPWLIVGIQ 289
>gi|260878333|ref|ZP_05890688.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus AN-5034]
gi|308092753|gb|EFO42448.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus AN-5034]
Length = 287
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 29/218 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G SK ++ + N
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNA--SKFEQPNM---------QN 144
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ G D+ Y FD F+N +R Y + ++ ++ IE+
Sbjct: 145 FEQQPNTNAGGFTGFGAQTDVPHNYPPGFDQAAFINGSREHYRILQGAWNHNQLDTIEEY 204
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +++D L ++ + + + V D +I+ A + N ++++ G++ A+
Sbjct: 205 VSPSLFED----LKAERAKLEGEQHTDVMYVDAEIVRAEYDANKAQLSLQFSGRYRDAAE 260
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ D E DIW R++ N W+++
Sbjct: 261 G-----VEEDIE------DIWHLERDLTVPNAPWLIVG 287
>gi|61806584|ref|NP_001013525.1| mitochondrial import inner membrane translocase subunit TIM44
[Danio rerio]
gi|60649493|gb|AAH90431.1| Translocase of inner mitochondrial membrane 44 homolog (yeast)
[Danio rerio]
gi|182891522|gb|AAI64677.1| Timm44 protein [Danio rerio]
Length = 452
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D I + D I LF T +++V+ +I+ V FD
Sbjct: 255 FNRFFEMKMKYDESD-NAFIRASRAVTDKMTDIIGGLFS-KTEMSEVLTEILKVDPTFDK 312
Query: 101 KDFLNEA-RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + ++ I+++ +G++ ++ Y + K+ S ++ I
Sbjct: 313 DSFLKQCEKDIIPNILEAMIQGELDVLKDWCYEATYSQLAHPIQQAKAMGLQFHSKILDI 372
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DPE +++ +W R+
Sbjct: 373 DNIDLAMGKMMEQGPVLIITFQAQLVMVIRNVKGEVVEGDPEKVLRMMYVWALCRDQEEL 432
Query: 220 NPN--WVLI 226
NPN W L+
Sbjct: 433 NPNAAWRLL 441
>gi|262166075|ref|ZP_06033812.1| hypothetical protein VMA_002525 [Vibrio mimicus VM223]
gi|262025791|gb|EEY44459.1| hypothetical protein VMA_002525 [Vibrio mimicus VM223]
Length = 290
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +RG+L K G N+ +SG + F + + ++G G
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGSMNQSQQQPAYSGMNRTSFEQPNVHNFEQPQSMGGG 156
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 157 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 200
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 201 IREYVSPSLFED----LQAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 256
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 257 DAVEG-----------IEENIEDVWHLERDLTVQNAPWLIVGIQ 289
>gi|148907785|gb|ABR17018.1| unknown [Picea sitchensis]
Length = 190
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 17/172 (9%)
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
+G K+ D I+E F + K+ + T + F EA Y+ I +G
Sbjct: 22 RGWKRSKEDLISE-FKTAYAIAKLRK-----LTKYSKPKFYEEAIQLYKEINSHLAQGDR 75
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL----VGIDDMKIINASIEENT-----V 174
++ +LV +Y F + R++ V + V I ++ ++++N V
Sbjct: 76 TSLRQLVTENMYTIFKREIKQRETTWSRVHWEMIEPTVRIRTLRARMIAVDKNNLDNAFV 135
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
IT+ I+ A+YD +LI+ D ++ V DIW F R++ W L
Sbjct: 136 QITLEILTNQKFAAYDLKGILITEDSKVL--VEDIWVFERSLFQPGARWRLC 185
>gi|258621272|ref|ZP_05716306.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|262171047|ref|ZP_06038725.1| hypothetical protein VII_001862 [Vibrio mimicus MB-451]
gi|258586660|gb|EEW11375.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261892123|gb|EEY38109.1| hypothetical protein VII_001862 [Vibrio mimicus MB-451]
Length = 290
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +RG+L K G N+ +SG + F + + ++G G
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGSMNQSQQQPAYSGMNRTSFEQPNVHNFEQPQSMGGG 156
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 157 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 200
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 201 IREYVSPSLFED----LQAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 256
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 257 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 289
>gi|269965560|ref|ZP_06179674.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829785|gb|EEZ84020.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 290
Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 29/217 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N+ F G SK ++ + N
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNA--SKFEQPNM---------QN 144
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ G D+ Y FD F+N +R Y + ++ ++ IE+
Sbjct: 145 FEQQPNTNNGGFGGFGAQTDVPHNYPPGFDQAAFINGSREHYRILQGAWNHNQLETIEEY 204
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +++D L ++ + + V D +I+ A + N ++++ G++
Sbjct: 205 VSPSLFED----LKAERAKLDGEQHTDVMYVDAEIVRADYDANKAQLSLQFSGRY----- 255
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
+D + + ++ DIW R++ N W+++
Sbjct: 256 -RDTVEGVEE-----EIEDIWHLERDLTAPNAPWLIV 286
>gi|148977909|ref|ZP_01814462.1| hypothetical protein VSWAT3_01775 [Vibrionales bacterium SWAT-3]
gi|145962855|gb|EDK28127.1| hypothetical protein VSWAT3_01775 [Vibrionales bacterium SWAT-3]
Length = 304
Score = 42.4 bits (98), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIIT----LGKGK-- 66
IL+ I F F LRG+LG K G+ ++++ RG +G+ K
Sbjct: 100 ILIMGLIAFLAFKFLRGMLGAKQGS-------------MNQQNARGQQPAFGGMGQNKFE 146
Query: 67 ---KKDNLDSINELFPIGTRLNKV-----MRDIVSVYT-DFDPKDFLNEARNSYEAIVDS 117
++ N+ + + P D+ Y FD F+N +R Y + +
Sbjct: 147 QPTQQPNVHNFEQAQPQSQGTAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGA 206
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
+ ++ IE+ V +++D L +S + + V D +I+ A + + ++
Sbjct: 207 WNHNELSTIEEYVSPSLFED----LKAERSKLDGDQHTDVMYVDAEIVRADHDGSKAQLS 262
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
++ G++ ++ I D + DIW R++ N W+++
Sbjct: 263 LQFSGRYRDSAEG-----IEED------ITDIWHLERDLTTDNAPWLIV 300
>gi|261210612|ref|ZP_05924905.1| hypothetical protein VCJ_000865 [Vibrio sp. RC341]
gi|260840397|gb|EEX66968.1| hypothetical protein VCJ_000865 [Vibrio sp. RC341]
Length = 289
Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +RG+L K G N+ F G + F + + ++G G
Sbjct: 96 ILIMGLIAFVIFKLMRGLLASKQGSMNQSQQQPAFGGMNRTPFEQPNVHNFEQPQSMGGG 155
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
I +P G FD F+N AR Y + ++ ++
Sbjct: 156 FGSAAQSDIPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 199
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V ++ D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 200 IREYVSPSLF----DDLKAERANYEGEQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 255
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 256 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 288
>gi|117923796|ref|YP_864413.1| import inner membrane translocase, subunit Tim44 [Magnetococcus sp.
MC-1]
gi|117607552|gb|ABK43007.1| import inner membrane translocase, subunit Tim44 [Magnetococcus sp.
MC-1]
Length = 331
Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/137 (18%), Positives = 60/137 (43%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
++FD F++ A+ +E + S+ + ++ L+ ++ ++ + ++N +
Sbjct: 195 SNFDEFTFIDGAKRCFEMLQTSWSTFDMTTLQGLLTPQMMEEVENHARQLQANGQRDVVK 254
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRN 215
V + ++ A E+ Y+T+R + D ++S D +V + W F R
Sbjct: 255 NVHFSEAALVEAWSEQGQDYLTVRFDVSLVEYVEDASGQVVSGDANHPQQVQEFWVFTRA 314
Query: 216 IPPSNPNWVLISTKLGE 232
NPNW L + + +
Sbjct: 315 QGARNPNWQLSAIQQAQ 331
>gi|239947276|ref|ZP_04699029.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921552|gb|EER21576.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 211
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I FF+ +L LG + E+ + G+ V S ++E+ I T
Sbjct: 8 LLIFAVIAFFIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSTVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAVVDGMEQVHNRLYS----FDPVKFINNAKTAFQMIIEAAYKKDT 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R ++F
Sbjct: 124 QELSELIDKRYLEEF 138
>gi|254507626|ref|ZP_05119759.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus 16]
gi|219549513|gb|EED26505.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus 16]
Length = 292
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 29/217 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G K ++ + N
Sbjct: 98 ILIIGLIAFVIFKLMRGMLGAKQGSMNQQRQQPAFGGSA--PKFEQPNV---------HN 146
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + G D+ Y FD F+N +R Y + ++ ++ IE+
Sbjct: 147 FEQPQQTGSQGGFGFGSQTDVPHNYPPGFDHAAFINGSREHYRILQGAWNHNQLETIEEY 206
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ D L + ++ + + + V D +I+ A + + ++++ G++ A
Sbjct: 207 VSPSLFAD----LKSERAKLEGEQHTDVMYVDAEIVRADYDASKAQLSLQFSGRYRDAVE 262
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
I D + DIW R++ N W+++
Sbjct: 263 G-----IEED------IADIWHLERDLTVPNAPWLIV 288
>gi|67459060|ref|YP_246684.1| hypothetical protein RF_0668 [Rickettsia felis URRWXCal2]
gi|67004593|gb|AAY61519.1| unknown [Rickettsia felis URRWXCal2]
Length = 211
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 49/230 (21%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I F++ +L LG + E+ + G+ V S ++E+ I T
Sbjct: 8 LLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSTVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAVVDGMEQVHKHLYS----FDPIKFINNAKTAFQMIIEAAYKKDA 123
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE-----NTVYITI 178
+ +L+D R ++F + + S D+ ++A E N ++I +
Sbjct: 124 KELSELIDKRYLEEF-----------EKITPSYGDFFDLSALSAKYSEIYMFGNNIFIKL 172
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDI---WTFVRNIPPSNPNWVL 225
G+ + K+ D+ WTF RN +W L
Sbjct: 173 LFQGK-----------------NVVDKIEDLKEEWTFTRNANTKEVDWFL 205
>gi|326678158|ref|XP_003201001.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Danio rerio]
gi|94734038|emb|CAK04039.1| novel protein containing a Tim44-like domain (zgc:110764) [Danio
rerio]
Length = 452
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D I + D I LF T +++V+ +I+ V FD
Sbjct: 255 FNRFFEMKMKYDESD-NAFIRASRAVTDKMTDIIGGLFS-KTEMSEVLTEILKVDPSFDK 312
Query: 101 KDFLNEA-RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + ++ I+++ +G++ ++ Y + K+ S ++ I
Sbjct: 313 DSFLKQCEKDIIPNILEAMIQGELDVLKDWCYEATYSQLAHPIQQAKAMGLQFHSKILDI 372
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 373 DNIDLAMGKMMEQGPVLIITFQAQLVMVIRNVKGEVVEGDPDKVLRMMYVWALCRDQEEL 432
Query: 220 NPN--WVLI 226
NPN W L+
Sbjct: 433 NPNAAWRLL 441
>gi|157803805|ref|YP_001492354.1| hypothetical protein A1E_03170 [Rickettsia canadensis str. McKiel]
gi|157785068|gb|ABV73569.1| hypothetical protein A1E_03170 [Rickettsia canadensis str. McKiel]
Length = 211
Score = 42.0 bits (97), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I FF+ +L LG E+ + G+ V S + E+ + T+
Sbjct: 8 LLIFALIAFFIINKLITTLGSTAEEEQTKQKSYFGEPVIKDVTYSAVKSNKAEKNLPTVE 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFQDIIVEQNITAVVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDT 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +LVD R ++F
Sbjct: 124 QELSELVDKRYLEEF 138
>gi|157964519|ref|YP_001499343.1| hypothetical protein RMA_0619 [Rickettsia massiliae MTU5]
gi|157844295|gb|ABV84796.1| hypothetical protein RMA_0619 [Rickettsia massiliae MTU5]
Length = 211
Score = 42.0 bits (97), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA ITF++ +L LG + E+ + G+ + S ++E+ I T
Sbjct: 8 LLIFAVITFYIINKLITTLGSTSEEEQTNQKSYFGEPIIKDVTYSTVKSNKEEKNIPTTQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAVVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDA 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R +F
Sbjct: 124 KELSELIDKRYLAEF 138
>gi|84387756|ref|ZP_00990772.1| hypothetical protein V12B01_05945 [Vibrio splendidus 12B01]
gi|84377439|gb|EAP94306.1| hypothetical protein V12B01_05945 [Vibrio splendidus 12B01]
Length = 302
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN--------EKP-FSGFFSGKYVFSKRDERGIITLG 63
IL+ I F F LRG+LG K G+ ++P F G K+
Sbjct: 98 ILIMGLIAFLAFKFLRGMLGAKQGSMNQQNARGQQPAFGGMGQNKFE------------- 144
Query: 64 KGKKKDNLDSINELFPIGTRLNKV-----MRDIVSVYT-DFDPKDFLNEARNSYEAIVDS 117
+ K++ N+ + + P D+ Y FD F+N +R Y + +
Sbjct: 145 QPKQQPNVHNFEQAQPQSQGAAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGA 204
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
+ +++ IE+ V +++D L ++ + + V D +I+ A + + ++
Sbjct: 205 WNHNELNTIEEYVSPSLFED----LKAERNKLDGDQHTDVMYVDAEIVRADHDGSKAQLS 260
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
++ G++ + + D + DIW R++ +N W+++
Sbjct: 261 LQFSGRYRDTADG-----VEED------ITDIWHLERDLTTNNAPWLIV 298
>gi|262404319|ref|ZP_06080874.1| hypothetical protein VOA_002310 [Vibrio sp. RC586]
gi|262349351|gb|EEY98489.1| hypothetical protein VOA_002310 [Vibrio sp. RC586]
Length = 290
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +RG+L K G N +SG + F + + ++G G
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGSMNHSQQQPAYSGMNRTSFEQPNVHNFEQPQSMGGG 156
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 157 FGSTAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 200
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + V D +I+ A + N ++++ G++
Sbjct: 201 IREYVSPSLFED----LKAERANYAGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 256
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 257 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 289
>gi|59712270|ref|YP_205046.1| Tim44-like domain-contain protein [Vibrio fischeri ES114]
gi|59480371|gb|AAW86158.1| Tim44-like domain family [Vibrio fischeri ES114]
Length = 297
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 20/218 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ A I F +F R ++ K G+ G Y + + + ++ D
Sbjct: 98 ILIMAGIAFILFKVFRSMMAAKAGSMNQRQG---AAYAGPQGQQDAQPSFRDNQQYFQAD 154
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
P G D+ Y FD + F+N +R Y + ++ ++ I++ V
Sbjct: 155 QATAQ-PTGGFGAASADDVPHNYPPGFDMQAFINGSREHYRILQGAWNHNQLETIQEYVS 213
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y ND + R + E + ++ + D +++ A + N ++++ G++ A
Sbjct: 214 ISLY---NDLVQERATLEGEQHTDVMYV-DAEVVRADYDANRAQLSLQFSGRYRDAVEG- 268
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I D + DIW R++ N W++I +
Sbjct: 269 ----IEED------ITDIWHLERDLTQPNAPWLIIGIQ 296
>gi|229586715|ref|YP_002845216.1| hypothetical protein RAF_ORF0564 [Rickettsia africae ESF-5]
gi|228021765|gb|ACP53473.1| Unknown [Rickettsia africae ESF-5]
Length = 211
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I F++ +L LG + E+ + G+ V S ++E+ I T
Sbjct: 8 LLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSIVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAVVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDA 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R ++F
Sbjct: 124 KELSELIDKRYLEEF 138
>gi|15892527|ref|NP_360241.1| hypothetical protein RC0604 [Rickettsia conorii str. Malish 7]
gi|15619688|gb|AAL03142.1| unknown [Rickettsia conorii str. Malish 7]
Length = 211
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I F++ +L LG + E+ + G+ + S ++E+ I T
Sbjct: 8 LLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPIIKDVTYSIVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + I + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAIVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDA 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R ++F
Sbjct: 124 KELSELIDKRYLEEF 138
>gi|34580481|ref|ZP_00141961.1| hypothetical protein [Rickettsia sibirica 246]
gi|157828477|ref|YP_001494719.1| hypothetical protein A1G_03400 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933195|ref|YP_001649984.1| hypothetical protein RrIowa_0720 [Rickettsia rickettsii str. Iowa]
gi|28261866|gb|EAA25370.1| unknown [Rickettsia sibirica 246]
gi|157800958|gb|ABV76211.1| hypothetical protein A1G_03400 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908282|gb|ABY72578.1| hypothetical protein RrIowa_0720 [Rickettsia rickettsii str. Iowa]
Length = 211
Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I F++ +L LG + E+ + G+ V S ++E+ I T
Sbjct: 8 LLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSIVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAVVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDA 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R ++F
Sbjct: 124 KELSELIDKRYLEEF 138
>gi|53804400|ref|YP_113719.1| hypothetical protein MCA1256 [Methylococcus capsulatus str. Bath]
gi|53758161|gb|AAU92452.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 204
Score = 41.6 bits (96), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+LLFA I FF++ +L + +P +G +G Y S+ G G+ + D
Sbjct: 15 LLLFAGIGFFLYR----LLAARGSQPQPAAG--AGYYPHSENP--GGANPVSGRPAFDTD 66
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
++ + S DFD FLN A+ +Y + ++ E + + L
Sbjct: 67 LLSR--------RGGAQPAQSQPADFDTTGFLNGAKAAYRQLQAAWDERDLGTLRALTTD 118
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+V+ + D L R S E++ ++ ++A I + +R G + D
Sbjct: 119 KVFAELQDQL--RASAERHST-------ELLRVDAEI------LEVRDRGDEREVAVLFD 163
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
L + E V ++W FVR+ P W L
Sbjct: 164 VTLREAPAEEAAVVHEVWHFVRSRSSRQPTWFL 196
>gi|197334926|ref|YP_002156484.1| import inner membrane translocase, subunit Tim44 [Vibrio fischeri
MJ11]
gi|197316416|gb|ACH65863.1| import inner membrane translocase, subunit Tim44 [Vibrio fischeri
MJ11]
Length = 297
Score = 41.6 bits (96), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 20/218 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ A I F +F R ++ K G+ G Y + + + ++ D
Sbjct: 98 ILIMAGIAFILFKVFRSMMAAKAGSMNQRQG---AAYAGPQGQQDAQPSFRDNQQYFQAD 154
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
P G D+ Y FD + F+N +R Y + ++ ++ I++ V
Sbjct: 155 QATTQ-PTGGFGAASADDVPHNYPPGFDMQSFINGSREHYRILQGAWNHNQLETIQEYVS 213
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y ND + R + E + ++ + D +++ A + N ++++ G++ A
Sbjct: 214 ISLY---NDLVQERATLEGEQHTDVMYV-DAEVVRADHDANRAQLSLQFSGRYRDAVEG- 268
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I D + DIW R++ N W++I +
Sbjct: 269 ----IEED------ITDIWHLERDLTQPNAPWLIIGIQ 296
>gi|323491921|ref|ZP_08097090.1| hypothetical protein VIBR0546_04127 [Vibrio brasiliensis LMG 20546]
gi|323313779|gb|EGA66874.1| hypothetical protein VIBR0546_04127 [Vibrio brasiliensis LMG 20546]
Length = 292
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN-----EKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
IL+ I F +F +RG+LG K G+ ++P G + K+ +
Sbjct: 98 ILIMGLIAFVIFKLMRGMLGSKQGSMNKNRQQPAFGGSAPKF--------------EQPN 143
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
N + G DI Y FD F+N +R Y + ++ ++ I
Sbjct: 144 VHNFEQPQSGAQGGGFGFGAQSDIPHNYPPGFDQTAFINGSREHYRILQGAWNHNQLETI 203
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E+ V +++D L + ++ + + + V D +I+ A + + ++++ G++
Sbjct: 204 EEYVSPSLFED----LKSERAKLEGEQHTDVMYVDAEIVRADYDASKAQLSLQFSGRY-- 257
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
+D++ I + DIW R++ N W+++
Sbjct: 258 ----RDSV-----EGIEENIEDIWHLERDLTTPNAPWLIV 288
>gi|262394794|ref|YP_003286648.1| hypothetical protein VEA_004023 [Vibrio sp. Ex25]
gi|262338388|gb|ACY52183.1| hypothetical protein VEA_004023 [Vibrio sp. Ex25]
Length = 290
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 29/220 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N+ F G SK ++ + N
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNA--SKFEQPNM---------QN 144
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ G D+ Y FD F+N +R Y + ++ ++ IE+
Sbjct: 145 FEQQPNTNNGGFGGFGAQTDVPHNYPPGFDQAAFINGSREHYRILQGAWNHNQLETIEEY 204
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +++D L ++ + + V D +I+ A N ++++ G++
Sbjct: 205 VSPSLFED----LKAERAKLDGEQHTDVMYVDAEIVRADYNANKAQLSLQFSGRY----- 255
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+D + + ++ DIW R++ N W+++ +
Sbjct: 256 -RDTVEGVEE-----EIEDIWHLERDLTVPNAPWLIVGIQ 289
>gi|238650294|ref|YP_002916146.1| hypothetical protein RPR_00625 [Rickettsia peacockii str. Rustic]
gi|238624392|gb|ACR47098.1| hypothetical protein RPR_00625 [Rickettsia peacockii str. Rustic]
Length = 211
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I F++ +L LG + E+ + G+ V S ++E+ I T
Sbjct: 8 LLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSIVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKVFKDIIVEHNITAVVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDA 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R ++F
Sbjct: 124 KELSELIDKRYLEEF 138
>gi|312882412|ref|ZP_07742153.1| hypothetical protein VIBC2010_18049 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369812|gb|EFP97323.1| hypothetical protein VIBC2010_18049 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 281
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +R +LG K G N+ F G SK ++ + K+
Sbjct: 85 ILIMGIIAFVIFKLVRAMLGAKQGSLNQHRQQPAFGGSA--SKFEQPNVNQF----KEQQ 138
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ N+ G D+ Y FD F+N +R Y + ++ ++ IE+
Sbjct: 139 QPTTNQTGGFGF---SAQSDVPHNYPPGFDNAAFVNGSREHYRLLQGAWNHNQLDTIEEY 195
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ D L T ++ + + V D +I+ A + + ++++ G++
Sbjct: 196 VSQSLF----DDLKTERAKLSGEQHTDVMFVDAEIVRADYDASKAQLSLQFSGRY----- 246
Query: 190 DKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
+D + I D + DIW R++ N W+++
Sbjct: 247 -RDTVEGIEED------ITDIWHLERDLTTPNAPWLIV 277
>gi|25009742|gb|AAN71045.1| AT09326p [Drosophila melanogaster]
gi|40882559|gb|AAR96191.1| AT24717p [Drosophila melanogaster]
Length = 459
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 301 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 360
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 361 PIKEAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 420
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 421 EKVMRVHYVWVLCRDRNELNPKAAWRLM 448
>gi|260776293|ref|ZP_05885188.1| hypothetical protein VIC_001677 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607516|gb|EEX33781.1| hypothetical protein VIC_001677 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 292
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ + F +F +RG+LG K G N++ F G K ++ + N
Sbjct: 98 ILIMGLVAFIIFKLMRGLLGSKQGSMNQQRQQPAFGGSA--PKFEQPNV---------HN 146
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + G DI Y FD F+N +R Y + ++ ++ IE+
Sbjct: 147 FEQQPQSGSQGGFGFGAQSDIPHNYPPGFDKVAFINGSREHYRTLQGAWNHNQLDTIEEY 206
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +++D L ++ + + + V D +I+ A + + ++++ G++ A
Sbjct: 207 VSPSLFED----LKAERAKLEGEQHTDVMYVDAEIVRADYDASKAQLSLQFSGRYRDAVE 262
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + + DIW R++ N W+++ +
Sbjct: 263 NVEE-----------NIEDIWHLERDLTVPNAPWLIVGIQ 291
>gi|24648138|ref|NP_650786.2| CG11779, isoform A [Drosophila melanogaster]
gi|78706780|ref|NP_001027193.1| CG11779, isoform D [Drosophila melanogaster]
gi|7300484|gb|AAF55639.1| CG11779, isoform A [Drosophila melanogaster]
gi|71854566|gb|AAZ52532.1| CG11779, isoform D [Drosophila melanogaster]
Length = 459
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 301 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 360
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 361 PIKEAKKAGVYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 420
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 421 EKVMRVHYVWVLCRDRNELNPKAAWRLM 448
>gi|323499402|ref|ZP_08104378.1| hypothetical protein VISI1226_21579 [Vibrio sinaloensis DSM 21326]
gi|323315587|gb|EGA68622.1| hypothetical protein VISI1226_21579 [Vibrio sinaloensis DSM 21326]
Length = 292
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYV--FSKRD----ERGIITLGK 64
IL+ I F +F +RG+LG K G N+ F G+ F + + E+
Sbjct: 98 ILIIGLIAFLIFKLMRGMLGAKQGSMNQHRQQPAFGGQSAPKFEQPNVHNFEQPQTGSQG 157
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G + +P G FD F+N +R Y + ++ ++
Sbjct: 158 GFGFGGQTDVPHNYPPG----------------FDHAAFINGSREHYRILQGAWNHNQLE 201
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
IE+ V +Y+D L ++ + + V D +I+ A + + ++++ G++
Sbjct: 202 TIEEYVSPSLYED----LKAERAKLDGEQHTDVMYVDAEIVRADYDASKAQLSLQFSGRY 257
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A + + DIW R++ N W+++ +
Sbjct: 258 RDAVEGVEE-----------NIEDIWHLERDLTTPNAPWLIVGIQ 291
>gi|269961023|ref|ZP_06175392.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834242|gb|EEZ88332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 303
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 17/178 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N+ F G SK ++ + + N
Sbjct: 108 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNA--SKFEQPNMQNFEQQPNNTN 165
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
DI Y FD F+N +R Y + ++ ++H IE+
Sbjct: 166 AGG--------FGGFGAQTDIPHNYPPGFDQAAFINGSREHYRILQGAWNHNQLHTIEEY 217
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
V +++D L ++ + + V D +I+ A + N ++++ G++ A
Sbjct: 218 VSPSLFED----LKAERAKLDGEQHTDVMYVDAEIVRADYDANKAQLSLQFSGRYRDA 271
>gi|195497862|ref|XP_002096280.1| GE25149 [Drosophila yakuba]
gi|194182381|gb|EDW95992.1| GE25149 [Drosophila yakuba]
Length = 459
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 301 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 360
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 361 PIKEAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 420
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 421 EKVMRVHYVWVLCRDRNELNPKAAWRLM 448
>gi|229521878|ref|ZP_04411295.1| hypothetical protein VIF_002420 [Vibrio cholerae TM 11079-80]
gi|229340803|gb|EEO05808.1| hypothetical protein VIF_002420 [Vibrio cholerae TM 11079-80]
Length = 291
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 87/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 157
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P+G FD F+N AR Y + ++ ++
Sbjct: 158 FGSAAQSDVPHNYPVG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 202 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 257
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 258 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|195108009|ref|XP_001998585.1| GI24055 [Drosophila mojavensis]
gi|193915179|gb|EDW14046.1| GI24055 [Drosophila mojavensis]
Length = 452
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-----NSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
T L++ M ++V + +FD K FL++ N EAIV G + ++ Y
Sbjct: 294 TELSETMTELVKIDPNFDQKQFLHDCEKDIIPNVLEAIV----RGDLEILKDWCFESTYN 349
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
++ K + S ++ I+++++ + E + I Q I D+ ++
Sbjct: 350 IIATPITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKGQVV 409
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
DPE +V +W R+ NP W L+
Sbjct: 410 EGDPEKVMRVHYVWVLCRDRNELNPKAAWRLM 441
>gi|195353703|ref|XP_002043343.1| GM10044 [Drosophila sechellia]
gi|194127457|gb|EDW49500.1| GM10044 [Drosophila sechellia]
Length = 458
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 300 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 359
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 360 PIKEAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 419
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 420 EKVMRVHYVWVLCRDRNELNPKAAWRLM 447
>gi|24648140|ref|NP_732403.1| CG11779, isoform B [Drosophila melanogaster]
gi|7300485|gb|AAF55640.1| CG11779, isoform B [Drosophila melanogaster]
Length = 428
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 270 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 329
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 330 PIKEAKKAGVYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 389
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 390 EKVMRVHYVWVLCRDRNELNPKAAWRLM 417
>gi|195569739|ref|XP_002102866.1| GD20131 [Drosophila simulans]
gi|194198793|gb|EDX12369.1| GD20131 [Drosophila simulans]
Length = 304
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 146 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 205
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 206 PIKEAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 265
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 266 EKVMRVHYVWVLCRDRNELNPKAAWRLM 293
>gi|63093891|dbj|BAD98172.1| hypothetical protein [Drosophila parabipectinata]
Length = 460
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD K+FL++ I+++ G + ++ Y
Sbjct: 302 TELSETMTELVKIDPSFDQKEFLHDCETDIIPNILEAIVRGDLEILKDWCFESTYNIIAT 361
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ K + S ++ I+++++ + E + I Q I D+ ++ DP
Sbjct: 362 PITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVEGDP 421
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 422 EKVMRVHYVWVLCRDRNELNPKAAWRLM 449
>gi|194900032|ref|XP_001979561.1| GG16152 [Drosophila erecta]
gi|190651264|gb|EDV48519.1| GG16152 [Drosophila erecta]
Length = 459
Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 301 TELSETMTELVKIDPCFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 360
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 361 PIKEAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 420
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 421 EKVMRVHYVWVLCRDRNELNPKAAWRLM 448
>gi|153826379|ref|ZP_01979046.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739857|gb|EDM54048.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 223
Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 30 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 89
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 90 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 133
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 134 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 189
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 190 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 222
>gi|157825721|ref|YP_001493441.1| hypothetical protein A1C_03235 [Rickettsia akari str. Hartford]
gi|157799679|gb|ABV74933.1| hypothetical protein A1C_03235 [Rickettsia akari str. Hartford]
Length = 211
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I F++ +L LG + E+ + G+ V S ++E+ I T
Sbjct: 8 LLIFAVIAFYIINKLITTLGSTSEEEQTRQKSYFGEPVIKDVTYSTVKSNKEEKNIPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K ++ + + + + +V + + S FDP F+N A+ +++ I+++ ++
Sbjct: 68 DIKAFKDIIVEHNITAVVDGMEQVHKRLYS----FDPVKFINNAKTAFQMIIEAAYKKDS 123
Query: 124 HAIEKLVDSRVYQDF 138
+ +L+D R + F
Sbjct: 124 KELSELIDKRYLEAF 138
>gi|195452294|ref|XP_002073291.1| GK13236 [Drosophila willistoni]
gi|194169376|gb|EDW84277.1| GK13236 [Drosophila willistoni]
Length = 457
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T L++ M ++V + +FD K+FL++ I+ + E V ++ ++
Sbjct: 299 TELSETMTELVKIDPNFDQKEFLHDCETD---IIPNILEAIVRGDLDILKDWCFESTYSI 355
Query: 142 LSTRKSNEKN----VKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
+ST N K + S ++ I+++++ + E + I Q I D+ ++
Sbjct: 356 ISTPILNAKKTGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVE 415
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
DPE +V +W R+ NP W L+
Sbjct: 416 GDPEKVMRVHYVWVLCRDRNELNPKAAWRLM 446
>gi|153820281|ref|ZP_01972948.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126509172|gb|EAZ71766.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
Length = 239
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 46 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 105
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 106 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 149
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 150 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 205
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 206 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 238
>gi|312385733|gb|EFR30159.1| hypothetical protein AND_00421 [Anopheles darlingi]
Length = 340
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 25 LQLRGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPI 80
++ RG+L + E+PF +G YV + D R +G K+ +I +L
Sbjct: 83 MKERGILPPRPWLERPFYISCTGGVFEPYVPPEGDGRMSAISREGAKQ----AIEQL-EK 137
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T+ +R I S DFD +DF +A++ Y + E + + ++V R Y +
Sbjct: 138 KTKSMMAIRKIRSYDEDFDARDFATQAQDIYIQAHQTMCEKNKYKLREIVTERAYPELMH 197
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASI-----EENT-VYITIRIVGQFISASYDKDNL 194
+++ + + +KS ++ ++++A +EN +T+R Q + A YD+
Sbjct: 198 NVADKTIRWQFIKS----LEPPRVVHARCTDVITKENIFAQVTVRFHSQQLLAIYDRFGR 253
Query: 195 LISSDPEIFGKVIDIWTFVRNI 216
L+ I ++ F +++
Sbjct: 254 LMHGSETIEKDCLEYVVFEKHL 275
>gi|195037110|ref|XP_001990008.1| GH18477 [Drosophila grimshawi]
gi|193894204|gb|EDV93070.1| GH18477 [Drosophila grimshawi]
Length = 452
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-----NSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
T L++ M ++V + +FD K+FL++ N EAIV G + ++ Y
Sbjct: 294 TELSETMTELVKIDPNFDQKEFLHDCEKDIIPNVLEAIV----RGDLEILKDWCFESTYN 349
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
++ K + + S ++ I+++++ + E + I Q I D+ ++
Sbjct: 350 IIATPITQAKKSGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVV 409
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
DP+ +V +W R+ NP W L+
Sbjct: 410 EGDPDKVMRVHYVWVLCRDRNELNPKAAWRLM 441
>gi|63093892|dbj|BAD98173.1| hypothetical protein [Drosophila parabipectinata]
Length = 428
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD K+FL++ I+++ G + ++ Y
Sbjct: 270 TELSETMTELVKIDPSFDQKEFLHDCETDIIPNILEAIVRGDLEILKDWCFESTYNIIAT 329
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ K + S ++ I+++++ + E + I Q I D+ ++ DP
Sbjct: 330 PITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVEGDP 389
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 390 EKVMRVHYVWVLCRDRNELNPKAAWRLM 417
>gi|327484501|gb|AEA78908.1| hypothetical protein VCLMA_A1705 [Vibrio cholerae LMA3894-4]
Length = 291
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 157
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 158 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 202 IREYVSPSLFED----LKAERANYEGDQHTNVMYVDAEIVRADYDANRAQLSLQFSGRYR 257
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 258 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|229529012|ref|ZP_04418402.1| hypothetical protein VCG_002105 [Vibrio cholerae 12129(1)]
gi|229332786|gb|EEN98272.1| hypothetical protein VCG_002105 [Vibrio cholerae 12129(1)]
Length = 291
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSLNQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 157
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 158 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 202 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 257
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 258 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|15641966|ref|NP_231598.1| hypothetical protein VC1964 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590647|ref|ZP_01677981.1| hypothetical protein VC274080_2004 [Vibrio cholerae 2740-80]
gi|121728634|ref|ZP_01681653.1| hypothetical protein VCV52_1929 [Vibrio cholerae V52]
gi|147674189|ref|YP_001217491.1| hypothetical protein VC0395_A1550 [Vibrio cholerae O395]
gi|153217402|ref|ZP_01951153.1| hypothetical protein A55_2172 [Vibrio cholerae 1587]
gi|153801838|ref|ZP_01956424.1| hypothetical protein A51_B2032 [Vibrio cholerae MZO-3]
gi|153822436|ref|ZP_01975103.1| hypothetical protein A5E_2262 [Vibrio cholerae B33]
gi|229507945|ref|ZP_04397450.1| hypothetical protein VCF_003177 [Vibrio cholerae BX 330286]
gi|229511819|ref|ZP_04401298.1| hypothetical protein VCE_003228 [Vibrio cholerae B33]
gi|229518956|ref|ZP_04408399.1| hypothetical protein VCC_002983 [Vibrio cholerae RC9]
gi|229523980|ref|ZP_04413385.1| hypothetical protein VCA_001559 [Vibrio cholerae bv. albensis
VL426]
gi|229607490|ref|YP_002878138.1| hypothetical protein VCD_002402 [Vibrio cholerae MJ-1236]
gi|254226808|ref|ZP_04920380.1| hypothetical protein VCV51_1323 [Vibrio cholerae V51]
gi|254849050|ref|ZP_05238400.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745285|ref|ZP_05419234.1| hypothetical protein VCH_001631 [Vibrio cholera CIRS 101]
gi|262156009|ref|ZP_06029129.1| hypothetical protein VIG_001228 [Vibrio cholerae INDRE 91/1]
gi|262167916|ref|ZP_06035616.1| hypothetical protein VIJ_001090 [Vibrio cholerae RC27]
gi|297579473|ref|ZP_06941401.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|9656503|gb|AAF95112.1| hypothetical protein VC_1964 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547490|gb|EAX57596.1| hypothetical protein VC274080_2004 [Vibrio cholerae 2740-80]
gi|121629097|gb|EAX61542.1| hypothetical protein VCV52_1929 [Vibrio cholerae V52]
gi|124113586|gb|EAY32406.1| hypothetical protein A55_2172 [Vibrio cholerae 1587]
gi|124122610|gb|EAY41353.1| hypothetical protein A51_B2032 [Vibrio cholerae MZO-3]
gi|125620655|gb|EAZ49017.1| hypothetical protein VCV51_1323 [Vibrio cholerae V51]
gi|126520012|gb|EAZ77235.1| hypothetical protein A5E_2262 [Vibrio cholerae B33]
gi|146316072|gb|ABQ20611.1| hypothetical protein VC0395_A1550 [Vibrio cholerae O395]
gi|227013861|gb|ACP10071.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229337561|gb|EEO02578.1| hypothetical protein VCA_001559 [Vibrio cholerae bv. albensis
VL426]
gi|229343645|gb|EEO08620.1| hypothetical protein VCC_002983 [Vibrio cholerae RC9]
gi|229351784|gb|EEO16725.1| hypothetical protein VCE_003228 [Vibrio cholerae B33]
gi|229355450|gb|EEO20371.1| hypothetical protein VCF_003177 [Vibrio cholerae BX 330286]
gi|229370145|gb|ACQ60568.1| hypothetical protein VCD_002402 [Vibrio cholerae MJ-1236]
gi|254844755|gb|EET23169.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737115|gb|EET92511.1| hypothetical protein VCH_001631 [Vibrio cholera CIRS 101]
gi|262023643|gb|EEY42344.1| hypothetical protein VIJ_001090 [Vibrio cholerae RC27]
gi|262030187|gb|EEY48831.1| hypothetical protein VIG_001228 [Vibrio cholerae INDRE 91/1]
gi|297537067|gb|EFH75900.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 291
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 157
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 158 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 202 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 257
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 258 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|198450930|ref|XP_001358182.2| GA11194 [Drosophila pseudoobscura pseudoobscura]
gi|198131257|gb|EAL27319.2| GA11194 [Drosophila pseudoobscura pseudoobscura]
Length = 458
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-----NSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
T L++ M ++V + FD K FL + N EAIV G + ++ Y
Sbjct: 300 TELSETMTELVKIDPAFDQKQFLRDCETDIIPNVLEAIV----RGDLEILKDWCFESTYN 355
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
++ K + + S ++ I+D+ + + + + I Q I D ++
Sbjct: 356 VIATPITQAKKSGLYLDSKILDIEDIDLAMGKVMDQGPVLIITFQAQQIMCVRDPKGKVV 415
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
DPE +V +W R+ NP W L+
Sbjct: 416 EGDPEKVMRVAYVWVLCRDREELNPKAAWRLL 447
>gi|307109340|gb|EFN57578.1| hypothetical protein CHLNCDRAFT_51139 [Chlorella variabilis]
Length = 395
Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 23/153 (15%)
Query: 83 RLNKVMRDIVSVYT---------DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
R + + S+YT F+ F E+ Y I +G+ ++ +LV
Sbjct: 136 RWQRTLSQFKSMYTLAKCKKYVPGFNRNAFKQESLELYRDICRLLAQGERGSLRQLVTPA 195
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVG------IDDMKIINASI------EENT--VYITIR 179
V+ D L R+ S +D++ ++ + +E + +T+R
Sbjct: 196 VFSDMKRQLKQREDPAAGRACSGTSSGWEPTVDELTTVHGRLIMINPKDETSGFAQLTVR 255
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTF 212
I A+YDK L++ DPE V D W F
Sbjct: 256 IPSAQRFAAYDKAGKLVAGDPEQSIDVEDYWVF 288
>gi|254286893|ref|ZP_04961845.1| hypothetical protein A33_1875 [Vibrio cholerae AM-19226]
gi|150423043|gb|EDN14992.1| hypothetical protein A33_1875 [Vibrio cholerae AM-19226]
Length = 291
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 157
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 158 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 202 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYR 257
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 258 DAVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|195143739|ref|XP_002012855.1| GL23705 [Drosophila persimilis]
gi|194101798|gb|EDW23841.1| GL23705 [Drosophila persimilis]
Length = 458
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-----NSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
T L++ M ++V + FD K FL + N EAIV G + ++ Y
Sbjct: 300 TELSETMTELVKIDPAFDQKQFLRDCETDIIPNVLEAIV----RGDLEILKDWCFESTYN 355
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
++ K + + S ++ I+D+ + + + + I Q I D ++
Sbjct: 356 IIATPITQAKKSGLYLDSKILDIEDIDLAMGKVMDQGPVLIITFQAQQIMCVRDPKGKVV 415
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
DPE +V +W R+ NP W L+
Sbjct: 416 EGDPEKVMRVAYVWVLCRDREELNPKAAWRLL 447
>gi|260310504|gb|ACX36515.1| RE11601p [Drosophila melanogaster]
Length = 428
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + I++S G + ++ + +
Sbjct: 270 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 329
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ E + I Q I D+ + ++ DP
Sbjct: 330 PIKEAKKAGVYLDSKILDIENIELAMGKFMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 389
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+ NP W L+
Sbjct: 390 EKVMRVHYVWVLCRDRNELNPKAAWRLM 417
>gi|159041402|ref|YP_001540654.1| DNA primase, large subunit [Caldivirga maquilingensis IC-167]
gi|157920237|gb|ABW01664.1| DNA primase, large subunit [Caldivirga maquilingensis IC-167]
Length = 371
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH------AIEKLV--- 130
+G R++++M +F+P +N+A EA++ + K++ A+ + +
Sbjct: 28 VGIRVSELMS------REFEP--IVNDALRMLEALIKNGEHAKLNFSVRDVAVSRYIAYV 79
Query: 131 -----DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
D R+++ DS S SN VK S + +++ I E + +RI+G
Sbjct: 80 LTASMDKRIWRRIADSESKIFSN--MVKLSYLNKPNLECIKEVARE----LELRIIGVGE 133
Query: 186 SASYDKDNLLISSD---PEIFGKVIDIWTFVRNIPPSNPNWVL 225
+S L + P+ F + IW ++RN P ++PNWVL
Sbjct: 134 VSSLVAKRLNLQGQVLMPKPFMYAVSIWDYLRNSPRNDPNWVL 176
>gi|229515345|ref|ZP_04404805.1| hypothetical protein VCB_003002 [Vibrio cholerae TMA 21]
gi|229348050|gb|EEO13009.1| hypothetical protein VCB_003002 [Vibrio cholerae TMA 21]
Length = 291
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGIITLGKGKKK 68
IL+ I F +F +R L K G N+ +SG + F ++
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPF---------------EQ 142
Query: 69 DNLDSINELFPIGTRLNKVMR-DIVSVY-TDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
N+ + + +G + D+ Y FD F+N AR Y + ++ ++ I
Sbjct: 143 PNVHNFEQPQSVGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETI 202
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ V +++D L ++N + + + V D +I+ A + N ++++ G++
Sbjct: 203 REYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRD 258
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + D+W R++ N W+++ +
Sbjct: 259 AVEG-----------IEENIEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|47225693|emb|CAG08036.1| unnamed protein product [Tetraodon nigroviridis]
Length = 397
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 5/193 (2%)
Query: 37 NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT 96
N F+ FF K + + D +I + D I LF T +++V+ +I+ V
Sbjct: 196 NNAVFNRFFEMKMKYDESD-NALIRASRAVTDKMSDLIGGLFS-KTEMSEVLTEILKVDP 253
Query: 97 DFDPKDFLNEA-RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
FD FL R+ I+++ +G++ ++ Y + K+ S
Sbjct: 254 SFDKDSFLKLCERDIIPNILEAMIQGELDVLKDWCYEATYSQLAHPIQQAKATGLKFHSK 313
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRN 215
++ ID++ + + + + I Q + + ++ DP+ +++ +W R+
Sbjct: 314 ILDIDNIDLAMGKMMDQGPVLIITFQAQLVMVIRNPKGEVVEGDPDKVIRMMYVWALCRD 373
Query: 216 IPPSNP--NWVLI 226
NP W L+
Sbjct: 374 QEELNPYAAWRLL 386
>gi|330446574|ref|ZP_08310226.1| tim44-like domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490765|dbj|GAA04723.1| tim44-like domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 290
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 92/219 (42%), Gaps = 30/219 (13%)
Query: 10 DFLIL-LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
D LI+ + AF+ F +F +R G G+ + ++G + ++ R +
Sbjct: 96 DILIIGVIAFVLFKLFKAMRANKGTPMGHRESYAGNSPQQPQQPQQQYRQAAGAQSQPQN 155
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+S + P N F+ FL+ +R+ Y I ++ ++ I +
Sbjct: 156 GGFESTDSDVPFNLPPN------------FNMNAFLSGSRDHYRIIQGAWNHNELEKIRE 203
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ D ++ + S E++ + V D +++ A + NT ++I+ G++
Sbjct: 204 YVSPALFADL-EAERAKLSGEQHTEVMYV---DAELVRADYDANTAQLSIKFSGRY---- 255
Query: 189 YDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
KD++ + D + D+W R++ N W+++
Sbjct: 256 --KDSVEGVEED------ITDVWHLERDLKTPNAPWLIV 286
>gi|73987180|ref|XP_542123.2| PREDICTED: similar to Import inner membrane translocase subunit
TIM44, mitochondrial precursor [Canis familiaris]
Length = 454
Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D +I + D + LF T +++V+ +I+ V FD
Sbjct: 257 FNRFFEMKMKYDESD-NALIRASRALTDKVTDLLGGLFS-KTEMSEVLTEILRVDPAFDK 314
Query: 101 KDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
+ FL + N ++++ G++ ++ Y + K+ S ++ I
Sbjct: 315 ERFLQQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRILDI 374
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 375 DNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEGDPDKVLRMLYVWALCRDQDEL 434
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 435 NPYAAWRLL 443
>gi|194746677|ref|XP_001955803.1| GF18940 [Drosophila ananassae]
gi|190628840|gb|EDV44364.1| GF18940 [Drosophila ananassae]
Length = 461
Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA-IEKLVDSRVYQDFN- 139
T L++ M ++V + FD K+FL++ I+ + E V +E L D FN
Sbjct: 303 TELSETMTELVKIDPSFDQKEFLHDCETD---IIPNILEAIVRGDLEILKDWCFESTFNI 359
Query: 140 --DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
++ K + S ++ I+++++ + E + I Q I D+ ++
Sbjct: 360 IATPITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVE 419
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
DPE +V +W R+ NP W L+
Sbjct: 420 GDPEKVMRVHYVWVLCRDRNELNPKAAWRLM 450
>gi|311248590|ref|XP_003123248.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Sus scrofa]
Length = 454
Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD + FL + N ++++ G++ ++ Y
Sbjct: 296 TEMSEVLTEILRVDPAFDKERFLQQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 355
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 356 PIQQAKALGLQFHSRILDIDNIDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEGDP 415
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 416 DKVLRMLYVWALCRDQDELNPYAAWRLL 443
>gi|119776251|ref|YP_928991.1| hypothetical protein Sama_3119 [Shewanella amazonensis SB2B]
gi|119768751|gb|ABM01322.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 295
Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
FD FL AR Y+ + ++ EG ++ I++ V ++ + LS ++ + + + V
Sbjct: 178 FDLAAFLEGARGHYKTLQQAWNEGDLNKIQEYVSIELF----NELSQQRRELEGQQHTEV 233
Query: 158 GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP 217
D +++ A+ ++++ G++ A+ + D + ++W RN+
Sbjct: 234 MFLDAELVRATYNNELAEVSVKFSGRYRDAAEG-----VEED------IKEVWHLERNLL 282
Query: 218 PSNPNWVLISTK 229
+N W+++ +
Sbjct: 283 QANSPWLIVGIQ 294
>gi|189236504|ref|XP_975336.2| PREDICTED: similar to mitochondrial import inner membrane
translocase subunit tim44 [Tribolium castaneum]
Length = 424
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + FD K FL + I+++ G + ++ + F
Sbjct: 266 TELSETLTEICKIDPTFDTKKFLKQCETDIIPNILEAMTRGDLEVLKDWCHEGPFNLFAI 325
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ + S ++ +D++ ++ + E + I Q + D + ++ DP
Sbjct: 326 PIKEAYKKGYKIDSKVLDVDNVDLVMGKVMEQGPVLIISFTSQQMMCVRDPNGNVVEGDP 385
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+I +P W L+
Sbjct: 386 EKVMRVAYVWVLCRDISEPDPRAAWRLL 413
>gi|156973734|ref|YP_001444641.1| hypothetical protein VIBHAR_01439 [Vibrio harveyi ATCC BAA-1116]
gi|156525328|gb|ABU70414.1| hypothetical protein VIBHAR_01439 [Vibrio harveyi ATCC BAA-1116]
Length = 290
Score = 38.1 bits (87), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 47/229 (20%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN-----EKPFSGFFSGKYV------FSKRDERGIIT 61
IL+ I F +F +RG+LG K G+ ++P G + K+ F ++
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQPNMQNFEQQPNTNAGG 155
Query: 62 LGK-GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
G G + D I +P G FD F+N +R Y + ++
Sbjct: 156 FGGFGSQTD----IPHNYPPG----------------FDQAAFINGSREHYRILQGAWNH 195
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
++H IE+ V +++D L ++ + + V D +I+ A + + ++++
Sbjct: 196 NQLHTIEEYVSPSLFED----LKAERAKLDGEQHTDVMYVDAEIVRADYDASKAQLSLQF 251
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G++ A + + W R++ N W+++ +
Sbjct: 252 SGRYRDAEEGIEEDIEDI-----------WHLERDLTVPNAPWLIVGIQ 289
>gi|270005995|gb|EFA02443.1| hypothetical protein TcasGA2_TC008130 [Tribolium castaneum]
Length = 421
Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + FD K FL + I+++ G + ++ + F
Sbjct: 263 TELSETLTEICKIDPTFDTKKFLKQCETDIIPNILEAMTRGDLEVLKDWCHEGPFNLFAI 322
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ + S ++ +D++ ++ + E + I Q + D + ++ DP
Sbjct: 323 PIKEAYKKGYKIDSKVLDVDNVDLVMGKVMEQGPVLIISFTSQQMMCVRDPNGNVVEGDP 382
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E +V +W R+I +P W L+
Sbjct: 383 EKVMRVAYVWVLCRDISEPDPRAAWRLL 410
>gi|118103065|ref|XP_418174.2| PREDICTED: similar to Translocase of inner mitochondrial membrane
44 homolog (yeast) [Gallus gallus]
Length = 451
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D I + D I LF T +++V+ +I+ V FD
Sbjct: 254 FNRFFEMKMKYDESD-NAFIRASRAVTDKVTDLIGGLFS-KTEMSEVLTEILKVDPSFDK 311
Query: 101 KDFLNEA-RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + R+ ++++ G++ ++ Y + K+ S ++ I
Sbjct: 312 DRFLKQCERDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKAMGLQFHSRILDI 371
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + ++ ++ DP+ +++ +W R+
Sbjct: 372 DNIDLAMGKMMEQGPVLIITFQAQIVMVIKNQKGEVVEGDPDKVLRMLYVWALCRDQDEL 431
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 432 NPYAAWRLL 440
>gi|157131210|ref|XP_001655824.1| mitochondrial ribosomal protein, L45, putative [Aedes aegypti]
gi|108871608|gb|EAT35833.1| mitochondrial ribosomal protein, L45, putative [Aedes aegypti]
Length = 334
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 25 LQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK----KKDNLDSINELFPI 80
++ RG+L + E+PF +G VF E + G GK K+ EL
Sbjct: 81 MKERGILPPRPWMERPFYISCTGG-VF----EPYVPPEGDGKMSAVSKEGAKQKFELLEK 135
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T+ +R I S DF+P +F +A+ Y + E + + +++ R Y +
Sbjct: 136 KTKSMMAVRKIRSFDDDFEPPEFAAQAQEIYIQAHNLLMEKNKYKLREIITERAYPEMMH 195
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINAS----IEENTVY--ITIRIVGQFISASYDK 191
+++ + K +KS ++ ++++A I ++ ++ +T+R Q I A YD+
Sbjct: 196 NVTDKTIRWKFLKS----LEPPRVVHARCTDVISKDNIFGQVTVRFHTQQILAIYDR 248
>gi|332852444|ref|XP_003316109.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 isoform 1 [Pan troglodytes]
Length = 452
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 353
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 354 PIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDP 413
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 414 DKVLRMLYVWALCRDQDELNPYVAWRLL 441
>gi|2809420|gb|AAB97740.1| translocase of inner mitochondrial membrane Tim44 precursor [Homo
sapiens]
Length = 452
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 353
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 354 PIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDP 413
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 414 DKVLRMLYVWALCRDQDELNPYAAWRLL 441
>gi|33636719|ref|NP_006342.2| mitochondrial import inner membrane translocase subunit TIM44
precursor [Homo sapiens]
gi|25014073|sp|O43615|TIM44_HUMAN RecName: Full=Mitochondrial import inner membrane translocase
subunit TIM44; Flags: Precursor
gi|21708003|gb|AAH33628.1| Translocase of inner mitochondrial membrane 44 homolog (yeast)
[Homo sapiens]
gi|119589360|gb|EAW68954.1| translocase of inner mitochondrial membrane 44 homolog (yeast),
isoform CRA_a [Homo sapiens]
gi|119589361|gb|EAW68955.1| translocase of inner mitochondrial membrane 44 homolog (yeast),
isoform CRA_a [Homo sapiens]
gi|123980796|gb|ABM82227.1| translocase of inner mitochondrial membrane 44 homolog (yeast)
[synthetic construct]
gi|123995621|gb|ABM85412.1| translocase of inner mitochondrial membrane 44 homolog (yeast)
[synthetic construct]
gi|158260291|dbj|BAF82323.1| unnamed protein product [Homo sapiens]
gi|307685105|dbj|BAJ20483.1| translocase of inner mitochondrial membrane 44 homolog [synthetic
construct]
Length = 452
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 353
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 354 PIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDP 413
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 414 DKVLRMLYVWALCRDQDELNPYAAWRLL 441
>gi|301773124|ref|XP_002921985.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like, partial [Ailuropoda melanoleuca]
Length = 452
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D +I + D + LF T +++V+ +I+ V FD
Sbjct: 255 FNRFFEMKMKYDESD-NALIRASRALTDKVTDLLGGLFS-KTEMSEVLTEILRVDPAFDK 312
Query: 101 KDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
+ FL + N ++++ G++ ++ Y + ++ S ++ I
Sbjct: 313 ERFLQQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQARALGLQFHSRILDI 372
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 373 DNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEGDPDKVLRMLYVWALCRDQDEL 432
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 433 NPYAAWRLL 441
>gi|326934236|ref|XP_003213198.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Meleagris gallopavo]
Length = 435
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D I + D I LF T +++V+ +I+ V FD
Sbjct: 238 FNRFFEMKMKYDESD-NAFIRASRAVTDKVTDLIGGLFS-KTEMSEVLTEILKVDPSFDK 295
Query: 101 KDFLNEA-RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + R+ ++++ G++ ++ Y + K+ S ++ I
Sbjct: 296 DRFLKQCERDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKAMGLQFHSRILDI 355
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + ++ ++ DP+ +++ +W R+
Sbjct: 356 DNIDLAMGKMMEQGPVLIITFQAQVVMVIKNQKGEVVEGDPDKVLRMLYVWALCRDQDEL 415
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 416 NPYAAWRLL 424
>gi|4103602|gb|AAD01797.1| putative mitochondrial inner membrane protein import receptor [Homo
sapiens]
Length = 415
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 257 TEMSEVLTEILRVDPPFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 316
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 317 PIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDP 376
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 377 DKVLRMLYVWALCRDQDELNPYAAWRLL 404
>gi|332852446|ref|XP_512338.3| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 isoform 2 [Pan troglodytes]
Length = 415
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 257 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 316
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 317 PIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDP 376
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 377 DKVLRMLYVWALCRDQDELNPYVAWRLL 404
>gi|260773108|ref|ZP_05882024.1| hypothetical protein VIB_001575 [Vibrio metschnikovii CIP 69.14]
gi|260612247|gb|EEX37450.1| hypothetical protein VIB_001575 [Vibrio metschnikovii CIP 69.14]
Length = 289
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/223 (17%), Positives = 89/223 (39%), Gaps = 39/223 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFS---GKYVFSKRDE---RGIITLGKGK 66
IL+F I F +F R L K G+ P ++ + F + E + + G G
Sbjct: 99 ILIFGLIGFALFKLARHFLAGKQGSLNPRQPAYNTNVHRQSFEQAPEQEFKPAASSGFGS 158
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
N + +P G FD F+N +R Y + ++ ++ I
Sbjct: 159 TMHN--DVPHNYPPG----------------FDKIAFINGSREHYRILQGAWNHNQLETI 200
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E+ V ++ D + R+ ++ ++ ++ + D +I+ A ++ ++++ G+
Sbjct: 201 EEYVSQSLFSDLK---AEREKLDQQPQTEVMYV-DAEIVRADYDDRKAQLSLQFTGRCRD 256
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + +++DIW R++ N W+++ +
Sbjct: 257 LGDETEE-----------EILDIWHLERDLTQPNAPWLIVGIQ 288
>gi|62897685|dbj|BAD96782.1| translocase of inner mitochondrial membrane 44 homolog [Homo
sapiens]
Length = 452
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 353
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 354 PIQQAKALGLQFHSRILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGEVVEGDP 413
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 414 DKVLRMLYVWALCRDQDELNPYAAWRLL 441
>gi|148224361|ref|NP_001087692.1| translocase of inner mitochondrial membrane 44 [Xenopus laevis]
gi|51703695|gb|AAH81090.1| MGC82677 protein [Xenopus laevis]
Length = 451
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA-RNSYEAIVDSFFEGKVHAIEKLV 130
D I LF T +++V+ +I+ V +FD FL R+ I+++ G + ++
Sbjct: 284 DLIGGLFS-KTEMSEVLTEILKVDPNFDKDKFLKLCERDIIPNILEAMIRGDLDVLKDWC 342
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
Y + KS S ++ ID++ + + E + I Q + A +
Sbjct: 343 YEATYSQLAHPIQQAKSMGLQFNSRILDIDNIDLAMGKMMEQGPVLIITFQAQLVMAITN 402
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ ++ D + +++ +W R+ NP W L+
Sbjct: 403 QRGDIVEGDQDKVLRMLYVWALCRDQDELNPYAAWRLL 440
>gi|281349988|gb|EFB25572.1| hypothetical protein PANDA_010903 [Ailuropoda melanoleuca]
Length = 405
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D +I + D + LF T +++V+ +I+ V FD
Sbjct: 208 FNRFFEMKMKYDESD-NALIRASRALTDKVTDLLGGLFS-KTEMSEVLTEILRVDPAFDK 265
Query: 101 KDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
+ FL + N ++++ G++ ++ Y + ++ S ++ I
Sbjct: 266 ERFLQQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQARALGLQFHSRILDI 325
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 326 DNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEGDPDKVLRMLYVWALCRDQDEL 385
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 386 NPYAAWRLL 394
>gi|291411565|ref|XP_002722049.1| PREDICTED: translocase of inner mitochondrial membrane 44
[Oryctolagus cuniculus]
Length = 452
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 76/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D +I + D + LF T +++V+ +I+ V FD
Sbjct: 255 FNRFFEMKMKYDESD-NALIRASRALTDKVTDLLGGLFS-KTEMSEVLTEILRVDPAFDK 312
Query: 101 KDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + N I+++ G++ ++ Y + K+ S ++ +
Sbjct: 313 DRFLQQCENDIIPNILEAMISGELDILKDWCYEATYSQLAHPIQQAKALGFQFHSRILDV 372
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 373 DNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEGDPDKVLRMLYVWALCRDQDEL 432
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 433 NPYAAWRLL 441
>gi|300798484|ref|NP_001179583.1| mitochondrial import inner membrane translocase subunit TIM44 [Bos
taurus]
gi|297476712|ref|XP_002688909.1| PREDICTED: translocase of inner mitochondrial membrane 44 homolog
(yeast) [Bos taurus]
gi|296485872|gb|DAA27987.1| translocase of inner mitochondrial membrane 44 homolog [Bos taurus]
Length = 454
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 296 TEMSEVLTEILRVDPAFDKDRFLQQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 355
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID + + + E + I Q + + ++ DP
Sbjct: 356 PIQQAKALGLQFHSRILDIDHIDLAMGKMMEQGPVLIITFQAQMVMVIKNPKGEVVEGDP 415
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 416 DKVLRMLYVWALCRDQDELNPYAAWRLL 443
>gi|156048528|ref|XP_001590231.1| predicted protein [Sclerotinia sclerotiorum 1980]
gi|154693392|gb|EDN93130.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 135
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF---NDSLSTRKSNEKNVK 153
D+ P+D N ++ + FEGK+ + ++ D R+YQ+F D + + E+N K
Sbjct: 10 DYTPQDIKNPWPMNFHLALGGDFEGKIEVLVEVRDERIYQNFYKGKDFELMKNTPERNAK 69
Query: 154 SSLVG 158
++G
Sbjct: 70 DPVIG 74
>gi|296232753|ref|XP_002761726.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 [Callithrix jacchus]
Length = 452
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D +I + D + LF T +++ + +I+ V FD
Sbjct: 255 FNRFFEMKVKYDESDN-ALIRASRALTDKVTDLLGGLFS-KTEMSEALTEILRVDPAFDK 312
Query: 101 KDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + N ++++ G++ ++ Y + K+ S ++ I
Sbjct: 313 DRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRILDI 372
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 373 DNVDLAMGKMMEQGPVLIITFQAQLVMLVRNPKGEVVEGDPDKVLRMLYVWALCRDQDEL 432
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 433 NPYAAWRLL 441
>gi|126323825|ref|XP_001376780.1| PREDICTED: similar to Translocase of inner mitochondrial membrane
44 homolog (yeast) [Monodelphis domestica]
Length = 443
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
F+ FF K + + D +I + + D + LF T +++V+ +I+ V FD
Sbjct: 246 FNRFFEMKMKYDESD-NTLIRVSRAVTDKITDLVGGLFS-KTEMSEVLTEILKVDPTFDK 303
Query: 101 KDFLNEA-RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
FL + R+ ++++ G++ ++ Y + KS S ++ I
Sbjct: 304 DRFLQQCERDIIPNVLEAMITGELDILKDWCYEATYSQLAHPIHQAKSMGLQFHSRILDI 363
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
++ + + E + I Q + + ++ DP+ +++ +W R+
Sbjct: 364 SNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGDVVEGDPDKVLRMLYVWALCRDQTEL 423
Query: 220 NP--NWVLI 226
NP W L+
Sbjct: 424 NPYAAWRLL 432
>gi|255641370|gb|ACU20962.1| unknown [Glycine max]
Length = 181
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 19/145 (13%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNE------ 149
T + F NEA N Y+ I +G + K V ++ + + R++
Sbjct: 30 TGYSKNQFYNEAANMYKEINTLIAKGDKRTLRKAVTENMFSALKNEIKQRETAWSRVYWE 89
Query: 150 --------KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+ +++ L+G+D + + + +T+ I+ + +YD +++ D
Sbjct: 90 MVEPVVKIRTLRARLIGVD-----RKDLNKTFIQLTLEILAKQKFEAYDSKGSVVAGDKS 144
Query: 202 IFGKVIDIWTFVRNIPPSNPNWVLI 226
V DIW F +++ + W L
Sbjct: 145 KEVLVRDIWVFEKSMFHAGATWRLC 169
>gi|125976736|ref|XP_001352401.1| GA10857 [Drosophila pseudoobscura pseudoobscura]
gi|54641147|gb|EAL29897.1| GA10857 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
SR +Q D S + E+N++ L G+D+++ I AS+E++TV T
Sbjct: 567 SRTHQVSRDLRSAADNAEQNLRQLLTGVDNLRQIAASLEQSTVQSTA 613
>gi|89073249|ref|ZP_01159779.1| hypothetical protein SKA34_19790 [Photobacterium sp. SKA34]
gi|89050959|gb|EAR56423.1| hypothetical protein SKA34_19790 [Photobacterium sp. SKA34]
Length = 291
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
+F+ FL+ +R+ Y I ++ ++ I++ V S ++ D + + S E++ +
Sbjct: 173 NFNMNSFLSGSRDHYRIIQGAWNHNELAKIKEYVSSALFADLQ-AERAKLSGEQHTEVMY 231
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V D +++ A + N+ ++I+ G++ KD S I + D+W R++
Sbjct: 232 V---DAELVRADYDANSAQLSIQFSGRY------KD-----SQEGIEEDINDVWHLERDL 277
Query: 217 PPSNPNWVLI 226
N W+++
Sbjct: 278 KTPNAPWLIV 287
>gi|297703381|ref|XP_002828619.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Pongo abelii]
Length = 451
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/148 (16%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 293 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAH 352
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ +P
Sbjct: 353 PIQQAKALGLQFHSRILDIDNIDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGNP 412
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 413 DEVLRMLYVWALCRDQDELNPYAAWRLL 440
>gi|170068221|ref|XP_001868783.1| mitochondrial import inner membrane translocase subunit tim44
[Culex quinquefasciatus]
gi|167864292|gb|EDS27675.1| mitochondrial import inner membrane translocase subunit tim44
[Culex quinquefasciatus]
Length = 431
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + FD K FL + N I+++ G + ++ Y
Sbjct: 273 TELSETLTEICKIDPSFDQKQFLRDCENDIIPNILEAMIRGDLEILKDWCFESTYNIIAT 332
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ + + S ++ I+++ + + E + + Q I D N ++ DP
Sbjct: 333 PIAQAQKAGFFLDSKILDIENVDLAMGKVMEQGPVLIVTFQTQQIMCVRDSKNAVVEGDP 392
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E + +W R+ NP W L+
Sbjct: 393 EKVMRCNYVWVLCRDPNDLNPRSAWRLM 420
>gi|209694565|ref|YP_002262493.1| putative transport protein [Aliivibrio salmonicida LFI1238]
gi|208008516|emb|CAQ78689.1| putative transport protein [Aliivibrio salmonicida LFI1238]
Length = 316
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/133 (18%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
FD + F+N +R Y + ++ ++ I++ V +Y D L ++N + + + V
Sbjct: 199 FDLQGFINGSREHYRILQGAWNHNQLETIQEYVSISLYND----LVQERANLEGEQHTDV 254
Query: 158 GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNI 216
D +++ A ++ ++++ G++ +D++ + D + D+W R++
Sbjct: 255 MFVDAEVVRAEHNASSAQLSLQFSGRY------RDSVEGLQED------ITDVWHLERDL 302
Query: 217 PPSNPNWVLISTK 229
N W++I +
Sbjct: 303 TQPNAPWLIIGIQ 315
>gi|298498003|ref|ZP_07007810.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|297542336|gb|EFH78386.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 272
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSG--KYVFSKRDERGI---ITLGKG 65
IL+ I F +F +R L K G N+ +SG + F + + ++G G
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGG 157
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ +P G FD F+N AR Y + ++ ++
Sbjct: 158 FGSAAQSDVPHNYPAG----------------FDRVAFVNGAREHYRILQGAWNHNQLET 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + V +++D L ++N + + + V D +I+ A + N ++++ G+++
Sbjct: 202 IREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYV 257
Query: 186 SAS 188
+ S
Sbjct: 258 TLS 260
>gi|114328920|ref|YP_746077.1| transporter [Granulibacter bethesdensis CGDNIH1]
gi|114317094|gb|ABI63154.1| transporter [Granulibacter bethesdensis CGDNIH1]
Length = 326
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
FN+ L+ S + + V + + A E Y T+ ++ I A+YD ++
Sbjct: 235 FNEQLTALASRGLHNTVTNVTLQKGDLSEAWREGTLEYATVAMLFSMIDATYDSSGRVVE 294
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
D + WTFVR+ P P W+L
Sbjct: 295 GDASQLQTATEFWTFVRS--PGGP-WIL 319
>gi|297275995|ref|XP_001098363.2| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 [Macaca mulatta]
Length = 461
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 303 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAY 362
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 363 PIQQAKALGLQFHSRILDIDNIDLAMGKMMEPGPVLIITFQAQLVVVVRNPKGEVVEGDP 422
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 423 DKVLRMLYVWALCRDQDELNPYAAWRLL 450
>gi|254425847|ref|ZP_05039564.1| hypothetical protein S7335_414 [Synechococcus sp. PCC 7335]
gi|196188270|gb|EDX83235.1| hypothetical protein S7335_414 [Synechococcus sp. PCC 7335]
Length = 515
Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 55 DERGIITLGKGKKK-DNLDSINELFPIGT-RLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
D++ IIT +GK NLD + + GT + V D + +D P L A S +
Sbjct: 168 DQQSIITYSQGKSYLYNLDGVEQATFAGTIQWGTVDGDYLIAVSDDRPGFLLYSAEGSLQ 227
Query: 113 AIVDSFFEGKVHAIEKLV-----DSRVYQDFNDSL 142
A + FF G V + +KLV +SR+Y +F+ SL
Sbjct: 228 ATFEGFFRGFVPSEQKLVVTDNDESRLY-NFDGSL 261
>gi|170042852|ref|XP_001849125.1| 39S ribosomal protein L45 [Culex quinquefasciatus]
gi|167866282|gb|EDS29665.1| 39S ribosomal protein L45 [Culex quinquefasciatus]
Length = 336
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 25 LQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK----KKDNLDSINELFPI 80
++ RG+L + E+PF +G VF E I G GK K+ E
Sbjct: 80 MKERGLLPPRPWLERPFHISCTGG-VF----EPYIPPEGDGKMSAVSKEGAKQKFEQLEK 134
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T+ +R I S DF+P +F A++ Y ++ + + ++V R Y +
Sbjct: 135 KTKSMMAIRKIRSYDDDFEPPEFAGYAQDIYIDTHNTLAAKNKYKLREIVTERAYPELIH 194
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINAS----IEENTVY--ITIRIVGQFISASYDKDNL 194
++S + + K +KS ++ ++++A I ++ ++ +T+R Q I A YD+
Sbjct: 195 NVSDKTIHWKFLKS----LEPPRVVHARCTDVISKDNIFAQVTVRFHSQQILAIYDRFGR 250
Query: 195 LISSDPEIFGKVIDIWTFVRNI 216
L+ I ++ F +++
Sbjct: 251 LMHGSETIAKDCLEYVVFEKHV 272
>gi|119115002|ref|XP_310830.3| AGAP000291-PA [Anopheles gambiae str. PEST]
gi|116130625|gb|EAA06726.3| AGAP000291-PA [Anopheles gambiae str. PEST]
Length = 401
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNS-YEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + FD K FL + N ++++ G++ + Y
Sbjct: 243 TELSETLTEICKIDPSFDQKQFLRDCENDIIPNVLEAIVRGELEVLRDWCFESTYNIIAT 302
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ + + S ++ I+++ + + E + + Q I D +I DP
Sbjct: 303 PIAQAQKAGCRLDSKILDIENVDLAMGKVMEQGPVLIVTFQTQQIMCVRDGKGAVIEGDP 362
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E + +W R+ +P W L+
Sbjct: 363 EKVMRCHHVWVLCRDPNELDPKAAWRLM 390
>gi|290993354|ref|XP_002679298.1| predicted protein [Naegleria gruberi]
gi|284092914|gb|EFC46554.1| predicted protein [Naegleria gruberi]
Length = 240
Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV---HAIEKLVDSRVYQDFNDSL-- 142
+ D + DF P D+ +E ++ Y IV+ F G + KL +F ++
Sbjct: 5 VEDYMGELYDFYP-DYWDEGQHGYWGIVNGFQSGTIFFNDNTTKLDTLNPSSNFMCAVRY 63
Query: 143 --STRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
S + SNE K L + I +A+ +Y+T+R +G+ D D++ + +P
Sbjct: 64 IVSNKPSNEIAAKDCLYSSKQLDIFSATASSFGIYVTVRNLGR------DYDSVRLGLNP 117
Query: 201 EIFGKVIDI 209
E G + +
Sbjct: 118 ERLGSGVHV 126
>gi|91206049|ref|YP_538404.1| hypothetical protein RBE_1234 [Rickettsia bellii RML369-C]
gi|157826585|ref|YP_001495649.1| hypothetical protein A1I_01080 [Rickettsia bellii OSU 85-389]
gi|91069593|gb|ABE05315.1| unknown [Rickettsia bellii RML369-C]
gi|157801889|gb|ABV78612.1| hypothetical protein A1I_01080 [Rickettsia bellii OSU 85-389]
Length = 211
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 43/227 (18%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---------SKRDERGIITLG 63
+L+FA I FF+ +L LG + ++ + G+ V S +E+ + T
Sbjct: 8 LLIFAGIAFFIINKLITTLGATSDDDPAKQKSYFGEPVIKDVTHSSNKSYEEEKDLPTAQ 67
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K NL + + + V + + + F P F+N A+ +++ I+++ ++ +
Sbjct: 68 DIKTFKNLIVEQNITAVVDGMETVHKRLNA----FQPIKFINNAKIAFQMIIEAAYKNQT 123
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE-----NTVYITI 178
+ +LVD R ++F + + S D +NA E N ++I +
Sbjct: 124 EELAELVDKRFLEEF-----------EKISDSYGNFFDSTALNAKYSEIYTFGNNIFIKL 172
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
G+ + DK ++ + WTF RN +W L
Sbjct: 173 LFQGKNV---VDK-----------IEELKEEWTFTRNANTKEVDWFL 205
>gi|221102145|ref|XP_002170372.1| PREDICTED: similar to mitochondrial ribosomal protein L45, partial
[Hydra magnipapillata]
Length = 98
Score = 35.4 bits (80), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 148 NEKNVKSSLVGIDDMKIINAS---IEENTVY--ITIRIVGQFISASYDKDNLLISSDPEI 202
+ NV + + ++ ++INA+ + EN +Y +T+R+ + I D+ N +++ DP+
Sbjct: 9 QQTNVLAIVKEVEKPRVINAALSAVSENDLYAQVTVRLHTEQILTIRDRFNRIVTGDPKT 68
Query: 203 FGKVIDIWTFVRNIPPSNPNW 223
VID F R++P W
Sbjct: 69 PRSVIDYVVFERHLPDPYGKW 89
>gi|289741253|gb|ADD19374.1| mitochondrial import inner membrane translocase subunit TIM44
[Glossina morsitans morsitans]
Length = 421
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEA-------------RNSYEAIVDSFFEGKVHAIEK 128
T L++ M ++ + +FD K FL + R E + D FE +
Sbjct: 262 TELSETMTELCKIDPNFDQKQFLRDCEVDIIPNILEATVRGDLEILKDWCFESTYN---- 317
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ + + Q L + S ++ I+++ ++ + E + I Q I
Sbjct: 318 LIATPINQAIKSGLC--------LDSKILDIENIDLVMGKVMEQGPVLIITFQAQQIMCL 369
Query: 189 YDK-DNLLISSDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
D+ N ++ DPE +V +W R+ NP W L+
Sbjct: 370 KDRATNKIVEGDPEKVMRVNHVWVLCRDPNELNPKAAWRLL 410
>gi|160877221|ref|YP_001556537.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS195]
gi|160862743|gb|ABX51277.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS195]
gi|315269425|gb|ADT96278.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS678]
Length = 287
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-NEKPF---SGFFSGKYVFSKRDERGIITLGKGKKK 68
IL+ + F +F +R V+ K G ++P +G + + ++ G T
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQRQQTEQTGFAT------- 146
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
N +S + F G + V D+ + FD FL AR+ Y+ + ++ E + I++
Sbjct: 147 -NTNSGSNGF--GQATSAVPFDLPA---GFDLPSFLEGARSHYKTLQLAWNENDLSKIQE 200
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V +Y + LS ++ + + V D +++ A+ N ++++ G++
Sbjct: 201 YVSIELYNE----LSNQRRELVGDQHTEVMFLDAELVRATHNANLAEVSVKFSGRY---- 252
Query: 189 YDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+D + + D + +IW RN+ +N W+++ +
Sbjct: 253 --RDTVEGVEED------IKEIWHLERNVTQANSPWLIVGVE 286
>gi|195388820|ref|XP_002053076.1| GJ23681 [Drosophila virilis]
gi|194151162|gb|EDW66596.1| GJ23681 [Drosophila virilis]
Length = 428
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-----NSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
T L++ M ++V + +FD K+FL + N EAIV G + ++ Y
Sbjct: 270 TELSETMTELVKIDPNFDQKEFLYDCEKDIIPNVLEAIV----RGDLEILKDWCFESTYN 325
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
+ K + + S ++ I+++++ + E + I Q I D+ ++
Sbjct: 326 IIATPIMQAKKSGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVV 385
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPN--WVLI 226
+P+ +V +W R+ NP W L+
Sbjct: 386 EGNPDKVMRVHYVWVLCRDRNELNPKAAWRLM 417
>gi|17508985|ref|NP_491780.1| hypothetical protein T09B4.9 [Caenorhabditis elegans]
gi|6016367|sp|O02161|TIM44_CAEEL RecName: Full=Probable mitochondrial import inner membrane
translocase subunit tim-44; Flags: Precursor
gi|2039379|gb|AAB53011.1| Hypothetical protein T09B4.9 [Caenorhabditis elegans]
Length = 425
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLV 130
+ I +F +++V+ +I + +FD +++L I+++F + ++
Sbjct: 256 EKIGSVFSGQNEVSEVLTEIHKIDANFDKQEWLRFCETKIIPNILEAFIRFDLEVLQSWC 315
Query: 131 DSRVYQDFNDSLSTRKSNEKNVK-SSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
R Y + + + + K S ++ I+ +++ + E + I I+ +
Sbjct: 316 HERAYTQLSTVVKEYQKMHFSTKDSRIIDINKVEMATGKMMEQGPVLIISFQVYMINVTK 375
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLGE 232
+ D ++ DP+ ++ IW R++ NP W L+ + E
Sbjct: 376 NADGKVVEGDPDNPKRINHIWVLCRDVEEYNPALAWKLLEVHMQE 420
>gi|332264171|ref|XP_003281120.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 [Nomascus leucogenys]
Length = 455
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 72 DSINELFPIG----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE------G 121
D + +L G T +++V+ +I+ V FD FL + N I+ + E G
Sbjct: 281 DKVTDLLGEGSVSKTEMSEVLTEILRVDPAFDKDRFLKQCEND---IIPNVLEVGAAPPG 337
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ + + Y + K+ S ++ ID++ + + E + I
Sbjct: 338 PLPGSRSWLHQQTYSQLAHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQ 397
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLI 226
Q + + ++ DP+ +++ +W R+ NP W L+
Sbjct: 398 AQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRLL 444
>gi|170584097|ref|XP_001896855.1| Tim44-like domain containing protein [Brugia malayi]
gi|158595793|gb|EDP34297.1| Tim44-like domain containing protein [Brugia malayi]
Length = 773
Score = 34.7 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
+ +++V+ +I V +F+ ++L ++++F G + ++ R Y +
Sbjct: 614 SEISEVLSEIQKVDPNFEKNEWLRFCEKEIIPNVLEAFIRGDLKILKDWCYERAYNILSA 673
Query: 141 SLST-RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
+++ +K N S ++ I+ ++++ + E+ I I ++ + + ++ D
Sbjct: 674 TVNEYKKINFNTTDSRIIDINRVEMVTGKMMEHGPVIIITFQAYMVNIVRNMEGKVVEGD 733
Query: 200 PEIFGKVIDIWTFVRNIPPSNP 221
P +V +W R++ NP
Sbjct: 734 PNSPVRVHHVWVMCRDMEEYNP 755
>gi|157118792|ref|XP_001653263.1| mitochondrial import inner membrane translocase subunit tim44
[Aedes aegypti]
gi|108875602|gb|EAT39827.1| mitochondrial import inner membrane translocase subunit tim44
[Aedes aegypti]
Length = 433
Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + +FD K FL + N I+++ G + ++ Y
Sbjct: 275 TELSETLTEICKIDPNFDQKQFLRDCENDIIPNILEAMIRGDLEVLKDWCFESTYNIIAT 334
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+S + + S ++ I+++ + + E + I Q I D +I DP
Sbjct: 335 PISQAQKLGYYLDSKVLDIENVDLAMGKVMEQGPVLIITFQTQQIMCVRDSKGNVIEGDP 394
Query: 201 EIFGKVIDIWTFVRNIPPSNPN--WVLI 226
E + +W R+ NP W L+
Sbjct: 395 EKVMRCNYVWVLCRDPNDLNPKSAWRLM 422
>gi|90075058|dbj|BAE87209.1| unnamed protein product [Macaca fascicularis]
Length = 453
Score = 34.7 bits (78), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/148 (17%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + N ++++ G++ ++ Y
Sbjct: 295 TEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAY 354
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + E + I Q + + ++ DP
Sbjct: 355 PIQQAKALGLQFHSRILDIDNIDLAMGKMMEPGPVLIITFQAQLVMVVRNPKGEVVEGDP 414
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLI 226
+ +++ +W R+ NP W L+
Sbjct: 415 DKVLRMLYVWALYRDQDELNPYAAWRLL 442
Searching..................................................done
Results from round 2
>gi|218661852|ref|ZP_03517782.1| import inner membrane translocase subunit Tim44 [Rhizobium etli
IE4771]
Length = 234
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ G+ +D +I+ + GT LN+ +R + F+PK+FLN AR +YE IV ++
Sbjct: 61 RRDATGEDEDRFAAIDAVAAPGTPLNESLRALNKADPSFNPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R+S + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGERESRGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATESEH 233
>gi|218673282|ref|ZP_03522951.1| import inner membrane translocase subunit Tim44 [Rhizobium etli
GR56]
Length = 234
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ + GT LN+ +R + F+PK+FLN AR +YE IV ++
Sbjct: 61 RRDATAEDEDRFAAIDAVAAPGTPLNESLRALNKADPSFNPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATESEH 233
>gi|39933380|ref|NP_945656.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris CGA009]
gi|39653005|emb|CAE25747.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 289
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 117/233 (50%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + + + ++++
Sbjct: 56 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDNNVVSMPGTVIDQ 115
Query: 65 ------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D + + L + I + FD + F+ A+++YE IV +F
Sbjct: 116 APMAPNADVVPPSDRWKGIAEPDSELEHGLNAIAQNDSSFDAQHFITGAKSAYEMIVMAF 175
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G ++ L+ S VY+ F+ ++ R+ N+ V++ V I+ ++I+A + + T +T+
Sbjct: 176 ANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVETRFVSIEKAELISAELRDRTAMLTL 235
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ V Q ISA+ DK ++ P+ + D+WTF R+ +PNW L+ T G
Sbjct: 236 KFVSQMISATRDKTGAVVDGSPDKVVDITDVWTFARDTSSRDPNWKLVGTGSG 288
>gi|328545867|ref|YP_004305976.1| Import inner membrane translocase subunit Tim44 [polymorphum gilvum
SL003B-26A1]
gi|326415607|gb|ADZ72670.1| Import inner membrane translocase subunit Tim44 [Polymorphum gilvum
SL003B-26A1]
Length = 242
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 128/238 (53%), Gaps = 14/238 (5%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD------------- 55
D ++F + FVF +LR VLGK+TGNE+P +S ++
Sbjct: 5 FDIYNIIFLALAIFVFFRLRSVLGKRTGNERPPFDPYSKPARDNRAPGGAEAGGVDNVIP 64
Query: 56 -ERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ G G + ++++ P G+ LN +R I+SV F+P+ FL AR +YE I
Sbjct: 65 LPGKPVEAGAGDTERGAVVLDKVAPSGSALNAALRQILSVDRSFEPEQFLQGARAAYEMI 124
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
V +F EG ++ L+ VY F ++S R++ + ++S+ VGID I+ A+++ +
Sbjct: 125 VTAFAEGDRKTLKNLLSKEVYDGFVTAISEREARGETIESTFVGIDKADIVEAALKGSVA 184
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+T+R+ + ISA+ DKD ++ DP +V+DIWTF R+ +PNW L++T+ E
Sbjct: 185 QVTVRLQSELISATRDKDGHVVDGDPSRVTEVVDIWTFARDTTSRDPNWKLVATESAE 242
>gi|299133204|ref|ZP_07026399.1| import inner membrane translocase subunit Tim44 [Afipia sp. 1NLS2]
gi|298593341|gb|EFI53541.1| import inner membrane translocase subunit Tim44 [Afipia sp. 1NLS2]
Length = 234
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG++TG+E+P + + D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPYDRVTRDVAPTGNDNNVVRMPGTAVDQA 61
Query: 70 NLDSINEL----------FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
L + + L + + + F+ + F++ A+++YE IV +F
Sbjct: 62 TLAPSADPVSPRERWKGIAAPDSELASGLDQVAAADPSFNAQHFISGAKSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ S VY F + R+ + V++ ID ++++A + + ++T+R
Sbjct: 122 NGDRRTLKDLLSSDVYDGFEAVIKGREQQGEKVETKFASIDKAELVSAGVRDKLAHLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
V Q I+A+ DKD +I +PE V D+WTF R++ +PNW L+ T+ G
Sbjct: 182 FVSQMITATRDKDGAVIDGNPEKLTDVTDVWTFSRDVSSRDPNWKLVGTESGH 234
>gi|209551513|ref|YP_002283430.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209537269|gb|ACI57204.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 234
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 KG----KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATTEDEDRFAAIDAFAAPGTPLNESLRALNKADPAFSPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGERETRGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
I+ Q ISA+YDK ++LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IISQLISATYDKADVLIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATESEH 233
>gi|27375753|ref|NP_767282.1| hypothetical protein blr0642 [Bradyrhizobium japonicum USDA 110]
gi|27348891|dbj|BAC45907.1| blr0642 [Bradyrhizobium japonicum USDA 110]
Length = 235
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG---- 65
D ++F + F+FL+LR VLG++TGNE+P + + ++ ++T+
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGNERPPFDHTAARNALGGAQDKNVVTMPGKVIDQ 61
Query: 66 -------KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ D L GT L + + IV + FDP+ F++ AR +YE IV +F
Sbjct: 62 APLAPTVEPTPPSDRWKGLTEPGTALAQGLDAIVDKDSTFDPRHFISGARGAYEMIVLAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A+ L+ S VY+ F+ ++ R+ NE+ ++ V ID +++ A + + T +TI
Sbjct: 122 ANGDRRALRDLLSSEVYESFDAAIKEREKNEQKTETRFVSIDKAELVGAELRDRTAQLTI 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
R V Q ISA+ DK ++ + + DIWTF R+I +PNW L+ T
Sbjct: 182 RFVSQMISATRDKAGNIVDGSADTVADITDIWTFARDITSRDPNWKLVGTGSA 234
>gi|86355677|ref|YP_467569.1| putative translocase transmembrane protein [Rhizobium etli CFN 42]
gi|86279779|gb|ABC88842.1| putative translocase transmembrane protein [Rhizobium etli CFN 42]
Length = 234
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP +S + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYSPREAAPPEAAEAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ +D +I+ GT LN+ +R + F PK+FLN AR +YE +V ++
Sbjct: 61 RRDATADDEDRFSAIDAFAAPGTPLNESLRALNKADPSFSPKEFLNGARMAYEMVVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKSLLSREVYDGFEAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATESEH 233
>gi|116249774|ref|YP_765612.1| hypothetical protein RL0008 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254422|emb|CAK05496.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 234
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 KG----KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATTEDEDRFAAIDAFAAPGTPLNESLRALNKADPAFSPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
I Q ISA+YDK ++LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IASQLISATYDKADVLIEGDAENVAEVNDVWTFARDTRSRDPNWKLVATESEH 233
>gi|227823867|ref|YP_002827840.1| putative import inner membrane translocase, subunit Tim44
[Sinorhizobium fredii NGR234]
gi|227342869|gb|ACP27087.1| putative import inner membrane translocase, subunit Tim44
[Sinorhizobium fredii NGR234]
Length = 233
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 128/231 (55%), Gaps = 6/231 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV--FSKRDERGIITLG 63
M S DF+ F +FLQLR VLG++TGNE+P +S + RD ++ L
Sbjct: 1 MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGNERPPFDPYSPREAQGPEARDNGKVVQLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + + +I+ GT LN +R + F P +FLN A+ +YE IV +F
Sbjct: 61 RRESTAEDESRYAAIDGFSKPGTPLNGQLRALSDADPSFQPAEFLNGAKMAYEMIVMAFA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY+ F +++ R++ + VKS+ VGI+ I++A +++ +T+R
Sbjct: 121 DGDRKTLKGLLSREVYEGFETAIAERETRGEVVKSTFVGIEKADIVHAELKDAEENVTVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I+ Q ISA+YDK LI D + +V D+WTF R+I +PNW LI+T+
Sbjct: 181 IISQLISATYDKQGKLIDGDADSVAEVNDLWTFARDIRSRDPNWKLIATES 231
>gi|241206951|ref|YP_002978047.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860841|gb|ACS58508.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 234
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 KG----KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATTEDEDRFAAIDAFAAPGTPLNESLRALNKADPAFTPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGSEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
I Q ISA+YDK ++LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 181 IASQLISATYDKADVLIEGDAENVAEVNDVWTFARDTRSRDPNWKLVATESEH 233
>gi|222147023|ref|YP_002547980.1| Membrane associated transporter protein [Agrobacterium vitis S4]
gi|221734013|gb|ACM34976.1| Membrane associated transporter protein [Agrobacterium vitis S4]
Length = 232
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 5/232 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY--VFSKRDERGIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP F+G+ ++ ++TL
Sbjct: 1 MGSNDFVTLFFLVAAVLIFWQLRSVLGRRTGNEKPPKDPFAGRPDAASPAAEDARVVTLP 60
Query: 64 KGKKKD---NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + D +I+ P GT LN+ +R +V V F PK+FLN AR +YE IV +F
Sbjct: 61 RRDEADGEERQTAIDAYAPAGTPLNQQLRQVVEVDPSFVPKEFLNGARMAYEMIVTAFAA 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G +++ L+ VY F+ +++ R+ + +KS+ VGID +I +A + + V IT+R+
Sbjct: 121 GDRKSLKDLLSREVYDGFDAAITEREQRGEVMKSTFVGIDKAEITSAEVRDQEVQITVRL 180
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
V Q ISA+YD +I D E G V DIWTF R+ +PNW LI+T+ +
Sbjct: 181 VSQLISATYDSQGAVIEGDAESVGDVNDIWTFARDTRSRDPNWKLIATESDQ 232
>gi|222084209|ref|YP_002542735.1| translocase transmembrane protein [Agrobacterium radiobacter K84]
gi|221721657|gb|ACM24813.1| translocase transmembrane protein [Agrobacterium radiobacter K84]
Length = 233
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 134/233 (57%), Gaps = 6/233 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV---FSKRDERGIITL 62
M + DF+ + F +F QLR VLG++TGNEKP + + D ++TL
Sbjct: 1 MGANDFVTIFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYGSPDQATGPNAPDAGKVVTL 60
Query: 63 GKG---KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ P GT LN +R++ F PK+F+N AR +YE IV +F
Sbjct: 61 PRRDATEDEDRFAAIDAFTPAGTPLNDSLRELNKADPSFSPKEFVNGARMAYEMIVMAFA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G +A++ L+ VY+ F+ +++ R++ + VKS+ VGID I++A +++ +T+R
Sbjct: 121 DGDRNALKGLLSREVYEGFDAAITDRETKGEKVKSTFVGIDKADIVSAEMKDTEATVTMR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IV Q ISA+YDK LI D E ++ D+WTF R+ +PNW L++T+ +
Sbjct: 181 IVSQMISATYDKAGTLIDGDAETVAEISDVWTFARDSRSRDPNWKLVATESEQ 233
>gi|90421823|ref|YP_530193.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB18]
gi|90103837|gb|ABD85874.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB18]
Length = 233
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG+KTGNE+P + V +D + +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQKTGNERPPFDRAARDVVRGAQDNVVPLPGAVVDQAP 61
Query: 70 NLDSINELFP---------IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
S + + P GT L + + IV+ + FDP+ FL AR +YE IV +F
Sbjct: 62 QTPSADVVPPTDRWKGVAEPGTPLAQGLNAIVAQDSSFDPQHFLTGARGAYEMIVLAFAN 121
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G A++ L+ VY F + R+ E+ ++ V ID ++++A + +T+R
Sbjct: 122 GDRRALKDLLSPEVYDSFEAVIREREKQEQKTETRFVSIDKAELVSAEARDRAAQLTVRF 181
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
V Q I+ + DK ++ +P+ + D+WTF R++ +PNW L+ T
Sbjct: 182 VSQMITVTRDKTGAIVDGNPDKVADITDVWTFARDVGSRDPNWKLVGTGS 231
>gi|319780601|ref|YP_004140077.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166489|gb|ADV10027.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 235
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 8/235 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGK---YVFSKRDERGIITL 62
M DF + F +F QLR VLG++TG+E+P +S + + +++L
Sbjct: 1 MGFFDFGTIFFLIAAVVIFFQLRNVLGRRTGSERPPFDPYSAARTGDKDAAQKSENVVSL 60
Query: 63 G-----KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
D +I+ T LNK +R I F+PK F++ A+ +YE IV +
Sbjct: 61 PRKRPPGEPAPDAYAAIDAFAKPDTDLNKGLRTIKDNDPSFEPKGFVDGAKMAYEMIVMA 120
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
+ +G ++ L+ VY F ++ R++ + ++SS VGID I++A ++ ++T
Sbjct: 121 YADGDRKTLKNLLSREVYDGFVAAIGEREAKAEKIQSSFVGIDKADIVSAEMKGGEAHVT 180
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+RI+ + ISA+ DK +I DPE +V D+WTF R+ +PNW L++T+ +
Sbjct: 181 LRIISELISATRDKAGAVIDGDPETVAEVKDVWTFARDTRSRDPNWKLVATEEED 235
>gi|260467422|ref|ZP_05813593.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
opportunistum WSM2075]
gi|259028818|gb|EEW30123.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
opportunistum WSM2075]
Length = 236
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 70/236 (29%), Positives = 124/236 (52%), Gaps = 9/236 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGK---YVFSKRDERGIITL 62
M DF + F +F QLR VLG++TG+E+P ++ + + +++L
Sbjct: 1 MGFFDFGTIFFLIAAVVIFFQLRNVLGRRTGSERPPFDPYTAARTGDKDAAQKPENVVSL 60
Query: 63 G------KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
+ D +I+ T LNK +R I FDPK F++ A+ +YE IV
Sbjct: 61 PRKRLPGEPAAPDAYAAIDAFAKPDTDLNKGLRTIKDNDPSFDPKGFVDGAKMAYEMIVM 120
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
++ +G ++ L+ V+ F ++ R++ + ++SS VGID I++A ++ ++
Sbjct: 121 AYADGDRKTLKNLLSREVFDGFVAAIGEREAKSEKIQSSFVGIDKADIVSAEMKGGEAHV 180
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
T+RI+ + ISA+ DK +I DPE +V D+WTF R+ +PNW L++T+ +
Sbjct: 181 TLRIISELISATRDKAGTVIDGDPETVAEVKDVWTFARDTRSRDPNWKLVATEEED 236
>gi|239833115|ref|ZP_04681444.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
intermedium LMG 3301]
gi|239825382|gb|EEQ96950.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
intermedium LMG 3301]
Length = 253
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 35 IAAVIIFLQLRNVLGRRTGNEKPPFDPYTSARSADAAPAGSETDNVVSLPRRTGEKDFTA 94
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I++ P GT +N +R I + FDP F++ + +YE IV SF +G ++ L+
Sbjct: 95 IDKAAPAGTPVNDGLRAIYAADPSFDPASFVDGVKIAYEMIVMSFADGDRKVLKNLLSKD 154
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R++ ++V+SS VGID +I A ++ + ++T+ IV Q IS++YDKD
Sbjct: 155 VYEGFVSAIDEREARGESVRSSFVGIDKAEITGAEMKGSEAHVTVNIVSQMISSTYDKDG 214
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
LI DPE ++ D+WTF R+ +PNW L++T+ +
Sbjct: 215 KLIDGDPENVLEIKDLWTFARDTRSRDPNWKLVATEAED 253
>gi|192288736|ref|YP_001989341.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
gi|192282485|gb|ACE98865.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
Length = 235
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 117/233 (50%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + + + ++++
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDNNVVSMPGTVIDQ 61
Query: 65 ------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D + + L + I + FD + F+ A+++YE IV +F
Sbjct: 62 APMAPNADVVPPSDRWKGIAEPDSELEHGLNAIAQNDSSFDAQHFITGAKSAYEMIVMAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G ++ L+ S VY+ F+ ++ R+ N+ V++ V I+ ++I+A + + T +T+
Sbjct: 122 ANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVETRFVSIEKAELISAELRDRTAMLTL 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ V Q ISA+ DK ++ P+ + D+WTF R+ +PNW L+ T G
Sbjct: 182 KFVSQMISATRDKTGAVVDGSPDKVVDITDVWTFARDTSSRDPNWKLVGTGSG 234
>gi|118591473|ref|ZP_01548870.1| Calcium-binding EF-hand [Stappia aggregata IAM 12614]
gi|118435801|gb|EAV42445.1| Calcium-binding EF-hand [Stappia aggregata IAM 12614]
Length = 230
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 14/229 (6%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR----DERGIITLGKGKKKDNLDS 73
+ F+ +LR VLGK+TGNE+P +S R D+ +I L +D
Sbjct: 2 GLAVFILFRLRSVLGKRTGNERPPFDPYSKPDQQRDRKNGNDQDNVIPLPNQPMQDAETV 61
Query: 74 ----------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
I+++ P G+ LN ++ I+SV F+P+ FL AR +YE IV +F +G
Sbjct: 62 EDTGRGGDVVIDKVAPAGSALNSALKQILSVDRSFEPEPFLEGARAAYEMIVMAFADGDK 121
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
A++ L+ VY+ F ++ R+ + ++S+ VGID +I+ A+++ +T +T++I Q
Sbjct: 122 KALKNLLSREVYEGFVAAIDEREKRGETIESTFVGIDKAEIVEAALKNSTAQVTVKIHSQ 181
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
ISA+ DK+ ++ DP +VIDIWTF R+ +PNW L++T+ E
Sbjct: 182 LISATRDKNGEVVDGDPAKVSEVIDIWTFARDTTSRDPNWKLVATESAE 230
>gi|15963761|ref|NP_384114.1| putative translocase transmembrane protein [Sinorhizobium meliloti
1021]
gi|307302564|ref|ZP_07582321.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti BL225C]
gi|307316105|ref|ZP_07595549.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti AK83]
gi|15072936|emb|CAC41395.1| Import inner membrane translocase subunit TIM44 [Sinorhizobium
meliloti 1021]
gi|306897945|gb|EFN28687.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti AK83]
gi|306903234|gb|EFN33824.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti BL225C]
Length = 233
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV---FSKRDERGIITL 62
M S DF+ F +FLQLR VLG++TG+E+P +S + + +D ++ L
Sbjct: 1 MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGSERPPFDPYSPRDIAQGPEAKDNGKVVQL 60
Query: 63 GK---GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + + +I + GT LN +R + +F+P +FLN A+ +YE IV +F
Sbjct: 61 PRRETAEDESRYAAIEIVAKAGTPLNAQLRAMTDADPNFNPAEFLNGAKMAYEMIVMAFA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY+ F +++ R++ + VKS+ VGID I++A I++ IT+R
Sbjct: 121 DGDRKTLKGLLSREVYEGFEAAIAEREAKGEVVKSTFVGIDKADIVHAEIKDAEENITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I+ Q ISA+YDK L+ D + +V D+WTF R+I +PNW LI+T+
Sbjct: 181 IISQLISATYDKQGKLVDGDADSVAEVNDLWTFARDIRSRDPNWKLIATES 231
>gi|91974901|ref|YP_567560.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB5]
gi|91681357|gb|ABE37659.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB5]
Length = 235
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + + + ++ +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDNNVVPMPGTVIDQ 61
Query: 65 ------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D + + L + ++ + FD FL A+++YE IV +F
Sbjct: 62 SPTAPNADVVPPSDRWKGIAEPDSPLAHGLNAVLVQDSSFDANHFLTGAKSAYEMIVMAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A+ L+ + VY F+ ++ R+ NE+ ++ V ID +++ A + E+T +T+
Sbjct: 122 ANGDRRALRDLLSTEVYDSFDAAIKDREKNERKTETRFVAIDKAELLGAEVREHTAQLTV 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ V Q IS + DK ++ +P+ + D+WTF R+I +PNW L+ T G
Sbjct: 182 KFVSQMISVTRDKAGAIVDGNPDKVADITDVWTFARDISSRDPNWKLVGTGSGH 235
>gi|325291461|ref|YP_004277325.1| hypothetical protein AGROH133_02812 [Agrobacterium sp. H13-3]
gi|325059314|gb|ADY63005.1| hypothetical protein AGROH133_02812 [Agrobacterium sp. H13-3]
Length = 232
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 134/232 (57%), Gaps = 5/232 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR--DERGIITLG 63
M DF+ L F +FLQLR VLG++TGNEKP ++ + V D+ ++TL
Sbjct: 1 MGFSDFITLFFLVAAVLIFLQLRSVLGRRTGNEKPPFDPYTPRDVAKGPVTDDNKVVTLP 60
Query: 64 ---KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + ++ + L P+ T LN +R++++ F PK+FLN AR +YE IV F +
Sbjct: 61 KRSEAEDENRFAEADALAPVDTALNTSLRELMTKDPTFRPKEFLNGARMAYEMIVMGFAD 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G ++ L+ V+ F ++S R+S + VKS+ VGI+ I A I ++ IT+RI
Sbjct: 121 GDRKTLKNLLSKEVFDGFEAAISERESRGEVVKSTFVGIEKADITQAGIRDSEEQITLRI 180
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
V Q ISA+YDKD L+ DP+ +V DIWTF R++ +PNW LI+T+ +
Sbjct: 181 VSQLISATYDKDGKLVDGDPDAVAEVDDIWTFSRDVRSRDPNWKLIATESEQ 232
>gi|110635813|ref|YP_676021.1| import inner membrane translocase, subunit Tim44 [Mesorhizobium sp.
BNC1]
gi|110286797|gb|ABG64856.1| import inner membrane translocase, subunit Tim44 [Chelativorans sp.
BNC1]
Length = 235
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 127/235 (54%), Gaps = 8/235 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE-----RGII 60
M+ DF + F +F QLR VLG++TG+E+P ++ E ++
Sbjct: 1 MEFFDFGTIFFLVAAVVIFFQLRNVLGRRTGSERPPFDPYTAGRSRPAEAEKSVKNDTVV 60
Query: 61 TLGKGK---KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
L + K ++ + I+++ GT LN+ +R I FDP F++ A+ +YE IV +
Sbjct: 61 ALPRRKGLVDEERYNIIDKVAQPGTELNRGLRAIKDADPSFDPNTFVDGAKLAYEMIVMA 120
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
F +G ++ L+ VY+ F ++ R+ + ++SS VGID II+A ++ + ++T
Sbjct: 121 FADGDRRTLKNLLSREVYEGFVSAIDERERRSEKIESSFVGIDKATIISAEMKGSEAHVT 180
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+RIV + ISA+ D +I DPE +V DIWTF R+ +PNW L++T+ E
Sbjct: 181 LRIVSELISATRDSGGSIIDGDPETVAEVKDIWTFARDTRSRDPNWKLVATEAEE 235
>gi|115522403|ref|YP_779314.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisA53]
gi|115516350|gb|ABJ04334.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisA53]
Length = 233
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 9/232 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK- 68
D ++F + F+FL+LR VLG++TG+E+P + + ++ +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGDERPPYDRAARDLLRGSQEGNVVPMPSPSIDPT 61
Query: 69 --------DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
D + + L + I + + FD + FL+ AR +YE IV +F
Sbjct: 62 LAPSADVTPPSDRWKSVAAPDSPLEHGLNAIAAHDSGFDAQHFLSGARGAYEMIVLAFAN 121
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G A++ L+ S VY F ++ R+ N+ ++ V ID +++ A + + + +T+R
Sbjct: 122 GDRRALKDLLSSEVYDSFEAAIREREKNDHKTETRFVSIDKAELVTAEVRDRSAQLTVRF 181
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
V Q I+ + DK ++ +P+ + D+WTF R++ +PNW L+ T G+
Sbjct: 182 VSQMITVTRDKTGAIVDGNPDKVADITDVWTFARDVASRDPNWKLVGTGSGQ 233
>gi|150398408|ref|YP_001328875.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
medicae WSM419]
gi|150029923|gb|ABR62040.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
medicae WSM419]
Length = 234
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 131/232 (56%), Gaps = 7/232 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV---FSKRDERGIITL 62
M S DF+ F +FLQLR VLG++TG+E+P +S + + +D ++ L
Sbjct: 1 MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGSERPPFDPYSSRDIAQGPEAKDNGKVVQL 60
Query: 63 GK----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ + + I + GT LN +R + +F+P +FLN A+ +YE IV +F
Sbjct: 61 PRRDGAAEDESRYAEIETVAKAGTPLNAQLRAVTDADPNFNPVEFLNGAKMAYEMIVMAF 120
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G ++ L+ VY+ F +++ R++ + VKS+ VGID I++A I+++ IT+
Sbjct: 121 ADGDRKTLKGLLSREVYEGFEAAIAERENKGEVVKSTFVGIDKADIVHAEIKDSEENITV 180
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
RI+ Q ISA+YDK L+ D E +V D+WTF R+I +PNW LI+T+
Sbjct: 181 RIISQLISATYDKQGKLVDGDAESVAEVNDLWTFSRDIRSRDPNWKLIATES 232
>gi|307943366|ref|ZP_07658710.1| import inner membrane translocase subunit Tim44 [Roseibium sp.
TrichSKD4]
gi|307772996|gb|EFO32213.1| import inner membrane translocase subunit Tim44 [Roseibium sp.
TrichSKD4]
Length = 244
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 133/240 (55%), Gaps = 16/240 (6%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE------RGIITL 62
D ++F + F+ +L+ VLGK+TGNE+P +S + + + +I +
Sbjct: 5 FDVYNIIFLGLAVFILFRLKSVLGKRTGNERPPFDPYSKQDDAGQSSQGGKSQSDNVIPM 64
Query: 63 GKG----------KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+++ I++L P GT LN+ ++ I+SV F+P++F+ A +YE
Sbjct: 65 PGQESYQETGIREPEENGEVVIDKLAPQGTALNEALKQILSVDRTFEPREFIEGASAAYE 124
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
IV +F EG +++L+ V+ F ++ R+ ++ ++S+ VGID +I+ A++++
Sbjct: 125 MIVTAFAEGDRKTLKQLLSKDVFDGFIMAIDEREKRDEVIESTFVGIDKAEIVEAALKDG 184
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
T +T+++ Q ISA+ DKD ++ DP +VIDIWTF R+ +PNW L++T+ E
Sbjct: 185 TAQVTVKVQSQLISATCDKDGEVVDGDPNKVSEVIDIWTFARDTGSRDPNWKLVATESAE 244
>gi|316931716|ref|YP_004106698.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
gi|315599430|gb|ADU41965.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
Length = 258
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 119/233 (51%), Gaps = 11/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TGNE+P + + + S + + +I++
Sbjct: 25 DIYTIIFLALAVFIFLRLRNVLGQRTGNERPPFDRAAARDMISGKQDNNVISMPGTVIDQ 84
Query: 65 ------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D + + L + I + FD + F++ A+++YE IV +F
Sbjct: 85 APIAPNADVVPPSDRWKGIAEPDSELEHGLNAIAQHDSSFDARHFVDGAKSAYEMIVMAF 144
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G ++ L+ S VY+ F+ ++ R+ N+ V+S V I+ ++I+A + + T +T+
Sbjct: 145 ANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVESRFVAIEKAELISAELRDRTAMLTL 204
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ V Q ISA+ DK ++ P+ + D+WTF R+ +PNW L+ T G
Sbjct: 205 KFVSQMISATRDKTGAVVDGSPDKVTDITDVWTFARDTSSRDPNWKLVGTGSG 257
>gi|209883544|ref|YP_002287401.1| import inner membrane translocase, subunit Tim44 [Oligotropha
carboxidovorans OM5]
gi|209871740|gb|ACI91536.1| import inner membrane translocase, subunit Tim44 [Oligotropha
carboxidovorans OM5]
Length = 234
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG++TG+E+P + S D + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRITRDMARSGNDNNVVKMPGTTIDQT 61
Query: 70 NLDSINELFP----------IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
L + P T L + ++ + F+ + F++ A+++YE IV +F
Sbjct: 62 PLAPAADPIPAQDRWKGIAEPDTPLATGLDEVAAADPSFNAQHFVSGAKSAYEMIVQAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ + VY F + R+ + V++ ID +++A + + ++T+R
Sbjct: 122 SGDRRMLKDLLSAEVYDGFEAVIKGREQRGEKVETRFASIDKAALVSAGVRDRIAHLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
V Q I+ + DKD +I +PE V D+WTF R++ +PNW L+ T+ G
Sbjct: 182 FVSQMITVTRDKDGAVIDGNPEKLTDVTDVWTFSRDVSSRDPNWKLVGTESG 233
>gi|92115749|ref|YP_575478.1| import inner membrane translocase, subunit Tim44 [Nitrobacter
hamburgensis X14]
gi|91798643|gb|ABE61018.1| import inner membrane translocase, subunit Tim44 [Nitrobacter
hamburgensis X14]
Length = 234
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D ++F + F+FL+LR VLG++TG+E+P + + + +D+ + G +
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDRATREVLHGTQDKNVVPMAGPVIDQA 61
Query: 70 NLDSINE----------LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + L GT L + I + + FDPK F++ AR++YE IV +F
Sbjct: 62 SSAPTADAASTPDRWKNLAEPGTPLALGLDAIAAHDSSFDPKHFISGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ S VY+ F+ ++ R+ E+ ++ V ID +++I A + ++ +T+R
Sbjct: 122 NGDRRTLKDLLSSDVYESFDAAIKDREKLEQKTETRFVSIDKVELIGAELRDSAEQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ Q IS + DK ++ +PE + D+WTF R+IP +PNW L+ T +
Sbjct: 182 FISQMISMTRDKTGAIVDGNPEKISDITDVWTFARDIPSRDPNWKLVGTGSTD 234
>gi|86747526|ref|YP_484022.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris HaA2]
gi|86570554|gb|ABD05111.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris HaA2]
Length = 235
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK----- 64
D ++F + F+FL+LR VLG++TG+E+P + + + + + ++++
Sbjct: 2 DIYTIIFLALAVFIFLRLRNVLGQRTGSERPPFDRAAARDMIPGKQDTNVVSMPGSVIDQ 61
Query: 65 ------GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D + + L + + + + FD FL+ A+ +YE IV +F
Sbjct: 62 SPIAPSADVVPPSDRWKGIAEPDSPLEHGLNAVFTQDSSFDANHFLSGAKGAYEMIVMAF 121
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A++ L+ S VY+ F ++ R+ NE ++ V I+ +++ A + ++ +T+
Sbjct: 122 ANGDRRALKDLLSSEVYESFEAAIKDREKNELKTETRFVAIEKAELLGAEVRDHVAQLTV 181
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ V Q IS + DK ++ P+ + D+WTF R+I +PNW L+ T
Sbjct: 182 KFVSQMISVTRDKAGAVVDGSPDKVADITDVWTFARDISSRDPNWKLVGT 231
>gi|23502922|ref|NP_699049.1| hypothetical protein BR2074 [Brucella suis 1330]
gi|82700829|ref|YP_415403.1| calcium-binding EF-hand [Brucella melitensis biovar Abortus 2308]
gi|225626454|ref|ZP_03784493.1| import inner membrane translocase subunit Tim44 [Brucella ceti str.
Cudo]
gi|237816425|ref|ZP_04595418.1| Tim44-like domain protein [Brucella abortus str. 2308 A]
gi|256370472|ref|YP_003107983.1| hypothetical protein BMI_I2096 [Brucella microti CCM 4915]
gi|23348955|gb|AAN30964.1| conserved hypothetical protein [Brucella suis 1330]
gi|82616930|emb|CAJ12031.1| Calcium-binding EF-hand [Brucella melitensis biovar Abortus 2308]
gi|225618111|gb|EEH15154.1| import inner membrane translocase subunit Tim44 [Brucella ceti str.
Cudo]
gi|237788492|gb|EEP62707.1| Tim44-like domain protein [Brucella abortus str. 2308 A]
gi|256000635|gb|ACU49034.1| hypothetical protein BMI_I2096 [Brucella microti CCM 4915]
Length = 235
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 17 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 76
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 77 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 136
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 137 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 196
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 197 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 235
>gi|161619988|ref|YP_001593875.1| import inner membrane translocase subunit Tim44 [Brucella canis
ATCC 23365]
gi|163844092|ref|YP_001628496.1| import inner membrane translocase subunit Tim44 [Brucella suis ATCC
23445]
gi|189025131|ref|YP_001935899.1| Calcium-binding EF-hand [Brucella abortus S19]
gi|254690207|ref|ZP_05153461.1| Calcium-binding EF-hand [Brucella abortus bv. 6 str. 870]
gi|254694697|ref|ZP_05156525.1| Calcium-binding EF-hand [Brucella abortus bv. 3 str. Tulya]
gi|254696324|ref|ZP_05158152.1| Calcium-binding EF-hand [Brucella abortus bv. 2 str. 86/8/59]
gi|254700706|ref|ZP_05162534.1| Calcium-binding EF-hand [Brucella suis bv. 5 str. 513]
gi|254705077|ref|ZP_05166905.1| Calcium-binding EF-hand [Brucella suis bv. 3 str. 686]
gi|254709052|ref|ZP_05170863.1| Calcium-binding EF-hand [Brucella pinnipedialis B2/94]
gi|254713521|ref|ZP_05175332.1| Calcium-binding EF-hand [Brucella ceti M644/93/1]
gi|254716123|ref|ZP_05177934.1| Calcium-binding EF-hand [Brucella ceti M13/05/1]
gi|254718117|ref|ZP_05179928.1| Calcium-binding EF-hand [Brucella sp. 83/13]
gi|254731240|ref|ZP_05189818.1| Calcium-binding EF-hand [Brucella abortus bv. 4 str. 292]
gi|256030577|ref|ZP_05444191.1| Calcium-binding EF-hand [Brucella pinnipedialis M292/94/1]
gi|256060039|ref|ZP_05450221.1| Calcium-binding EF-hand [Brucella neotomae 5K33]
gi|260169483|ref|ZP_05756294.1| Calcium-binding EF-hand [Brucella sp. F5/99]
gi|260546180|ref|ZP_05821920.1| calcium-binding EF-hand protein [Brucella abortus NCTC 8038]
gi|260567455|ref|ZP_05837925.1| calcium-binding EF-hand protein [Brucella suis bv. 4 str. 40]
gi|260755747|ref|ZP_05868095.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 6 str. 870]
gi|260758971|ref|ZP_05871319.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 4 str. 292]
gi|260760695|ref|ZP_05873038.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 2 str. 86/8/59]
gi|261215024|ref|ZP_05929305.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 3 str. Tulya]
gi|261217893|ref|ZP_05932174.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261316550|ref|ZP_05955747.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|261321257|ref|ZP_05960454.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
gi|261324015|ref|ZP_05963212.1| import inner membrane translocase subunit Tim44 [Brucella neotomae
5K33]
gi|261751215|ref|ZP_05994924.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|261755779|ref|ZP_05999488.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|261759008|ref|ZP_06002717.1| calcium-binding EF-hand protein [Brucella sp. F5/99]
gi|265983069|ref|ZP_06095804.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|265987624|ref|ZP_06100181.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|306839744|ref|ZP_07472546.1| import inner membrane translocase subunit Tim44 [Brucella sp. NF
2653]
gi|306842810|ref|ZP_07475450.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO2]
gi|306843493|ref|ZP_07476094.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO1]
gi|161336799|gb|ABX63104.1| import inner membrane translocase subunit Tim44 [Brucella canis
ATCC 23365]
gi|163674815|gb|ABY38926.1| import inner membrane translocase subunit Tim44 [Brucella suis ATCC
23445]
gi|189020703|gb|ACD73425.1| Calcium-binding EF-hand [Brucella abortus S19]
gi|260096287|gb|EEW80163.1| calcium-binding EF-hand protein [Brucella abortus NCTC 8038]
gi|260156973|gb|EEW92053.1| calcium-binding EF-hand protein [Brucella suis bv. 4 str. 40]
gi|260669289|gb|EEX56229.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 4 str. 292]
gi|260671127|gb|EEX57948.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 2 str. 86/8/59]
gi|260675855|gb|EEX62676.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 6 str. 870]
gi|260916631|gb|EEX83492.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 3 str. Tulya]
gi|260922982|gb|EEX89550.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261293947|gb|EEX97443.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
gi|261295773|gb|EEX99269.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|261299995|gb|EEY03492.1| import inner membrane translocase subunit Tim44 [Brucella neotomae
5K33]
gi|261738992|gb|EEY26988.1| calcium-binding EF-hand protein [Brucella sp. F5/99]
gi|261740968|gb|EEY28894.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|261745532|gb|EEY33458.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|264659821|gb|EEZ30082.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|264661661|gb|EEZ31922.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|306276184|gb|EFM57884.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO1]
gi|306287004|gb|EFM58515.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO2]
gi|306405204|gb|EFM61481.1| import inner membrane translocase subunit Tim44 [Brucella sp. NF
2653]
Length = 231
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 133 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|75674306|ref|YP_316727.1| hypothetical protein Nwi_0107 [Nitrobacter winogradskyi Nb-255]
gi|74419176|gb|ABA03375.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 234
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 10/232 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL------- 62
D ++F + F+FL+LR VLG++TG+E+P + + + +D +
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDRATREVLGGTQDNNVVPVPGTVINQS 61
Query: 63 ---GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
D + GT L + I + + FDP FL+ AR++YE IV +F
Sbjct: 62 SAAPSADVGGAADRWKSVAEPGTPLALGLDAIAAQDSSFDPAHFLSGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ S VY+ F+ ++ R+ E+ ++ V ID +++I A + + +T+R
Sbjct: 122 NGDRRTLKDLLSSDVYESFDAAIKDRERLEQKTETRFVSIDKVELIGAEVRDGAEQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ Q IS + DK ++ +PE + D+WTF R+I +PNW L+ T
Sbjct: 182 FISQMISVTRDKTGAIVDGNPEKISDITDVWTFARDISSRDPNWKLVGTGSA 233
>gi|256112399|ref|ZP_05453320.1| transporter [Brucella melitensis bv. 3 str. Ether]
gi|265993836|ref|ZP_06106393.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
gi|262764817|gb|EEZ10738.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
Length = 231
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGGPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 133 VYEGFVAAIDEREKQGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|225853505|ref|YP_002733738.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis ATCC 23457]
gi|256045678|ref|ZP_05448556.1| transporter [Brucella melitensis bv. 1 str. Rev.1]
gi|256263013|ref|ZP_05465545.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 2 str. 63/9]
gi|260562979|ref|ZP_05833465.1| calcium-binding EF-hand protein [Brucella melitensis bv. 1 str.
16M]
gi|265992099|ref|ZP_06104656.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|225641870|gb|ACO01784.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis ATCC 23457]
gi|260152995|gb|EEW88087.1| calcium-binding EF-hand protein [Brucella melitensis bv. 1 str.
16M]
gi|263003165|gb|EEZ15458.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|263092886|gb|EEZ17061.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 2 str. 63/9]
gi|326410072|gb|ADZ67137.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis M28]
gi|326539788|gb|ADZ88003.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis M5-90]
Length = 231
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGGPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 133 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|62290918|ref|YP_222711.1| hypothetical protein BruAb1_2049 [Brucella abortus bv. 1 str.
9-941]
gi|62197050|gb|AAX75350.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
Length = 231
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 133 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNMVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|297247302|ref|ZP_06931020.1| hypothetical protein BAYG_00201 [Brucella abortus bv. 5 str. B3196]
gi|297174471|gb|EFH33818.1| hypothetical protein BAYG_00201 [Brucella abortus bv. 5 str. B3196]
Length = 235
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 17 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 76
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 77 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 136
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 137 VYEGFVAAIDEREKWGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 196
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 197 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 235
>gi|294851303|ref|ZP_06791976.1| hypothetical protein BAZG_00203 [Brucella sp. NVSL 07-0026]
gi|294819892|gb|EFG36891.1| hypothetical protein BAZG_00203 [Brucella sp. NVSL 07-0026]
Length = 235
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG +TGNEKP + S + + +++L + + + +
Sbjct: 17 IAAVIIFLQLRNVLGCRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 76
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 77 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 136
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 137 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 196
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 197 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 235
>gi|158426224|ref|YP_001527516.1| mitochondrial import inner membrane translocase [Azorhizobium
caulinodans ORS 571]
gi|158333113|dbj|BAF90598.1| mitochondrial import inner membrane translocase [Azorhizobium
caulinodans ORS 571]
Length = 279
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGI--ITLGKGKK 67
D ++F + F+F++LR VLG++TG E+P F+ + + + +
Sbjct: 45 DIYTIIFLALAVFIFVRLRSVLGQRTGKERPPYDPFTPRPPAAPSSDNVVSLPERVGDAP 104
Query: 68 KDNLDSINELFP----------IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
+ +++ P G+ L + + I ++ DFD K F+ A+++YE IV +
Sbjct: 105 QRPTAPVSQPLPGTFRWKGVTEEGSPLAEALDQIAAIEPDFDAKHFVEGAKSAYEMIVLA 164
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
F G ++ L+ V+ F ++S R+ + ++S V I+ +II AS+ T +T
Sbjct: 165 FAAGDRRTLKDLLSKDVFDGFVAAISEREGRGETMESRFVAIEKAEIIEASVRGRTGQVT 224
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+R V + ISA+ +D ++ + V D+WTF R + +PNW L++T+ +
Sbjct: 225 LRFVSKIISATRSRDGAVVDGSADTVADVTDVWTFARELGARDPNWKLVATEAAQ 279
>gi|256158573|ref|ZP_05456463.1| calcium-binding EF-hand [Brucella ceti M490/95/1]
gi|256253984|ref|ZP_05459520.1| calcium-binding EF-hand [Brucella ceti B1/94]
gi|261221124|ref|ZP_05935405.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|265997084|ref|ZP_06109641.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
gi|260919708|gb|EEX86361.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|262551552|gb|EEZ07542.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
Length = 231
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 133 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQIISSTLDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|256258462|ref|ZP_05463998.1| calcium-binding EF-hand [Brucella abortus bv. 9 str. C68]
gi|260884773|ref|ZP_05896387.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
gi|260874301|gb|EEX81370.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
Length = 231
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D
Sbjct: 133 VYEGFVAAIDEREKWGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|148559170|ref|YP_001259879.1| hypothetical protein BOV_1994 [Brucella ovis ATCC 25840]
gi|148370427|gb|ABQ60406.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 231
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDRKVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS+ D+D
Sbjct: 133 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSILDRDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KVIDGDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 231
>gi|85714085|ref|ZP_01045074.1| hypothetical protein NB311A_08013 [Nitrobacter sp. Nb-311A]
gi|85699211|gb|EAQ37079.1| hypothetical protein NB311A_08013 [Nitrobacter sp. Nb-311A]
Length = 234
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 10/232 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL------- 62
D ++F + F+FL+LR VLG++TG+E+P + + + +D+ +
Sbjct: 2 DIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDGATREILRGAQDKNVVPVPGTVINQS 61
Query: 63 ---GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ D +L GT L + I + + FDP FL+ AR++YE IV +F
Sbjct: 62 SATPTADVGPSADRWKDLTEPGTALALGLDAIAAQDSSFDPGHFLSGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G ++ L+ S VY+ F+ ++ R+ E+ ++ V ID +++I A + + +T+R
Sbjct: 122 NGDRRTLKDLLSSDVYESFDAAIKDRERLEQKTETRFVSIDKVELIGAELRDGAEQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ Q IS + DK ++ +PE + D+WTF R I +PNW L+ T
Sbjct: 182 FISQMISVTRDKTGAIVDGNPERISDITDVWTFAREISSRDPNWKLVGTGSA 233
>gi|319407969|emb|CBI81623.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 230
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 4/228 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGK 64
D ++++ I VF+QLR VLGK+TG E+P +SG + D
Sbjct: 3 FDVVLVIALVIMVVVFMQLRNVLGKRTGFERPPFDPYSGCSKKQIETETVDHSLSFPHQA 62
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+K + I+ + P G+ LN +R I ++F P+ F+N + +YE I+ +F +G
Sbjct: 63 NARKKDFSEIDAIAPEGSALNDGLRAICQADSNFSPQFFVNGVQIAYEMIMTAFAQGDRD 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
++KL+ V++ F ++ R+ E+ V+ + VGI+ ++ + A +++N ++T+RIV +
Sbjct: 123 QLKKLLSQDVFESFCAAIERREKREEKVEFTFVGINKVEFVAAEMQKNEEFLTVRIVSEI 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IS +Y+K N I DPE ++ D+WTFVRN +PNW L +T+ G+
Sbjct: 183 ISVTYNKQNECIDGDPEAIVEIKDVWTFVRNSLSQDPNWKLFATEDGD 230
>gi|148251774|ref|YP_001236359.1| hypothetical protein BBta_0156 [Bradyrhizobium sp. BTAi1]
gi|146403947|gb|ABQ32453.1| hypothetical protein BBta_0156 [Bradyrhizobium sp. BTAi1]
Length = 233
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 10/231 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE----------RGI 59
D ++F + F+F++LR VLG++TG+E+ + V D
Sbjct: 2 DIYTIIFLALAVFIFVRLRAVLGQRTGSERTPFDRAARNAVQGAPDNHVMPVPGAPLDPA 61
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + D + GT L + + +V+ FDP+ FL AR++YE IV +F
Sbjct: 62 VATAGAEPGVPSDRWRGVAEPGTPLARGLDAVVANDPSFDPRHFLTGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G A+ L+ S VY F+ + R+ +E+ ++ V ID ++++A + + T +T+R
Sbjct: 122 NGDRRALRDLLSSEVYDSFDAVIKDREKHEQKTETRFVSIDTAELVSADLRDRTAQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
V Q IS + DK ++ +P+ + DIWTF R+ +PNW L+ T
Sbjct: 182 FVSQMISVTRDKMGNIVDGNPDKVADITDIWTFARDTGSRDPNWKLVGTGS 232
>gi|153008182|ref|YP_001369397.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
anthropi ATCC 49188]
gi|151560070|gb|ABS13568.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
anthropi ATCC 49188]
Length = 231
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 4/219 (1%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TG+EKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGSEKPPFDPYTSARSADAAPASGETDNVVSLPRRPGEKDFTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I++ P+GT +N MR I + FDP F+ + +YE IV SF +G ++ L+
Sbjct: 73 IDKAAPVGTPVNDGMRAIYAADPSFDPAGFVEGVKIAYEMIVMSFADGDRKVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
V++ F ++ R++ ++V+SS VGID +I A ++ + ++T+ IV Q IS+++DKD
Sbjct: 133 VFEGFVSAIDDRETRGESVRSSFVGIDKAEIAGAEMKGSEAHVTVNIVSQMISSTFDKDG 192
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
LI DPE ++ D+WTF R+ +PNW L++T+ +
Sbjct: 193 KLIDGDPENVLEIKDLWTFARDTRSRDPNWKLVATEAED 231
>gi|17988336|ref|NP_540970.1| transporter [Brucella melitensis bv. 1 str. 16M]
gi|17984111|gb|AAL53234.1| transporter [Brucella melitensis bv. 1 str. 16M]
Length = 216
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 22 FVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDSINEL 77
+FLQLR VLG++TGNEKP + S + +++L + + + +I+++
Sbjct: 2 IIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGGPDNVVSLPRRANEKDYTAIDKI 61
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+ VY+
Sbjct: 62 APAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKDVYEG 121
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
F ++ R+ + V+SS VGID I A ++ + ++T+ IV Q IS++ D+D +I
Sbjct: 122 FVAAIDEREKRGETVRSSFVGIDKAGIAGAEMKGSEAHVTVNIVSQMISSTLDRDGKVID 181
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
DP+ ++ D+WTF R+ +PNW L++T+ +
Sbjct: 182 GDPDNVVEIKDLWTFARDTNSRDPNWKLVATEAED 216
>gi|146337371|ref|YP_001202419.1| hypothetical protein BRADO0204 [Bradyrhizobium sp. ORS278]
gi|146190177|emb|CAL74169.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 233
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 10/231 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK- 68
D ++F + F+FL+LR VLG++TG+E+ + V + + +
Sbjct: 2 DIYTIIFLGLAVFIFLRLRSVLGQRTGSERTPFDRTARNAVGAPDNHVMPVPGAPLDPAG 61
Query: 69 ---------DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
D + GT L + + I + FDP+ FL AR++YE IV +F
Sbjct: 62 PSTGAADFGAPSDRWRGIAEPGTPLARGLDAIAANDASFDPRHFLTGARSAYEMIVLAFA 121
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G A+ L+ S VY F+ + R+ NE+ ++ V ID +++NA + T +T+R
Sbjct: 122 NGDRRALRDLLSSEVYDSFDAVIKDREKNEQKTETRFVSIDTAELVNAEARDRTAQLTVR 181
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
V Q IS + DK ++ +P+ + DIWTF R+ +PNW L+ T
Sbjct: 182 FVSQMISVTRDKTGNIVDGNPDKVADITDIWTFARDTGSRDPNWKLVGTGS 232
>gi|254780815|ref|YP_003065228.1| hypothetical protein CLIBASIA_03530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040492|gb|ACT57288.1| hypothetical protein CLIBASIA_03530 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 232
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII
Sbjct: 1 MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE
Sbjct: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI
Sbjct: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE
Sbjct: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
>gi|254500164|ref|ZP_05112315.1| Tim44-like domain family [Labrenzia alexandrii DFL-11]
gi|222436235|gb|EEE42914.1| Tim44-like domain family [Labrenzia alexandrii DFL-11]
Length = 245
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 126/230 (54%), Gaps = 17/230 (7%)
Query: 20 TFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD--ERGIITLGKGKKK--------- 68
F+ +LR VLGK+TG E+P +S + + + +I L ++
Sbjct: 16 AVFILFRLRSVLGKRTGEERPPFDPYSKPEQQNGQANGQDNVIPLPHQGQQSPEGYDDMA 75
Query: 69 ------DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
D I+++ P G+ LN ++ I+SV F+P+ F+ A+ +YE IV +F +G
Sbjct: 76 PARQEEDGEVVIDKVAPAGSALNNALKQILSVDRSFEPEPFIQGAKAAYEMIVMAFADGD 135
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
A++ L+ V++ F+ ++ R+ + ++S+ VGID +I+ A++++ T +T+RI
Sbjct: 136 KKALKNLLSRDVFEGFSAAIDDREKRGETIESTFVGIDKAEIVEAALKDTTAQVTVRIHS 195
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Q ISA+ DK ++ DP +VIDIWTF R+ +PNW L++T+ E
Sbjct: 196 QLISATRDKGGEVVDGDPAKVTEVIDIWTFARDTATRDPNWKLVATESAE 245
>gi|298293768|ref|YP_003695707.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
gi|296930279|gb|ADH91088.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
Length = 241
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF--SKRDERGIITLGKGK 66
D ++F + F+F++LR VLG++TG E+P +S + +++
Sbjct: 2 FDIYTIIFLALAVFIFIRLRSVLGQRTGRERPPYDPYSRRDPAKAPAGPADKVVSFPGAA 61
Query: 67 KKDNLDSINE--------------LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+K ++ E + +G+ + + I + FD + FL AR +YE
Sbjct: 62 EKPSVPEPAEATESDEPAPARWAGVAEVGSAVANGLDAIAAQERGFDAQHFLTGARAAYE 121
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
IV +F G A+++L+ V++ F+ +++ R+ + +++ VGI+ ++II A ++
Sbjct: 122 MIVVAFANGDRAALKELLAREVFEGFSAAIAEREQRGEKMETQFVGIEKVEIIEAGVKGR 181
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ +T+R + Q IS + DK +I DPE V D+WTF R + +PNW L++T+
Sbjct: 182 SAQMTLRFLSQLISVTRDKAGRVIDGDPEQVADVTDVWTFARELGTRDPNWKLVATEAA 240
>gi|154245991|ref|YP_001416949.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
gi|154160076|gb|ABS67292.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
Length = 250
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 11/234 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD-ERGIITLGKGKKK 68
D ++F + F+F++LR VLG++TG E+P +S + ++ L +
Sbjct: 17 DIYTIIFLALAVFIFVRLRSVLGQRTGRERPPYDPYSRDTARPPQPASDKVVPLPERPVS 76
Query: 69 DNLDSINELFPI----------GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
S + P G+ + +I + DFD + FL AR +YE IV +F
Sbjct: 77 PPAASPVDEAPPAYRWEGVAQEGSATAAALDEIARIEPDFDARHFLTGARAAYEMIVTAF 136
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
G A++ L+ VY F +++ R+S + ++S V ++ ++ + ++ + + +T+
Sbjct: 137 AAGDRRALKDLLAKDVYDGFVSAIADRESRRETMESRFVAVEQAELQDVTVRDRSAQLTV 196
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
R V + IS + D ++ P+ V D+WTF R++ +PNW L++T+ +
Sbjct: 197 RFVSKLISVTRGPDGAVVDGSPDTVADVTDVWTFARDLGTRDPNWKLVATEAAQ 250
>gi|49473777|ref|YP_031819.1| hypothetical protein BQ00970 [Bartonella quintana str. Toulouse]
gi|49239280|emb|CAF25603.1| hypothetical protein BQ00970 [Bartonella quintana str. Toulouse]
Length = 230
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 4/225 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGK----YVFSKRDERGIITLGK 64
+ +++L I VF+QLR VLGK+ G EKP +SG+ D
Sbjct: 3 FNIVLVLALVIMVVVFVQLRNVLGKRIGFEKPPFDPYSGRSKKQTETETADNIVSFPHQG 62
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+K++ I+ + P G+ LN+ +R + F P+ F+ A+ +YE IV +F +G
Sbjct: 63 NSQKNDFSEIDAISPKGSALNEGLRALRQSDPHFSPQFFIKGAQVAYEMIVTAFAKGDRD 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
++KL+ V++ F ++ R+ N + V+ + VGI+ ++ + A++++N ++T+RIV +
Sbjct: 123 QLKKLLSQNVFESFCAAIEQREKNNERVQFTFVGINKIEFVAAAMQDNEEFLTVRIVSEM 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
ISA+Y++ LI DP+ ++ D+WTFV N S+PNW L +T+
Sbjct: 183 ISATYNEQEELIDGDPDAIVEIRDVWTFVHNSLSSDPNWKLFATE 227
>gi|49474924|ref|YP_032965.1| hypothetical protein BH01040 [Bartonella henselae str. Houston-1]
gi|49237729|emb|CAF26919.1| hypothetical protein BH01040 [Bartonella henselae str. Houston-1]
Length = 230
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY----VFSKRDERGIITLGK 64
D +++L I VF+QLR VLGK+ G EKP +S + D ++
Sbjct: 3 FDIVLVLALVIMVVVFMQLRNVLGKRIGFEKPPFDPYSSRSKKQIETETADNNASLSHQV 62
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+K++ I+ + P G+ LNK +R + F P+ F+ A+ +YE IV +F +G +
Sbjct: 63 NSQKNDFSEIDAIAPEGSELNKGLRALHQNDPHFSPQFFIKGAQVAYEMIVTAFAKGDRN 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
+ +L+ V++ F+ ++ R+ N + V+ + VGI+ ++ + A+++E ++TIRIV +
Sbjct: 123 QLRRLLSQDVFESFDAAIEQREKNNERVQFTFVGINKIEFVAAAMQEKEEFLTIRIVSEM 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
ISA+Y++ I DP+ ++ DIWTFVRN ++PNW L +T+ +
Sbjct: 183 ISATYNEQGERIDGDPDTIVEIRDIWTFVRNSLSTDPNWKLFATEDED 230
>gi|254486605|ref|ZP_05099810.1| transporter, Tim44 family [Roseobacter sp. GAI101]
gi|214043474|gb|EEB84112.1| transporter, Tim44 family [Roseobacter sp. GAI101]
Length = 219
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 10/226 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EK K + G
Sbjct: 1 MNSPMIQLLVLAGIAVFLILRLKNVLGTREGFEKKP----EIDAKPQKPSGPAFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D P G+ + ++ V F DFL AR +YE IV F G +
Sbjct: 57 PDLDITDH----APEGSDTALALAEMKRVEPSFGVSDFLGGARGAYEMIVMGFEHGNLDD 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + ++ F D ++ R+ V+S+ +GI +M++ NA++++ T +TIR V +
Sbjct: 113 IKPFLSEDIFDSFVDGIAAREDQGLTVESTFIGIREMELENATMDKATKEAELTIRFVAE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
S DKD ++I P + D W F R + +PNW+L+ST
Sbjct: 173 MTSVVKDKDGMVIEGSPTEVKRQKDTWVFARVMGSDDPNWLLVSTD 218
>gi|83942018|ref|ZP_00954480.1| transporter, Tim44 family protein [Sulfitobacter sp. EE-36]
gi|83953067|ref|ZP_00961789.1| transporter, Tim44 family protein [Sulfitobacter sp. NAS-14.1]
gi|83842035|gb|EAP81203.1| transporter, Tim44 family protein [Sulfitobacter sp. NAS-14.1]
gi|83847838|gb|EAP85713.1| transporter, Tim44 family protein [Sulfitobacter sp. EE-36]
Length = 219
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 10/226 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG +TG EKP + + G
Sbjct: 1 MNSPMIQLLVLAAIAVFLILRLKNVLGTRTGFEKP----AEVSEKPERPSGPAFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D P G+ + ++ V F DFL AR +YE IV + G +
Sbjct: 57 PDLDITDH----APEGSDTALALAEMKRVEPSFGVSDFLGGARGAYEMIVMGYEHGNLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I+ + +Y+ F + ++ R+ V+S +GI +M++ NA++++ N +TIR V +
Sbjct: 113 IKPFLSEDIYESFVEGVAAREDQGLTVESHFIGIREMELENATMDKTTNEAELTIRFVAE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
S D+D ++ + D W F R + +PNW+L+ST
Sbjct: 173 LTSVVKDRDGEIVEGSTTEVNRQKDTWVFARVMGSDDPNWLLVSTD 218
>gi|260431955|ref|ZP_05785926.1| transporter, Tim44 family [Silicibacter lacuscaerulensis ITI-1157]
gi|260415783|gb|EEX09042.1| transporter, Tim44 family [Silicibacter lacuscaerulensis ITI-1157]
Length = 219
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 10/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + + + R + G
Sbjct: 1 MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKPPVP----QQPAASKSRRDFEVIDGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D D + P + + + + + V F +FL AR++YE IV F G +
Sbjct: 57 PDRDITDHV----PEDSEIAQTLAAMKRVEPSFSVSEFLQGARSAYEMIVMGFERGNLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + V++ F ++ R+ ++++ +G+ +M +++A +++T IT+R VG+
Sbjct: 113 IQPFLSEEVFETFVSVVAEREDKGLSIEAEFIGVREMALVDAQFDKDTNRAEITVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S D+D ++ +P + D WTF R + +PNW+L++T
Sbjct: 173 LTSVVRDRDGNIVEGNPNTIKRQKDSWTFARVMGADDPNWLLVATDA 219
>gi|170739669|ref|YP_001768324.1| import inner membrane translocase subunit Tim44 [Methylobacterium
sp. 4-46]
gi|168193943|gb|ACA15890.1| import inner membrane translocase subunit Tim44 [Methylobacterium
sp. 4-46]
Length = 238
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFF--SGKYVFSKRDERGIITLG 63
DS D L+F + FV +LR VLG+KTG+E+P + E ++ L
Sbjct: 3 QDSLDLTTLIFLGLAVFVIWKLRAVLGQKTGHERPPFNPLVRRREEPPPAAREDNVVRLP 62
Query: 64 KGKKKDNLDSIN-------ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
G + + + + + + ++ FDP+ F + A+ +YE IV
Sbjct: 63 AGGDRTAAAPVATVPRNWKGVVEPNSAAARGLDLVLQQEPGFDPRAFTDGAKIAYETIVM 122
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F +G ++ L+ V + F ++ R+ ++V+++ V ID +I+ + I
Sbjct: 123 AFAKGDRRTLKSLLSREVAEGFERAIQARERAGQSVETTFVSIDRAEIVGVDLRNRVAQI 182
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
T+R + + I+A+ + ++ P+ V D+WTF R + +PNW L++T+ G+
Sbjct: 183 TVRYLSKLITATRNAQGAVVDGSPDTVVDVTDVWTFARTLGSRDPNWQLVATEAGQ 238
>gi|240849776|ref|YP_002971164.1| putative translocase transmembrane protein [Bartonella grahamii
as4aup]
gi|240266899|gb|ACS50487.1| putative translocase transmembrane protein [Bartonella grahamii
as4aup]
Length = 230
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 128/225 (56%), Gaps = 4/225 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY----VFSKRDERGIITLGK 64
D ++++ + +F+QLR VLGK+ G EKP +S + D K
Sbjct: 3 FDVILVIALVVMVVIFVQLRNVLGKRIGFEKPPFDPYSRRSKKQVEAETADNIVSFPHQK 62
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+KD+ I+++ P G+ LNK +R++ + F P+ F+ A+ +YE IV +F +G +
Sbjct: 63 NSQKDDFSEIDKISPEGSILNKNLRELHKIDPQFSPQFFIKGAQIAYEMIVTAFAKGDRN 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
++ L+ V++ F ++ R+ N++ ++ + VGI+ ++ + A+I+E +TIRIV +
Sbjct: 123 QLKSLLCQDVFESFCTAIEQREKNKERIEFTFVGINKIEFVAAAIQEKDELLTIRIVSEM 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IS +Y++ I DP+ ++ DIWTFVRN S+PNW L +T+
Sbjct: 183 ISVTYNEQGERIDGDPDAIVEIRDIWTFVRNSLSSDPNWKLFATE 227
>gi|159184122|ref|NP_353048.2| hypothetical protein Atu0008 [Agrobacterium tumefaciens str. C58]
gi|159139459|gb|AAK85833.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 217
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 84/215 (39%), Positives = 127/215 (59%), Gaps = 5/215 (2%)
Query: 23 VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKR--DERGIITLG---KGKKKDNLDSINEL 77
+F QLR VLG++TGNEKP +S + V D+ ++TL + ++ + + L
Sbjct: 3 IFFQLRSVLGRRTGNEKPPFDPYSPRDVAKGPVADDNKVVTLPKRGEAEEDNRFAEADAL 62
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
P T LN +RD+++ F PK+FLN AR +YE IV F +G ++ L+ V+
Sbjct: 63 APADTPLNASLRDVMTKDPSFRPKEFLNGARMAYEMIVMGFADGDRKTLKNLLSKEVFDG 122
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
F ++S R+S + VKS+ VGI+ I A + ++ V +T+RIV Q ISA+YDKD L+
Sbjct: 123 FEAAISERESRGEVVKSTFVGIEKADITQAGVRDSEVQVTLRIVSQLISATYDKDGKLVD 182
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
DPE +V DIWTF R+I +PNW LI+T+ +
Sbjct: 183 GDPEAVAEVDDIWTFSRDIRSRDPNWKLIATESEQ 217
>gi|220921009|ref|YP_002496310.1| import inner membrane translocase subunit Tim44 [Methylobacterium
nodulans ORS 2060]
gi|219945615|gb|ACL56007.1| import inner membrane translocase subunit Tim44 [Methylobacterium
nodulans ORS 2060]
Length = 241
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGK----YVFSKRDERGIIT 61
DS D L+F + FV +LR VLG+KTGNE+P + + ++
Sbjct: 2 QDSLDLTTLIFLGLAVFVIWKLRSVLGQKTGNERPPFNPLLRRREEPPPAPREGGDNVVR 61
Query: 62 LGKGKKKDNL---------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
L + + + + + ++ FDP+ F + A+ +YE
Sbjct: 62 LPGAGADRGAAAPVAATVPRNWKGVVEPNSPAARGLDLVLQQEPSFDPRAFTDGAKVAYE 121
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
IV +F +G ++ L+ V F ++ R+ + V+++ V ID +I+ +
Sbjct: 122 TIVMAFAKGDRKTLKSLLSREVADGFERAIQARERAGQTVETTFVSIDRAEIVGVDVRNR 181
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IT+R + + I+A+ + ++ P+ V D+WTF R + +PNW L++T+ G+
Sbjct: 182 VAQITVRFLSKLITATRNPQGAVVDGSPDTVVDVTDVWTFARTLGSRDPNWQLVATEAGQ 241
>gi|254450565|ref|ZP_05064002.1| transporter, Tim44 family [Octadecabacter antarcticus 238]
gi|198264971|gb|EDY89241.1| transporter, Tim44 family [Octadecabacter antarcticus 238]
Length = 224
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
Query: 1 MVFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
M M+S +L+ A I F+ L+LR VLG + G EKP + + ++R +
Sbjct: 1 MKETHMNSPVLQLLVLAGIAIFLILRLRNVLGTREGFEKPKAPPA----IPTRRFGPDLE 56
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ G D D ++ + + K + + + F+ ++FL AR +YE I+ F +
Sbjct: 57 VIEGGPDPDVTDYVD----ADSDMAKALTAMKTADRSFNVREFLRGARGAYEMILTGFEK 112
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITI 178
G + I+ + S VY F + +R+ + ++ +GI + +++A +E T ITI
Sbjct: 113 GDLAEIKPFLSSDVYDAFAGVVESREKDGLSIDFKFIGISETTLVDAEFDETTKNAEITI 172
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + + SA YD L P K D+WTF R + +PNW L++T
Sbjct: 173 KFLNESTSAVYDNGGDLKEGSPTEIKKQRDVWTFGRTMGTGDPNWFLVAT 222
>gi|84501205|ref|ZP_00999410.1| transporter, Tim44 family protein [Oceanicola batsensis HTCC2597]
gi|84390496|gb|EAQ02984.1| transporter, Tim44 family protein [Oceanicola batsensis HTCC2597]
Length = 220
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 9/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EK + + + G
Sbjct: 1 MNSPIIQLLVLAGIAVFLILRLRSVLGTREGFEKTP---VTRSGPSNSEARGNFEVIEGG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + P + + + + F +FL AR +YE I+ F G++
Sbjct: 58 PDPDIVDHV----PEDSPAAGALARMKQLEPSFSVGEFLGGARGAYEMILMGFERGEMAE 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I+ + VY+ F ++ R + +++ VG+ ++++++A +++ +T+R VGQ
Sbjct: 114 IKPFLSEEVYESFAHVVNERDAKGLTIEADFVGVKELQLVDAELDDTSREGELTVRFVGQ 173
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
A D+ +I DP+ D+WTF R + +PNW L++T
Sbjct: 174 LTFAVRDRAGEVIEGDPKSIKTQRDVWTFARKMGSDDPNWQLVAT 218
>gi|114762187|ref|ZP_01441655.1| transporter, Tim44 family protein [Pelagibaca bermudensis HTCC2601]
gi|114545211|gb|EAU48214.1| transporter, Tim44 family protein [Roseovarius sp. HTCC2601]
Length = 219
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 10/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M++ +L+ A I F+ L+LR VLG + G EKP S S + + R + G
Sbjct: 1 MNTPIVQLLVLAGIAIFLILRLRSVLGTRDGFEKPESPSPSRRDDTA----RDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + E P + + + F +FL+ AR +YE I+ F G++
Sbjct: 57 PDHDIIDHVPENSPA----AEALAKMKRAEPSFGVGEFLSGARGAYEMILMGFDNGEIED 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
++ + +Y+ F+D + R +++ VG+ ++ +++A+ ++ IT++ VG+
Sbjct: 113 LKPFLSDEIYETFSDVIEQRAQQGLTIEAQFVGVRELSLVDATFDDTERLAEITVKYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S + +I P + D+WT+ R + +PNW L++T
Sbjct: 173 LTSVVKNAAGEVIEGSPTAVKRQKDVWTYARRMGSDDPNWQLVATDE 219
>gi|260429391|ref|ZP_05783368.1| transporter, Tim44 family [Citreicella sp. SE45]
gi|260420014|gb|EEX13267.1| transporter, Tim44 family [Citreicella sp. SE45]
Length = 219
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M++ +L+ A I F+ L+LR VLG + G EKP + + + +R + G
Sbjct: 1 MNTPIVQLLVLAGIAIFLILRLRSVLGTRDGFEKPEAPAPAKRDD----RKRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + E P + + + + F+ +FL+ AR +YE I+ F G++
Sbjct: 57 PDHDITDHVPENSPA----AEALAKMKRIEPSFNVTEFLSGARGAYEMILMGFDNGEIED 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
++ + +Y+ F+D + R V++ VG+ ++ +++AS +E IT++ VG+
Sbjct: 113 LKPFLSDEIYETFSDVIEQRGQQGLTVEAEFVGVRELSLVDASFDETRQLAEITVKYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S + ++ +P + D+WT+ RN+ +PNW L++T
Sbjct: 173 LTSVVKNAAGEIVEGNPRTVKRQKDVWTYARNMGTDDPNWQLVATDE 219
>gi|126463660|ref|YP_001044774.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17029]
gi|332559713|ref|ZP_08414035.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides WS8N]
gi|126105324|gb|ABN78002.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17029]
gi|332277425|gb|EGJ22740.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides WS8N]
Length = 219
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPAVPL----EDPKPRTRRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLTGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I + V++ F +++ R++ +V+++ +G+ ++ I AS + +T + +R VG+
Sbjct: 113 IRPFLSPDVFESFEEAVKAREAEGLSVEATFLGLREIDIHEASFDRDTRVGQVAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + ++PNW L++T
Sbjct: 173 LTSVVRDRTGQVIEGSPTEVKRQRDVWTFERRMGANDPNWQLVAT 217
>gi|163745120|ref|ZP_02152480.1| hypothetical protein OIHEL45_06015 [Oceanibulbus indolifex HEL-45]
gi|161381938|gb|EDQ06347.1| hypothetical protein OIHEL45_06015 [Oceanibulbus indolifex HEL-45]
Length = 219
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP S R + G
Sbjct: 1 MNSPLIQLLVLAGIAVFLILRLKNVLGTREGFEKPPV----SDQTPSARSGPSFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + P + K + ++ V F DFL AR +YE IV + G +
Sbjct: 57 PDLDITDHV----PEDSTSGKALAEMKRVEPSFGVNDFLQGARGAYEMIVMGYERGDLAE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + VY+ F D ++ R+ ++++ +G+ ++++I+A ++E T +TIR VG+
Sbjct: 113 IQPFLAEDVYESFVDGVAAREDQGLTIEANFIGVRELELIDARMDEATKEAELTIRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
SA +++ ++ + D W F R + +PNW+L+ST
Sbjct: 173 LTSAVRNREGEIVEGSINEIKRQKDTWVFARVMGSDDPNWLLVSTD 218
>gi|163867402|ref|YP_001608597.1| hypothetical protein Btr_0112 [Bartonella tribocorum CIP 105476]
gi|161017044|emb|CAK00602.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 230
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 126/225 (56%), Gaps = 4/225 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY--VFSKRDERGIITLGKGK 66
D ++++ + +F+QLR VLGK+ G EKP +S + I++ K
Sbjct: 3 FDVILVIALVVMVVIFVQLRSVLGKRIGFEKPPFDPYSRRSKKQTEAETTENIVSFPHQK 62
Query: 67 --KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+K + I+E+ P G+ LN+ +R + + F P+ F+ A+ +YE IV +F +G
Sbjct: 63 NLQKGDFSEIDEIAPEGSILNENLRALRRIDPHFSPQSFIKGAQIAYEMIVTAFAKGDRS 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
++ L+ V++ F + R+ N++ ++ + VGI+ ++ ++A+I+E +TIRI+ +
Sbjct: 123 QLKSLLCQDVFESFCAVIEQREKNKERIEFTFVGINKIEFVSAAIQEKDELLTIRIISEM 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IS +Y++ I +P+ ++ DIWTFVRN +PNW L +T+
Sbjct: 183 ISVTYNEQGERIDGNPDAIVEIRDIWTFVRNSLSPDPNWKLFATE 227
>gi|56698697|ref|YP_169074.1| Tim44 family protein [Ruegeria pomeroyi DSS-3]
gi|56680434|gb|AAV97100.1| transporter, Tim44 family [Ruegeria pomeroyi DSS-3]
Length = 218
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP R R + G
Sbjct: 1 MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKPPVPQ-----QPENRTRRDFEVIEGG 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D D + P + + + + + F +F+ AR +YE IV F G +
Sbjct: 56 PDRDITDHV----PEDSPQAQALAAMKRIEPAFSVSEFVQGARGAYEMIVMGFERGNLDE 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
IE + V++ F ++ R+ +++ +G+ + I + ++ N IT+R VG+
Sbjct: 112 IEPFLTEEVFETFVGVVAAREDQGLTIEAEFIGVRETSIQDVHFDKDSNRGEITMRFVGE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S D+ +I P + D+WTF R + +PNW+L++T
Sbjct: 172 LTSVVRDRGGDVIEGSPTAVKRQKDVWTFARVMGTDDPNWLLVATDA 218
>gi|146278709|ref|YP_001168868.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17025]
gi|145556950|gb|ABP71563.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
sphaeroides ATCC 17025]
Length = 219
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP + R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPPVPLEDPR----PRPRREFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLTGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI--EENTVYITIRIVGQ 183
I + + V++ F D+++ R++ +V+++ +G+ ++ I AS + I +R VG+
Sbjct: 113 IRPFLSAEVFESFEDAVNAREAEGLSVEANFLGLREIDIHEASFERDSRIGQIAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S +++ ++ P + D+WTF R++ ++PNW L++T
Sbjct: 173 LTSVVRNREGQVVEGSPTEIKRQRDVWTFERHMGANDPNWQLVAT 217
>gi|126738514|ref|ZP_01754219.1| transporter, Tim44 family protein [Roseobacter sp. SK209-2-6]
gi|126720313|gb|EBA17019.1| transporter, Tim44 family protein [Roseobacter sp. SK209-2-6]
Length = 241
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 2 VFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIIT 61
+ M+S +L+ A I F+ L+L+ VLG + G EKP + +
Sbjct: 20 REVLMESPLIQLLVLAGIAVFLILRLKSVLGTREGFEKPPVSAAEKRQGRP-----DLEV 74
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ G +D D + E P + + F +F+ AR +YE I+ F G
Sbjct: 75 IEGGPDRDITDHVEEESPA----AQAFASMKRAEPSFSVSEFVQGARGAYEMILMGFENG 130
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIR 179
++ A++ + VY F ++++ R+ +++ +G+ + ++ A ++ NT +T+R
Sbjct: 131 ELDALKGFLAEDVYDSFVEAVADREDKGLTIEAEFIGVRETAVVGAHFDDANNTAEVTMR 190
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
VG+ S D+D ++ D + + D W F R++ +PNW L++T
Sbjct: 191 FVGELTSVVRDRDGEIVEGDAKAVKRQKDTWVFARSMGTDDPNWQLVATD 240
>gi|255263169|ref|ZP_05342511.1| transporter, Tim44 family [Thalassiobium sp. R2A62]
gi|255105504|gb|EET48178.1| transporter, Tim44 family [Thalassiobium sp. R2A62]
Length = 219
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP + + R + G
Sbjct: 1 MNSPIIQLLVLAGIAIFLILRLRNVLGTREGFEKPP----AQQSSAPDRALSDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + P G + + V F+ +FL AR +YE I+ +F G++
Sbjct: 57 PDHDITDHV----PEGGDAYNALLGMKKVDPSFNVGEFLGGARGAYEMILMAFERGEIEE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + S VY+ F + RK+ ++++ VGI DM + A E T I +R VG+
Sbjct: 113 IKPFLSSDVYEAFATVVDDRKAKGVTIEANFVGISDMALNAADFNETTGEAEIAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S DK +I + D WTF R++ +PNW L++T
Sbjct: 173 MTSIVRDKGGDVIEGSETTVKRQKDTWTFARDMDADDPNWDLVAT 217
>gi|221640736|ref|YP_002526998.1| Import inner membrane translocase subunit Tim44 [Rhodobacter
sphaeroides KD131]
gi|221161517|gb|ACM02497.1| Import inner membrane translocase, subunit Tim44 precursor
[Rhodobacter sphaeroides KD131]
Length = 219
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPAVPL----EDPKPRTRRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLIGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I + V++ F +++ R++ +V+++ +G+ ++ I AS + +T + +R VG+
Sbjct: 113 IRPFLSPDVFESFEEAVKAREAEGLSVEATFLGLREIDIHEASFDRDTRVGQVAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + ++PNW L++T
Sbjct: 173 LTSVVRDRTGQVIEGSPTEVKRQRDVWTFERRMGANDPNWQLVAT 217
>gi|77464817|ref|YP_354321.1| hypothetical protein RSP_1239 [Rhodobacter sphaeroides 2.4.1]
gi|77389235|gb|ABA80420.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 219
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +L+ A I F+ ++L+ VLG + G EKP R R + G
Sbjct: 1 MSSSLIQLLVLAGIAVFLIIKLKSVLGTREGFEKPAVPL----EDPKPRTRRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D + + G+ K + + F +FL AR +YE IV +F +G++
Sbjct: 57 PDRDIIDHVTD----GSPSAKALAGMKMAEPGFSVSEFLTGARGAYEMIVMAFEKGELEQ 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I + S V++ F +++ R++ +V+++ +G+ ++ I AS + +T + +R VG+
Sbjct: 113 IRPFLSSDVFESFEEAVKAREAEGLSVEATFLGLREIDIHEASFDRDTRVGQVAVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D+ +I P + D+WTF R + ++PNW L++T
Sbjct: 173 LTSVVRDRTGQVIEGSPTEVKRQRDVWTFERRMGANDPNWQLVAT 217
>gi|83313642|ref|YP_423906.1| hypothetical protein amb4543 [Magnetospirillum magneticum AMB-1]
gi|82948483|dbj|BAE53347.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 281
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+ FA + F+ L+LR VLGK+TG E+P ++ + ++ L ++ +
Sbjct: 72 IVFFAMVAAFLVLRLRSVLGKRTGAERPPE-----QWTPPEAAADNVVDLQSVRRSASEP 126
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
P T + + + I + FD FL A+ ++E IV +F G ++ L+
Sbjct: 127 ------PAETPMGQGLAAIRAADRGFDLDGFLGGAKAAFEMIVIAFAHGDKATLQPLLAP 180
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY+ F+D++ R+ + + +++ LVGI +++ A ++ +TIR V + ++A D
Sbjct: 181 DVYRHFSDAIDARRQHGETLQTELVGIRTAELVEAGMDGRFAALTIRFVSEQVNALRDAK 240
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ +PE VID+WTF R+ ++PNW L +T E
Sbjct: 241 GEVVEGNPERVIDVIDLWTFRRDTRSADPNWALAATHTPE 280
>gi|254472289|ref|ZP_05085689.1| import inner membrane translocase, subunit Tim44 [Pseudovibrio sp.
JE062]
gi|211958572|gb|EEA93772.1| import inner membrane translocase, subunit Tim44 [Pseudovibrio sp.
JE062]
Length = 248
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 21/244 (8%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKY------VFSKRDERGIITL 62
D ++F +FL+LR VLG +TGNE+ +S + + +E +I L
Sbjct: 5 FDVYNIIFLIAAVVIFLRLRSVLGNRTGNERQPFDPYSAQQKQDSQKTQAPENEDNVIPL 64
Query: 63 GKGK-------------KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARN 109
+ ++ I+++ GT LN +R+I F+PK+F+ AR
Sbjct: 65 PGSEHVHHDPERAEREAREQIEAEIDKVAKKGTDLNHGLREIWKAEPSFNPKEFVEGARG 124
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+YE I+ SF +G ++ L+ V+ F+ ++ R+S + V+S+ VGID I+ A
Sbjct: 125 AYEIILMSFAQGDRRTLKDLLSPEVFTGFSAAIDDRESRNERVESTFVGIDKADIVEAVF 184
Query: 170 --EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+++ +T+R Q I+A+ D +N ++ DP ++ DIWTF R ++PNW L++
Sbjct: 185 NQKDSLAEVTVRFKSQLITATRDSENRIVDGDPTAVSELTDIWTFARVTGVNDPNWKLVA 244
Query: 228 TKLG 231
T+
Sbjct: 245 TESA 248
>gi|126724535|ref|ZP_01740378.1| import inner membrane translocase, subunit Tim44 [Rhodobacterales
bacterium HTCC2150]
gi|126705699|gb|EBA04789.1| import inner membrane translocase, subunit Tim44 [Rhodobacterales
bacterium HTCC2150]
Length = 236
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query: 2 VFIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIIT 61
F KM S +L+ A I F+ L+L+ VLG + G EKP + G+ S R + ++
Sbjct: 14 RFTKMGSSMIQLLVLAGIAVFLILRLKNVLGTREGFEKPRAP--QGQAQQSNRPQLEVVE 71
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
G + I E I + + +I + +F ++FL A+ +YE I+ +F G
Sbjct: 72 NGPDQD------IAEYVEIDSEAGMALAEIKAQDRNFTVQEFLGGAKGAYEMILIAFEGG 125
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIR 179
K+ +E + V + F + ++ R+ V ++ +G+ +M + +A+++ N +T++
Sbjct: 126 KLSDVEPFLSEEVMESFVEVVADREDQGLTVTANFIGLREMAVHDATLDPITNIAEVTVK 185
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
VG+ S ++ + ++ D + + DIWTF R++ NPNW L++T
Sbjct: 186 FVGEMTSVVHNAEGEVVEGDEKTIKRQKDIWTFARDLGDDNPNWQLVAT 234
>gi|126730112|ref|ZP_01745924.1| transporter, Tim44 family protein [Sagittula stellata E-37]
gi|126709492|gb|EBA08546.1| transporter, Tim44 family protein [Sagittula stellata E-37]
Length = 219
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 10/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + +L+ A I F+ L+LR VLG + G E+P + R + G
Sbjct: 1 MQNPLLQLLVLAGIAVFLVLRLRSVLGTRDGFERP----TPAEKSKETTSRREFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + E GT + + V F +FL AR +YE I+ F G +
Sbjct: 57 PDHDITDHVAE----GTDAANALAAMKRVEPSFSVSEFLGGARGAYEMILMGFERGDIEG 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
++ + V++ F++ + R+S + + VG+ +M + AS + +T IT+R VG+
Sbjct: 113 LKPFLADDVFETFSEVVEARESEGLTIDADFVGVREMTLAGASFDPDTREAEITVRYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S + + ++ P + DIWT+ R + +PNW L++T
Sbjct: 173 LTSVVKNAEGEIVEGSPTAVKRQKDIWTYARTMGADDPNWQLVATDE 219
>gi|114706069|ref|ZP_01438972.1| Calcium-binding EF-hand [Fulvimarina pelagi HTCC2506]
gi|114538915|gb|EAU42036.1| Calcium-binding EF-hand [Fulvimarina pelagi HTCC2506]
Length = 229
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 15/229 (6%)
Query: 19 ITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF------SKRDERGIITLGKGKKKDN-- 70
+ V QL VLG++TGNE+P ++ ++TL + D
Sbjct: 1 MAAIVLFQLYNVLGRRTGNERPPFDPYTRNRSRDRSGESEDAAGDNVVTLPNRRANDRNE 60
Query: 71 -------LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
I+ + GT LNK +R I +FDPK+FL A+ +YE +VD+F +G
Sbjct: 61 DVPAGVRYAEIDRVSETGTPLNKELRKIKDADPNFDPKEFLEGAKIAYEMVVDAFAQGDR 120
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
+ + L+ VY+ F +++TR+ + + ++SS +GIDD KI++A + +TIRIV +
Sbjct: 121 NTLRNLLSPDVYEGFEAAIATREESGETMRSSFIGIDDAKIVSAELRGREALVTIRIVSE 180
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
ISA+ + + ++ D E +V DIWTF R+ +PNW L+ T+ E
Sbjct: 181 MISATLNSNGDVLDGDMETVVEVRDIWTFGRDTKSRDPNWKLVGTESEE 229
>gi|149912880|ref|ZP_01901414.1| transporter, Tim44 family protein [Roseobacter sp. AzwK-3b]
gi|149813286|gb|EDM73112.1| transporter, Tim44 family protein [Roseobacter sp. AzwK-3b]
Length = 219
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E P +G + + G
Sbjct: 1 MNSPLLQLLVLAGIAIFLILRLKSVLGTRDGFEGPPRSERAGAT---PQRRDTFEVIEGG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D++++ G+ + + + F+ FL AR +YE I+ +F G++
Sbjct: 58 PDYDIIDNVSD----GSDAADALARMKRIEPSFNVTQFLQGARGAYEMILMAFERGQLED 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI-EENTVYITIRIVGQF 184
+ +D VY+ F + R+ V++ +G+ + K+ A++ ++N IT+R VG+
Sbjct: 114 VAPFLDEDVYEAFAQVIDARQEQGLIVEAEFLGLRETKLAEATLSDDNRAAITVRFVGEL 173
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D + ++ D + + DIWTF R + +PNW L++T
Sbjct: 174 TSIVRDANGEIVEGDAKTAKRQKDIWTFERVMGSDDPNWRLVAT 217
>gi|89067415|ref|ZP_01154928.1| transporter, Tim44 family protein [Oceanicola granulosus HTCC2516]
gi|89046984|gb|EAR53038.1| transporter, Tim44 family protein [Oceanicola granulosus HTCC2516]
Length = 220
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP + + D + + G
Sbjct: 1 MNSPIIQLLVLAGIAVFLILRLRSVLGTREGFEKPPVTESDRSALRRRPD---LEVIEGG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D +D ++ G+ + + F DFL AR +YE I+ +F G +
Sbjct: 58 PDRDIVDHVD----AGSDAADALARMKRAEPAFGVGDFLGGARGAYEMILMAFENGDLSE 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
++ + VY+ F+ + R+ +V+++ VG+ ++ + +A +E T +T+R G+
Sbjct: 114 VKDFLGPEVYEAFSQVIEERRERGLHVEATFVGLSEITLKDAEFDETTREAELTVRFTGE 173
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D ++ P + D+WTF R + ++PNW+L++T
Sbjct: 174 ITSVVRDAGGDIVEGSPTEIKRQRDVWTFARTMGANDPNWILVAT 218
>gi|254460692|ref|ZP_05074108.1| import inner membrane translocase, subunit Tim44 [Rhodobacterales
bacterium HTCC2083]
gi|206677281|gb|EDZ41768.1| import inner membrane translocase, subunit Tim44 [Rhodobacteraceae
bacterium HTCC2083]
Length = 217
Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 12/225 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E+P + V S R + G
Sbjct: 1 MNSPIIQLLVLAGIAVFLILRLKNVLGTREGFEQPPA------QVPSGRKRPEFEVIEGG 54
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + + + + + + F DFL AR +YE I+ F G++
Sbjct: 55 PDPDIADHTDGMPEA----AEALAKMKAAEPSFGVSDFLGGARGAYEMILIGFERGEMAD 110
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I+ +D VY F + + R V++ VGI +M + +A+ ++ ++++ +G+
Sbjct: 111 IKPFLDDDVYASFAEVVEMRAKQGLTVEAEFVGIREMSLADATFDDENGIGEVSVKFIGE 170
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D ++ D + + DIWTF R + +PNW L++T
Sbjct: 171 MTSVVRDNAGEIVEGDAKKVKRQKDIWTFARKMGSDDPNWQLVAT 215
>gi|190889648|ref|YP_001976190.1| translocase transmembrane protein [Rhizobium etli CIAT 652]
gi|190694927|gb|ACE89012.1| putative translocase transmembrane protein [Rhizobium etli CIAT
652]
Length = 233
Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP + + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYQPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + +D +I+ + GT LN+ +R + F PK+FLN AR +YE IV ++
Sbjct: 61 RRDATAEDEDRFSAIDAVAAPGTPLNESLRALNKADASFTPKEFLNGARMAYEMIVMAYA 120
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+G ++ L+ VY F+ ++ R++ + VKS+ VGID +I +A + IT+R
Sbjct: 121 DGDRKTLKNLLSREVYDGFDAAIGEREARGEKVKSTFVGIDKAEITHAETKGTEAQITVR 180
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
IV Q ISA+YDK ++LI D E +V D+WTF P + ++G
Sbjct: 181 IVSQLISATYDKADVLIEGDAENVAEVNDLWTFAPRYPLARSELETCGDRIG 232
>gi|254512041|ref|ZP_05124108.1| transporter, Tim44 family [Rhodobacteraceae bacterium KLH11]
gi|221535752|gb|EEE38740.1| transporter, Tim44 family [Rhodobacteraceae bacterium KLH11]
Length = 219
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 10/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + + R + G
Sbjct: 1 MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKPP----LQQQRDTNDARRDFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + E + + + + V F +F+ AR +YE IV F +G +
Sbjct: 57 PDHDITDHVAE----DSEQAETLTAMKRVEPSFSVSEFVQGARGAYEMIVMGFEKGNLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + V+ F ++ R+ +++ +G+ + + + +++T IT+R +G+
Sbjct: 113 IQPFLSEEVFDTFVSVVADREDKGLTIEAEFIGVRETTLADVKFDKDTNQAEITMRFIGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S D+ +I +P + D WTF R + +PNW+L++T
Sbjct: 173 LTSVVRDRGGDIIEGNPNTVKRQKDSWTFARVMGLDDPNWLLVATDA 219
>gi|90420989|ref|ZP_01228893.1| conserved hypothetical protein, Tim44 domain [Aurantimonas
manganoxydans SI85-9A1]
gi|90334767|gb|EAS48543.1| conserved hypothetical protein, Tim44 domain [Aurantimonas
manganoxydans SI85-9A1]
Length = 238
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 13/235 (5%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFS--KRDERGIITLG----- 63
F + F + V QLR VLGK+TGNE+P +S + ++TL
Sbjct: 3 FGTIFFIIVAAIVLFQLRSVLGKRTGNERPPFDPYSRRDAPRDDAARNDNVVTLPNRRGG 62
Query: 64 ------KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
++I+++ GT +N +R I FDPK+FL+ A+ +YE IV +
Sbjct: 63 TEIEGEAAPAATPYEAIDKVAKPGTPVNAELRRIRDADPSFDPKEFLDGAKVAYEMIVTA 122
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
F +G ++ L+ VYQ F ++S R+ ++ ++ S VGIDD I+ A ++ +T
Sbjct: 123 FADGDRKLLKNLLSPDVYQGFEQAISEREQRDERMQFSFVGIDDATIVGAEQKDREAMVT 182
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+RIV Q ISA D ++ D E +V D+WTF R+ +PNW L T+ +
Sbjct: 183 LRIVAQVISAVVKPDETVVDGDLETVVEVKDVWTFARDTRSRDPNWKLAGTESED 237
>gi|163850987|ref|YP_001639030.1| import inner membrane translocase subunit Tim44 [Methylobacterium
extorquens PA1]
gi|218529814|ref|YP_002420630.1| import inner membrane translocase subunit Tim44 [Methylobacterium
chloromethanicum CM4]
gi|240138118|ref|YP_002962590.1| hypothetical protein MexAM1_META1p1451 [Methylobacterium extorquens
AM1]
gi|254560680|ref|YP_003067775.1| hypothetical protein METDI2225 [Methylobacterium extorquens DM4]
gi|163662592|gb|ABY29959.1| import inner membrane translocase subunit Tim44 [Methylobacterium
extorquens PA1]
gi|218522117|gb|ACK82702.1| import inner membrane translocase subunit Tim44 [Methylobacterium
chloromethanicum CM4]
gi|240008087|gb|ACS39313.1| conserved hypothetical protein, putative membrane protein
[Methylobacterium extorquens AM1]
gi|254267958|emb|CAX23826.1| conserved hypothetical protein, putative membrane protein
[Methylobacterium extorquens DM4]
Length = 239
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 11/237 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSG---KYVFSKRDERGIITL 62
DS D L+F + FV +LR VLG+KTG E+ + + + ++ L
Sbjct: 2 QDSFDATTLIFLALAVFVIWRLRSVLGQKTGTERSPFRPVERNRTEPPAGRGEGDNVVRL 61
Query: 63 GKGKKKDNL--------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + G+ + + + +V + F+P+ FL A+ +YE I
Sbjct: 62 PGADRSPAGAAAVQTAARDWRGIAEPGSAVARGLEQVVQLEPAFEPRAFLEGAKGAYETI 121
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
V +F +G + L+ V + F ++S R+ + +++ + ID +I ++
Sbjct: 122 VTAFAKGDRKTLRALLSREVCEGFERAISEREKRNETAETTFISIDKAEIAAVEVKNRAA 181
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
IT+R + I+A+ D D +I + E +V D+WTF R + +PNW L++T G
Sbjct: 182 QITVRFLSNLITATRDADGKVIDGNAETGVEVPDVWTFARTLGSRDPNWQLVATDAG 238
>gi|46201691|ref|ZP_00054533.2| COG4395: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 219
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+ FA + F+ L+LR VLGK+TG E+P K+ + ++ L ++ +
Sbjct: 10 IVFFAMVAAFLVLRLRSVLGKRTGTERPPE-----KWSPVEAPADNVVDLQSVRRSASEP 64
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
P T L + + I + FD FL A+ ++E IV +F G ++ L+
Sbjct: 65 ------PAETPLGQGLAAIRAADRGFDLDGFLGGAKAAFEMIVIAFAHGDKATLQPLLAP 118
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY+ F++++ R+ + + +++ LVGI +++ A ++ +TI+ V + ++A D
Sbjct: 119 DVYRHFSEAIDARRQHGETLQTELVGIRSAELVEAGMDGRFAALTIKFVSEQVNALRDAK 178
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ +PE VID+WTF R+ +PNW L +T +
Sbjct: 179 GEVVEGNPERVIDVIDLWTFRRDTRSPDPNWALTATHTPD 218
>gi|121602069|ref|YP_989543.1| Tim44 domain-containing protein [Bartonella bacilliformis KC583]
gi|120614246|gb|ABM44847.1| Tim44 domain protein [Bartonella bacilliformis KC583]
Length = 230
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 121/225 (53%), Gaps = 4/225 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSG--KYVFSKRDERGIITLGKG- 65
D + ++ + VF+QLR VLGK+TG E+P +SG K I + +
Sbjct: 3 FDVVFVIALVVMVIVFVQLRNVLGKRTGFERPPFNPYSGHSKKQVEADTTGDITSFPQQI 62
Query: 66 -KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+K + I+ + P G+ LN +R I + F P+ F+N + +YE I+ +F +G
Sbjct: 63 NAQKGDFSDIDAIAPKGSALNDGLRAIRQADSSFSPQFFINGVQVAYEMIMTAFAQGNRD 122
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
+++L+ V++ F ++ R+ + ++ + VGI+ ++ I A +++ +T+RIV +
Sbjct: 123 QLKELLSQNVFESFCKAIEQREKRNERIQFTFVGINKVEFIAAEMQKREELLTVRIVSEI 182
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
IS Y++ I DPE ++ D+WTFVR+ NPNW L +T+
Sbjct: 183 ISVIYNEQEERIDGDPEAIVEIRDVWTFVRDSVSKNPNWKLFATE 227
>gi|254463881|ref|ZP_05077292.1| transporter, Tim44 family [Rhodobacterales bacterium Y4I]
gi|206684789|gb|EDZ45271.1| transporter, Tim44 family [Rhodobacterales bacterium Y4I]
Length = 214
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+L+ A I F+ L+LR VLG + G EKP + + + G +D
Sbjct: 1 MIQLLVLAGIAVFLILRLRSVLGTREGFEKPPLPQSEARGRRP-----DLEVIEGGPDRD 55
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D + E G++ + + + F ++F+ AR +YE I+ F G + I+
Sbjct: 56 ITDYVAE----GSKQAQALAAMKRAEPSFQVQEFVQGARGAYEMILMGFEHGNLDDIQPF 111
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISA 187
+ V+ F D+++ R+ +++ +G+ + + +A + T IT+R VG+ S
Sbjct: 112 LAEDVFDSFVDAVAQREDKGYKIEADFIGVRETTLQDAQFDPQTGRAEITMRFVGELTSV 171
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D+ ++ DP+ + D W F RN+ +PNW L++T
Sbjct: 172 VRDRGGDIVEGDPKAIKRQKDTWIFARNMGSDDPNWQLVATDA 214
>gi|86136747|ref|ZP_01055325.1| transporter, Tim44 family protein [Roseobacter sp. MED193]
gi|85826071|gb|EAQ46268.1| transporter, Tim44 family protein [Roseobacter sp. MED193]
Length = 218
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 111/226 (49%), Gaps = 11/226 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP + + + G
Sbjct: 1 MESPLISLLVLAGIAVFLILRLRSVLGTREGFEKPPVAPTQKRSNGP-----DLEVIEGG 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+D D + E G+ K + + V F +F+ AR++YE I+ F +G++
Sbjct: 56 PDRDITDYVEE----GSDQAKALAAMKRVEPSFQVGEFVQGARSAYEMILMGFEKGELDD 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + V+ F ++++ R+ +++ +G+ + +++A +E T +T+R +G+
Sbjct: 112 IQGFLAEDVFDSFVEAVAQREDQGLTIEAEFIGVRETAVVDAIFDETTGVAELTMRFIGE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
S +++ ++ D + + DIW F R++ +PNW L++T
Sbjct: 172 MTSVVRNREGEIVEGDAKAIKRQKDIWVFARSMGVDDPNWQLVATD 217
>gi|126734398|ref|ZP_01750145.1| import inner membrane translocase, subunit Tim44 [Roseobacter sp.
CCS2]
gi|126717264|gb|EBA14128.1| import inner membrane translocase, subunit Tim44 [Roseobacter sp.
CCS2]
Length = 220
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 9/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LRGVLG + G EKP K D + G
Sbjct: 1 MNSPLIQLLVLAGIAVFLILRLRGVLGTREGFEKPAVTRPEPSSRVGKPD---FDVIEGG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D I E G+ K + D+ F+ +FL AR +YE I+ +F G + +
Sbjct: 58 PDLDITDHIEE----GSDSAKALADMKRADPSFNVSEFLGGARGAYEMILMAFENGDLDS 113
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I + VY+ F + R+ V + +GI DM + A ++ +++R +
Sbjct: 114 IVPFISEDVYEAFASVVDERQRQGLTVDAKFIGISDMTLTEAVFDDFSKEGEVSVRFKSE 173
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S D +I + D WTF R + +PNW L++T
Sbjct: 174 MTSVVRDNAGDIIEGSETEIKRQKDTWTFARKMDADDPNWRLVAT 218
>gi|170750111|ref|YP_001756371.1| import inner membrane translocase subunit Tim44 [Methylobacterium
radiotolerans JCM 2831]
gi|170656633|gb|ACB25688.1| import inner membrane translocase subunit Tim44 [Methylobacterium
radiotolerans JCM 2831]
Length = 237
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 113/235 (48%), Gaps = 9/235 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERGIITLGK 64
DS D ++F + FV +LR VLG+KTG E+ PF + R + +
Sbjct: 2 QDSFDVTTIIFLALAVFVIWRLRSVLGQKTGAERSPFKPVDRSRTEPQARSDGDNVVRLP 61
Query: 65 GKKK--------DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
G + + G+ + + + + FDP+ F+ A+++YEAI+
Sbjct: 62 GADRVQAAPPPAAAPRDWRGIAEPGSEVARGLEACIQAEPSFDPRAFIEGAKSAYEAIMI 121
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F +G + L+ V + F +++ R+ N + ++++ V ID +I+ + ++
Sbjct: 122 AFAKGDRKTLRGLLSKEVGEAFERAIAERERNRQTLETTFVSIDKAEIVAVEVRNRVAHV 181
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
T+R + I+A+ + D ++ E +V D+WTF R + +PNW L++T+ G
Sbjct: 182 TVRFLSNLITATRNADGKVVDGSAETVVEVPDVWTFARTLGSRDPNWQLVATEAG 236
>gi|259417909|ref|ZP_05741828.1| import inner membrane translocase, subunit Tim44 [Silicibacter sp.
TrichCH4B]
gi|259346815|gb|EEW58629.1| import inner membrane translocase, subunit Tim44 [Silicibacter sp.
TrichCH4B]
Length = 218
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + +R +
Sbjct: 1 MESPLIELLVLAGIAVFLILRLKSVLGTREGFEKPPLANNE-----APAPQRKFEVIEGS 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D + ++E G+ + + D+ + F +F+ AR +YE I+ F G++
Sbjct: 56 PDDDIVAYVDE----GSPQAQALSDMKRADSSFQVAEFVQGARGAYEMILMGFETGELDG 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I+ + ++Q F D++S R+ +++ +G+ + I++A+ + +T +T+R VG+
Sbjct: 112 IQPFISEEIFQSFVDAVSAREDQGLTIEAEFIGVRETTIVDATFDAATSTAEVTVRFVGE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
SA ++ ++ DP+ + D WTF R + +PNW+L++T
Sbjct: 172 LTSAVRNRAGEIVEGDPKAVKRQKDTWTFSRQMGTGDPNWLLVATDA 218
>gi|163738003|ref|ZP_02145419.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis BS107]
gi|163742601|ref|ZP_02149987.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis 2.10]
gi|161384186|gb|EDQ08569.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis 2.10]
gi|161388619|gb|EDQ12972.1| transporter, Tim44 family protein [Phaeobacter gallaeciensis BS107]
Length = 218
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + + + + G
Sbjct: 1 MESPVIQLLVLAGIAVFLILRLKSVLGTREGFEKPAVPQADRQNRRPE-----LEVIEGG 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + E P + + + F+ +DF+ AR +YE I+ +F G++
Sbjct: 56 PDHDIVDYVPEDSPQASD----LAAMKKAEPSFEVRDFVQGARGAYEMILMAFERGELDD 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
IE + V+ F +++ R+ +++ +G+ + + + S + T IT+R V +
Sbjct: 112 IEAFLAPDVFDSFVTAVAHREDQGLTIEAEFIGVRETTLTDTSFDPATGDAQITMRFVAE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S D+ ++ DP+ + D W F R + ++PNW L++T
Sbjct: 172 LTSVVRDRGGDIVEGDPKAVKRQKDTWVFGRTMGSADPNWHLVATDA 218
>gi|209966267|ref|YP_002299182.1| hypothetical protein RC1_3002 [Rhodospirillum centenum SW]
gi|209959733|gb|ACJ00370.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 230
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK----PFSGFFSGKYVFSKRDERGIITLGKGK 66
F IL+F + F+ +LR VLG++ G E+ PF+ + + ++ L
Sbjct: 8 FDILIFGMVAAFLVYRLRSVLGRRHGEERQRPNPFTPPPKAGQAPAPAESDNVVPLPDRG 67
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ E PI L + +R I + F+ K FL A+ ++E IV +F +G +
Sbjct: 68 RPPEAPLPVETGPIS--LEEGLRQIRAADPTFNEKHFLQGAKAAFEMIVKAFADGDTPTL 125
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
L+ VY F +++ R++ + ++ + + + + A ++ +TIR + +
Sbjct: 126 RPLLADDVYDGFAEAIRKRQAAGETRETRITAFESVDLKEARMDGRHAMVTIRFITHQVD 185
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + ++ DP+ +V+DIWTF RN +PNW+L+ T++
Sbjct: 186 CTVNAAGDVVDGDPDEAIEVVDIWTFSRNTRSPDPNWLLVETRVP 230
>gi|163757477|ref|ZP_02164566.1| hypothetical protein HPDFL43_18742 [Hoeflea phototrophica DFL-43]
gi|162284979|gb|EDQ35261.1| hypothetical protein HPDFL43_18742 [Hoeflea phototrophica DFL-43]
Length = 234
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 7/218 (3%)
Query: 22 FVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD---ERGIITLG----KGKKKDNLDSI 74
VF+QLR VLGK+TG+E+P + +D + ++TL + + D ++
Sbjct: 17 IVFIQLRAVLGKRTGHERPPREQMERRDQTDAQDGIDDPKVVTLPRRGREAAEPDAFAAV 76
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
+ G+ LNK +R++V F+PK+F+ A +YE IV ++ +G ++ L+ V
Sbjct: 77 DAYAEPGSDLNKGLRELVKADPSFNPKEFVGGATMAYEMIVSAYADGDRKTLKSLLSREV 136
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNL 194
+ F ++ R++ + V+S+ VGI+ II A ++ +T+RI+ Q ISA+ DKD
Sbjct: 137 FDGFVSAIDEREARGETVRSNFVGIEKANIIQAEMKGTEANVTLRIISQLISATLDKDGE 196
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ D V D+WTF R+ +PNW LI+T+ +
Sbjct: 197 VVEGDLVEVTDVNDVWTFTRDTRSRDPNWRLIATEADQ 234
>gi|84684638|ref|ZP_01012539.1| hypothetical protein 1099457000260_RB2654_13474 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667617|gb|EAQ14086.1| hypothetical protein RB2654_13474 [Rhodobacterales bacterium
HTCC2654]
Length = 219
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M S +++ A I F+ L+LR VLG + G EKP + V + + G
Sbjct: 1 MSSPIIQLIVLAAIAIFLILRLRDVLGTREGFEKPVVSRTESQRV---DNRGKFEVIEGG 57
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + + I + + + F DFLN AR +YE I+ +F G++
Sbjct: 58 PDTDITDHVEDPASI-----EALAKMKGAERSFAVGDFLNGARGAYEMILMAFEAGELDK 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I+ + VY+ F + R+ + + ++ VG+ +MK++ A ++ ITIR +G+
Sbjct: 113 IKPFLSDEVYESFATVVEQREKDGYKIDANFVGLREMKLVEAEFDDESREGEITIRFIGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
S DK ++ +P + D+WTF R + NPNW L++T
Sbjct: 173 ITSVVRDKSGEIVEGNPTEVKRQKDVWTFARIMGSENPNWQLVAT 217
>gi|99082695|ref|YP_614849.1| import inner membrane translocase, subunit Tim44 [Ruegeria sp.
TM1040]
gi|99038975|gb|ABF65587.1| import inner membrane translocase subunit Tim44 [Ruegeria sp.
TM1040]
Length = 218
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 11/227 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G EKP + +R +
Sbjct: 1 MESPLIELLVLAGIAVFLILRLKSVLGTREGFEKPPLASSETR-----APQRKFEVIEGS 55
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D + ++E G+ +K + D+ + F +F+ AR +YE I+ F G++
Sbjct: 56 PDDDIIAYVDE----GSPQSKALSDMKRSDSSFQVAEFVQGARGAYEMILMGFETGELDG 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQ 183
I+ + ++Q F D++S R+ +++ +G+ + II+A+ + +T IT+R VG+
Sbjct: 112 IQPFISDDIFQSFVDAVSAREDQGLTIEAEFIGVRETSIIDATFDTATSTAEITVRFVGE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
SA ++ ++ DP+ + D WTF R + +PNW+L++T
Sbjct: 172 LTSAVRNRAGEIVEGDPKAVKRQKDTWTFSRQMGTGDPNWLLVATDA 218
>gi|254476055|ref|ZP_05089441.1| transporter, Tim44 family [Ruegeria sp. R11]
gi|214030298|gb|EEB71133.1| transporter, Tim44 family [Ruegeria sp. R11]
Length = 214
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+L+ A I F+ L+L+ VLG + G EKP + + + G +D
Sbjct: 1 MIQLLVLAGIAVFLILRLKSVLGTREGFEKPIAPPAERPSKRPE-----FEVIEGGPDQD 55
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D + P G+ + + + V F +DF+ AR +YE I+ +F G++ I+
Sbjct: 56 ITDYV----PEGSAQAEDLAAMKKVEPSFQVRDFVQGARGAYEMILMAFERGELDDIQPY 111
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQFISA 187
+ V+ F +++ R+ +++ +G+ + + + S + IT+R V + S
Sbjct: 112 LAPDVFDSFVTAVAHREDQGLTIEADFIGVRETTLTDTSYDSVTGEAQITMRFVAEMTSV 171
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++ DP+ + D W F R + S+PNW L++T
Sbjct: 172 VRNSAGEIVEGDPKAIKRQKDTWVFGRTMGSSDPNWFLVATDA 214
>gi|149204297|ref|ZP_01881264.1| transporter, Tim44 family protein [Roseovarius sp. TM1035]
gi|149142182|gb|EDM30229.1| transporter, Tim44 family protein [Roseovarius sp. TM1035]
Length = 219
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E P R R + G
Sbjct: 1 MNSPILQLLVLAGIAIFLILRLKSVLGTRDGFEGP----TRSAPAPETRRRREFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + P + + ++ + DF FL AR +YE I+ +F GK+
Sbjct: 57 PDHDIVDHV----PEDSDAAAALAEMKRIEPDFSVTTFLQGARGAYEMILMAFERGKLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
+ +D VY+ F + R+ +++ +G+ ++ + +A + +T I++R VG+
Sbjct: 113 VTPFLDRDVYETFAQVVDAREQQGLTIEAEFIGVRELTLADARFDADTRRAEISVRYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
IS D ++ P + D+WT+ R + +PNW L++T
Sbjct: 173 LISVVRDSTGEIVEGVPGQSKRQKDVWTYERVMGADDPNWRLVAT 217
>gi|188580934|ref|YP_001924379.1| import inner membrane translocase subunit Tim44 [Methylobacterium
populi BJ001]
gi|179344432|gb|ACB79844.1| import inner membrane translocase subunit Tim44 [Methylobacterium
populi BJ001]
Length = 242
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSG---KYVFSKRDERGIITL 62
DS D L+F + FV +LR VLG+KTG E+ + + + ++ L
Sbjct: 2 QDSFDATTLIFLALAVFVIWRLRSVLGQKTGTERSPFRPVERNRTEPPAGRGEGDNVVRL 61
Query: 63 GKGKKKDNL-----------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY 111
+ + + + + + +V V FDP+ FL A+ +Y
Sbjct: 62 PGADRAQAGAQAGTATQTATRDWRGIAEPNSAVARGLEQVVQVEPGFDPRAFLEGAKGAY 121
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
E IV +F +G + L+ V + F ++S R+ + +++ + ID +I ++
Sbjct: 122 ETIVTAFAKGDRKTLRALLSREVCEGFERAISEREKRRETAETTFISIDKAEIAAVEVKN 181
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
IT+R + I+A+ D D +I + E +V D+WTF R + +PNW L++T G
Sbjct: 182 RAAQITVRFLSNLITATRDADGKVIDGNAETGVEVPDVWTFARTLGSRDPNWQLVATDAG 241
>gi|85705737|ref|ZP_01036834.1| transporter, Tim44 family protein [Roseovarius sp. 217]
gi|85669727|gb|EAQ24591.1| transporter, Tim44 family protein [Roseovarius sp. 217]
Length = 219
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+L+ VLG + G E P R + G
Sbjct: 1 MNSPILQLLVLAGIAIFLILRLKSVLGTRDGFEGP----ARNAPTPETSRRREFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + P + + D+ + DF FL AR +YE I+ +F GK+
Sbjct: 57 PDHDIVDHV----PEDSEAAGALADMKRIEPDFSVTTFLQGARGAYEMILMAFERGKLDE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
I +D VY+ F + +R+ ++++ +G+ ++ + +A + IT+R VG+
Sbjct: 113 ITPFLDREVYETFAQVVDSREQQGLSIEAEFIGVRELSLFDAKFDAATRRAEITVRYVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+S D + ++ P + DIWT+ R + +PNW L++T
Sbjct: 173 LVSVVRDSNGEIVEGAPGQSKRQKDIWTYERIMGSDDPNWRLVAT 217
>gi|254440619|ref|ZP_05054113.1| Tim44-like domain family [Octadecabacter antarcticus 307]
gi|198256065|gb|EDY80379.1| Tim44-like domain family [Octadecabacter antarcticus 307]
Length = 219
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S +L+ A I F+ L+LR VLG + G EKP + S+R + + G
Sbjct: 1 MNSPVLQLLVLAGIAIFLILRLRNVLGTREGFEKPKVAPA----IPSRRPTPDLEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D ++ + + +V+ + + F+ ++FL AR +YE I+ F +G +
Sbjct: 57 PDPDVTDYVD----ADSDVARVLTAMKTADRSFNVREFLRGARGAYEMILTGFEKGDIAE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
I+ + S VY F + R+ + +V +GI + +++A +E T I+I+ + +
Sbjct: 113 IKPFLSSDVYDAFAGVVEAREKDGLSVDFKFIGISETTLVDAEFDETTKNAEISIKFLCE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
SA YDK L K D+WTF R + +PNW L++T
Sbjct: 173 STSAVYDKGGDLKEGSATDIKKQRDVWTFGRTMGTGDPNWFLVAT 217
>gi|144900161|emb|CAM77025.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Magnetospirillum gryphiswaldense MSR-1]
Length = 243
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 104/218 (47%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I+ FA + F+ L+LR VLGK+TGNE+P + K D +T + + D
Sbjct: 10 IVFFAVVAVFLILRLRSVLGKRTGNEEPPRWTRTPKDDGETADNVIDLTRARRPVEAEPD 69
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
++ L + I + F FL+ AR ++E IV +F G A+ L+
Sbjct: 70 VTADVAATAGPLARGEAAIRARDPSFSNTGFLSGARMAFEMIVGAFAAGDKKALRPLLAD 129
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+VY+ F D++ R + + + ++GI +II A + +T+R V + I+ D D
Sbjct: 130 QVYKPFCDAIDARARAGEELSTEIMGIKSAEIIEAIMVGTVAQVTVRFVSEQINVIKDLD 189
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ DP V D WTF R+ +PNW L +T+
Sbjct: 190 GRIVEGDPSRIVPVTDEWTFSRDTRSKDPNWHLSATRA 227
>gi|304392739|ref|ZP_07374679.1| import inner membrane translocase, subunit Tim44 [Ahrensia sp.
R2A130]
gi|303295369|gb|EFL89729.1| import inner membrane translocase, subunit Tim44 [Ahrensia sp.
R2A130]
Length = 230
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D LL F+F +LR VLG + G EKP ++ ++TL K+ +
Sbjct: 2 DLFTLLPLLAAVFLFWKLRSVLGTRNGIEKPPYDPYTND---PNEAADNVVTLPGAKRAN 58
Query: 70 NLDS-----------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
D+ I +L L + + I S FDP++FL R +YE IV F
Sbjct: 59 APDAEEDAGEAARKRIGKLAGKDKSLERGLLAIHSRDPGFDPEEFLQGGRMAYEMIVTGF 118
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G +E L+ VY+ F + R + V +S VGID I A + + IT+
Sbjct: 119 ADGDKRTLENLLSREVYESFATVIDERSERGEKVNASFVGIDKAVIEGAEVLRDEAQITV 178
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
R V + ISA+ D + +I D + +V D+WTF R + +PNW L++T
Sbjct: 179 RFVSEMISATLDSSDEVIEGDLQEVAEVTDVWTFARPVKSRDPNWKLVATDA 230
>gi|217977326|ref|YP_002361473.1| import inner membrane translocase subunit Tim44 [Methylocella
silvestris BL2]
gi|217502702|gb|ACK50111.1| import inner membrane translocase subunit Tim44 [Methylocella
silvestris BL2]
Length = 239
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 11/234 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFF-SGKYVFSKRDERG---IIT 61
+S D ++FA + FV +LR +LG +TG EKP F +G+ +KR G +I
Sbjct: 2 QNSFDVSTIIFALLAAFVVWKLRSILGARTGTEKPPRNPFIAGEPSAAKRPGEGEGKVIP 61
Query: 62 LGKGKKK-------DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
L D G++ + I + F+ K FL A+ +YE I
Sbjct: 62 LPGASAPIAQAAAADPSSRWKPHAEPGSKAWAGLDAIAAADRSFEIKSFLEGAKTAYEMI 121
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
V F +G ++ L+D VY F +L+ R+ +++S V ID+ I +A +
Sbjct: 122 VIGFADGDRPMLQNLLDKSVYDSFVTALTEREKRGDKIETSFVAIDNGAIADAELNGRMA 181
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
I +R Q I+A+ + +I +PE ++ D W F R++ +PNW LIST
Sbjct: 182 EIAVRFSAQIITATRNAAGTVIEGNPEQVVEINDTWRFARDVGARDPNWRLIST 235
>gi|182680015|ref|YP_001834161.1| import inner membrane translocase subunit Tim44 [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182635898|gb|ACB96672.1| import inner membrane translocase subunit Tim44 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 260
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 20/248 (8%)
Query: 4 IKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV------------- 50
D I++FA + F+ +LR VLG + GNE+P G++
Sbjct: 2 THEPPFDMSIVIFALLAAFLIWKLRSVLGTRQGNEEPRDNSVPGQWPSLFSPKSQDPSQA 61
Query: 51 -------FSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDF 103
R G + + + + + I F P F
Sbjct: 62 NKNGAPGQPTFPNRPSPAGASGAPAEAGRNWSAFVEPNSPAAAGLEAIAKADPAFAPGPF 121
Query: 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK 163
L AR++YE IV++F EG+ A+ L+ VY F +++ R+S V+ + V +D K
Sbjct: 122 LEGARHAYEMIVNAFAEGQRSALANLLVRDVYAGFEAAITERESQGHKVELTFVSLDAAK 181
Query: 164 IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
I A++ IT+R + I + D ++ P+ V D+WTF R I +PNW
Sbjct: 182 IEEAALFHQIAEITLRYKAKMIKVTRDAQGAVVEGSPDHVVDVDDLWTFERMIGSQDPNW 241
Query: 224 VLISTKLG 231
L +TK G
Sbjct: 242 KLAATKTG 249
>gi|13473820|ref|NP_105388.1| hypothetical protein mlr4544 [Mesorhizobium loti MAFF303099]
gi|14024571|dbj|BAB51174.1| mlr4544 [Mesorhizobium loti MAFF303099]
Length = 211
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Query: 30 VLGKKTGNEKPFSGFFSGK--YVFSKRDERGIITLG------KGKKKDNLDSINELFPIG 81
+LG++TG+E+P +S + + +++L + D +I+
Sbjct: 1 MLGRRTGSERPPFDPYSAARTDKDATQKPENVVSLPRKRLPGEPAPADAYTAIDAFAKPD 60
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T LNK +R I FDPK F++ A+ +YE IV ++ +G ++ L+ V+ F +
Sbjct: 61 TDLNKGLRAIKDNDPSFDPKGFVDGAKMAYEMIVMAYADGDRKTLKNLLSREVFDGFVAA 120
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+ R++ + ++SS VGID I++A ++ ++T+RI+ + ISA+ DK +I DPE
Sbjct: 121 IGEREAKSEKIQSSFVGIDKADIVSAEMKGGEAHVTLRIISELISATRDKAGTVIDGDPE 180
Query: 202 IFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+V D+WTF R+ +PNW LI+T+ +
Sbjct: 181 TVAEVKDVWTFARDTRSRDPNWKLIATEEED 211
>gi|312115344|ref|YP_004012940.1| import inner membrane translocase subunit Tim44 [Rhodomicrobium
vannielii ATCC 17100]
gi|311220473|gb|ADP71841.1| import inner membrane translocase subunit Tim44 [Rhodomicrobium
vannielii ATCC 17100]
Length = 233
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 13/236 (5%)
Query: 6 MDSGDFLI--LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLG 63
M S F + +L + +FL+LR VLG++TG+E+ ++ + ++ L
Sbjct: 1 MTSEIFDLTNILLLAVAVAIFLRLRSVLGRRTGDEETRLDNYARDAAPT---RDNVVPLP 57
Query: 64 KGKKKDNLDSINELF--------PIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV 115
+ + + P + + +R I + FD F+N A+ +YE+I+
Sbjct: 58 RAEPRPGGAPSAGPSVDERLGNVPADSAVRAPLRQIATSDPSFDTASFVNGAKIAYESII 117
Query: 116 DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY 175
++ +G + L+ V+ FN ++ R+++ + V+ +GI +I+ A +
Sbjct: 118 TAYAKGDRETLRHLLAPEVFDSFNVVINDREASGETVEFHFIGISSSEIVEAQLLGRVAQ 177
Query: 176 ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ +R V ++A+ DK ++ D + +V DIWTF R++ NPNW L++T
Sbjct: 178 VKVRFVSDLVTATRDKHGEVVDGDDKAVRQVTDIWTFSRDVSSPNPNWQLVATDAA 233
>gi|110677837|ref|YP_680844.1| hypothetical protein RD1_0444 [Roseobacter denitrificans OCh 114]
gi|109453953|gb|ABG30158.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 220
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
S +L+ A I F+ +L+ VLG + G E + + R + G
Sbjct: 3 SSPLIQLLVLAGIAVFLIFRLKNVLGTRDGFE----PGPAQAPTSDRSPTRDFEVIEGGP 58
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
D D ++E + + + ++ + F+ +FL AR +YE IV + G++ I
Sbjct: 59 DLDITDHVDEH----SDAAEALANMKRLEPGFNVTEFLGGARGAYEMIVMGYENGELADI 114
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQF 184
+ + +Y+ F D ++ R+ ++++ +G+ ++K+I+A+++ +T +TIR +
Sbjct: 115 QPFLAEDIYESFVDGVAAREDQGLTIEANFIGVRELKLIDATLDPDTNEAELTIRFTAEL 174
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
SA + + +I + D W+F R + +PNW+L+ST
Sbjct: 175 TSAVRNSEGEIIEGSLTDVKRQKDTWSFARPMGSDDPNWILVSTD 219
>gi|319406501|emb|CBI80142.1| Tim44 domain protein [Bartonella sp. 1-1C]
Length = 230
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 24 FLQLRGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFP 79
F+QLR VLGK+ G EKP +SG K D+ + +K + I+ + P
Sbjct: 18 FVQLRNVLGKRVGFEKPPFDSYSGYTKKPIEVEKNDKIVSLPDQSSSQKGDFSEIDAIAP 77
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
G++LN +R I F P+ F+N + YE I+ +F +G + +++ + S V++ F
Sbjct: 78 EGSKLNSGLRSIRQFDPSFSPQFFVNGVQIVYEIIMTAFAQGDRNRLKEHLSSDVFESFC 137
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
+++ R+ N + ++ + VGI ++ I A +++ +T+RI+ + ISA+Y++ I +
Sbjct: 138 EAIELREKNNERIQFTFVGISKIEFIAAEMQKEEALLTVRIISEMISATYNEQEECIEGN 197
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
PE ++ DIWTF+RNI NPNW L +T+
Sbjct: 198 PEAIIEIRDIWTFIRNITSKNPNWKLFATE 227
>gi|163732954|ref|ZP_02140398.1| hypothetical protein RLO149_09850 [Roseobacter litoralis Och 149]
gi|161393489|gb|EDQ17814.1| hypothetical protein RLO149_09850 [Roseobacter litoralis Och 149]
Length = 220
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 6 MDS-GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK 64
M+S +L+ A I F+ +L+ VLG + G E S + R +
Sbjct: 1 MNSSPLIQLLVLAGIAVFLIFRLKNVLGTRDGFE----PGPSQTPMSDSAPMRDFEVIEG 56
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G D D + E + + + ++ + F+ +FL AR +YE IV + G++
Sbjct: 57 GPDLDITDHVEEN----SDAAEALANMKRLEPGFNVTEFLGGARGAYEMIVMGYENGELA 112
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVG 182
I+ + +Y+ F D ++ R+ +++S +G+ ++K+++A+++ N +TIR
Sbjct: 113 DIQPFLAEDIYESFVDGVAAREDQGLTIEASFIGVRELKLMDATLDPETNEGELTIRFTA 172
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ SA + + +I + D W+F R + +PNW+L+ST
Sbjct: 173 ELTSAVRNSEGEIIEGSLTEVKRQKDTWSFARPMGSDDPNWILVSTD 219
>gi|163797060|ref|ZP_02191015.1| hypothetical protein BAL199_11141 [alpha proteobacterium BAL199]
gi|159177576|gb|EDP62129.1| hypothetical protein BAL199_11141 [alpha proteobacterium BAL199]
Length = 222
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
I+L A + FV +LR VLG++TG+E+ + F+ + ++ G I +
Sbjct: 2 PYLDIILLAMLAGFVIFKLRSVLGRRTGHERRPTDPFA---ESPETNDNGNIVRLPDRSA 58
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+++D ++ P G+ + + I FD + FL A++++ IV++F +G V +
Sbjct: 59 ESVDGSDDDVP-GSSMAAGIMQIKLADDGFDERQFLQGAKSAFAMIVEAFAKGDVDGLRP 117
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ +Y F ++ + + ++++V I ++ AS+E + +T+ V + + +
Sbjct: 118 LLSRELYGGFASAIEACEKAGEIQETTIVTIRSADVVEASLENSVAKVTVEFVTEQVKVT 177
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D +I DP+ + DIWTF R+I +PNW L++T++ E
Sbjct: 178 RSSDGEVIDGDPDRIDILTDIWTFARDIGNRDPNWELVATRVPE 221
>gi|294675588|ref|YP_003576203.1| import inner membrane translocase subunit Tim44 [Rhodobacter
capsulatus SB 1003]
gi|294474408|gb|ADE83796.1| import inner membrane translocase, subunit Tim44 [Rhodobacter
capsulatus SB 1003]
Length = 219
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M F +++ A I F+ L+L+ VLG + G E R + G
Sbjct: 1 MSPALFQLIVLAAIAIFLILKLKSVLGTREGYEDEPMPV----EAPGPRAADRFEVIEGG 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D +D + P G+ + + V F+ FL ++ +YE I+ +F G + A
Sbjct: 57 PDHDIIDHV----PEGSDAAVALAQMKRVEPTFNVGAFLQGSKVAYEMILMAFERGDLSA 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQ 183
+ + + V + F +++ R+ V++S +G+ ++ + AS E +T+R G+
Sbjct: 113 VRRFLAPEVLEAFETAVADRQRQGLTVEASFLGLRELVLTEASFNESSREAEVTVRFGGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
IS + D + ++ DP+ K D WTF R + S+PNW L++T
Sbjct: 173 LISVARDANGQIVEGDPKAPRKQRDSWTFARVMGSSDPNWQLVAT 217
>gi|159045985|ref|YP_001534779.1| import inner membrane translocase [Dinoroseobacter shibae DFL 12]
gi|157913745|gb|ABV95178.1| import inner membrane translocase [Dinoroseobacter shibae DFL 12]
Length = 221
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S IL+ + F+ L+LR VLG + G EK + + R R + G
Sbjct: 1 MNSNMLQILVLLGVAVFLILRLRSVLGTREGFEKKPVPLDGPERDVTPR--RDFEVIEGG 58
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D D + P G+ K + + F+ +FL A+ +YE I+ SF G +
Sbjct: 59 PDTDITDHV----PDGSDSAKALAAMKMAEPGFNVTEFLGGAKGAYEWILMSFENGDMDD 114
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
++ + + + F++ + R V++ VG+ + ++ A+ + +T +T+R VG+
Sbjct: 115 VQGFLSEELSEAFSEVIEQRNEQGLTVEAEFVGVRETTLVEAAFDRDTREGEVTVRFVGE 174
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + ++ DP + D+WTF R + +PNW L++T
Sbjct: 175 LTFVVRNAEGEIVEGDPTEIKRQKDVWTFARVMGSDDPNWRLVAT 219
>gi|319403587|emb|CBI77169.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 230
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 26 QLRGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIG 81
QLR VLGK+ G EKP +SG K D+ + +K + I+ + G
Sbjct: 20 QLRNVLGKRIGFEKPPFDSYSGYTKKPVEVEKNDKIVSLPDQSSSQKSDFSEIDAIASEG 79
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
++LN +R I F P+ F+N + YE I+ +F +G + +++ + S V++ F ++
Sbjct: 80 SKLNSGLRSIRQFDPSFSPQFFVNGVQIVYEIIMTAFAQGDRNQLKEHLSSDVFESFCEA 139
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+ R+ N + ++ + VGI ++ I A +++ ++T+RIV + ISA+Y++ I +PE
Sbjct: 140 IELREKNNERIQFTFVGISKIEFIAAEMQKEEAFLTVRIVSEIISATYNEQEECIEGNPE 199
Query: 202 IFGKVIDIWTFVRNIPPSNPNWVLISTK 229
++ DIWTFVRNI NPNW L +T+
Sbjct: 200 AIIEIRDIWTFVRNITSKNPNWKLFATE 227
>gi|315122039|ref|YP_004062528.1| hypothetical protein CKC_01445 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495441|gb|ADR52040.1| hypothetical protein CKC_01445 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 231
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 154/231 (66%), Positives = 182/231 (78%), Gaps = 4/231 (1%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV----FSKRDERGIIT 61
M GDFLILL FI FV L+LR LGK+TG+EKP SGF + K D +++
Sbjct: 1 MYLGDFLILLCFFIAVFVILKLRSALGKRTGHEKPLSGFSPEQRKKSIFSPKGDGWNVVS 60
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
L KGKK+D LDSIN LFP+GTRLNKV RDIVS+Y+ FDPKDFLN R+SY IVDSFFEG
Sbjct: 61 LNKGKKEDVLDSINGLFPVGTRLNKVFRDIVSIYSGFDPKDFLNGVRDSYGVIVDSFFEG 120
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ IEKL+DS+VYQDF DSL +KS+EK +KSSLVG+DD+KI+NAS+E N +YIT RIV
Sbjct: 121 NILKIEKLIDSKVYQDFADSLLIQKSSEKVIKSSLVGLDDLKIVNASVEGNNIYITTRIV 180
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
GQFISASYDK+N LI+ DPEIFGKV+D+WTFVRNI SNPNW+LISTK GE
Sbjct: 181 GQFISASYDKNNALIAGDPEIFGKVVDVWTFVRNISSSNPNWILISTKPGE 231
>gi|83950785|ref|ZP_00959518.1| transporter, Tim44 family protein [Roseovarius nubinhibens ISM]
gi|83838684|gb|EAP77980.1| transporter, Tim44 family protein [Roseovarius nubinhibens ISM]
Length = 214
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+L+ A I F+ L+LR VLG + G E P + + +G + G D
Sbjct: 1 MLQLLVLAGIAIFLLLRLRSVLGTRDGFEPP-----RSELPGAPDRRQGFEVIEGGPDLD 55
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D + P + + ++ + F +FL+ +R +YE I+ SF GK+ I
Sbjct: 56 ITDHV----PEDSDAAAALAEMKRIEPSFSVSEFLSGSRQAYEWILMSFENGKLDEIVPF 111
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISA 187
+ V++ F + R+ V++ G+ D+ +I+A++++ T IT++ +G+ S
Sbjct: 112 LSPDVHEAFAQVIDARQEKNLTVEAEFYGVRDVTLIDAALDDTTKAAEITVKFLGELSSV 171
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++ +I P + D WTF R + +PNW L++T
Sbjct: 172 VRNEQGEIIEGTPGEPKRQKDTWTFERVMGSDDPNWRLVAT 212
>gi|288959728|ref|YP_003450069.1| mitochondrial import inner membrane translocase [Azospirillum sp.
B510]
gi|288912036|dbj|BAI73525.1| mitochondrial import inner membrane translocase [Azospirillum sp.
B510]
Length = 231
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
I++FA I F+ +LR VLG++TG E+ FS +K D + + D
Sbjct: 8 IEIVIFAMIAAFLVYRLRSVLGRRTGEERQRPNPFSAAPGAAKPDNVVSLPQRNQPRPDA 67
Query: 71 LDSINELFP-IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + L + I + FD K FL+ A+ ++ IVD+F G + L
Sbjct: 68 APGQDVMASDEPLSLAASIDQIRAADPTFDEKHFLDGAKAAFAMIVDAFARGDTATLRPL 127
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE-ENTVYITIRIVGQFISAS 188
+ VY F + R++ + ++ + + + +++ A ++ T +T+R+V ++
Sbjct: 128 LADDVYDGFARVIRDRQAAGEQHETRIEQVREAEVVEAKLDAGRTARVTVRLVSDQVNVV 187
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D++ ++ DP+ + D+WTF R++ +PNW L+ + +
Sbjct: 188 RDRNGAVVDGDPKALVENTDVWTFARDLRSRDPNWALVEVRPVQ 231
>gi|83594937|ref|YP_428689.1| hypothetical protein Rru_A3608 [Rhodospirillum rubrum ATCC 11170]
gi|83577851|gb|ABC24402.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 219
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 114/222 (51%), Gaps = 11/222 (4%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
I+ FA I F+ L+LR VLG++TG E+ F+ + + +I L K
Sbjct: 8 IDIIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQ----PESAQDNVIDLSGRK---- 59
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
P L + I F P+ FL A+ ++E I+ ++ +G ++ L+
Sbjct: 60 ---AVAGRPGDGTLAGGLTQIQLTDPSFSPEGFLIGAKAAFEMILMAYAKGDKAVLKPLL 116
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V+Q+F+ ++ R+ ++ +++ LVG ++I+ A ++ +T++ V + +++ D
Sbjct: 117 AGEVFQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDALVTVKFVTEQVNSVRD 176
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
K + ++ +P +V DIWTF R+ ++PNW LI+T++ E
Sbjct: 177 KSDTVVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPE 218
>gi|319898295|ref|YP_004158388.1| hypothetical protein BARCL_0116 [Bartonella clarridgeiae 73]
gi|319402259|emb|CBI75797.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 230
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
R VLGK+ G EKP +SG + D + +K + I+ + P G+
Sbjct: 22 RNVLGKRIGFEKPPFDSYSGYPKKQIEVETTDNIVSLPDQSSSQKSDFSEIDAIAPEGSE 81
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
LN +R I F P+ F+N + YE I+ +F +G +++ + S V++ F ++
Sbjct: 82 LNVSLRTIRQFDPSFSPRFFMNGVQIVYEMIMTAFAQGDRVKLKEHLSSDVFESFCAAIE 141
Query: 144 TRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
R+ N + ++ + VGI+ ++ I A +++ ++T+RIV + ISA+Y++ I +PE
Sbjct: 142 QREKNNERIQFTFVGINRIEFIAAEMQKKEAFLTVRIVSEMISATYNEQEECIDGNPEAI 201
Query: 204 GKVIDIWTFVRNIPPSNPNWVLISTK 229
++ DIWTFVRN +PNW L +T+
Sbjct: 202 IEIRDIWTFVRNTTSQSPNWKLFATE 227
>gi|332186336|ref|ZP_08388081.1| tim44-like domain protein [Sphingomonas sp. S17]
gi|332013704|gb|EGI55764.1| tim44-like domain protein [Sphingomonas sp. S17]
Length = 257
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ++L A + F+ L+L VLGK+TG+E+ S D + L + +
Sbjct: 43 LFYVVLLAMVALFLALRLYSVLGKRTGHEQQPLPR-------SADDRARPVVLPRAAEPA 95
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ I R + +R I++ FD FL A+++Y +++F++G A+ +L
Sbjct: 96 QSPAPVANRNIDPRAEQGLRAIIAGEPGFDVNQFLGGAQSAYRMTLEAFWKGDEQALAEL 155
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
VD+ V F ++++ R+ + + + L+ +D KI+++ + IT+R ++ +
Sbjct: 156 VDTDVLGAFAEAIAQRQEAGETLDNRLIRVDSAKIVDSQLAGRDARITVRFDADIVAVTR 215
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D + +I+ + DIWTF R + +PNW L+ T
Sbjct: 216 DAEGQVIAGSLSDAVETHDIWTFARTLKSGDPNWKLVDTDEA 257
>gi|319405014|emb|CBI78623.1| Tim44 domain protein [Bartonella sp. AR 15-3]
Length = 230
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 4/206 (1%)
Query: 28 RGVLGKKTGNEKPFSGFFS--GKYVFSKRDERGIITLGKGK--KKDNLDSINELFPIGTR 83
R VLGK+ G EKP +S K + I++L KK+N IN + P +
Sbjct: 22 RNVLGKRIGFEKPPFDSYSKHSKKQIERETSDNIVSLPDQSSSKKNNFSEINTIAPEKSA 81
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
LN +R I + F P+ F+N + YE I+ +F +G +++ + S V++ F +++
Sbjct: 82 LNSGLRAISLADSSFSPQFFINGVQIVYEIIMTAFAQGNRDQLKEHLSSDVFESFCEAIE 141
Query: 144 TRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
R+ N + ++ + VGI+ ++ I A +++ ++T+RIV + ISA+Y++ I DPE
Sbjct: 142 QREKNNERIQFTFVGINKIEFIAAEMQKEEAFLTVRIVSEIISATYNEREEYIDGDPEAI 201
Query: 204 GKVIDIWTFVRNIPPSNPNWVLISTK 229
++ DIWTFVRN NPNW L +T+
Sbjct: 202 IEIRDIWTFVRNTTSKNPNWKLFATE 227
>gi|154251701|ref|YP_001412525.1| import inner membrane translocase subunit Tim44 [Parvibaculum
lavamentivorans DS-1]
gi|154155651|gb|ABS62868.1| import inner membrane translocase subunit Tim44 [Parvibaculum
lavamentivorans DS-1]
Length = 247
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 23 VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS--------- 73
VFL+LR VLG++TG+E+P +S ++TL K + D S
Sbjct: 19 VFLKLRSVLGRRTGHERPPYDPYSENPAPG---NDKVVTLPKRGRTDAPASGARDRVIDA 75
Query: 74 -------------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ G+ L + I FD + FL+ AR +YE IV +F
Sbjct: 76 AGDPFANAGARFRWRGVTEEGSPLAGALDAIADADRTFDTESFLSGARMAYEMIVTAFAA 135
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G ++ L+ VY F ++S R+ + S +GID I S++ +T+
Sbjct: 136 GDRATLKPLLSDDVYASFEGAISAREKAGLQIDQSFIGIDKAAITGGSLDGTRARLTVSF 195
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ S++ + D +++ DP ++ D+WTF R++ +PNW L++T
Sbjct: 196 RSELTSSTKNSDGVVVEGDPVTVREITDVWTFERDLRNRDPNWKLVATGAA 246
>gi|85709415|ref|ZP_01040480.1| hypothetical protein NAP1_11058 [Erythrobacter sp. NAP1]
gi|85688125|gb|EAQ28129.1| hypothetical protein NAP1_11058 [Erythrobacter sp. NAP1]
Length = 219
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
I++ A I F+ L+L VLG++ +E+ ++ + + G+ +
Sbjct: 2 ILEIVILAMIAAFLGLRLYSVLGRRAEHEEESVP---QRFDAGDKPQAQPPIAGQPAQPA 58
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
SI EL + + + +R+I S FD F++ A+ +YE +++ F+EG + +L
Sbjct: 59 PQRSI-ELEGVMPAVERGVREIASADRSFDIGQFMDGAKGAYEMVLEGFWEGDKDTLREL 117
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
D VY F+ ++ R+ + + L+ I++ +I +AS++ I + V + +
Sbjct: 118 CDDDVYAGFSAAIDAREEAGHTLDNKLIRIEETRIHSASMDGRMARIAVLFVADIAAVTR 177
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
DKD ++++ + + D+WTF RNI +PNWVL T G
Sbjct: 178 DKDGVVVAGSLDDAIESRDVWTFSRNIGSRDPNWVLDETDEG 219
>gi|119385510|ref|YP_916566.1| import inner membrane translocase, subunit Tim44 [Paracoccus
denitrificans PD1222]
gi|119375277|gb|ABL70870.1| import inner membrane translocase, subunit Tim44 [Paracoccus
denitrificans PD1222]
Length = 218
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + +L+ A I F+ L+LRGVLG + G E P + + +R + G
Sbjct: 1 MSNPLLQLLVLAAIAVFLILRLRGVLGTRDGFESPR--------IPEEPVQRRRFDVIDG 52
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ I + G+ K + ++ + DF FL+ A+++YE I+ +F G +
Sbjct: 53 TAEAGDSDITDHAEPGSPAAKALAEMKRIEPDFAVGPFLSGAKSAYEMILMAFERGDLSE 112
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQ 183
+ + V + F + RK+ ++ +G + + A T +++R VG+
Sbjct: 113 VRGFLAPPVAEAFESVIEDRKARNLTTEAQFLGTRETALAGAEFTPATGMAELSVRFVGE 172
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
I A+ D D +I DP+ K D WTF R + +PNW L++T
Sbjct: 173 MIVATRDADGNVIEGDPKAARKQRDTWTFARRMGQDDPNWQLVAT 217
>gi|21328722|gb|AAM48728.1| conserved hypothetical protein [uncultured marine proteobacterium]
Length = 216
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+L A I ++ L+LRGVLG + G+E P + + D + + G +D
Sbjct: 3 IIQLLALAGIAIYLILKLRGVLGTRDGHEGPRANIVARAD-----DRPKLEVIDGGPDQD 57
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D E + + + + F +FL ++++YE I+ +F G + +++
Sbjct: 58 ITDHAAE----DSDAARALLGMKHAEPSFSVTEFLYGSKSAYEMILMAFENGDLGSVKAF 113
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISA 187
++ VY F + RK+ ++++ +G+ D ++ A+ + T I +R + + S
Sbjct: 114 LNQDVYDAFASVVEARKAQGLSIEAEFIGVRDTGLMGATFDPKTNAAEIDVRFICELTSV 173
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D +I + + D+WTF R + +PNW LI+T
Sbjct: 174 LRNSDGDIIEGNETEVKRQRDVWTFGRTMGADDPNWQLIAT 214
>gi|103487499|ref|YP_617060.1| import inner membrane translocase, subunit Tim44 [Sphingopyxis
alaskensis RB2256]
gi|98977576|gb|ABF53727.1| import inner membrane translocase, subunit Tim44 [Sphingopyxis
alaskensis RB2256]
Length = 221
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F I+L A I F+ ++L VLGK+TG+E+ R I L G+
Sbjct: 4 FSIVLLAMIAAFLGMRLYSVLGKRTGHEQEPVLPRRDD-----RSAPAPIRLDDGETSAI 58
Query: 71 LDSINELFPI--GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ S + + +R +++ +FD F+ AR +Y I+++F++G +
Sbjct: 59 VTSATDTAGLVYEPSAEAGLRQLLANDRNFDAGRFMEGARAAYRMILEAFWKGDRETLRD 118
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L D Y F +++ R++ + +++ L+ ID KI A + IT+R + +
Sbjct: 119 LCDDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELNRGEARITVRYHADISAIT 178
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D D LI+ + D+WTF R I ++PNW+L +
Sbjct: 179 RDADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLLDEAESA 221
>gi|114769764|ref|ZP_01447374.1| transporter, Tim44 family protein [alpha proteobacterium HTCC2255]
gi|114549469|gb|EAU52351.1| transporter, Tim44 family protein [alpha proteobacterium HTCC2255]
Length = 218
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M F +++ I FV L+LR VLG ++G E + + + +E
Sbjct: 1 MSDPMFQLVILGVIALFVILRLRSVLGTRSGFEPTNVPKPTFQKEKTPTEEN-------- 52
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
I + + + K + + ++F +F+ A +YE I+ +F EG
Sbjct: 53 -DNKIDRDIADYVSVDSPSGKALSQMKKAESNFLVTEFIQGAGQAYEMILIAFEEGDRDG 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQ 183
+ + VY F ++ R+ + N+ ++ +G+ ++K+ +A + IT+ +V +
Sbjct: 112 LRPFLADDVYDSFESVITEREKAQLNIDATFIGLREIKLTSAEYDWRAKEGEITLSLVAE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + ++ +I D K D WTF R + NPNW L++T
Sbjct: 172 LTTVVKNINDEIIEGDKNKIKKQKDTWTFSRIMGNDNPNWTLVAT 216
>gi|161170260|gb|ABX59230.1| uncharacterized protein conserved in bacteria [uncultured marine
bacterium EB000_55B11]
gi|297183789|gb|ADI19912.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 218
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M F +++ I FV L+LR VLG ++G E + + + +E
Sbjct: 1 MSDPMFQLVILGVIALFVILRLRSVLGTRSGFEPTNVPKPTFQKEKTPTEEN-------- 52
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
I + + + K + + ++F +F+ A +YE I+ +F EG
Sbjct: 53 -DNKIDRDIADYVSVDSSSGKALSQMKKAESNFLVTEFIQGAGQAYEMILIAFEEGDRDG 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQ 183
+ + VY F ++ R+ + N+ ++ +G+ ++K+ +A + IT+ +V +
Sbjct: 112 LRPFLADDVYDSFESVITEREKAQLNIDATFIGLREIKLTSAEYDWRAKEGEITLSLVAE 171
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + ++ +I D K D WTF R + NPNW L++T
Sbjct: 172 LTTVVKNINDEIIEGDKNKIKKQKDTWTFSRIMGNDNPNWTLVAT 216
>gi|94498195|ref|ZP_01304756.1| import inner membrane translocase, subunit Tim44 [Sphingomonas sp.
SKA58]
gi|94422325|gb|EAT07365.1| import inner membrane translocase, subunit Tim44 [Sphingomonas sp.
SKA58]
Length = 217
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
++I++ A I F+ L+L VLGK+TG+E+ + + + G G G D
Sbjct: 1 MYVIVILAMIAGFLALRLYSVLGKRTGHEQEPALRPAEDRAKVTVLQPGPTNHGGG---D 57
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ L G +R +++ +FD F+ AR++Y+ ++++F+ G + L
Sbjct: 58 TVRLAEGLIAPGAET--GVRTLIATDRNFDVPQFVEGARSAYKMVLEAFWRGDREELAWL 115
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
D+ V F D+++ R+++ + + LV I+ +II A++ + T I +R + +
Sbjct: 116 CDADVLASFEDAIAAREADGHVLDNRLVRIEKAQIIEATVRDGTAEIAMRFEADIAAVTR 175
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D+D +I+ DIWTF R+I ++PNW L T
Sbjct: 176 DRDGNVIAGSMTDAIDTKDIWTFTRDIRSADPNWKLSETDEA 217
>gi|296283090|ref|ZP_06861088.1| hypothetical protein CbatJ_05690 [Citromicrobium bathyomarinum
JL354]
Length = 220
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ I++ A I F+ L+L VLG++ +E+ + T +
Sbjct: 2 IYEIVILAMIAVFLGLRLYSVLGRRAEHEEEPVPHRFDAKDKAGLAAAPQTTQAPPRAVT 61
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++ ++ P+ + + ++ I++ FD FL A+ +Y I++++++G + L
Sbjct: 62 EQEAKPDVLPV---VERGVQSIIAADRGFDITSFLEGAKGAYGMILEAYWKGDKETLRDL 118
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
D VYQ F ++ R+ + + + L+ I+D I +A +E IT+R V + ++
Sbjct: 119 CDESVYQGFAQAIDAREEAGETLDNRLIRIEDATIRDAELERKEARITVRFVADIAAVTH 178
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D+D +++ + + DIWTF R + P+W L+ T G
Sbjct: 179 DRDGNMVAGSLDDAIESRDIWTFARRVDSRTPDWQLVETDEG 220
>gi|84514927|ref|ZP_01002290.1| hypothetical protein SKA53_11923 [Loktanella vestfoldensis SKA53]
gi|84511086|gb|EAQ07540.1| hypothetical protein SKA53_11923 [Loktanella vestfoldensis SKA53]
Length = 211
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 15 LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI 74
+ A I F+ L+LRGVLG + G EKP + + R + + G D D +
Sbjct: 2 VLAGIAVFLILRLRGVLGTREGFEKPAVT----RQETTPRRKHDFDVIEGGPDLDITDHV 57
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
K + + V DF+ +FL AR +YE I+ +F + +I + V
Sbjct: 58 QADS----AAAKALAAMKRVDPDFNVTEFLGGARGAYEMILMAFENSDLDSIVPFISHDV 113
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYDKD 192
Y+ F + R+ V +S +GI DM + +A +E T +++R + S + +
Sbjct: 114 YEAFASVVDDRQRQGLTVTASFIGISDMTLAHAEFDEATKEGEVSVRFKSEMTSVVRNAE 173
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++ + +++D WTF R + +PNW L++T
Sbjct: 174 GEVVEGSTKEIKRLVDTWTFARKMDAGDPNWKLVAT 209
>gi|323135818|ref|ZP_08070901.1| import inner membrane translocase subunit Tim44 [Methylocystis sp.
ATCC 49242]
gi|322398909|gb|EFY01428.1| import inner membrane translocase subunit Tim44 [Methylocystis sp.
ATCC 49242]
Length = 233
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 6/230 (2%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFS----KRDERGIITL 62
+ D +++FA + FV +LR VLG + + P F + +
Sbjct: 6 EPFDPSLVVFAALAVFVIWKLRSVLGVRVDRDAPPPAQFQPRRPSPAGATPLPGAAPLDD 65
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G +++ S + G + I + FD + FL+ AR +Y+ IV +F G
Sbjct: 66 GAAARRNVPASWEGVAEKGGAAASGLDAIAAADPRFDGQAFLDGARRAYDMIVSAFARGD 125
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ L+ V+ F ++ R+ N + ++++++ ID + +A IT+R
Sbjct: 126 RDQLRPLLSKEVFDGFAAEIARREENGETMETAVIAIDSALVESARAAPRLNEITVRFAT 185
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ ++ +K+ I V+++WTF R+ S+PNW L++T+ E
Sbjct: 186 RLMNLRRNKEGETIEGGHT--IPVVELWTFARDPRASDPNWKLVATRPAE 233
>gi|307294078|ref|ZP_07573922.1| import inner membrane translocase subunit Tim44 [Sphingobium
chlorophenolicum L-1]
gi|306880229|gb|EFN11446.1| import inner membrane translocase subunit Tim44 [Sphingobium
chlorophenolicum L-1]
Length = 218
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
++I++ A I F+ L+L VLGK+TG+E+ + + + + +T G D
Sbjct: 1 MYVIVILAMIAGFLALRLYSVLGKRTGHEQEPALRPAEERAKVTIVQPRPVTEMAG---D 57
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++ + L G +R +++ +FD F+ A+++Y ++++F+ G +E L
Sbjct: 58 SVRLADGLIAPGGE--AGVRALIAADRNFDVPQFVEGAKSAYRMVLEAFWRGDRQELEWL 115
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
D+ V F D+++ R++ + + LV I+ ++I++A + I++R + +
Sbjct: 116 CDADVLASFQDAITAREAEGHVLDNRLVRIEKVQIVDAGVTGRMAEISLRFEADIAAVTR 175
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D+D +++ DIWTF R++ ++PNW L T
Sbjct: 176 DRDGNVVAGSLTDAVGTNDIWTFTRDLRSTDPNWKLSETDEA 217
>gi|89052682|ref|YP_508133.1| import inner membrane translocase, subunit Tim44 [Jannaschia sp.
CCS1]
gi|88862231|gb|ABD53108.1| import inner membrane translocase subunit Tim44 [Jannaschia sp.
CCS1]
Length = 235
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 17 AFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINE 76
A I F+ L+LR VLG + G EKP S + R + G D L +
Sbjct: 28 AGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDV----RRDFEVIEGGPDDDIL----D 79
Query: 77 LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
G+ K + + F +FL AR +YE I+ +F G V + + V +
Sbjct: 80 HVDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLE 139
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYDKDNL 194
F + R ++++ VG+ ++ + A+ + +T+R +G+ S + D
Sbjct: 140 TFETVIDQRNEQGLSIEAEFVGVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGE 199
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+I D + D+WTF R + +PNW L++T
Sbjct: 200 IIEGDATEIKRQRDVWTFARKMGADDPNWALVATD 234
>gi|87198608|ref|YP_495865.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
aromaticivorans DSM 12444]
gi|87134289|gb|ABD25031.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
aromaticivorans DSM 12444]
Length = 247
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKK-TGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
I++ A I F+ L+L VLG++ +E+P +K + G + + +
Sbjct: 19 IVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAET 78
Query: 69 DNLDS------INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
L E +R I++ FD FL A+ +Y I+++F+ G
Sbjct: 79 GALAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGD 138
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ +L D+ VY+ F ++ R + + + + L+ I++ +II ASIE T I +R +
Sbjct: 139 KEELAQLCDADVYEGFASAIDARANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLA 198
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
S + + + +++ + D+WTF R++ +P+W+L T
Sbjct: 199 DIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWLLDETDEA 247
>gi|148259158|ref|YP_001233285.1| import inner membrane translocase, subunit Tim44 [Acidiphilium
cryptum JF-5]
gi|326402311|ref|YP_004282392.1| putative transporter [Acidiphilium multivorum AIU301]
gi|146400839|gb|ABQ29366.1| import inner membrane translocase, subunit Tim44 [Acidiphilium
cryptum JF-5]
gi|325049172|dbj|BAJ79510.1| putative transporter [Acidiphilium multivorum AIU301]
Length = 221
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
I+L A + F+ L+LR VLG++TG E+P + + G + G + +
Sbjct: 7 VDIVLLALVAGFLVLRLRSVLGRRTGYERPPMPEPTAAGGMQRP--GGPVIEGVAEPPRS 64
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ T + + + I FDP FL+ A S+ IV +F G + A+ L+
Sbjct: 65 TRPVPAPH---TVVGQTLARIAQAERGFDPARFLDGAEASFRRIVLAFAAGDLAALRPLL 121
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V+ F +++ R + + +V I + I A + I +R V + + D
Sbjct: 122 TPGVFATFEQAVAQRAEAGETQHTEIVRIVEATIDEAELLGGEAVIVVRFVSDQQNYTRD 181
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ +I+ E +++D+W+F +++ ++P W L + + G
Sbjct: 182 RQGQVIAG-TEAMTEIVDLWSFEKSLGAADPTWRLAAARSG 221
>gi|296444992|ref|ZP_06886953.1| import inner membrane translocase subunit Tim44 [Methylosinus
trichosporium OB3b]
gi|296257413|gb|EFH04479.1| import inner membrane translocase subunit Tim44 [Methylosinus
trichosporium OB3b]
Length = 229
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK-- 64
++ D IL+ A + FV +L VLG +T E + V S G++
Sbjct: 5 EAFDPSILVLAALAAFVVWKLWSVLGVRTDRE-----NSAAGRVPSPGRRFGVVPPPAST 59
Query: 65 --GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ + L G++ + + + FD K+FL A+ +YE +V+SF +G
Sbjct: 60 GFAAPPQDQSRWDGLAEPGSKGWAGLDALAAADRGFDAKNFLEGAKKAYELVVESFAKGD 119
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ L+ + VY F +++ R+ ++ ++ +V I+ + +A +E + IR V
Sbjct: 120 REMLRNLLANDVYDSFAKAIAAREQRGESAEARVVAIETASVEDAQVERGRAQVAIRFVV 179
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ISA D +I D E + D+WTF R+I +PNW L++T+
Sbjct: 180 KLISARRDSAGEVIEGDVERPIDITDLWTFARDISSRDPNWKLVATET 227
>gi|85374926|ref|YP_458988.1| hypothetical protein ELI_10495 [Erythrobacter litoralis HTCC2594]
gi|84788009|gb|ABC64191.1| hypothetical protein ELI_10495 [Erythrobacter litoralis HTCC2594]
Length = 215
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 10/223 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPF-SGFFSGKYVFSKRDERGIITLGKGKKK 68
F I++ A I F+ ++L VLG++ E+ + + + + + +
Sbjct: 2 IFEIVILAMIAAFLGMRLYSVLGQRAEQEEEVIPNRYDAGDQPQQAAPKPATQVVELQPN 61
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
NL + + +R I + FD FL A+ +Y +++++++G + +
Sbjct: 62 PNLHP---------SVEQGVRAIAAADRGFDVSSFLEGAKGAYGMVLEAYWKGDKETLRE 112
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L D VY F ++ R+ + + ++L+ I+D I +A ++ T +T+R V + +
Sbjct: 113 LCDDDVYASFAGAIDAREEAGEALDNTLIRIEDAVIRDAEMDGRTARVTVRFVADIAAVT 172
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
DKD +I+ + + DIWTF RN+ + P+WVL T G
Sbjct: 173 RDKDGNVIAGSLDDAIESRDIWTFSRNVDAAGPDWVLDETDEG 215
>gi|46204686|ref|ZP_00049618.2| COG4395: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 223
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSG---KYVFSKRDERGIITL 62
DS D L+F + FV +LR VLG+KTG E+ + + + ++ L
Sbjct: 2 QDSFDVTTLIFLALAVFVIWRLRSVLGQKTGAERSPFRPVERNRTEPPAGRAEGDNVVRL 61
Query: 63 GKGKKKDNL-------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV 115
+ + G+ + + + +V V FDP+ FL A+ +YE IV
Sbjct: 62 PGADRAQAAAAVQTVTRDWRGIAEPGSAVARGLEQVVQVEPGFDPRTFLEGAKGAYEIIV 121
Query: 116 DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY 175
+F +G + L+ VY F+ +S R+ + V+++ + ID +I+ ++
Sbjct: 122 TAFAQGDRKTLRPLLSREVYDGFDRVISERERRRETVETTFISIDKAEIVAIEVKNRAAQ 181
Query: 176 ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP 217
IT+R + I+A+ D D +I + E +V D+WTF R +
Sbjct: 182 ITVRFLSNLITATRDADGKVIDGNAETGVEVPDVWTFARTLG 223
>gi|310817171|ref|YP_003965135.1| transporter, Tim44 family protein [Ketogulonicigenium vulgare Y25]
gi|308755906|gb|ADO43835.1| transporter, Tim44 family protein [Ketogulonicigenium vulgare Y25]
Length = 219
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 26 QLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLN 85
+LR VLG + G EKP + R + + G +D +D + P G+
Sbjct: 21 RLRSVLGSRDGFEKPIAQV----PPEEARKRPTLDVIEGGPDRDIVDHV----PEGSATA 72
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
++ + F +FL+ +R +YE I+ +F G + + + V+ F ++ R
Sbjct: 73 LIIGQMKKAEPSFSLSEFLSGSRGAYEMILMAFERGDIEPVRGFIAPEVFDAFAGVIADR 132
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
++ V++ +GI D+ + +A+ + + +R V + S D D ++ P++
Sbjct: 133 QARGLKVEAHFIGIRDVGLDDAAFDPATGEAELVVRFVAEMTSVVRDADGTVVEGAPDVA 192
Query: 204 GKVIDIWTFVRNIPPSNPNWVLIST 228
+ D+WTF R + S+PNW L++T
Sbjct: 193 KRQKDVWTFARKMGASDPNWTLVAT 217
>gi|114328998|ref|YP_746155.1| transporter [Granulibacter bethesdensis CGDNIH1]
gi|114317172|gb|ABI63232.1| transporter [Granulibacter bethesdensis CGDNIH1]
Length = 231
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
++L I F+ L+LR VLG++ G E+P G+ G+ +
Sbjct: 14 VDLVLLGMIAVFLVLRLRSVLGRRVGFERPEVPANQGQT---GNRIPGLPVRLRRPDAAV 70
Query: 71 LDSINELFP-IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++ + P + +V+ + V FD FLN A ++ IV ++ +G+ A+ L
Sbjct: 71 AEARTYVLPDASSPTGQVLARMKEVDRSFDAVRFLNNAEQAFRVIVTAYAQGEREALRPL 130
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + F ++ R+ + ++ + I D++I NA +E+ +TIR V +
Sbjct: 131 LTEATFTIFCQAIDAREQDGARQQTEIQSIRDIRIENARLEQTQAALTIRFVSDQHNVML 190
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++ + E +++D+WTF R++ +P W L T
Sbjct: 191 NRTGEPVEG-VEGLTEIVDVWTFERDLASRDPTWRLSGTDNA 231
>gi|148556731|ref|YP_001264313.1| import inner membrane translocase subunit Tim44 [Sphingomonas
wittichii RW1]
gi|148501921|gb|ABQ70175.1| import inner membrane translocase, subunit Tim44 [Sphingomonas
wittichii RW1]
Length = 226
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 11/229 (4%)
Query: 5 KMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK 64
++ I++ A + FV +L VLG++TG+E+ + +
Sbjct: 6 RIGGPVTTIVILAMVFLFVAFRLWSVLGRRTGHEQ---------TIARPAEAAPAPIGAG 56
Query: 65 GKKKDNLDSINELFP--IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+N + P + R +R I S FD FL AR++Y I+++++ G
Sbjct: 57 RSLPENATPVLPAKPAVVEPRAEAGVRAIQSADGGFDAAQFLEGARSAYRMILEAYWRGD 116
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
A+ +L D VY+ F +++ R+ + + + LV I+ I A + T +T+R
Sbjct: 117 EEALRRLTDDDVYEAFAAAITERREANEVLDNRLVSIESAVIEQARMNGQTANVTVRFDA 176
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + D + +++ D+WTF R++ +PNW L+ T
Sbjct: 177 DIAAVTRDGEGNVVAGSLTDAVPTHDVWTFSRHVRSDDPNWTLVETDEA 225
>gi|300024770|ref|YP_003757381.1| import inner membrane translocase subunit Tim44 [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526591|gb|ADJ25060.1| import inner membrane translocase subunit Tim44 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 251
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 23/246 (9%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKR-----DERGIITL 62
D + L+ + ++LR VLG +T +E+ + + S+R +IT+
Sbjct: 5 FDLITLIALIVAVAAIIKLRSVLGHRTDEDEQRVERLRAREREASQRAGADAPSADVITM 64
Query: 63 GKGKKKDNL-------------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARN 109
+ + IN + + + + +FDP+ F+ A
Sbjct: 65 PRRDRDAAPAAPAAEAAGPSAETRINAYPVSNPDVTAGLLQVAKLDPEFDPESFVTGAGR 124
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+YE IV +F EG ++ L+ V+ F+ +++ R++ + + VGI I++A +
Sbjct: 125 AYEMIVSAFAEGNRRMLKDLLSKDVFDGFSSAIADREARGEVLDQQFVGIKKADIVDAEV 184
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP----SNPNWVL 225
+ T +T+R + + ISA+ DK +I+ D + V DIW F R++ SNPNW L
Sbjct: 185 KNGTAALTVRFISELISATRDKAGEVIAGDAQKIKDVTDIWIFSRDVSSAKALSNPNWRL 244
Query: 226 ISTKLG 231
++T+
Sbjct: 245 VATQAP 250
>gi|294010816|ref|YP_003544276.1| hypothetical protein SJA_C1-08300 [Sphingobium japonicum UT26S]
gi|292674146|dbj|BAI95664.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 218
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
++I++ A I F+ L+L VLGK+TG+E+ + + + + + G D
Sbjct: 1 MYVIVILAMIAGFLALRLYSVLGKRTGHEQEPALRPAEERAKVTIVQPRPVPEMAG---D 57
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++ L G +R +++ FD F+ A+ +Y+ ++++F+ G +E L
Sbjct: 58 SVRLSEGLIAPGGE--AGVRALIAADRSFDVPQFVEGAKAAYKMVLEAFWRGDRQELEWL 115
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
D+ V F ++++ R++ + + LV I+ ++I++A + I++R + +
Sbjct: 116 CDADVLASFEEAIAAREAEGHVLDNRLVRIEKVQIVDAGVTGRMAEISLRFEADIAAVTR 175
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D+D +++ DIWTF R++ ++PNW L T
Sbjct: 176 DRDGNVVAGSLTDAVGTNDIWTFTRDLRSTDPNWKLSETDEA 217
>gi|83944953|ref|ZP_00957319.1| hypothetical protein OA2633_09999 [Oceanicaulis alexandrii
HTCC2633]
gi|83851735|gb|EAP89590.1| hypothetical protein OA2633_09999 [Oceanicaulis alexandrii
HTCC2633]
Length = 219
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 5/222 (2%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
IL FA + F+ ++L VLGK +G + +R E + +
Sbjct: 3 ILQILFFAGLAVFLGVRLYMVLGKSSGR-----AAEDVEREQRERAEAAGMGAPPPSMRP 57
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D + + I FDP +F AR +YE IV ++ +G A+E L
Sbjct: 58 QADETPFAAQFAGPAGEGLMQIAQHDPAFDPDEFRKGARAAYEMIVLAYAKGDREALEPL 117
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ RV + ++ +++ R+ V + + I +I AS+ +N + I + S +
Sbjct: 118 LTERVKKAYDQAIAAREEKNWTVTTEIDRIKSAEISEASLNDNRAKVKIAFSVELASETR 177
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ ++ D V +IW+F R++ NPNW L K
Sbjct: 178 NAQGDVVEGDLTTLKTVDEIWSFERDVTSENPNWRLSGVKPA 219
>gi|326386373|ref|ZP_08207996.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209034|gb|EGD59828.1| import inner membrane translocase, subunit Tim44 [Novosphingobium
nitrogenifigens DSM 19370]
Length = 218
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
Query: 16 FAFITFFVFLQLRGVLGKK-TGNEKPFSGFFSGKYVFSK-RDERGIITLGKGKKKDNLDS 73
A I F+ L+L VLG++ G+++P + R +
Sbjct: 1 MAMIALFLGLRLYAVLGRRAEGSDEPLRRRVEQPDPQAALRAMPSKLPEKPAMTGRPSLP 60
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
E +R I++ FD FL A+ +Y ++D+F+ G A+ +L +
Sbjct: 61 TAEPSAFDAGAETGIRAIIAADRRFDVALFLTGAKAAYGMVLDAFWRGDKDALAQLCERS 120
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
VY+ F ++ RK + V + L+ +DD +I++A I +R V + + + +
Sbjct: 121 VYESFAAAIDARKQAGETVDARLIRVDDARIVSADFNAPVARIAVRFVADVATVTRNTEG 180
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+++ + + D+WTF R++ +P+W L T G
Sbjct: 181 TVVAGSLDDAIESRDLWTFSRDLTSRDPDWQLDETDQG 218
>gi|294085200|ref|YP_003551960.1| hypothetical protein SAR116_1633 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664775|gb|ADE39876.1| hypothetical protein SAR116_1633 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 212
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
I++FA I + L+L+ VLG++TG E+P K ++ ++ K +
Sbjct: 2 PYIDIIIFAVIAVLLVLRLKSVLGQRTGFEQPQD-----KKPMQAANDGDVVPFPSNKDE 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
G + + +F FL A ++E ++ ++ EG + +++
Sbjct: 57 -----------TGALNGHGIATLRKADRNFTEAAFLGGATQAFEMVLRAYAEGDLAQLKR 105
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ + Q F S+ R +N++++ L I + I+N ++ ++ +T+ +
Sbjct: 106 LLGYDLLQSFTQSIQKRNANKESLTIDLENIKEASILNIAVVDSVAAVTVHFHSVQTRIA 165
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D D +I D +++DIWTF R++ ++PNW L+ T+ +
Sbjct: 166 RDADENIIDEDESQSQEIVDIWTFERDLTLNDPNWKLVETETAD 209
>gi|149185516|ref|ZP_01863832.1| hypothetical protein ED21_20864 [Erythrobacter sp. SD-21]
gi|148830736|gb|EDL49171.1| hypothetical protein ED21_20864 [Erythrobacter sp. SD-21]
Length = 218
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 7/223 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEK-PFSGFFSGKYVFSKRDERGIITLGKGKKK 68
+ I++ A I F+ L+L VLG+++ +E+ P F ER + +
Sbjct: 2 IYEIVILAAIAAFLGLRLYSVLGERSEHEEEPARHRFDAPDAVPPAAERPAAPARESVRL 61
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++D+ + +R I S FD FL A+ +Y I+++F++G +
Sbjct: 62 RSVDN------ASSANENAIRAIASADPRFDLLAFLEGAKAAYGMILEAFWKGDKDTLRD 115
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L D VY F+ ++ R + +++++ LV I+D I +A ++ T I++ V S +
Sbjct: 116 LTDDDVYAGFSGAIDARDTAGESLENRLVRIEDATIHSAELDNRTARISVLFVSDIASLT 175
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
DKD +I+ + + DIWTF RN+ +PNWVL T G
Sbjct: 176 RDKDGNVIAGSLDDAVESRDIWTFTRNVDAMDPNWVLDETDQG 218
>gi|222474811|ref|YP_002563226.1| hypothetical protein AMF_080 [Anaplasma marginale str. Florida]
gi|255002781|ref|ZP_05277745.1| hypothetical protein AmarPR_00408 [Anaplasma marginale str. Puerto
Rico]
gi|222418947|gb|ACM48970.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 219
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G + ++AF+ F+F +L G LGK + S + + + G I +
Sbjct: 2 GMVELAIYAFVAAFIFFRLYGSLGKASSVNFQPSAIYPEQAGGEQAASDGSIN----SQD 57
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ S+ +++ V I F K F+ + ++EAIV + +G +
Sbjct: 58 IPVSSVVADCASVEQISSVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGNAEFLSS 117
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V + I+
Sbjct: 118 LLSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVTEQINVV 177
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D ++ + D W F R+I S W L ST
Sbjct: 178 RDAGGQVVDGSTSKVNTIEDTWKFARDITTSGRRWYLTSTSA 219
>gi|254994672|ref|ZP_05276862.1| hypothetical protein AmarM_00445 [Anaplasma marginale str.
Mississippi]
Length = 217
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 4/221 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L G LGK + S + + + G I +
Sbjct: 1 MVELAIYAFVAAFIFFRLYGSLGKASSVNFQPSAIYPEQAGGEQAASDGSIN----SQDI 56
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ S+ ++ V I F K F+ + ++EAIV + +G + L
Sbjct: 57 PVSSVVADCASVEQIASVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGNAEFLSSL 116
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V + I+
Sbjct: 117 LSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVTEQINVVR 176
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D ++ + D W F R+I S W L ST
Sbjct: 177 DAGGQVVDGSTSKVNTIEDTWKFERDITTSGRRWYLTSTSA 217
>gi|73667391|ref|YP_303407.1| membrane translocase, subunit Tim44 [Ehrlichia canis str. Jake]
gi|72394532|gb|AAZ68809.1| membrane translocase, subunit Tim44 [Ehrlichia canis str. Jake]
Length = 212
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 18/225 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++A + F+F +L LGK +G + I++ ++
Sbjct: 1 MVELAIYALLAAFIFFRLYNSLGKTSG--------------LQPNNHSQAISIVVEDTQE 46
Query: 70 NLDSINELFPIGTRLNK----VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
D+ E+ + NK ++ I +F K F++ + ++E I+ +F EG VH
Sbjct: 47 YDDAEIEIESVMDTCNKDEKSIINQIKKKDKEFSLKHFMDGSIKAFEIIIKAFNEGNVHI 106
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ L+D+ +Y F++ + RK + +V + KII + N YIT++ + + I
Sbjct: 107 LSMLLDTNLYNSFSEEIENRKKLNHVYEDIIVSVTSHKIIKLDLSGNIAYITVKFITEQI 166
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ DKD+ +I K+ D+WTF ++I SN W L + +
Sbjct: 167 NFVKDKDDNVIQGSTSKINKIEDVWTFRKDITLSNKKWYLNAIQS 211
>gi|56416441|ref|YP_153515.1| hypothetical protein AM113 [Anaplasma marginale str. St. Maries]
gi|56387673|gb|AAV86260.1| hypothetical protein AM113 [Anaplasma marginale str. St. Maries]
Length = 217
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 4/221 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L G LGK + S + + + G I +
Sbjct: 1 MVELAIYAFVAAFIFFRLYGSLGKASSVNFQPSAIYPEQAGGEQAASDGSIN----SQDI 56
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ S+ +++ V I F K F+ + ++EAIV + +G + L
Sbjct: 57 PVSSVVADCASVEQISSVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGNAEFLSSL 116
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V + I+
Sbjct: 117 LSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVTEQINVVR 176
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D ++ + D W F R+I S W L ST
Sbjct: 177 DAGGQVVDGSTSKVNTIEDTWKFERDITTSGRRWYLTSTSA 217
>gi|255003915|ref|ZP_05278716.1| hypothetical protein AmarV_00428 [Anaplasma marginale str.
Virginia]
Length = 217
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 4/221 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L G LGK + S + + + G I +
Sbjct: 1 MVELAIYAFVAAFIFFRLYGSLGKASSVNFQPSAIYPEQAGGEQAASDGSIN----SQDI 56
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ S+ +++ V I F K F+ + ++EAIV + +G + L
Sbjct: 57 PVSSVVADCASVEQISSVFEAIKERNKGFSVKHFIEGSAAAFEAIVKALSQGNAEFLSSL 116
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ ++ F + RKS + +V I K+ +A ++ N+ IT++ V + I+
Sbjct: 117 LSKDMHDSFVREIERRKSAGHTHEDVVVSIVSQKVTSAELKGNSAAITVQFVTEQINVVR 176
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D ++ + D W F R+I S W L ST
Sbjct: 177 DAGGQVVDGSTSKVNTIEDTWKFARDITTSGRRWYLTSTSA 217
>gi|42520013|ref|NP_965928.1| hypothetical protein WD0107 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42409750|gb|AAS13862.1| conserved domain protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 216
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
++++A + F+F +L LG+ N K + S+ E + +
Sbjct: 1 MIELVIYALLAAFIFSRLYNSLGRSANLNLKKLTNVLD----VSRSREDVVENIEGYIDS 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ +SI + + I+ DF F+ + ++E I+ F +G + ++
Sbjct: 57 NDENSIKVTY----------KQILKKNKDFSISHFIEGSSIAFELIIKCFNQGNLSQLKP 106
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+D +Y +F + + RK + +S +V I KI+ + +N V+I + + + I+
Sbjct: 107 LLDKDLYDNFAEKIKHRK---EVHESIIVSIVSQKILEIKLVKNAVFIAVYFLSEQINFV 163
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + +IS KV D+W F +N+ S+P+W+L+S
Sbjct: 164 KNNEGDIISGSTSTINKVEDVWQFKKNVNSSDPSWLLVSIH 204
>gi|58696732|ref|ZP_00372276.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698125|ref|ZP_00373048.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225629991|ref|YP_002726782.1| hypothetical protein WRi_001450 [Wolbachia sp. wRi]
gi|58535371|gb|EAL59447.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58537084|gb|EAL60206.1| Tim44-like domain family [Wolbachia endosymbiont of Drosophila
simulans]
gi|225591972|gb|ACN94991.1| hypothetical protein WRi_001450 [Wolbachia sp. wRi]
Length = 216
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
++++A + F+F +L LG+ N K + S+ E + +
Sbjct: 1 MIELVIYALLAAFIFSRLYNSLGRSANLNLKKLTSVLD----VSRSREDVVENIEGYIDS 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ +SI + I+ DF F+ + ++E I+ F +G + ++
Sbjct: 57 NDENSIKVTYE----------QILKKNKDFSISHFIEGSSIAFELIIKYFNQGNLSQLKP 106
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+D +Y +F + + RK + +S +V I KI+ + +N V+I + + + I+
Sbjct: 107 LLDKDLYDNFAEKIKHRK---EVHESIIVSIVSQKILEIKLVKNVVFIAVYFLSEQINFV 163
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + +IS KV D+W F +N+ S+P+W+L+S
Sbjct: 164 KNNEGDIISGSTSTINKVEDVWQFKKNVNSSDPSWLLVSIH 204
>gi|197103473|ref|YP_002128850.1| hypothetical protein PHZ_c0007 [Phenylobacterium zucineum HLK1]
gi|196476893|gb|ACG76421.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 205
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 88/223 (39%), Gaps = 23/223 (10%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
+++FA + V QL VLG++ G ++ E
Sbjct: 4 LELIIFAGLAAIVLYQLYSVLGRRVG----------------RQPEDQAAAEPAQGSVRA 47
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+D + E G L + + ++ FD FL A+ +YE IV +F +G ++ L+
Sbjct: 48 VDRMAEPADDGVAL-TGLAAVKALDPSFDVGHFLGGAKQAYEMIVRAFADGDRATLKNLL 106
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE-NTVYITIRIVGQFISASY 189
+V F ++ R++ + + A + + +T+R + +F S +
Sbjct: 107 APQVLASFEAAIDQREAEGRTESVEFFHPPRADLEKADVTGADLGRVTVRFLAEFRSRTK 166
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + + ++WTF RN+ +PNW+L+ E
Sbjct: 167 GPEGEAVDD-----RRTAELWTFERNLKSRDPNWMLVHVDAAE 204
>gi|269959143|ref|YP_003328932.1| Tim44-like domain containing protein [Anaplasma centrale str.
Israel]
gi|269848974|gb|ACZ49618.1| Tim44-like domain containing protein [Anaplasma centrale str.
Israel]
Length = 217
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L G LGK + S + G+ + G + +
Sbjct: 1 MVELAIYAFVAAFIFFRLYGSLGKASSVNFQPSAIYPGQVSGEQAASDGSV----KPQDI 56
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+DS+ +++ V I + DF K F+ + ++EAIV + +G + L
Sbjct: 57 PVDSVVADSAPVDQISSVFEAIKARNKDFSVKHFIEGSAAAFEAIVSALNQGNTELLSSL 116
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
++ +Y F + R+ + + +V I K+ NA +E N IT++ V + I+
Sbjct: 117 LNRHMYNSFVKEVERRRDAGRVHEDVVVSITSQKVTNAELEGNFATITVQFVTEQINVVR 176
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + ++ + D W F R++ + W L ST
Sbjct: 177 DVEGQVVDGSTSKVNVIEDTWKFERDVTAAGRRWYLASTSA 217
>gi|4098584|gb|AAD00329.1| unknown [Rhodobacter capsulatus]
Length = 183
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 6/182 (3%)
Query: 49 YVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR 108
R + G D +D + P G+ + + V F+ FL ++
Sbjct: 4 EAPGPRAADRFEVIEGGPDHDIIDHV----PEGSDAAVALAQMKRVEPTFNVGAFLQGSK 59
Query: 109 NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINAS 168
+YE I+ +F G + A+ + + V + F +++ R+ V++S +G+ ++ + AS
Sbjct: 60 VAYEMILMAFERGDLSAVRRFLAPEVLEAFETAVADRQRQGLTVEASFLGLRELVLTEAS 119
Query: 169 IEE--NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
E +T+R G+ IS + D + ++ DP+ K D WTF R + S+PNW L+
Sbjct: 120 FNESSREAEVTVRFGGELISVARDANGQIVEGDPKAPRKQRDSWTFARVMGSSDPNWQLV 179
Query: 227 ST 228
+T
Sbjct: 180 AT 181
>gi|225677153|ref|ZP_03788152.1| hypothetical protein WUni_006480 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590820|gb|EEH12048.1| hypothetical protein WUni_006480 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 216
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
++++A + F+F +L LG+ N K + S+ E + +
Sbjct: 1 MIELVIYALLAAFIFSRLYNSLGRSANLNLKKLTNVLD----VSRSREDVVENIEGYIDS 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ +SI + + I+ DF F+ + ++E I+ F +G + ++
Sbjct: 57 NDENSIKVTY----------KQILKKNKDFSISHFIEGSSIAFELIIKCFNQGNLSQLKP 106
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+D +Y +F + + RK + +S +V I KI+ + +N V+I + + + I+
Sbjct: 107 LLDKDLYDNFAEKIKHRK---EVHESIIVSIVSQKILEIKLVKNAVFIAVYFLSEQINFV 163
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ +IS KV D+W F +N+ S+P+W+L+S
Sbjct: 164 KNNKGDIISGSTSTINKVEDVWQFKKNVNSSDPSWLLVSIH 204
>gi|68171233|ref|ZP_00544637.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Ehrlichia chaffeensis str. Sapulpa]
gi|88658281|ref|YP_507053.1| tim44-like domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|67999353|gb|EAM85998.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Ehrlichia chaffeensis str. Sapulpa]
gi|88599738|gb|ABD45207.1| tim44-like domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 212
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 14/223 (6%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L LGK +G + + + I + ++ D
Sbjct: 1 MVELAIYAFLAAFIFFRLYHSLGKTSGLQ------------SNSHSQTISIIMEDTQEHD 48
Query: 70 NLD-SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
D I+ + I +K ++ I +F + F++ + ++E I+ +F EG +H +
Sbjct: 49 TADIDIDSVMEICNENDKSIINHIKKKDKEFSLRHFMDGSIKAFEIIIKAFNEGNIHILS 108
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+D+ +Y F + + RK+ + + +V I KI S+ N YIT++ + + I+
Sbjct: 109 MLLDTNLYNSFVEEIENRKALGQLYEDIIVSITSHKITKLSLSGNIAYITVKFISEQINF 168
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
DKD+ ++ K+ D WTF ++ SN W L + +
Sbjct: 169 VKDKDDNILQGSTSKINKIEDTWTFRKDTTLSNKKWYLSTIQS 211
>gi|329114333|ref|ZP_08243095.1| Import Inner Membrane Translocase Subunit [Acetobacter pomorum
DM001]
gi|326696409|gb|EGE48088.1| Import Inner Membrane Translocase Subunit [Acetobacter pomorum
DM001]
Length = 242
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
++L A + F+ L+LR VLGK+ G +P + + R + GK ++ +
Sbjct: 26 VDLVLLALVAAFLVLRLRSVLGKRVGI-QPVQVQLQVRPDAAPR-----VVEGKPEQAEA 79
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ P GTR+ ++ DI F P+ FLN A+ ++ +V ++ +G ++ ++ +
Sbjct: 80 AAEFDIPAP-GTRVGTLLADIRQKDPSFTPQQFLNGAQTAFAQVVGAYAQGNLNVLKTYL 138
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE----ENTVYITIRIVGQFIS 186
V+ F ++ R + E+ ++ + I + I + + I +RIV IS
Sbjct: 139 TPAVFSAFEAGITARTNAEETQRTDVKAIRSLAIEDVRLTPMEAGTAAAIDVRIVSDQIS 198
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+K+ ++ + + D+WTF R + + W L + +
Sbjct: 199 LVLNKEGQPVTG-TDAVTEFSDLWTFERLLDVNGSTWRLAAARSA 242
>gi|58617502|ref|YP_196701.1| hypothetical protein ERGA_CDS_07750 [Ehrlichia ruminantium str.
Gardel]
gi|58417114|emb|CAI28227.1| Hypothetical protein ERGA_CDS_07750 [Ehrlichia ruminantium str.
Gardel]
Length = 213
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 11/222 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L LG+ +G + + + + D
Sbjct: 1 MVELAIYAFVAAFIFFRLYNSLGRTSGLQ--PNNHSQPVSILIQEDNNH--------DYT 50
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++D + + +M I +F K F++ + +++ I+ +F EG + + L
Sbjct: 51 DIDIESVMESCDDNDQSIMNTIKRKDREFSLKYFMDGSMKAFDIIIKAFNEGNIQILCSL 110
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+D +Y F + RK+ + + +V I KI + N +IT++ + + I+
Sbjct: 111 LDKDLYNSFLTEIEYRKNLGQVYEDVIVSIIYHKITKLKLSGNIAHITVKFISEQINFVK 170
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIP-PSNPNWVLISTKL 230
D++ ++ K+ D+WTF +++ ++ W L S +
Sbjct: 171 DQEGNILQGSTSKINKIEDVWTFKKDMSLLTSKKWYLSSIQP 212
>gi|88607695|ref|YP_504724.1| Tim44-like domain-containing protein [Anaplasma phagocytophilum HZ]
gi|88598758|gb|ABD44228.1| Tim44-like domain protein [Anaplasma phagocytophilum HZ]
Length = 241
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 89/221 (40%), Gaps = 7/221 (3%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G + ++AF+ F+F +L LG+ + S F G ++ I L +
Sbjct: 26 GMVELAIYAFVAAFIFFRLYSSLGRAS------SINFQGACATPEKPGDDRIALDAKNDQ 79
Query: 69 DNLDSINELFPIG-TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
++ + ++ + + + DF ++F+ + ++E I+ + G +
Sbjct: 80 QDIPLTSVTEEEHFEEVSPGIEVMRARSMDFSLRNFMAGSAAAFEVIMKALNRGDTELLS 139
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
L+ +Y+ F + R S + +V I KI A + + IT++ + + I+
Sbjct: 140 SLLSDDIYKSFEKEIMRRNSEGHIHEDVVVSIVSQKITAAKVIGDVAAITVKFLTEQINV 199
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +I+ V D WTF +N + W L +T
Sbjct: 200 VRNAAGDVIAGSTSKINVVEDFWTFEKNANSPSRKWYLSAT 240
>gi|254455846|ref|ZP_05069275.1| import inner membrane translocase, subunit Tim44 [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082848|gb|EDZ60274.1| import inner membrane translocase, subunit Tim44 [Candidatus
Pelagibacter sp. HTCC7211]
Length = 198
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
I+L A I F+FL+LRG+LGK+TG E GK
Sbjct: 8 IDIILLAMIAGFIFLRLRGILGKRTGFE--------------------------GKAAPQ 41
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFD---PKDFLNEARNSYEAIVDSFFEGK--VHA 125
D I + V + FD K+F+ A+ +YE I+ F + +
Sbjct: 42 FDKILKEA--------VAKQAPVNNETFDENAQKEFIKGAKIAYETIITDFSDNDNKLTT 93
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ L++ +Y FND+L R + + +GI+ I + + +T+ + + I
Sbjct: 94 SKPLLNKEIYDQFNDALKERSERGHYAEITFIGINSATIKEHKKIDKILNVTVDFIAEVI 153
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ DKD +IS DPE K+ D W F R++ NPNW L++T
Sbjct: 154 TCIKDKDKKIISGDPEKIKKIYDTWVFSRDVTSPNPNWQLVNT 196
>gi|304320483|ref|YP_003854126.1| hypothetical protein PB2503_04547 [Parvularcula bermudensis
HTCC2503]
gi|303299385|gb|ADM08984.1| hypothetical protein PB2503_04547 [Parvularcula bermudensis
HTCC2503]
Length = 222
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 7/222 (3%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
D +++ F I F+ +L +LG K G+E P + + R ER G+G ++
Sbjct: 2 NDPVLIFFVVIAAFLSYRLYTLLGSKGGHE-PTDAERERIGLPTGRPERD----GQGTQE 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
D +++ L + + Y DFDP +F+ A+ +YE I+++F G++ +
Sbjct: 57 D--EAVVAPRSDAKPLPAWAETVRADYADFDPDEFVTGAKAAYEMIIEAFANGRLDDVRA 114
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
VD V + F ++ R + ++ ++ +LVGI+ +++ A + + +T++ I +
Sbjct: 115 YVDPDVMRTFEIAVRGRDNAQQTMEVTLVGIERAEVVEAKRQSAHLDVTVKFRSDQIRVT 174
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + +I DP VID WTF R + ++PNW L +T+
Sbjct: 175 RNAEGDVIEGDPNRIDLVIDRWTFSRPLSSTDPNWTLTATEA 216
>gi|58584799|ref|YP_198372.1| hypothetical protein Wbm0542 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419115|gb|AAW71130.1| Uncharacterized conserved protein related to eukaryotic translocase
of inner mitochondrial membrane [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 218
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
++++A + FVF +L LG+ T N K + S+ E + +
Sbjct: 1 MIELVIYALLAAFVFSRLYNSLGRSTSLNLKKLTSVLD----ISQVREDVVENIEDYIDS 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ D I + I+ DF F+ + +E I+ F +G + ++
Sbjct: 57 NDKDPIKATYE----------QILQKNKDFSISHFMEGSGVVFELIIKYFNQGNLSQLKP 106
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+D +Y +F + RK + +S +V I KI+ + +N V+I + + + I+
Sbjct: 107 LLDKDLYNNFAGKIKQRK---EIYESIIVSIVSQKILEIKLVKNVVFIAVYFLSEQINFV 163
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ +IS KV D+W F +N+ SNP+W+L S
Sbjct: 164 KNDKGDVISGSTSTINKVEDVWQFKKNVTSSNPSWLLTSI 203
>gi|57239470|ref|YP_180606.1| hypothetical protein Erum7440 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579448|ref|YP_197660.1| hypothetical protein ERWE_CDS_07840 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161549|emb|CAH58476.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418074|emb|CAI27278.1| Hypothetical protein ERWE_CDS_07840 [Ehrlichia ruminantium str.
Welgevonden]
Length = 213
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 95/222 (42%), Gaps = 11/222 (4%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ ++AF+ F+F +L LG+ +G + + + + D
Sbjct: 1 MVELAIYAFVAAFIFFRLYNSLGRTSGLQ--PNNHSQPVSILIQEDNNH--------DYT 50
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++D + + +M I +F K F++ + +++ I+ +F EG + L
Sbjct: 51 DIDIESVMESCDDNDKSIMSTIKRKDREFSLKYFMDGSMKAFDIIIKAFNEGNTQILCSL 110
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+D +Y F + RK+ + + +V I KI + N +IT++ + + I+
Sbjct: 111 LDKDLYNSFLTEIEYRKNLGQVYEDVIVSIIHHKITKLKLSGNIAHITVKFISEQINFVK 170
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIP-PSNPNWVLISTKL 230
D++ ++ K+ D+WTF +++ ++ W L S +
Sbjct: 171 DQEGNILQGSTSKINKIEDVWTFKKDMSLLTSKKWYLSSIQP 212
>gi|258541896|ref|YP_003187329.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01]
gi|256632974|dbj|BAH98949.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01]
gi|256636031|dbj|BAI02000.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-03]
gi|256639086|dbj|BAI05048.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-07]
gi|256642140|dbj|BAI08095.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-22]
gi|256645195|dbj|BAI11143.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-26]
gi|256648250|dbj|BAI14191.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-32]
gi|256651303|dbj|BAI17237.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654294|dbj|BAI20221.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-12]
Length = 242
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 12/225 (5%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
++L A + F+ L+LR VLGK+ G +P + + R + GK ++ +
Sbjct: 26 VDLVLLALVAAFLVLRLRSVLGKRVGI-QPVQVKLQVRPDAAPR-----VVEGKPEQAET 79
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ P GTR+ ++ DI F P+ FLN A+ ++ +V ++ +G V ++ +
Sbjct: 80 AAEFDIPAP-GTRVGTLLADIRQKDPSFTPQQFLNGAQIAFAQVVGAYAQGNVDVLKTYL 138
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE----ENTVYITIRIVGQFIS 186
V F ++ R + E+ ++ + I + I + I I +RIV IS
Sbjct: 139 TPAVLAAFEAGITARANAEETQRTDVKAIRSLAIEDVRISPMEAGTAAAIDVRIVSDQIS 198
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+K+ ++ + + D+WTF R + + W L + +
Sbjct: 199 LVLNKEGQPVTG-TDAVTEFSDLWTFERLLDVNGSTWRLAAARSA 242
>gi|114799709|ref|YP_758741.1| Tim44 domain-containing protein [Hyphomonas neptunium ATCC 15444]
gi|114739883|gb|ABI78008.1| Tim44 domain protein [Hyphomonas neptunium ATCC 15444]
Length = 204
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 23/226 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + +L+ A + FV +L LG + G+E P KR G + +
Sbjct: 1 MSNPLIEVLILAAVALFVLWRLYSALG-RGGDEGPVQRP---APTPEKRPTPGEMPAPQP 56
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
++ +N I G + DI + F ++F+ A+ +Y+ IV ++ G +A
Sbjct: 57 RRIENERPIFTGPAAG-----ALEDIYNADRSFSTEEFMRGAKAAYQLIVGAYARGDRNA 111
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ L+D VY+ ++ +++ R + L+ I +I A ++ + + +R +
Sbjct: 112 LRPLLDDDVYEAWDAAIAERDATGARA-FELLRIKKAEIDRAELDGSMARVMVRYEAEL- 169
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
D E V +IWTF+R++ S+PNW+L ++
Sbjct: 170 ------------GDGETTRIVREIWTFMRDVSSSDPNWLLDDVEVA 203
>gi|71083043|ref|YP_265762.1| translocase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062156|gb|AAZ21159.1| Putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter ubique HTCC1062]
Length = 197
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
I+L A I F+FL+LRG+LGKKTG E F ++ + +N
Sbjct: 8 IDIILLAMIAGFIFLRLRGILGKKTGFEGKIPPQFEKEFQK--------TNITPKPVSEN 59
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK--VHAIEK 128
D + K+FL A+ +YE I+ F + + A +
Sbjct: 60 FDEV------------------------SQKEFLKGAKIAYETIITDFSDSDNKLIASKP 95
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ ++Y F ++L R + + + +GI I E+++ +T+ V + I+
Sbjct: 96 LLSKKIYDQFKEALEDRANKGHFAEITFIGIKSAVIKTHKKIEDSLEVTVDFVSEIITCI 155
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
DKD ++S D + V D W F ++I SNPNW+LI+T
Sbjct: 156 KDKDKNIVSGDSDKIKTVYDTWVFSKDIKSSNPNWLLINT 195
>gi|91762532|ref|ZP_01264497.1| Putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter ubique HTCC1002]
gi|91718334|gb|EAS84984.1| Putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter ubique HTCC1002]
Length = 197
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
I+L A I F+FL+LRG+LGKKTG E F ++ + +N
Sbjct: 8 IDIILLAMIAGFIFLRLRGILGKKTGFEGKIPPQFEKEFQK--------TNITPKPVSEN 59
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK--VHAIEK 128
D + K+FL A+ +YE I+ F + + A +
Sbjct: 60 FDEV------------------------SQKEFLKGAKIAYETIITDFSDSDNKLIASKP 95
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L++ ++Y F ++L R + + + +GI I E+++ +T+ V + I+
Sbjct: 96 LLNKKIYDQFKEALEDRANKGHFAEITFIGIKSAVIKTHKKIEDSLEVTVDFVSEIITCI 155
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
DKD ++S D + V D W F ++I SNPNW+LI+T
Sbjct: 156 KDKDKNIVSGDSDKIKTVYDTWVFSKDIKSSNPNWLLINT 195
>gi|190571472|ref|YP_001975830.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018875|ref|ZP_03334683.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357744|emb|CAQ55195.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995826|gb|EEB56466.1| Tim44-like domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 219
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
++++A + F+F +L LG+ N K +G S+ E + +
Sbjct: 1 MIELVIYALLAAFIFSRLYNSLGRSASLNLKKLTGVLD----VSQSKEDVVENIEDYIYS 56
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ SI + I+ +F +F+ + ++E I+ F +G + ++
Sbjct: 57 NDKSSIETTYE----------QILQKNKEFSISNFIEGSSIAFELIIKYFNQGNLPQLKS 106
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+D +Y F D + RK + +S +V I KI+ + +N ++I + + + I+
Sbjct: 107 LLDKDLYNSFVDKIKHRK---ETHESIIVSIVSQKILEIKLVKNVIFIAVYFLSEQINFV 163
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + + S KV D+W F +NI S+ W+L+S
Sbjct: 164 KNNEGNITSGSMSTINKVEDVWQFKKNINSSDLTWLLVSI 203
>gi|254417984|ref|ZP_05031708.1| Tim44-like domain superfamily [Brevundimonas sp. BAL3]
gi|196184161|gb|EDX79137.1| Tim44-like domain superfamily [Brevundimonas sp. BAL3]
Length = 213
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 88/225 (39%), Gaps = 22/225 (9%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F I++FA I V QL VLGK+ G + + D + + + + +
Sbjct: 5 FQIVIFAVIAAIVLFQLYNVLGKRVGRQ-------------PQEDAKALPSSPTSTAEAS 51
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + + + + + FDP F+ AR +YE IV + G A+ L+
Sbjct: 52 KTPALDAATLAS-----IAGLKARDPAFDPNRFVEGARQAYETIVRGYAAGDRAALTPLL 106
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V F+ ++ R++ + + + A+++ + +R + + S
Sbjct: 107 TPNVMASFDAGIAARETRGETETVEFLFPPRADLEGATVQGDKAVAKVRFLAELRSRVTK 166
Query: 191 KDNLL---ISSDP-EIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++ +P + + WTF R + ++PNWVL +
Sbjct: 167 ASGDTADSVTGEPLVEERRTAEHWTFERTLGAADPNWVLARVEPA 211
>gi|302381470|ref|YP_003817293.1| import inner membrane translocase subunit Tim44 [Brevundimonas
subvibrioides ATCC 15264]
gi|302192098|gb|ADK99669.1| import inner membrane translocase subunit Tim44 [Brevundimonas
subvibrioides ATCC 15264]
Length = 214
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 21/225 (9%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
FLI++FA I FV QL VLGKK G +P + + + + + T G
Sbjct: 5 FLIVIFAVIAAFVLFQLYNVLGKKVGR-QPQDDAKAPPALPATGPDAPLRTPG------- 56
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ L + + FDP F++ AR +YE IV + G A++ L+
Sbjct: 57 ---------VDATLLAAAASLRARDPAFDPAKFIDGARQAYETIVRGYAAGDRAALKPLL 107
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V F ++ R++ + + + + AS E + +R + + S
Sbjct: 108 TPAVLDSFETGIAARETRGETEQVEFLHPPRADLELASAEGDRAVAKVRFLAELRSKIMP 167
Query: 191 KDNLLISSDPEIF----GKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ P + + WTF R++ S+PNWVL +
Sbjct: 168 PADEATPGAPAEPRIEERRTAEHWTFERSLGASDPNWVLARVEPA 212
>gi|262277816|ref|ZP_06055609.1| import inner membrane translocase subunit Tim44 [alpha
proteobacterium HIMB114]
gi|262224919|gb|EEY75378.1| import inner membrane translocase subunit Tim44 [alpha
proteobacterium HIMB114]
Length = 204
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
+ G I+L A + F+ L+LR LGK N P F+ + + I
Sbjct: 4 NFGYIDIILLAIMAGFILLRLRSTLGKGADN-MPMKARFTQAQSNEEFTKPIIE------ 56
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+I T FD K F+ A +YE I+++F +G A+
Sbjct: 57 ----------------------DEIKQDTTKFDEKIFIKGAEAAYEIIINAFAKGDRKAL 94
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ L+ +Y++F + R+S + + + S +GI + KI++ ++ + + V + ++
Sbjct: 95 KPLLTKDLYKNFEGVIKERESKKISSQMSFIGIKETKILDIDNKDTFYKVKTKFVSEIVN 154
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+I +PE V D+W F +++ ++P W L E
Sbjct: 155 CLKSDKGEVIEGNPEEIKLVTDVWVFEKDLKNNDPTWYLTELSSEE 200
>gi|296115110|ref|ZP_06833751.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
hansenii ATCC 23769]
gi|295978211|gb|EFG84948.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
hansenii ATCC 23769]
Length = 227
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 100/225 (44%), Gaps = 15/225 (6%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++ + F+ L+LRG+LGK+ G E P + + + +
Sbjct: 12 LVFLGLVAVFLVLRLRGILGKRVGAE-PAARTMQPTPTPAP-------VIEGKPEPVAPA 63
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ ++ TR+ +V+ I + F P F+ + +++ IV ++ G + + + +
Sbjct: 64 TTYDIPTPDTRVGQVLSAIAARQQGFTPDGFIRQVEDAFRQIVQAYAVGDIETLRQHLTE 123
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT----VYITIRIVGQFISAS 188
+ F ++ +R+ + ++S + I DM II+A + + I +RIV +S +
Sbjct: 124 STFTAFEAAIVSRQQAHETMRSEIRDITDMAIIDAELSPDVSVPYARIEVRIVSDQVSVT 183
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLG 231
D++ +S + + D+WTF R + + P W L +++
Sbjct: 184 LDQNGQPVSG-VDAVTEFSDLWTFERILGAATPGAQWRLGASRSA 227
>gi|329891166|ref|ZP_08269509.1| tim44-like domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846467|gb|EGF96031.1| tim44-like domain protein [Brevundimonas diminuta ATCC 11568]
Length = 205
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 20/222 (9%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F I++FA I + QL VLGKK G ++ E +
Sbjct: 2 TFQIVIFAVIAAVLLFQLYNVLGKKVG----------------RQPEDNPKPVPVPAAPA 45
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ L + + + +FDP FL AR +YE IV ++ +G A+ L
Sbjct: 46 GAPEAARGPVVDPALTAAIAGLKTRDPNFDPHRFLEGARQAYETIVRAYAKGDRDALRPL 105
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ +V F ++ R++ LV + A+ E + +R + + +
Sbjct: 106 LTDKVMGSFEAGIAAREARGDAESVELVHAPRADLELATTEGDRALAKVRFLAEVRGSLT 165
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++ + + +IWTF R + S+PNW L +
Sbjct: 166 PSGGETVTEE----RRTAEIWTFERRLGASDPNWALARVEPA 203
>gi|167648993|ref|YP_001686656.1| import inner membrane translocase subunit Tim44 [Caulobacter sp.
K31]
gi|167351423|gb|ABZ74158.1| import inner membrane translocase subunit Tim44 [Caulobacter sp.
K31]
Length = 199
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ++ A + + QL LG++ G +P + + RD + + G+
Sbjct: 1 MFEWIILAALAAVILYQLYATLGRRVGR-QPEDAPAAVPASVAPRDVKTLEVPGEAL--- 56
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + + DFD FL+ AR +YE IV +F G ++ L
Sbjct: 57 ----------------SGLAALRARQADFDIGHFLSGARQAYEMIVKAFAAGDRETLKPL 100
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + V +F +++ R++ + K+ + + + +E + +RI+ + + S
Sbjct: 101 LAADVMANFEAAIADREAAGRTEKAEFLATPRTDLDSIKVEGDVARAVVRILAEVRTRST 160
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + D+WTF R++ NPNW L+ + E
Sbjct: 161 SAAGDAVDD-----RRTADLWTFERDLKSRNPNWTLVRVDVAE 198
>gi|162147851|ref|YP_001602312.1| transporter protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161786428|emb|CAP56010.1| putative transporter protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 228
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F ++LF + F+ L+LR +LG + G E S G + G+ +
Sbjct: 12 FDLVLFGLVAAFLALRLRSILGTRVGVE--------PAPPPSAVPRPGPVIEGRAEPPAT 63
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
L + P TR+ +V+ I DF P FL ++ IV +F G V + + +
Sbjct: 64 LTDYDVPAPE-TRVGQVLAAIAQQERDFVPAQFLKGVEAAFRQIVLAFAAGDVAMLRERL 122
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT----VYITIRIVGQFIS 186
+ + F ++ +R+ + + K+ + I + I++A+IEE I +RIV IS
Sbjct: 123 TANAFSAFEAAIRSREQSGEIQKAEVRAIASLAIVDAAIEERDGATHARIDVRIVSDQIS 182
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP--SNPNWVLISTKLG 231
+ DKD ++ + + D+WTF R + S W L +++
Sbjct: 183 LTSDKDGHPVAG-TDAVTEFSDLWTFERPLGVAISGAAWRLAASRSA 228
>gi|209542471|ref|YP_002274700.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530148|gb|ACI50085.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 226
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F ++LF + F+ L+LR +LG + G E S G + G+ +
Sbjct: 10 FDLVLFGLVAAFLALRLRSILGTRVGVE--------PAPPPSAVPRPGPVIEGRAEPPAT 61
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
L + P TR+ +V+ I DF P FL ++ IV +F G V + + +
Sbjct: 62 LTDYDVPAPE-TRVGQVLAAIAQQERDFVPAQFLKGVEAAFRQIVLAFAAGDVAMLRERL 120
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT----VYITIRIVGQFIS 186
+ + F ++ +R+ + + K+ + I + I++A+IEE I +RIV IS
Sbjct: 121 TANAFSAFEAAIRSREQSGEIQKAEVRAIASLAIVDAAIEERDGATHARIDVRIVSDQIS 180
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP--SNPNWVLISTKLG 231
+ DKD ++ + + D+WTF R + S W L +++
Sbjct: 181 LTSDKDGHPVAG-TDAVTEFSDLWTFERPLGVAISGAAWRLAASRSA 226
>gi|330993443|ref|ZP_08317378.1| putative transporter protein [Gluconacetobacter sp. SXCC-1]
gi|329759473|gb|EGG75982.1| putative transporter protein [Gluconacetobacter sp. SXCC-1]
Length = 258
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 20/237 (8%)
Query: 6 MD--SGDF--LILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIIT 61
M+ SG F +++ + F+ L+LR +LG++ G E P + + E+ +
Sbjct: 31 MNFISGHFPLDLVVLGLVAVFLVLRLRSILGRRVGAE-PAVRPMAAQPAAQPMVEKPVEP 89
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
E+ TR+ V+ I ++ F P++F ++ IV ++ G
Sbjct: 90 PPPAITY-------EIPTPDTRVGGVLARIAALQPGFTPQEFARGTETAFRQIVGAYAAG 142
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT-----VYI 176
+ + + + + + F ++ +R+ + ++S + I D+ II A ++E I
Sbjct: 143 DLDVLRERLTAATFGAFEAAIQSRQQAGEVLRSEIRDITDIAIIGAEVDEAAGPSPLARI 202
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLG 231
+RIV IS + D ++ + + D+WTF R + + P W L +++
Sbjct: 203 EVRIVSDQISLTVDSSGHPVAG-VDAVTEFSDLWTFERLLGVNAPGAGWRLGASRSA 258
>gi|295691579|ref|YP_003595272.1| import inner membrane translocase subunit Tim44 [Caulobacter segnis
ATCC 21756]
gi|295433482|gb|ADG12654.1| import inner membrane translocase subunit Tim44 [Caulobacter segnis
ATCC 21756]
Length = 198
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 89/223 (39%), Gaps = 26/223 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
IL A + V QL LG++ G + + +G + L
Sbjct: 1 MLQILFLAAVAAIVLYQLYATLGRRVGRQPEDTPVKAGAGGPAPVTTDPHPVLR------ 54
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
++ + + + DFDP F+ AR +YE IV ++ +G ++ L
Sbjct: 55 ---------------SEGLAALKARQPDFDPAKFMTGARAAYEQIVTAYADGDRETLKPL 99
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ V +F +++ R++ ++ K + + + + + +T +RI+ + + +
Sbjct: 100 LAPEVMANFEQAMAAREAAGRSEKVEFLTSPRLDLESVDLVGDTAKAVVRILAEVRTRTK 159
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ + + ++WTF R + +NPNW+L E
Sbjct: 160 DERGEGVDD-----RRTAELWTFEREVRNANPNWLLSFVAAAE 197
>gi|16127971|ref|NP_422535.1| hypothetical protein CC_3741 [Caulobacter crescentus CB15]
gi|221236793|ref|YP_002519230.1| transporter [Caulobacter crescentus NA1000]
gi|13425513|gb|AAK25703.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965966|gb|ACL97322.1| transporter [Caulobacter crescentus NA1000]
Length = 234
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 29/222 (13%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F IL A + V QL LG++ G ++ E +T G
Sbjct: 41 FQILFLAAVAALVLYQLYSTLGRRVG----------------RQPEDAAVTAMPGAAPAP 84
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+D + + + + + + DFDP FL R +YE IV ++ EG + L+
Sbjct: 85 VDPVLQ--------AEGVATLRARQPDFDPARFLMGVRAAYEQIVKAYAEGDRETLTPLL 136
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V +F ++ R++ + K + + + + +T +RI+ + + + D
Sbjct: 137 APDVMDNFERAMVARETAGRTEKVEFLTPPRVDLERVDVVGDTAKAVVRILAEVRTRTKD 196
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + + ++WTF R + ++PNW L E
Sbjct: 197 ERGEGVDD-----RRTAELWTFEREVKSTDPNWHLTFVAAAE 233
>gi|261314892|ref|ZP_05954089.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
gi|261303918|gb|EEY07415.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
Length = 168
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 17 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 76
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 77 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 136
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165
VY+ F ++ R+ + V+SS VGID I
Sbjct: 137 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIA 168
>gi|254707406|ref|ZP_05169234.1| calcium-binding EF-hand [Brucella pinnipedialis M163/99/10]
Length = 164
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFF----SGKYVFSKRDERGIITLGKGKKKDNLDS 73
+FLQLR VLG++TGNEKP + S + + +++L + + + +
Sbjct: 13 IAAVIIFLQLRNVLGRRTGNEKPPFDPYASARSSDAAPAGGEPDNVVSLPRRANEKDYTA 72
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
I+++ P G+ +N+ +R I +V F+P F++ + +YE IV SF +G ++ L+
Sbjct: 73 IDKIAPAGSPVNEGLRAIYAVDPTFEPARFVDGVKIAYEMIVMSFADGDREVLKNLLSKD 132
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165
VY+ F ++ R+ + V+SS VGID I
Sbjct: 133 VYEGFVAAIDEREKRGETVRSSFVGIDKAGIA 164
>gi|330813377|ref|YP_004357616.1| putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486472|gb|AEA80877.1| putative translocase transmembrane protein with Tim44 Pfam domain
[Candidatus Pelagibacter sp. IMCC9063]
Length = 193
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 31/210 (14%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINEL 77
I F+FL+LR VLGK D I K +D+ + E+
Sbjct: 1 MIAGFIFLRLRNVLGK-------------------GADNSPIKPNFANKSRDDFSFVKEV 41
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
S FD F A +YE I+++F +G +++ L+ ++Y D
Sbjct: 42 ------------RTESNKPVFDEASFKKGAEYAYEMIINAFAKGDKQSLKPLLTKKLYLD 89
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
F + R + + +GI+ M I S +T R + Q I+ ++ ++
Sbjct: 90 FEKIIDDRNEKKLTSSLTFIGIEKMSIDKVSNVNTKYKVTARFISQIINCLKNEKGEVVE 149
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
D E D+W+F R++ S+P W L
Sbjct: 150 GDAEKTKTTTDVWSFERDLKDSDPTWYLTE 179
>gi|254295483|ref|YP_003061506.1| import inner membrane translocase subunit Tim44 [Hirschia baltica
ATCC 49814]
gi|254044014|gb|ACT60809.1| import inner membrane translocase subunit Tim44 [Hirschia baltica
ATCC 49814]
Length = 200
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 26/223 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D +++FA + FFV +L VLG KTG E P S +G +
Sbjct: 2 DIELIIFAAVAFFVLYRLYSVLGTKTGAEPPPSVVREATQKRKNS---------EGSDES 52
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
N+ F M +I + + F P DF +++ +YE IV++F EG + L
Sbjct: 53 NVTPFRPSFT--GPGASAMEEISQIDSTFSPSDFTRKSKKAYEMIVEAFAEGDKETLSNL 110
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINAS-IEENTVYITIRIVGQFISAS 188
+ VY+ + ++ R+ N L+ + +I +A ++ + +++ Q
Sbjct: 111 LVDDVYEAYVSAIDEREQNN-TEPLRLMRLKSAEIADAELLDGDIGQVSVSFEAQL---- 165
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
SD E +IWTF R++ SNP W+L
Sbjct: 166 ---------SDGENLRTAKEIWTFERSLKSSNPAWLLGGVSEA 199
>gi|296535049|ref|ZP_06897314.1| Tim44 domain protein [Roseomonas cervicalis ATCC 49957]
gi|296264626|gb|EFH10986.1| Tim44 domain protein [Roseomonas cervicalis ATCC 49957]
Length = 165
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Query: 77 LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136
+ T + + ++ I FDP FL A ++ IV +F G + L+ Y
Sbjct: 12 VPDPRTPVGQALQRIRQADAGFDPYAFLGGAEGAFRMIVTAFAAGDRATLRDLLSEDTYA 71
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLI 196
F +++ R+S + ++ + G+ +M I A + + IT+RIV ++ + +
Sbjct: 72 GFEQAITARESAGERQRTEIHGVHEMAIDAADLRGSVADITLRIVSDQVNLTTGPQGEAV 131
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
S E ++ D+WTF R++ +P W L+ T+
Sbjct: 132 SG-TEAVTELTDVWTFQRDLRSGDPTWKLVGTQAA 165
>gi|241762227|ref|ZP_04760309.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|241373274|gb|EER62893.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 217
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 27 LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK 86
L VLG++TG+E+ F+ + ++ +KK +
Sbjct: 18 LYNVLGRRTGHEQSFTKPTEVSTTVVAQPNTALLMPASEQKKRE-------EIVQPEAWD 70
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R IVS FD F+ A+++Y I+++F++ + +V V++ F + R+
Sbjct: 71 GIRRIVSRDAHFDLTGFIEGAKSAYGKILEAFWQNDRSKLADMVSKDVFEAFQQVIEKRE 130
Query: 147 SNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ +++ LV ID + A IE + IT+ + + + ++I+
Sbjct: 131 AEGSRLENRLVNIDKALVQKAGIEGDNAIITVSYDAWISTMLRNHEGIMIAGSSTDALPT 190
Query: 207 IDIWTFVRNIPP-SNPNWVLISTKLG 231
D+WTF R+I NW+L+ T
Sbjct: 191 HDVWTFSRSIKQEPKTNWLLVETLAA 216
>gi|56552532|ref|YP_163371.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260753807|ref|YP_003226700.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|56544106|gb|AAV90260.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis ZM4]
gi|258553170|gb|ACV76116.1| import inner membrane translocase subunit Tim44 [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 217
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 27 LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK 86
L VLG++TG+E+ F+ + ++ +KK +
Sbjct: 18 LYNVLGRRTGHEQSFTKPAEVSTTVVAQPNTALLMPASEQKKRE-------EIVQPEAWD 70
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R IVS FD F+ A+++Y I+++F++ + +V V++ F + R+
Sbjct: 71 GIRRIVSRDAHFDLTGFIEGAKSAYGKILEAFWQNDRSKLADMVSKDVFEAFQQVIEKRE 130
Query: 147 SNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ +++ LV ID + A IE + IT+ + + + ++I+
Sbjct: 131 AEGSRLENRLVNIDKALVQKAGIEGDNAIITVSYDAWISTMLRNHEGIMIAGSSTDALPT 190
Query: 207 IDIWTFVRNIPP-SNPNWVLISTKLG 231
D+WTF R+I NW+L+ T
Sbjct: 191 HDVWTFSRSIKQEPKTNWLLVETLAA 216
>gi|11992022|gb|AAG42409.1|AF300471_12 unknown [Zymomonas mobilis subsp. mobilis ZM4]
Length = 201
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 27 LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK 86
L VLG++TG+E+ F+ + ++ +KK +
Sbjct: 2 LYNVLGRRTGHEQSFTKPAEVSTTVVAQPNTALLMPASEQKKRE-------EIVQPEAWD 54
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R IVS FD F+ A+++Y I+++F++ + +V V++ F + R+
Sbjct: 55 GIRRIVSRDAHFDLTGFIEGAKSAYGKILEAFWQNDRSKLADMVSKDVFEAFQQVIEKRE 114
Query: 147 SNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ +++ LV ID + A IE + IT+ + + + ++I+
Sbjct: 115 AEGSRLENRLVNIDKALVQKAGIEGDNAIITVSYDAWISTMLRNHEGIMIAGSSTDALPT 174
Query: 207 IDIWTFVRNIPP-SNPNWVLISTKLG 231
D+WTF R+I NW+L+ T
Sbjct: 175 HDVWTFSRSIKQEPKTNWLLVETLAA 200
>gi|58040316|ref|YP_192280.1| putative translocase transmembrane protein [Gluconobacter oxydans
621H]
gi|58002730|gb|AAW61624.1| Putative translocase transmembrane protein [Gluconobacter oxydans
621H]
Length = 265
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 25/243 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDERGIITLGKGK- 66
+++ + + ++L VLG++ G E+P +GF G + D
Sbjct: 24 LVVLFVLAVALGVRLYRVLGRRVGMQGVRQERPGAGFGPGAQKGAAPDAARPSIPPPLPG 83
Query: 67 -------------KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
+ D E+ TR+ V+ +I SV+ F P FL EA ++
Sbjct: 84 QVAGKPGAAPGVFDQAVPDVAYEIPAPATRVGTVLGEIGSVFPGFSPDGFLKEAEGTFRQ 143
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE-- 171
+V +F G A+EKL+ F+ ++ R + +S L GI+ + I++A +
Sbjct: 144 VVPAFAVGDRTALEKLLTPASMDSFSAAIDARVQAGETQRSDLRGIESLSILDAMLVSAE 203
Query: 172 ---NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
I ++IV + ++ D++ + E + D+W F R S+ W L ++
Sbjct: 204 DGTRVGRIEVKIVSRQVNILTDREGEPVVG-TEAVTEFHDLWLFERVAGQSDARWRLAAS 262
Query: 229 KLG 231
+
Sbjct: 263 RPA 265
>gi|114571519|ref|YP_758199.1| import inner membrane translocase Tim44 [Maricaulis maris MCS10]
gi|114341981|gb|ABI67261.1| import inner membrane translocase, subunit Tim44 [Maricaulis maris
MCS10]
Length = 206
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 17/216 (7%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
D L+ F +L VLG++ G+ + + + + +G
Sbjct: 2 DIWTLIGGVAAIFFAYRLYTVLGRREGHMEAPAPRTKPEAASDSDKAPSLRPAFEGPAAA 61
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
L++I V T FDP A+N+Y IV++F G +E L
Sbjct: 62 GLEAIAA-----------------VDTRFDPTAVKEGAQNAYVMIVEAFAAGDRKVLEPL 104
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ V + ++ R + V++ + + D+ II A +NT I +R V + + +
Sbjct: 105 LAPNVLDRYTTAIDQRADRGETVRTEVERLKDVDIIEAGHADNTARIKVRFVAEIATETR 164
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
D D+ +++ D V + W F R +PNWVL
Sbjct: 165 DSDDAVVAGDIGRLSTVTEDWVFERRTNKGDPNWVL 200
>gi|99034421|ref|ZP_01314428.1| hypothetical protein Wendoof_01000767 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 198
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 28 RGVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK 86
LG+ N K + S+ E + + ++ +SI +
Sbjct: 1 YNSLGRSANLNLKKLTNVLD----VSRSGEDVVENIEGYIDSNDENSIKVTY-------- 48
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ I+ DF F+ + ++E I+ F +G + ++ L+D +Y +F + + RK
Sbjct: 49 --KQILKKNKDFSISHFIEGSSIAFELIIKCFNQGNLSQLKPLLDKDLYDNFAEKIKHRK 106
Query: 147 SNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ +S +V I KI+ + +N V+I + + + I+ + + +IS KV
Sbjct: 107 ---EVHESIIVSIVSQKILEIKLVKNAVFIAVYFLSEQINFVKNNEGDIISGSTSTINKV 163
Query: 207 IDIWTFVRNIPPSNPNWVLISTK 229
D+W F +N+ S+P+W+L+S
Sbjct: 164 EDVWQFKKNVNSSDPSWLLVSIH 186
>gi|315497202|ref|YP_004086006.1| import inner membrane translocase subunit tim44 [Asticcacaulis
excentricus CB 48]
gi|315415214|gb|ADU11855.1| import inner membrane translocase subunit Tim44 [Asticcacaulis
excentricus CB 48]
Length = 207
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 20/220 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L+ A I V QL VLG++ G V D G + K
Sbjct: 5 LLILALIAVVVLFQLYNVLGRRVGF-----KAEDKPVVPKTEDSEGPFNRPGQEPKA--- 56
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
P R+ + + S F+ +F+ +AR +YE IV +F G++ ++ +
Sbjct: 57 -----QPERLRMPN-LDALKSRDAHFNEINFVEKAREAYEQIVLAFNRGEIEGLKDRLSE 110
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
VY F ++ R K + S V + ++++ + +R + + + D D
Sbjct: 111 SVYGVFAKAIEARGEQ-KAMTVSFVESPKTDLDQIDLKDDRASVRVRFLSELLYEMADPD 169
Query: 193 NLLISSDP-EIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+P + + + WTF +N+ W+L +
Sbjct: 170 G----GEPKKAHRRTAEFWTFQKNLKSPTNPWILSRVEAA 205
>gi|289609222|emb|CBI60483.1| unnamed protein product [Sordaria macrospora]
Length = 173
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 78/182 (42%), Gaps = 9/182 (4%)
Query: 18 FITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINEL 77
+ F+ ++L VLGK+TG+E P + +T +
Sbjct: 1 MVAAFLAMRLYAVLGKRTGHE-PLPRTADERIATPPVARPIEVTPEAR--------VLGP 51
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
+ + +R +++ FD F+ A+++Y I+++F++G +E L + V +
Sbjct: 52 RHVESGAESGLRSLIAADPSFDVAQFIEGAKSAYRMILEAFWKGDEATLEWLTERDVREA 111
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
F +++ R + + + LV I+ + AS+E +++R + + D + +++
Sbjct: 112 FAQAIADRNAAGHVLDNRLVSIERAVVTEASVEGGVARVSVRFDADIAAITRDAEGNIVA 171
Query: 198 SD 199
Sbjct: 172 GS 173
>gi|88608273|ref|YP_506249.1| Tim44-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600442|gb|ABD45910.1| Tim44-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 208
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 12 LILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
++L+A + FF+F +L G+ + + K + K+ ++
Sbjct: 2 ELILYAILVFFIFNRLYASFGRISVERELGFKAAEVKEILEKK-------------VRDI 48
Query: 72 DSINELFPIG-TRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D + P + ++I S++ DF F+ A ++E +F + + + KL
Sbjct: 49 DQFTYVAPSDLQEIVSAKKEIESLWKQDFSTDRFMEGAERAFEMFTKAFTDCDLKVLSKL 108
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + + ++ + RK ++ +LV + +I + + +Y T+R V + I+
Sbjct: 109 LSKKAFSVVSEKIEQRKIRGNTLERTLVALRSKNLIKLDVIKGVLYATVRFVSEQINVVR 168
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
D ++S D + + D W F R++ + +WV+
Sbjct: 169 DDAGRVLSGDHDTIEVIEDKWIFERSLKSPHNSWVVCE 206
>gi|254796736|ref|YP_003081572.1| hypothetical protein NRI_0348 [Neorickettsia risticii str.
Illinois]
gi|254589983|gb|ACT69345.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 208
Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 12 LILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
++L+A + FF+F +L G+ + F + + I+ KK +
Sbjct: 2 ELVLYAILVFFIFNRLYASFGR---------VSVERELGFKAAEVKEILE----KKVRAI 48
Query: 72 DSINELFPIG-TRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
D + P + ++I S++ DF F+ A ++E +F + + + KL
Sbjct: 49 DQFTYVAPSDLQEIVSAKKEIESLWKQDFSTDRFMEGAERAFEMFTKAFTDCDLKVLSKL 108
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + + ++ ++ RK ++ +LV + +I + + +Y T+R V + I+
Sbjct: 109 LSKKAFSVVSEKVAQRKIRGNTLERTLVALRSKNLIKLDVIKGVLYATVRFVSEQINVVR 168
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
D ++S D + + D W F R++ N +WV+
Sbjct: 169 DDAGRILSGDHDTIEVIEDKWVFERSLRSPNNSWVVCE 206
>gi|329847374|ref|ZP_08262402.1| tim44-like domain protein [Asticcacaulis biprosthecum C19]
gi|328842437|gb|EGF92006.1| tim44-like domain protein [Asticcacaulis biprosthecum C19]
Length = 212
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+++FA + + QL VLG+K G R E +T+ KG
Sbjct: 1 MVALIIFAIVAVVILFQLYNVLGRKVGF----------------RAEDKPVTV-KGDDFG 43
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+L + + P +R+ + + + +F+ +FL +AR SYE +V +F +G++ A++
Sbjct: 44 DLSTKTDKLPEASRMPN-LEMLKTRDANFNELNFLEKARESYEQVVIAFHKGELDAVKDK 102
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ VY F +L R + E+ + S V I + ++ I +R + + Y
Sbjct: 103 LSDTVYGIFAKALVGRAAPEETL--SFVDQPKADIDHIDFKDEVAQIRVRFLSEL---VY 157
Query: 190 DKDNLLISSD-----------PEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+K S + + WTF + + +N W+L +
Sbjct: 158 EKTEAPAESAVPPTKADAPKVHRSHKRTAEYWTFQKGMKVANSPWLLTKVEAA 210
>gi|317050977|ref|YP_004112093.1| import inner membrane translocase subunit Tim44 [Desulfurispirillum
indicum S5]
gi|316946061|gb|ADU65537.1| import inner membrane translocase subunit Tim44 [Desulfurispirillum
indicum S5]
Length = 249
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 14/229 (6%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
+S F I FI +F +R + G+ + N P + G +D + +
Sbjct: 28 NSATFSIFDILFIGAIIFFIVRALRGRTSRNNNPKDDWTLG---GKDQDSYSPTASNEPR 84
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
D I L+P T +K +R I +F DFL AR + + + ++ I
Sbjct: 85 TTPGADKITSLYPEQT-THKGLRPIEMSDPNFTEGDFLAAAREVFSTVQQAKANEELEQI 143
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E L+D + + ++T + K V+ I + +A + T IT++
Sbjct: 144 EFLMDKAMLNQLQEDIATWRKEGKRVQLDSATIHSALVADAIQQMGTDCITVKF-----E 198
Query: 187 ASYDKDNLL--ISSDPEIFGK-VIDIWTFVRNIPPSNPNWVLISTKLGE 232
A+ D+ L + +PE + V + W F+RNI W LI +
Sbjct: 199 ATLDRTFLPVDVEGEPEPVHETVTEYWRFMRNIG--EAAWQLIGVYDAD 245
>gi|261253352|ref|ZP_05945925.1| hypothetical protein VIA_003377 [Vibrio orientalis CIP 102891]
gi|260936743|gb|EEX92732.1| hypothetical protein VIA_003377 [Vibrio orientalis CIP 102891]
Length = 292
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R +LG K G+ + K ++ + + +
Sbjct: 98 ILIMGLIAFVIFKLMRSMLGAKQGSMNQQRQQPAFGGSAPKFEQPNVHNFEQPQNAPQGG 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++H IE+ V
Sbjct: 158 GFGFGAQTDVPHNYP--------PGFDQSAFINGSREHYRILQGAWNHNQLHTIEEYVSP 209
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y+D + R + ++ + D +I+ A + ++++ G++ A
Sbjct: 210 SLYEDLK---AERAKLNGEQHTDVMYV-DAEIVRADHDATKAQLSLQFSGRYRDAV---- 261
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I D + DIW R++ N W+++ +
Sbjct: 262 -EGIEED------ITDIWHLERDLTTPNAPWLIVGIQ 291
>gi|149192059|ref|ZP_01870285.1| hypothetical protein VSAK1_02529 [Vibrio shilonii AK1]
gi|148834122|gb|EDL51133.1| hypothetical protein VSAK1_02529 [Vibrio shilonii AK1]
Length = 294
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 30/222 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
IL+F I F +F +RG+LG K G ++P G + + + + G
Sbjct: 97 ILIFGLIAFVIFKFMRGMLGAKQGSMNQQRQQPAFGGNTRNQFEQQPNFQNFEQPQNGGA 156
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ FD FLN AR Y + ++ ++H IE
Sbjct: 157 ATGGFGAAGHSDVPHNYP----------PGFDQAAFLNGAREHYRILQGAWNHNELHTIE 206
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ V + QD ++ R E + ++ + D +I+ A + N ++++ G++ A
Sbjct: 207 EYVSPSLLQDL---MAERAKLEGEQHTDVMYV-DAEIVRADFDANKAQLSLQFSGRYRDA 262
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + D + DIW R++ N W+++ +
Sbjct: 263 VEN-----VEED------IEDIWHLERDLTVPNAPWLIVGIQ 293
>gi|260767913|ref|ZP_05876847.1| hypothetical protein VFA_000962 [Vibrio furnissii CIP 102972]
gi|260615943|gb|EEX41128.1| hypothetical protein VFA_000962 [Vibrio furnissii CIP 102972]
gi|315179616|gb|ADT86530.1| Tim44-like domain family [Vibrio furnissii NCTC 11218]
Length = 291
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + + F + ++ N+
Sbjct: 98 ILIIGLIAFVIFKLMRGLLGAKQGS---MNQHQQQQPAFGGMNRNTF-------EQPNVH 147
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ + G +++ D+ Y FD F+N AR Y + ++ ++ IE+ V
Sbjct: 148 NFEQPQNSGGFGSQMQSDVPHNYPDGFDRVAFVNGAREHYRILQGAWNHNQLETIEEYVS 207
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+++D + R + + ++ ++ + D +I+ A + N ++++ G++ S D
Sbjct: 208 PSLFEDLK---AERAKIDTDPQTDVMYV-DAEIVRADYDANKAQLSLQFSGRYRDPSEDL 263
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + DIW R++ N W+++ +
Sbjct: 264 EEN-----------IDDIWHLERDLTTPNAPWLIVGIQ 290
>gi|218460136|ref|ZP_03500227.1| hypothetical protein RetlK5_11796 [Rhizobium etli Kim 5]
Length = 121
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER--GIITLG 63
M S DF+ L F +F QLR VLG++TGNEKP ++ + ++TL
Sbjct: 1 MSSNDFITLFFLVAAVLIFFQLRSVLGRRTGNEKPPRDLYTPRDAAPAEAADAGKVVTLP 60
Query: 64 K----GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ G+ +D +I+ + GT LN+ +R + F+PK+FLN AR +YE IV ++
Sbjct: 61 RRDATGEDEDRFAAIDAVAAPGTPLNESLRALNKADPSFNPKEFLNGARMAYEMIVMAYA 120
Query: 120 E 120
+
Sbjct: 121 D 121
>gi|163803720|ref|ZP_02197579.1| hypothetical protein 1103602000427_AND4_04363 [Vibrio sp. AND4]
gi|159172471|gb|EDP57338.1| hypothetical protein AND4_04363 [Vibrio sp. AND4]
Length = 288
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
IL+ I F +F +RG+LG K G ++P G + K+ + ++
Sbjct: 96 ILIMGLIAFVIFKLMRGMLGAKQGTMNQHRQQPAFGGNASKFEQP--------NMQNFEQ 147
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ N GT DI Y FD F+N +R Y + ++ ++H I
Sbjct: 148 QPN--------SAGTGGFGSKTDIPHNYPPGFDQAAFVNGSREHYRTLQGAWNHNQLHTI 199
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E+ V ++ D + R + + ++ + D +I+ A + N ++++ G++
Sbjct: 200 EEYVSPSLFDDLK---AERAKLDGEQHTDVMYV-DAEIVRADYDANKAQLSLQFSGRYRD 255
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ + D + DIW R++ N W+++ +
Sbjct: 256 SV-----EGVEED------IQDIWHLERDLTVPNAPWLIVGIQ 287
>gi|28897713|ref|NP_797318.1| hypothetical protein VP0939 [Vibrio parahaemolyticus RIMD 2210633]
gi|28805926|dbj|BAC59202.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|328473305|gb|EGF44153.1| hypothetical protein VP10329_21550 [Vibrio parahaemolyticus 10329]
Length = 290
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 82/219 (37%), Gaps = 27/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G ++
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNASKFEQPNMQNFEQQPNTNAGG 155
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FTGFGAQTDVPHNYP----------PGFDQAAFINGSREHYRILQGAWNHNQLDTIEEYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D + R E + ++ + D +I+ A + N ++++ G++ A+
Sbjct: 206 SPSLFEDLK---AERAKLEGEQHTDVMYV-DAEIVRAEYDANKAQLSLQFSGRYRDAA-- 259
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ D + DIW R++ N W+++ +
Sbjct: 260 ---EGVEED------IEDIWHLERDLTVPNAPWLIVGIQ 289
>gi|269965560|ref|ZP_06179674.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829785|gb|EEZ84020.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 290
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 84/217 (38%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + SK ++ + + +N
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQPNMQNFEQQPNTNNGG 155
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FGGFGAQTDVPHNYP--------PGFDQAAFINGSREHYRILQGAWNHNQLETIEEYVSP 207
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+++D + R + + ++ + D +I+ A + N ++++ G++
Sbjct: 208 SLFEDLK---AERAKLDGEQHTDVMYV-DAEIVRADYDANKAQLSLQFSGRYR------- 256
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ E ++ DIW R++ N W+++ +
Sbjct: 257 -DTVEGVEE---EIEDIWHLERDLTAPNAPWLIVGIQ 289
>gi|254507626|ref|ZP_05119759.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus 16]
gi|219549513|gb|EED26505.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus 16]
Length = 292
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + K ++ + + ++ +
Sbjct: 98 ILIIGLIAFVIFKLMRGMLGAKQGSMNQQRQQPAFGGSAPKFEQPNVHNFEQPQQTGSQG 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 158 GFGFGSQTDVPHNYP--------PGFDHAAFINGSREHYRILQGAWNHNQLETIEEYVSP 209
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
++ L + ++ + + + V D +I+ A + + ++++ G++ A
Sbjct: 210 SLF----ADLKSERAKLEGEQHTDVMYVDAEIVRADYDASKAQLSLQFSGRYRDAV---- 261
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I D + DIW R++ N W+++ +
Sbjct: 262 -EGIEED------IADIWHLERDLTVPNAPWLIVGIQ 291
>gi|323491921|ref|ZP_08097090.1| hypothetical protein VIBR0546_04127 [Vibrio brasiliensis LMG 20546]
gi|323313779|gb|EGA66874.1| hypothetical protein VIBR0546_04127 [Vibrio brasiliensis LMG 20546]
Length = 292
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + K ++ + + +
Sbjct: 98 ILIMGLIAFVIFKLMRGMLGSKQGSMNKNRQQPAFGGSAPKFEQPNVHNFEQPQSGAQGG 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 158 GFGFGAQSDIPHNYP--------PGFDQTAFINGSREHYRILQGAWNHNQLETIEEYVSP 209
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+++D R E + ++ + D +I+ A + + ++++ G++ +
Sbjct: 210 SLFEDLKS---ERAKLEGEQHTDVMYV-DAEIVRADYDASKAQLSLQFSGRYRDSV---- 261
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + DIW R++ N W+++ +
Sbjct: 262 -EGIEEN------IEDIWHLERDLTTPNAPWLIVGIQ 291
>gi|260776293|ref|ZP_05885188.1| hypothetical protein VIC_001677 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607516|gb|EEX33781.1| hypothetical protein VIC_001677 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 292
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 83/217 (38%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ + F +F +RG+LG K G+ + K ++ + + + +
Sbjct: 98 ILIMGLVAFIIFKLMRGLLGSKQGSMNQQRQQPAFGGSAPKFEQPNVHNFEQQPQSGSQG 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 158 GFGFGAQSDIPHNYP--------PGFDKVAFINGSREHYRTLQGAWNHNQLDTIEEYVSP 209
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+++D + R E + ++ + D +I+ A + + ++++ G++ A + +
Sbjct: 210 SLFEDLK---AERAKLEGEQHTDVMYV-DAEIVRADYDASKAQLSLQFSGRYRDAVENVE 265
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ DIW R++ N W+++ +
Sbjct: 266 EN-----------IEDIWHLERDLTVPNAPWLIVGIQ 291
>gi|262394794|ref|YP_003286648.1| hypothetical protein VEA_004023 [Vibrio sp. Ex25]
gi|262338388|gb|ACY52183.1| hypothetical protein VEA_004023 [Vibrio sp. Ex25]
Length = 290
Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 83/217 (38%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + SK ++ + + +N
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQPNMQNFEQQPNTNNGG 155
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FGGFGAQTDVPHNYP--------PGFDQAAFINGSREHYRILQGAWNHNQLETIEEYVSP 207
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+++D + R + + ++ + D +I+ A N ++++ G++
Sbjct: 208 SLFEDLK---AERAKLDGEQHTDVMYV-DAEIVRADYNANKAQLSLQFSGRYR------- 256
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ E ++ DIW R++ N W+++ +
Sbjct: 257 -DTVEGVEE---EIEDIWHLERDLTVPNAPWLIVGIQ 289
>gi|86148689|ref|ZP_01066968.1| hypothetical protein MED222_20209 [Vibrio sp. MED222]
gi|218710150|ref|YP_002417771.1| hypothetical protein VS_2180 [Vibrio splendidus LGP32]
gi|85833536|gb|EAQ51715.1| hypothetical protein MED222_20209 [Vibrio sp. MED222]
gi|218323169|emb|CAV19346.1| hypothetical protein VS_2180 [Vibrio splendidus LGP32]
Length = 307
Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGN--------EKPFSGFFSGKYVFSKRDERGIITLGK 64
IL+ I F F LRG+LG K G+ ++P G + + + +
Sbjct: 99 ILIMGLIAFLAFKFLRGMLGAKQGSMNQQNARGQQPAFGGMGQNKFEQPKQQPNVHNFEQ 158
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKV 123
+ + S N G D+ Y FD F+N +R Y + ++ ++
Sbjct: 159 AQPQSQPHSQNS---AGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNEL 215
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
+ IE+ V +++D + R + + + ++ + D +I+ A + + ++++ G+
Sbjct: 216 NTIEEYVSPSLFEDLK---AERNKLDGDQHTDVMYV-DAEIVRADHDGSKAQLSLQFSGR 271
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ D I D + DIW R++ N W+++ +
Sbjct: 272 Y----RDTA-DGIEED------ITDIWHLERDLTTQNAPWLIVGIQ 306
>gi|260878333|ref|ZP_05890688.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus AN-5034]
gi|308092753|gb|EFO42448.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus AN-5034]
Length = 287
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 27/217 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G ++
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNASKFEQPNMQNFEQQPNTNAGG 155
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FTGFGAQTDVPHNYP----------PGFDQAAFINGSREHYRILQGAWNHNQLDTIEEYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D + R E + ++ + D +I+ A + N ++++ G++ A+
Sbjct: 206 SPSLFEDLK---AERAKLEGEQHTDVMYV-DAEIVRAEYDANKAQLSLQFSGRYRDAA-- 259
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ D + DIW R++ N W+++
Sbjct: 260 ---EGVEED------IEDIWHLERDLTVPNAPWLIVG 287
>gi|37679309|ref|NP_933918.1| hypothetical protein VV1125 [Vibrio vulnificus YJ016]
gi|320156948|ref|YP_004189327.1| hypothetical protein VVM_03684 [Vibrio vulnificus MO6-24/O]
gi|326424146|ref|NP_761953.2| hypothetical protein VV1_3163 [Vibrio vulnificus CMCP6]
gi|37198052|dbj|BAC93889.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319932260|gb|ADV87124.1| hypothetical protein VVMO6_02102 [Vibrio vulnificus MO6-24/O]
gi|319999531|gb|AAO11480.2| hypothetical protein VV1_3163 [Vibrio vulnificus CMCP6]
Length = 289
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 86/218 (39%), Gaps = 26/218 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+L K G+ + K ++ + +
Sbjct: 96 ILIIGLIAFVIFKLMRGLLASKQGSMNQHRQQPAFGGQAPKFEQSNVHNFEQSPNT---- 151
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
P G D+ Y FD F+N AR Y + ++ ++ IE+ V
Sbjct: 152 ------PTGGFGFGAQSDVPHNYPPGFDQVAFVNGAREHYRILQGAWNHNQLETIEEYVS 205
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+++D + R + + ++ + D +I+ A + +T +++++ G++ A
Sbjct: 206 PSLFEDLK---AERAKLDGEQHTDVMYV-DAQIVRADYDASTAHLSLQFSGRYRDAV--- 258
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I D + DIW R++ N W+++ +
Sbjct: 259 --EGIEED------ITDIWHLERDLTAPNAPWMIVGIQ 288
>gi|84387756|ref|ZP_00990772.1| hypothetical protein V12B01_05945 [Vibrio splendidus 12B01]
gi|84377439|gb|EAP94306.1| hypothetical protein V12B01_05945 [Vibrio splendidus 12B01]
Length = 302
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 88/223 (39%), Gaps = 25/223 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F F LRG+LG K G+ + + G + K++ N+
Sbjct: 98 ILIMGLIAFLAFKFLRGMLGAKQGS----MNQQNARGQQPAFGGMGQNKFEQPKQQPNVH 153
Query: 73 SINELFPIGTRLNKVMRDIVSVY------TDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ + P FD F+N +R Y + ++ +++ I
Sbjct: 154 NFEQAQPQSQGAAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELNTI 213
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E+ V +++D + R + + + ++ + D +I+ A + + ++++ G++
Sbjct: 214 EEYVSPSLFEDLK---AERNKLDGDQHTDVMYV-DAEIVRADHDGSKAQLSLQFSGRY-- 267
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
D + + + DIW R++ +N W+++ +
Sbjct: 268 --RDTADGVEE-------DITDIWHLERDLTTNNAPWLIVGIQ 301
>gi|148977909|ref|ZP_01814462.1| hypothetical protein VSWAT3_01775 [Vibrionales bacterium SWAT-3]
gi|145962855|gb|EDK28127.1| hypothetical protein VSWAT3_01775 [Vibrionales bacterium SWAT-3]
Length = 304
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 85/223 (38%), Gaps = 25/223 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F F LRG+LG K G+ + + G + ++ N+
Sbjct: 100 ILIMGLIAFLAFKFLRGMLGAKQGS----MNQQNARGQQPAFGGMGQNKFEQPTQQPNVH 155
Query: 73 SINELFPIGTRLNKVMRDIVSVY------TDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ + P FD F+N +R Y + ++ ++ I
Sbjct: 156 NFEQAQPQSQGTAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELSTI 215
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
E+ V +++D + R + + + ++ + D +I+ A + + ++++ G++
Sbjct: 216 EEYVSPSLFEDLK---AERSKLDGDQHTDVMYV-DAEIVRADHDGSKAQLSLQFSGRY-- 269
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
D I D + DIW R++ N W+++ +
Sbjct: 270 --RDSA-EGIEED------ITDIWHLERDLTTDNAPWLIVGIQ 303
>gi|323499402|ref|ZP_08104378.1| hypothetical protein VISI1226_21579 [Vibrio sinaloensis DSM 21326]
gi|323315587|gb|EGA68622.1| hypothetical protein VISI1226_21579 [Vibrio sinaloensis DSM 21326]
Length = 292
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 84/217 (38%), Gaps = 23/217 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + + + E+ + + + +
Sbjct: 98 ILIIGLIAFLIFKLMRGMLGAKQGSMNQHRQQPAFGGQSAPKFEQPNVHNFEQPQTGSQG 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 158 GFGFGGQTDVPHNYP--------PGFDHAAFINGSREHYRILQGAWNHNQLETIEEYVSP 209
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y+D + R + + ++ + D +I+ A + + ++++ G++ A
Sbjct: 210 SLYEDLK---AERAKLDGEQHTDVMYV-DAEIVRADYDASKAQLSLQFSGRYRDA----- 260
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ E + DIW R++ N W+++ +
Sbjct: 261 ---VEGVEEN---IEDIWHLERDLTTPNAPWLIVGIQ 291
>gi|261210612|ref|ZP_05924905.1| hypothetical protein VCJ_000865 [Vibrio sp. RC341]
gi|260840397|gb|EEX66968.1| hypothetical protein VCJ_000865 [Vibrio sp. RC341]
Length = 289
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+L K G+ + F + ++ N+
Sbjct: 96 ILIMGLIAFVIFKLMRGLLASKQGS----MNQSQQQPAFGGMNRTPF-------EQPNVH 144
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + DI Y FD F+N AR Y + ++ ++ I + V
Sbjct: 145 NFEQPQSMGGGFGSAAQSDIPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 204
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
++ D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 205 SPSLFDD----LKAERANYEGEQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 258
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 259 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 288
>gi|302773644|ref|XP_002970239.1| hypothetical protein SELMODRAFT_441105 [Selaginella moellendorffii]
gi|300161755|gb|EFJ28369.1| hypothetical protein SELMODRAFT_441105 [Selaginella moellendorffii]
Length = 257
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+ + + ++ K F EA + Y+ I G + + +LV + + + R++
Sbjct: 105 LAKLRKKHKGYNQKVFYREATDLYKEINKLSAAGDLGKLRRLVTEHFFSVIKNQIKQRQA 164
Query: 148 NEKNVKSSLVG-IDDMK--------IINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
V +VG I M+ I ++ V IT+RI I A+YDK+N +I
Sbjct: 165 AYSRVHWEMVGQIKLMRTLQGRLIGIDRKDLDNAFVQITLRIQSNQIFAAYDKNNNIIKG 224
Query: 199 DPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
D E V DIW F +++ + W L
Sbjct: 225 DLEKPLLVEDIWIFEKHLTRPDSTWRLCG 253
>gi|258626499|ref|ZP_05721339.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258581210|gb|EEW06119.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 290
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+L K G+ + +S + ++ N+
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGS----MNQSQQQPAYSGMNRTSF-------EQPNVH 145
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 146 NFEQPQSMGGGFGSAAQSDVPHNYPVGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 206 SPSLFEDLQAE----RANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 259
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 260 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 289
>gi|258621272|ref|ZP_05716306.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|262171047|ref|ZP_06038725.1| hypothetical protein VII_001862 [Vibrio mimicus MB-451]
gi|258586660|gb|EEW11375.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261892123|gb|EEY38109.1| hypothetical protein VII_001862 [Vibrio mimicus MB-451]
Length = 290
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+L K G+ + +S + ++ N+
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGS----MNQSQQQPAYSGMNRTSF-------EQPNVH 145
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 146 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 206 SPSLFEDLQAE----RANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 259
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 260 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 289
>gi|262166075|ref|ZP_06033812.1| hypothetical protein VMA_002525 [Vibrio mimicus VM223]
gi|262025791|gb|EEY44459.1| hypothetical protein VMA_002525 [Vibrio mimicus VM223]
Length = 290
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+L K G+ + +S + ++ N+
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGS----MNQSQQQPAYSGMNRTSF-------EQPNVH 145
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 146 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 206 SPSLFEDLQAE----RANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 259
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 260 ---EGIEEN------IEDVWHLERDLTVQNAPWLIVGIQ 289
>gi|302793266|ref|XP_002978398.1| hypothetical protein SELMODRAFT_418250 [Selaginella moellendorffii]
gi|300153747|gb|EFJ20384.1| hypothetical protein SELMODRAFT_418250 [Selaginella moellendorffii]
Length = 260
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+ + + ++ K F EA + Y+ I G + + +LV + + + R++
Sbjct: 108 LAKLRKKHKGYNQKVFYREATDLYKEINKLSAAGDLGKLRRLVTEHFFSVIKNQIKQRQA 167
Query: 148 NEKNVKSSLVG-IDDMK--------IINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
V +VG I M+ I ++ V IT+RI I A+YDK+N +I
Sbjct: 168 AYSRVHWEMVGQIKLMRTLQGRLIGIDRKDLDNAFVQITLRIQSNQIFAAYDKNNNIIKG 227
Query: 199 DPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
D E V DIW F +++ + W L
Sbjct: 228 DLEKPLLVEDIWIFEKHLTRPDSTWRLCG 256
>gi|229515345|ref|ZP_04404805.1| hypothetical protein VCB_003002 [Vibrio cholerae TMA 21]
gi|229348050|gb|EEO13009.1| hypothetical protein VCB_003002 [Vibrio cholerae TMA 21]
Length = 291
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSVGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 207 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 261 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|312882412|ref|ZP_07742153.1| hypothetical protein VIBC2010_18049 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369812|gb|EFP97323.1| hypothetical protein VIBC2010_18049 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 281
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 25/219 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +R +LG K G N+ F G ++ + +
Sbjct: 85 ILIMGIIAFVIFKLVRAMLGAKQGSLNQHRQQPAFGGSASKFEQPNVNQFKEQQQPTTNQ 144
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 145 TGGFGFSAQSDVPHNYP--------PGFDNAAFVNGSREHYRLLQGAWNHNQLDTIEEYV 196
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
++ D R + V D +I+ A + + ++++ G++
Sbjct: 197 SQSLFDDLKT---ERAKLSGEQHTD-VMFVDAEIVRADYDASKAQLSLQFSGRYRDTV-- 250
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I D + DIW R++ N W+++ +
Sbjct: 251 ---EGIEED------ITDIWHLERDLTTPNAPWLIVGIQ 280
>gi|262404319|ref|ZP_06080874.1| hypothetical protein VOA_002310 [Vibrio sp. RC586]
gi|262349351|gb|EEY98489.1| hypothetical protein VOA_002310 [Vibrio sp. RC586]
Length = 290
Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+L K G+ + +S + ++ N+
Sbjct: 97 ILIMGLIAFVIFKLMRGLLASKQGS----MNHSQQQPAYSGMNRTSF-------EQPNVH 145
Query: 73 SINELFPIGTRLNK-VMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 146 NFEQPQSMGGGFGSTAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + V D +I+ A + N ++++ G++ A
Sbjct: 206 SPSLFED----LKAERANYAGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 259
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 260 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 289
>gi|229529012|ref|ZP_04418402.1| hypothetical protein VCG_002105 [Vibrio cholerae 12129(1)]
gi|229332786|gb|EEN98272.1| hypothetical protein VCG_002105 [Vibrio cholerae 12129(1)]
Length = 291
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----LNQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 207 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 261 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|229521878|ref|ZP_04411295.1| hypothetical protein VIF_002420 [Vibrio cholerae TM 11079-80]
gi|229340803|gb|EEO05808.1| hypothetical protein VIF_002420 [Vibrio cholerae TM 11079-80]
Length = 291
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSMGGGFGSAAQSDVPHNYPVGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 207 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 261 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|254286893|ref|ZP_04961845.1| hypothetical protein A33_1875 [Vibrio cholerae AM-19226]
gi|150423043|gb|EDN14992.1| hypothetical protein A33_1875 [Vibrio cholerae AM-19226]
Length = 291
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 207 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 261 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|15641966|ref|NP_231598.1| hypothetical protein VC1964 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590647|ref|ZP_01677981.1| hypothetical protein VC274080_2004 [Vibrio cholerae 2740-80]
gi|121728634|ref|ZP_01681653.1| hypothetical protein VCV52_1929 [Vibrio cholerae V52]
gi|147674189|ref|YP_001217491.1| hypothetical protein VC0395_A1550 [Vibrio cholerae O395]
gi|153217402|ref|ZP_01951153.1| hypothetical protein A55_2172 [Vibrio cholerae 1587]
gi|153801838|ref|ZP_01956424.1| hypothetical protein A51_B2032 [Vibrio cholerae MZO-3]
gi|153822436|ref|ZP_01975103.1| hypothetical protein A5E_2262 [Vibrio cholerae B33]
gi|229507945|ref|ZP_04397450.1| hypothetical protein VCF_003177 [Vibrio cholerae BX 330286]
gi|229511819|ref|ZP_04401298.1| hypothetical protein VCE_003228 [Vibrio cholerae B33]
gi|229518956|ref|ZP_04408399.1| hypothetical protein VCC_002983 [Vibrio cholerae RC9]
gi|229523980|ref|ZP_04413385.1| hypothetical protein VCA_001559 [Vibrio cholerae bv. albensis
VL426]
gi|229607490|ref|YP_002878138.1| hypothetical protein VCD_002402 [Vibrio cholerae MJ-1236]
gi|254226808|ref|ZP_04920380.1| hypothetical protein VCV51_1323 [Vibrio cholerae V51]
gi|254849050|ref|ZP_05238400.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745285|ref|ZP_05419234.1| hypothetical protein VCH_001631 [Vibrio cholera CIRS 101]
gi|262156009|ref|ZP_06029129.1| hypothetical protein VIG_001228 [Vibrio cholerae INDRE 91/1]
gi|262167916|ref|ZP_06035616.1| hypothetical protein VIJ_001090 [Vibrio cholerae RC27]
gi|297579473|ref|ZP_06941401.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|9656503|gb|AAF95112.1| hypothetical protein VC_1964 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547490|gb|EAX57596.1| hypothetical protein VC274080_2004 [Vibrio cholerae 2740-80]
gi|121629097|gb|EAX61542.1| hypothetical protein VCV52_1929 [Vibrio cholerae V52]
gi|124113586|gb|EAY32406.1| hypothetical protein A55_2172 [Vibrio cholerae 1587]
gi|124122610|gb|EAY41353.1| hypothetical protein A51_B2032 [Vibrio cholerae MZO-3]
gi|125620655|gb|EAZ49017.1| hypothetical protein VCV51_1323 [Vibrio cholerae V51]
gi|126520012|gb|EAZ77235.1| hypothetical protein A5E_2262 [Vibrio cholerae B33]
gi|146316072|gb|ABQ20611.1| hypothetical protein VC0395_A1550 [Vibrio cholerae O395]
gi|227013861|gb|ACP10071.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229337561|gb|EEO02578.1| hypothetical protein VCA_001559 [Vibrio cholerae bv. albensis
VL426]
gi|229343645|gb|EEO08620.1| hypothetical protein VCC_002983 [Vibrio cholerae RC9]
gi|229351784|gb|EEO16725.1| hypothetical protein VCE_003228 [Vibrio cholerae B33]
gi|229355450|gb|EEO20371.1| hypothetical protein VCF_003177 [Vibrio cholerae BX 330286]
gi|229370145|gb|ACQ60568.1| hypothetical protein VCD_002402 [Vibrio cholerae MJ-1236]
gi|254844755|gb|EET23169.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737115|gb|EET92511.1| hypothetical protein VCH_001631 [Vibrio cholera CIRS 101]
gi|262023643|gb|EEY42344.1| hypothetical protein VIJ_001090 [Vibrio cholerae RC27]
gi|262030187|gb|EEY48831.1| hypothetical protein VIG_001228 [Vibrio cholerae INDRE 91/1]
gi|297537067|gb|EFH75900.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 291
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 207 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 261 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|262276258|ref|ZP_06054067.1| hypothetical protein VHA_003243 [Grimontia hollisae CIP 101886]
gi|262220066|gb|EEY71382.1| hypothetical protein VHA_003243 [Grimontia hollisae CIP 101886]
Length = 295
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 24/218 (11%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGN-EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
L+ A I F +F + ++ K G+ +P ++G K+ G ++
Sbjct: 101 LIIALIAFVLFKIFKSLMAAKNGSINRPHQQAYAGNPSPQKK--------GYYHEQPQFR 152
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
G + +FD F+N AR Y + ++ ++ I++ V
Sbjct: 153 ESAATSSTGGFGAVNNDVPFNFPPNFDMSAFVNGAREHYRTLQGAWNHNELETIQEYVTP 212
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y D R+ + + ++ + D +I+ A + ++++ G++ D+
Sbjct: 213 ELYNDLA---EERRKLDGEQHTEVMYV-DAEIVRADYDGKRAQLSLQFSGRY----CDRH 264
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I D + DIW R++ N W+++ +
Sbjct: 265 -EGIEED------ITDIWHLERDMTLPNAPWLIVGIQA 295
>gi|327484501|gb|AEA78908.1| hypothetical protein VCLMA_A1705 [Vibrio cholerae LMA3894-4]
Length = 291
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 207 SPSLFED----LKAERANYEGDQHTNVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 261 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 290
>gi|59712270|ref|YP_205046.1| Tim44-like domain-contain protein [Vibrio fischeri ES114]
gi|59480371|gb|AAW86158.1| Tim44-like domain family [Vibrio fischeri ES114]
Length = 297
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 20/219 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ A I F +F R ++ K G+ G + + + + D
Sbjct: 98 ILIMAGIAFILFKVFRSMMAAKAGSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQAT 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ P G D+ Y FD + F+N +R Y + ++ ++ I++ V
Sbjct: 158 A----QPTGGFGAASADDVPHNYPPGFDMQAFINGSREHYRILQGAWNHNQLETIQEYVS 213
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y D + R + E + ++ + D +++ A + N ++++ G++ A
Sbjct: 214 ISLYNDL---VQERATLEGEQHTDVMYV-DAEVVRADYDANRAQLSLQFSGRYRDAV--- 266
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I D + DIW R++ N W++I +
Sbjct: 267 --EGIEED------ITDIWHLERDLTQPNAPWLIIGIQA 297
>gi|153826379|ref|ZP_01979046.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739857|gb|EDM54048.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 223
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 30 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 78
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 79 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 138
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 139 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 192
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 193 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 222
>gi|153820281|ref|ZP_01972948.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126509172|gb|EAZ71766.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
Length = 239
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 46 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 94
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 95 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 154
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+++D L ++N + + + V D +I+ A + N ++++ G++ A
Sbjct: 155 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAV-- 208
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + + D+W R++ N W+++ +
Sbjct: 209 ---EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 238
>gi|197334926|ref|YP_002156484.1| import inner membrane translocase, subunit Tim44 [Vibrio fischeri
MJ11]
gi|197316416|gb|ACH65863.1| import inner membrane translocase, subunit Tim44 [Vibrio fischeri
MJ11]
Length = 297
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 84/219 (38%), Gaps = 20/219 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ A I F +F R ++ K G+ G + + + + D
Sbjct: 98 ILIMAGIAFILFKVFRSMMAAKAGSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQAT 157
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
P G D+ Y FD + F+N +R Y + ++ ++ I++ V
Sbjct: 158 ----TQPTGGFGAASADDVPHNYPPGFDMQSFINGSREHYRILQGAWNHNQLETIQEYVS 213
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y D + R + E + ++ + D +++ A + N ++++ G++ A
Sbjct: 214 ISLYNDL---VQERATLEGEQHTDVMYV-DAEVVRADHDANRAQLSLQFSGRYRDAV--- 266
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I D + DIW R++ N W++I +
Sbjct: 267 --EGIEED------ITDIWHLERDLTQPNAPWLIIGIQA 297
>gi|269961023|ref|ZP_06175392.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834242|gb|EEZ88332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 303
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 32/222 (14%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
IL+ I F +F +RG+LG K G ++P G + K+
Sbjct: 108 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQPNMQNFEQQPNNTNAG 167
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
P FD F+N +R Y + ++ ++H IE
Sbjct: 168 GFGGFGAQTDIPHNYP------------PGFDQAAFINGSREHYRILQGAWNHNQLHTIE 215
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ V +++D + R + + ++ + D +I+ A + N ++++ G++ A
Sbjct: 216 EYVSPSLFEDLK---AERAKLDGEQHTDVMYV-DAEIVRADYDANKAQLSLQFSGRYRDA 271
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
I + DIW R++ N W+++ +
Sbjct: 272 E-----------EGIEEDIEDIWHLERDLTVPNAPWLIVGIQ 302
>gi|156973734|ref|YP_001444641.1| hypothetical protein VIBHAR_01439 [Vibrio harveyi ATCC BAA-1116]
gi|156525328|gb|ABU70414.1| hypothetical protein VIBHAR_01439 [Vibrio harveyi ATCC BAA-1116]
Length = 290
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 88/225 (39%), Gaps = 39/225 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFSKR---DERGIITLGK 64
IL+ I F +F +RG+LG K G ++P G + K+ +++ G
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQPNMQNFEQQPNTNAGG 155
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+ I +P FD F+N +R Y + ++ ++H
Sbjct: 156 FGGFGSQTDIPHNYP----------------PGFDQAAFINGSREHYRILQGAWNHNQLH 199
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
IE+ V +++D + R + + ++ + D +I+ A + + ++++ G++
Sbjct: 200 TIEEYVSPSLFEDLK---AERAKLDGEQHTDVMYV-DAEIVRADYDASKAQLSLQFSGRY 255
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
A I + DIW R++ N W+++ +
Sbjct: 256 RDAE-----------EGIEEDIEDIWHLERDLTVPNAPWLIVGIQ 289
>gi|90410802|ref|ZP_01218817.1| hypothetical protein P3TCK_27197 [Photobacterium profundum 3TCK]
gi|90328433|gb|EAS44731.1| hypothetical protein P3TCK_27197 [Photobacterium profundum 3TCK]
Length = 300
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 85/222 (38%), Gaps = 33/222 (14%)
Query: 13 ILLFAFITFFVFLQL----RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
IL+F I FV +L RG G TG+ + S + + + + + ++
Sbjct: 108 ILIFGLIA-FVIFKLFKTMRGAKGTPTGH-REAYAGNSPQQQNNTQQRQQASEMNAAPQQ 165
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
S + P +F+ FL+ AR+ Y + ++ ++ I +
Sbjct: 166 SGYASTDSDVPFNLP------------PNFNMNAFLSGARDHYRILQGAWNHNELDKIRE 213
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V + D + R E + ++ + D +++ A + N ++I+ G++
Sbjct: 214 YVSPALLADLT---AERAKLEGEQHTEVMYV-DTEMVRADFDANLAQLSIQFSGRY---- 265
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D++ E + D+W R++ N W+++ +
Sbjct: 266 KDRNE-------EHEADITDVWHLERDLRTPNAPWLIVGIQA 300
>gi|54309778|ref|YP_130798.1| hypothetical protein PBPRA2617 [Photobacterium profundum SS9]
gi|46914216|emb|CAG20996.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 289
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 85/222 (38%), Gaps = 33/222 (14%)
Query: 13 ILLFAFITFFVFLQL----RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
IL+F I FV +L RG G TG+ + S + + + + + ++
Sbjct: 97 ILIFGLIA-FVIFKLFKTMRGAKGTPTGH-REAYAGNSPQQQNNTQQRQQAPEMNAAPQQ 154
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
S + P +F+ FL+ AR+ Y + ++ ++ I +
Sbjct: 155 SGYASTDSDVPFNLP------------PNFNMNAFLSGARDHYRILQGAWNHNELDKIRE 202
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V + D + R E + ++ + D +++ A + N ++I+ G++
Sbjct: 203 YVSPALLADLT---AERAKLEGEQHTEVMYV-DTEMVRADFDANLAQLSIQFSGRY---- 254
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D++ E + D+W R++ N W+++ +
Sbjct: 255 KDRNE-------EHEADITDVWHLERDLRTPNAPWLIVGIQA 289
>gi|117923796|ref|YP_864413.1| import inner membrane translocase, subunit Tim44 [Magnetococcus sp.
MC-1]
gi|117607552|gb|ABK43007.1| import inner membrane translocase, subunit Tim44 [Magnetococcus sp.
MC-1]
Length = 331
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 86/217 (39%), Gaps = 5/217 (2%)
Query: 20 TFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIIT----LGKGKKKDNLDSIN 75
VF ++ +G + ++ G Y ++ + + +G + +
Sbjct: 116 AAGVFFLVKRFMGTRPPADEAAYARSHGAYRPQPQEMDQPMQREMHMPQGLPMGSGSDVE 175
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
+ R + + +++ ++FD F++ A+ +E + S+ + ++ L+ ++
Sbjct: 176 DFSAQDER-QQTLDRLLAEDSNFDEFTFIDGAKRCFEMLQTSWSTFDMTTLQGLLTPQMM 234
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
++ + ++N + V + ++ A E+ Y+T+R + D +
Sbjct: 235 EEVENHARQLQANGQRDVVKNVHFSEAALVEAWSEQGQDYLTVRFDVSLVEYVEDASGQV 294
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+S D +V + W F R NPNW L + + +
Sbjct: 295 VSGDANHPQQVQEFWVFTRAQGARNPNWQLSAIQQAQ 331
>gi|330446574|ref|ZP_08310226.1| tim44-like domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490765|dbj|GAA04723.1| tim44-like domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 290
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 83/222 (37%), Gaps = 32/222 (14%)
Query: 13 ILLFAFITFFVFLQL----RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
IL+ I FV +L R G G+ + ++G + ++ R +
Sbjct: 97 ILIIGVIA-FVLFKLFKAMRANKGTPMGHRESYAGNSPQQPQQPQQQYRQAAGAQSQPQN 155
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+S + P +F+ FL+ +R+ Y I ++ ++ I +
Sbjct: 156 GGFESTDSDVPFNLP------------PNFNMNAFLSGSRDHYRIIQGAWNHNELEKIRE 203
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ D + R + ++ + D +++ A + NT ++I+ G++ +
Sbjct: 204 YVSPALFADLE---AERAKLSGEQHTEVMYV-DAELVRADYDANTAQLSIKFSGRYKDSV 259
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + D+W R++ N W+++ +
Sbjct: 260 -----EGVEED------ITDVWHLERDLKTPNAPWLIVGIQA 290
>gi|269102148|ref|ZP_06154845.1| hypothetical protein VDA_001568 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162046|gb|EEZ40542.1| hypothetical protein VDA_001568 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 272
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 82/221 (37%), Gaps = 35/221 (15%)
Query: 13 ILLFAFITFFVFLQLRGVL---GKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
IL+ I F +F L+G+ G G+ + ++G + + R
Sbjct: 84 ILIIGVIAFVIFKLLKGMRANKGTPMGHREAYAGNSPQQRNQQQAQFRQAANGASTGFSP 143
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ D + P +F+ FLN +R Y I +++ + + I +
Sbjct: 144 DSD-VPFNLP----------------PNFNLNAFLNGSREHYRTIQEAWNKNDLAKIREY 186
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V + D ++ R + ++ + D +++ A + N ++I+ G++
Sbjct: 187 VSPALLNDL---MAERAKLNGEQHTEVMYV-DAEVVRADYDANMAQLSIQFSGRY----K 238
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + D + D+W R++ N W+++ +
Sbjct: 239 DSH-EGVEED------ITDVWHLERDLRTPNAPWLIVGIQA 272
>gi|260773108|ref|ZP_05882024.1| hypothetical protein VIB_001575 [Vibrio metschnikovii CIP 69.14]
gi|260612247|gb|EEX37450.1| hypothetical protein VIB_001575 [Vibrio metschnikovii CIP 69.14]
Length = 289
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 87/218 (39%), Gaps = 29/218 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+F I F +F R L K G+ P ++ + + +++
Sbjct: 99 ILIFGLIGFALFKLARHFLAGKQGSLNPRQPAYNTNVHRQ--------SFEQAPEQE--- 147
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ + + D+ Y FD F+N +R Y + ++ ++ IE+ V
Sbjct: 148 --FKPAASSGFGSTMHNDVPHNYPPGFDKIAFINGSREHYRILQGAWNHNQLETIEEYVS 205
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ D + R+ ++ ++ ++ + D +I+ A ++ ++++ G+
Sbjct: 206 QSLFSDLK---AEREKLDQQPQTEVMYV-DAEIVRADYDDRKAQLSLQFTGRCRDL---- 257
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
D E +++DIW R++ N W+++ +
Sbjct: 258 ------GD-ETEEEILDIWHLERDLTQPNAPWLIVGIQ 288
>gi|153002504|ref|YP_001368185.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS185]
gi|151367122|gb|ABS10122.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS185]
Length = 287
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 85/221 (38%), Gaps = 30/221 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---SKRDERGIITLGKGKKKD 69
IL+ + F +F +R V+ KTG ++ + +G+ ++ E+ + +
Sbjct: 94 ILIIGLLAFVIFKIVRTVMASKTGAQQRPAYAGAGQPNPNMQRQQTEQTGFAINTNSGSN 153
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
P FD FL AR+ Y+ + ++ E + I++
Sbjct: 154 GFGQATSAVPFDLPA------------GFDLPGFLEGARSHYKTLQLAWNENDLSKIQEY 201
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +Y + ++ R+ + + V D +++ A+ N ++++ G++
Sbjct: 202 VSIDLYNELSN--QRRELVGD--QHTEVMFLDAELVRATHNANLAEVSVKFSGRYRDTV- 256
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + +IW RN+ +N W+++ +
Sbjct: 257 ----EGVEED------IKEIWHLERNVTQANSPWLIVGIEQ 287
>gi|90579259|ref|ZP_01235069.1| hypothetical protein VAS14_06118 [Vibrio angustum S14]
gi|90440092|gb|EAS65273.1| hypothetical protein VAS14_06118 [Vibrio angustum S14]
Length = 291
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 84/223 (37%), Gaps = 33/223 (14%)
Query: 13 ILLFAFITFFVFLQL----RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL-GKGKK 67
IL+ I FV +L R G G+ + ++G + + + T +
Sbjct: 97 ILIIGVIA-FVLFKLFKAMRANKGTPMGHRESYAGNSPRQQPQQAQQQYRQATGSQSQPQ 155
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+S + P +F+ FL+ +R+ Y I ++ ++ I+
Sbjct: 156 NGGFESTDSDVPFNLP------------PNFNMNAFLSGSRDHYRIIQGAWNHNELAKIK 203
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ V ++ D + R + ++ + D +++ A + N+ ++I+ G++
Sbjct: 204 EYVSPALFADLQ---AERAKLSGEQHTEVMYV-DAELVRADYDANSAQLSIKFSGRY--- 256
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D I D + D+W R++ N W+++ +
Sbjct: 257 -KDTQ-EGIEED------INDVWHLERDLKTPNAPWLIVGIQA 291
>gi|89073249|ref|ZP_01159779.1| hypothetical protein SKA34_19790 [Photobacterium sp. SKA34]
gi|89050959|gb|EAR56423.1| hypothetical protein SKA34_19790 [Photobacterium sp. SKA34]
Length = 291
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 85/222 (38%), Gaps = 31/222 (13%)
Query: 13 ILLFAFITFFVFLQLRGVL---GKKTGNEKPFSGFFSGKYVFSKRDERGIITL-GKGKKK 68
IL+ I F +F + + G G+ + ++G + + + T +
Sbjct: 97 ILIIGVIAFVLFKLFKAMRTNKGTSMGHRESYAGNSPRQQPQQAQQQYRQATGSQSQPQN 156
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+S + P +F+ FL+ +R+ Y I ++ ++ I++
Sbjct: 157 GGFESTDSDVPFNLP------------PNFNMNSFLSGSRDHYRIIQGAWNHNELAKIKE 204
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V S ++ D + R + ++ + D +++ A + N+ ++I+ G++
Sbjct: 205 YVSSALFADLQ---AERAKLSGEQHTEVMYV-DAELVRADYDANSAQLSIQFSGRY---- 256
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D I D + D+W R++ N W+++ +
Sbjct: 257 KDSQ-EGIEED------INDVWHLERDLKTPNAPWLIVGIQA 291
>gi|209694565|ref|YP_002262493.1| putative transport protein [Aliivibrio salmonicida LFI1238]
gi|208008516|emb|CAQ78689.1| putative transport protein [Aliivibrio salmonicida LFI1238]
Length = 316
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 84/219 (38%), Gaps = 18/219 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I++ A + F +F R + K G+ G S ++ + + D
Sbjct: 115 IIIMAGVAFVLFKLFRMFMASKAGSINQRQGAAYAGPQASHDEKPSFRDNQQYFQGDQAQ 174
Query: 73 SINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ G + ++ Y FD + F+N +R Y + ++ ++ I++ V
Sbjct: 175 PQTQT--TGGFGSIGSDEVPHNYPPGFDLQGFINGSREHYRILQGAWNHNQLETIQEYVS 232
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
+Y D ++N + + + V D +++ A ++ ++++ G++ D
Sbjct: 233 ISLYNDLVQE----RANLEGEQHTDVMFVDAEVVRAEHNASSAQLSLQFSGRY----RDS 284
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ E + D+W R++ N W++I +
Sbjct: 285 ----VEGLQE---DITDVWHLERDLTQPNAPWLIIGIQA 316
>gi|146294690|ref|YP_001185114.1| import inner membrane translocase subunit Tim44 [Shewanella
putrefaciens CN-32]
gi|145566380|gb|ABP77315.1| import inner membrane translocase, subunit Tim44 [Shewanella
putrefaciens CN-32]
gi|319427926|gb|ADV56000.1| import inner membrane translocase subunit Tim44 [Shewanella
putrefaciens 200]
Length = 291
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFS-KRDERGIITLGKGKKKDNL 71
IL+ + F +F +R V+ K G + + +G+ + +R + +
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQPRPAYAGAGQPSPNLQRQQTEQTGFASNATNNAN 153
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ + + + + FD FL AR+ Y+ + ++ E + I++ V
Sbjct: 154 SGSHGVAQAASDVPFNLPA------GFDLPSFLEGARSHYKTLQLAWNENDLSKIQEYVS 207
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ + ++ R+ + + + V D +++ A+ N ++++ G++
Sbjct: 208 IELFNELSN--QRRELVGE--QHTEVMFLDAELVRATHTANLAEVSVKFSGRYRDTV--- 260
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + ++W RN+ +N W+++ +
Sbjct: 261 --ECVEED------IKEVWHLERNVAQANSPWLIVGIEQ 291
>gi|304412224|ref|ZP_07393833.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS183]
gi|307306968|ref|ZP_07586708.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
BA175]
gi|304349490|gb|EFM13899.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS183]
gi|306910546|gb|EFN40976.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
BA175]
Length = 287
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 87/220 (39%), Gaps = 28/220 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ + F +F +R V+ K G ++ + +G+ + + +++
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQ-----------RQQAEQT 142
Query: 73 SINELFPIGTR-LNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
G+ + + FD FL AR+ Y+ + ++ E + I++ V
Sbjct: 143 GFATNANSGSNGFGQATSAVPFDLPAGFDLPGFLEGARSHYKTLQLAWNENDLSKIQEYV 202
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+Y + ++ R+ + + V D +++ A+ N ++++ G++
Sbjct: 203 SIDLYNELSN--QRRELVGD--QHTEVMFLDAELVRATHNANLAEVSVKFSGRYR----- 253
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ E ++ +IW RN+ +N W+++ +
Sbjct: 254 ---DTVEGVEE---EIKEIWHLERNVTQANSPWLIVGIEQ 287
>gi|304311556|ref|YP_003811154.1| hypothetical protein HDN1F_19260 [gamma proteobacterium HdN1]
gi|301797289|emb|CBL45509.1| Hypothetical protein HDN1F_19260 [gamma proteobacterium HdN1]
Length = 324
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 25/228 (10%)
Query: 13 ILLFAFITFFVFLQLR---------GVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLG 63
IL+FA + F +F LR + G G + + + +G
Sbjct: 111 ILIFALLGFVIFKLLRRRQQQRATPAMAGAGGGRFDVPEPANAPQERRTFDLGNPDEKVG 170
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGK 122
S + T + FD FL AR Y I +++ +G
Sbjct: 171 AAAASAPAFSPSAAAATDTLGWGNETSVPFNLPAGFDMNSFLTGAREHYRTIQEAWNKGN 230
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ + + + ++ + + R + + + V D +++ A +++R G
Sbjct: 231 LETLREYLAPELFDALS---AERATLKGEQHTE-VMFVDAELVRADQNATLAEVSLRFSG 286
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ + + + D+W R++ + W+++ +
Sbjct: 287 RYRDQT--------EGVEDA---ITDVWHLERDLSKPDQPWLIVGIEE 323
>gi|217975072|ref|YP_002359823.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS223]
gi|217500207|gb|ACK48400.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS223]
Length = 287
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 87/220 (39%), Gaps = 28/220 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ + F +F +R V+ K G ++ + +G+ + + +++
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQ-----------RQQAEQT 142
Query: 73 SINELFPIGTR-LNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
G+ + + FD FL AR+ Y+ + ++ E + I++ V
Sbjct: 143 GFATNANSGSNGFGQAKSAVPFDLPAGFDLPGFLEGARSHYKTLQLAWNENDLIKIQEYV 202
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+Y + ++ R+ + + V D +++ A+ N ++++ G++
Sbjct: 203 SIELYNELSN--QRRELVGD--QHTEVMFLDAELVRATHNANLAEVSVKFSGRYR----- 253
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ E ++ +IW RN+ +N W+++ +
Sbjct: 254 ---DTVEGVEE---EIKEIWHLERNVTQANSPWLIVGIEQ 287
>gi|160877221|ref|YP_001556537.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS195]
gi|160862743|gb|ABX51277.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS195]
gi|315269425|gb|ADT96278.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS678]
Length = 287
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 83/221 (37%), Gaps = 30/221 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVF---SKRDERGIITLGKGKKKD 69
IL+ + F +F +R V+ K G ++ + +G+ ++ E+ +
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQRQQTEQTGFATNTNSGSN 153
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
P FD FL AR+ Y+ + ++ E + I++
Sbjct: 154 GFGQATSAVPFDLPA------------GFDLPSFLEGARSHYKTLQLAWNENDLSKIQEY 201
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V +Y + ++ R+ + + V D +++ A+ N ++++ G++
Sbjct: 202 VSIELYNELSN--QRRELVGD--QHTEVMFLDAELVRATHNANLAEVSVKFSGRYRDTV- 256
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + +IW RN+ +N W+++ +
Sbjct: 257 ----EGVEED------IKEIWHLERNVTQANSPWLIVGVEQ 287
>gi|126176210|ref|YP_001052359.1| import inner membrane translocase subunit Tim44 [Shewanella baltica
OS155]
gi|125999415|gb|ABN63490.1| import inner membrane translocase, subunit Tim44 [Shewanella
baltica OS155]
Length = 287
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 85/220 (38%), Gaps = 28/220 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ + F +F +R V+ K G ++ + +G+ + + +++
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQ-----------RQQAEQT 142
Query: 73 SINELFPIGTR-LNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
G+ + + FD FL AR+ Y+ + ++ E + I++ V
Sbjct: 143 GFATNANSGSNGFGQATSAVPFDLPAGFDLPGFLEGARSHYKTLQLAWNENDLRKIQEYV 202
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+Y + ++ R+ + + V D +++ A+ N ++++ G++
Sbjct: 203 SIDLYNELSN--QRRELVGD--QHTEVMFLDAELVRATHNANLAEVSVKFSGRYRDTV-- 256
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + +IW RN+ N W+++ +
Sbjct: 257 ---EGVEED------IKEIWHLERNVTQVNSPWLIVGIEQ 287
>gi|24375821|ref|NP_719864.1| hypothetical protein SO_4340 [Shewanella oneidensis MR-1]
gi|24350775|gb|AAN57308.1|AE015867_7 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 291
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 84/218 (38%), Gaps = 24/218 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ A + F +F +R V+ K + ++G + +R N
Sbjct: 98 ILIIALLAFVLFKIVRTVMASKASAQ--PRPAYAGAGQPNPNLQRQQAEQTGFASSAN-S 154
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N + + + FD FL AR+ Y+ + ++ E + I++ V
Sbjct: 155 GSNGFAQAASTVPFHLPA------GFDLPGFLEGARSHYKTLQVAWNENDLSKIQEYVSI 208
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y + ++ R+ + + + V D +++ A+ N ++++ G++
Sbjct: 209 ELYNELSN--QRRELVGE--QHTEVMFLDAELVRATHNANLAEVSVKFSGRYRDTV---- 260
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + +IW RN+ +N W+++ +
Sbjct: 261 -EGVEED------IKEIWHLERNLTQANAPWLIVGIEQ 291
>gi|120600531|ref|YP_965105.1| import inner membrane translocase subunit Tim44 [Shewanella sp.
W3-18-1]
gi|120560624|gb|ABM26551.1| import inner membrane translocase, subunit Tim44 [Shewanella sp.
W3-18-1]
Length = 291
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 88/220 (40%), Gaps = 24/220 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ + F +F +R V+ K G + + +G+ + + + + ++
Sbjct: 94 ILIIGLLAFVLFKIVRTVMASKAGAQPRPAYAGAGQPNPNFQRQ-------QAEQTGFAS 146
Query: 73 SINELFPIGT-RLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ G+ + D+ FD FL AR+ Y+ + ++ E + I++ V
Sbjct: 147 NATNNANSGSHGFAQAASDVPFNLPAGFDLPGFLEGARSHYKTLQLAWNENDLSKIQEYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
++ + ++ R+ + + V D +++ A+ N ++++ G++
Sbjct: 207 SIELFNELSN--QRRELVGD--QHTEVMFLDAELVRATHTANLAEVSVKFSGRYRDTV-- 260
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + ++W RN+ +N W+++ +
Sbjct: 261 ---EGVEED------IKEVWHLERNVAQANSPWLIVGIEQ 291
>gi|119776251|ref|YP_928991.1| hypothetical protein Sama_3119 [Shewanella amazonensis SB2B]
gi|119768751|gb|ABM01322.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 295
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 81/224 (36%), Gaps = 34/224 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I++ A + F +F +R + S + G +D
Sbjct: 100 IVIIALLAFVLFKVIRML-------------MASKAQAQPRPAYSGAGQASTAPGQDLYR 146
Query: 73 SINELFPIGT-RLNKVMRDIVSV-----YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
E G N S FD FL AR Y+ + ++ EG ++ I
Sbjct: 147 QQAEPAAFGGLGGNSGFAQPQSTVPFQLPPGFDLAAFLEGARGHYKTLQQAWNEGDLNKI 206
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
++ V ++ + + R+ E + ++ + D +++ A+ ++++ G++
Sbjct: 207 QEYVSIELFNELSQ---QRRELEGQQHTEVMFL-DAELVRATYNNELAEVSVKFSGRYRD 262
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
A+ + D + ++W RN+ +N W+++ +
Sbjct: 263 AA-----EGVEED------IKEVWHLERNLLQANSPWLIVGIQQ 295
>gi|218680118|ref|ZP_03528015.1| import inner membrane translocase subunit Tim44 [Rhizobium etli
CIAT 894]
Length = 78
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 161 DMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN 220
+I +A + + IT+RI+ Q ISA+YDK ++LI D E +V D+WTF R+ +
Sbjct: 6 KAEITHAETKGSEAQITVRIISQLISATYDKADVLIEGDAENVAEVNDLWTFARDTRSRD 65
Query: 221 PNWVLISTKLGE 232
PNW L++T+
Sbjct: 66 PNWKLVATESEH 77
>gi|78223134|ref|YP_384881.1| import inner membrane translocase subunit Tim44 [Geobacter
metallireducens GS-15]
gi|78194389|gb|ABB32156.1| import inner membrane translocase, subunit Tim44 [Geobacter
metallireducens GS-15]
Length = 322
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 70/180 (38%), Gaps = 3/180 (1%)
Query: 52 SKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY 111
+++ R ++ ++ + P+ + + + + FD F A++ +
Sbjct: 146 AQQTWRQAESVEPPPRQYGFGQTAQAAPVD-ETSFGLAHVRQMDGSFDENRFKETAQDIF 204
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+ ++ + + L+ + F + K+ + + + ++ I A EE
Sbjct: 205 FRVQGAWTRRDLSPVADLLTPEMQVTFRQQIDELKAAGTINRLENISVREVNITEAWQEE 264
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y+T+R++ + + D+ ++S K + WTF R + NP W L + +
Sbjct: 265 GRDYLTVRLLASILDYTTDESGKVVSGSDSAPVKFEEYWTFSRPVG-PNP-WKLSAIQQA 322
>gi|330828529|ref|YP_004391481.1| Import inner membrane translocase subunit Tim44 [Aeromonas veronii
B565]
gi|328803665|gb|AEB48864.1| Import inner membrane translocase, subunit Tim44 [Aeromonas veronii
B565]
Length = 286
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 73/210 (34%), Gaps = 32/210 (15%)
Query: 21 FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPI 80
F+ LR GK +P ++G + + + F
Sbjct: 108 VFLIRTLRK--GK-VATPQPQQAAYAGYQPPQSAAPQQFEQSNSAPQATGFADSDVPF-- 162
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
+ FD FL AR+ Y + +++ + + + + V +++
Sbjct: 163 ------------RLPPGFDMNSFLAGARDHYRTLQEAWNKNDLEKVREYVSPELFEQLK- 209
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ R + + ++ + D +++ A + +++R G+++ D+ +
Sbjct: 210 --AERAELTGDQHTEVMYV-DTQLVRADYGSDWAQVSVRFSGRYM----DRQEQVEE--- 259
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++W R++ +N W ++ +
Sbjct: 260 ----DIKEVWHLERDLAKNNAPWHIVGIEQ 285
>gi|320352867|ref|YP_004194206.1| import inner membrane translocase subunit Tim44 [Desulfobulbus
propionicus DSM 2032]
gi|320121369|gb|ADW16915.1| import inner membrane translocase subunit Tim44 [Desulfobulbus
propionicus DSM 2032]
Length = 313
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 75/225 (33%), Gaps = 12/225 (5%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G +L+ + +F++ + +P + SG +
Sbjct: 99 GILPLLILGGVGYFLYKRFVN---------RPAAPSSSGYQPPPAPNMFQGGGGQFAGNT 149
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ + + +I + FD K FL A + + I + + +
Sbjct: 150 VPPVPPIPPIRATNTMEQGLAEIRATDPGFDDKYFLEVASDVFFKIQAGWMRRDLSSYRH 209
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L+ ++ ++ + + + K + + ++II A + ++T+ + +
Sbjct: 210 LLGQQLAAEYEQHFARMQELGQINKLESIAVRKVEIIAAGSDNGEDFVTVLFTANLLDYT 269
Query: 189 YD-KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D K L+ K + WT+ R + + W L ++ E
Sbjct: 270 VDEKTGALVEGSMTEPIKFAEKWTWARPMRTED--WKLEGIEVVE 312
>gi|51246964|ref|YP_066848.1| hypothetical protein DP3112 [Desulfotalea psychrophila LSv54]
gi|50878001|emb|CAG37841.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
Length = 274
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 83/217 (38%), Gaps = 13/217 (5%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ A +F+F + ++ G Y + G+ D
Sbjct: 69 ILILAGGAYFLFRK----------FKQQSKGGKESAYTRPTATPSFGGGMNGGENTDVRP 118
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
F + L++ + I + DF+ + F+ A + + I + + + LV +
Sbjct: 119 PPAPAFAGMSDLDEGIDQIKATDQDFEKEHFIQVASDVFFQIQAGWMRRDISSYRHLVGN 178
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY-DK 191
++ +++ + K+ + K + + +++I A + ++T+R + + + DK
Sbjct: 179 QLAEEYTSQFAKMKAAGRTNKLESIAVRSIEVIAAGSDGLEDFVTVRFIASLLDYTVDDK 238
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++ K + WT+ R++ + NW L
Sbjct: 239 TGDIVEGSNTAPVKFEEEWTWARSVKTN--NWKLEGI 273
>gi|253699913|ref|YP_003021102.1| import inner membrane translocase subunit Tim44 [Geobacter sp. M21]
gi|251774763|gb|ACT17344.1| import inner membrane translocase subunit Tim44 [Geobacter sp. M21]
Length = 318
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 25/223 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ILL A I ++ ++ + + G + G + +
Sbjct: 114 IFEILLLAGI-GYLIYRM----------------VKKRRSEAAALQGAGSYSYGGYEPQG 156
Query: 70 NLDSINE--LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
L P + + + + FD F ++ + + I + + A+
Sbjct: 157 AAIPAPYRVLEPSANDVATGLSHLRQMDPGFDEGRFNDQVMDHFFKIQGGWMNRDLAALS 216
Query: 128 KLVDSRVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
LV + F D + R +++ + + ++I E Y+T I +
Sbjct: 217 PLVTEEMKGIFRDDIDRLLRDRQVNRLEN--IAVRKVEIAEVWQEAGQDYVTALIYANLL 274
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D++ +++ K ++WTF R + N W L
Sbjct: 275 DYTTDENGQVVAGSKTEPVKFEELWTFARPVG--NNPWRLSGI 315
>gi|237807609|ref|YP_002892049.1| import inner membrane translocase subunit Tim44 [Tolumonas auensis
DSM 9187]
gi|237499870|gb|ACQ92463.1| import inner membrane translocase subunit Tim44 [Tolumonas auensis
DSM 9187]
Length = 286
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 41/225 (18%)
Query: 10 DFLILLFAFITFFVFLQ-LRGVLGKKTGNEKPFSGFFSGK----YVFSKRDERGIITLGK 64
F ILL A + F+ + LR KP + +K+ +
Sbjct: 96 IFDILLMAGVA-FLAFRFLRN--------RKPATAAGPQPAYGMPYQTKQSTESAFQKPE 146
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+ + P F+ +F+ A Y + ++ +
Sbjct: 147 YAGNTSFSPATDTVPFDLP------------EGFNTAEFIKGACEHYRTLQVAWNDNDFS 194
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
I++ V ++ L ++N + + V D +++ A + N+ I++ G++
Sbjct: 195 KIQEYVTPELFN----ELKQERANYTGAQHTEVLYVDAELVRAERKINSAQISVLFKGRY 250
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ I D + ++W RN+ +N W+++ +
Sbjct: 251 RDSV-----EGIEED------IHEVWHLERNLSSANAPWLIVGIE 284
>gi|149911555|ref|ZP_01900169.1| hypothetical protein PE36_11757 [Moritella sp. PE36]
gi|149805400|gb|EDM65410.1| hypothetical protein PE36_11757 [Moritella sp. PE36]
Length = 277
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 79/217 (36%), Gaps = 30/217 (13%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
++ A + F+ +L S++ + +++ D+
Sbjct: 91 IIMAGVA-FLLFRL--------------FKGMMQAKAASQQGSPQTASGPAFRQEAQPDA 135
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
G ++ DFD FL+ AR+ Y+ + ++ E + I++ V
Sbjct: 136 TFNTASQGGFAGSSNDVPFNLPADFDLTSFLSGARSHYKTLQKAWNENDLETIQEYVSIE 195
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
+Y + RK E + ++ + D++++ A + ++++ G++
Sbjct: 196 LYNELR---VQRKELEGEQHTEVMFL-DVELVRAESTASLSQVSVKFNGRYR-------- 243
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ + ++W R++ ++ W++ +
Sbjct: 244 ---DGHEDVEADINEVWHLERDLTQTDAPWLITGIEQ 277
>gi|117619732|ref|YP_855556.1| import inner membrane translocase, subunit Tim44 [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117561139|gb|ABK38087.1| import inner membrane translocase, subunit Tim44 [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 284
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 63/185 (34%), Gaps = 16/185 (8%)
Query: 46 SGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLN 105
GK ++ N P T + FD FL
Sbjct: 115 KGKMAAPQQQTAYAGYQPPQSAAPQQFEQNHSAPQATGFADS-DVPFRLPPGFDMNGFLA 173
Query: 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165
AR+ Y + +++ + + + + V +++ + R + ++ + D +++
Sbjct: 174 GARDHYRTLQEAWNKNDLEKVREYVSPELFEQLK---AERAELTGEQHTEVMYV-DTQLV 229
Query: 166 NASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
A + +++R G+++ D+ + + ++W RN+ N W +
Sbjct: 230 RADYGSDWAQVSVRFSGRYM----DRQEQVEE-------DIKEVWHLERNLAKDNAPWHI 278
Query: 226 ISTKL 230
+ +
Sbjct: 279 VGIEQ 283
>gi|322420322|ref|YP_004199545.1| import inner membrane translocase subunit Tim44 [Geobacter sp. M18]
gi|320126709|gb|ADW14269.1| import inner membrane translocase subunit Tim44 [Geobacter sp. M18]
Length = 322
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 13/219 (5%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F I+L A I ++ ++ V +++ E P +G G + + ++
Sbjct: 114 LFDIVLLAGI-CYLIYRM--VKKRRS--ETPLQSVSTGYGSQ------GYDSPQQYQENS 162
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
S P + + + + FD F + +++ I + + A+ L
Sbjct: 163 IPASYRVDEPPQADIYTGISHLRQMDPGFDEARFKDLVMDNFFRIQGGWMNRDLQALSAL 222
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + F + + + + + + + ++ E Y+T+ I + +
Sbjct: 223 LTPEMQGVFREDIERLLRDGRVNRLENIAVRSVEFSEVWQEAGQDYVTVLIYANLLDYTT 282
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D+ +++ K + WTF R + N W L
Sbjct: 283 DEQGTVVAGSKTEPVKFEEHWTFTRPVG--NNPWRLSGI 319
>gi|307634800|gb|ADN78334.1| transport protein, Tim44-like domain, putative [Geobacter
sulfurreducens KN400]
Length = 321
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 71/190 (37%), Gaps = 3/190 (1%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK 101
+ + R ++ E P + + + + F +
Sbjct: 135 ASRRREAAATAGRAPDWSREEPVTPQQYRYGQPAESVPAAGA-DSGLAHVRQMDGSFSEE 193
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
F A++ + + ++ + + +++ + + ++ K+ + + + +
Sbjct: 194 QFRQLAQDVFFRVQGAWTRRDLSSAREVLAPEMERALQGDVAELKARGQVNRLENIAVRQ 253
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
++++ A EE + +IT+R + + + D++ ++S K + WTF R + NP
Sbjct: 254 VELVEAWQEEGSDFITVRFLANLLDYTTDEEGRVLSGSDREPVKFEEFWTFTRPVG-PNP 312
Query: 222 NWVLISTKLG 231
W L + +
Sbjct: 313 -WKLSAIQQA 321
>gi|39996193|ref|NP_952144.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39982958|gb|AAR34417.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
Length = 321
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 71/193 (36%), Gaps = 3/193 (1%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDF 98
+ + + R ++ E P + + + + F
Sbjct: 132 RFVASRRREAAATAGRAPDWSREEPVTPQQYRYGQPAESVPAAGA-DSGLAHVRQMDGSF 190
Query: 99 DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVG 158
+ F A++ + + ++ + + +++ + + ++ K+ + + +
Sbjct: 191 SEEQFRQLAQDVFFRVQGAWTRRDLSSAREVLAPEMERALQGDVAELKARGQVNRLENIA 250
Query: 159 IDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP 218
+ ++++ A EE +IT+R + + + D++ ++S K + WTF R +
Sbjct: 251 VRQVELVEAWQEEGCDFITVRFLANLLDYTTDEEGRVLSGSDREPVKFEEFWTFTRPVG- 309
Query: 219 SNPNWVLISTKLG 231
NP W L + +
Sbjct: 310 PNP-WKLSAIQQA 321
>gi|145300179|ref|YP_001143020.1| import inner membrane translocase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852951|gb|ABO91272.1| predicted import inner membrane translocase [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 280
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/188 (11%), Positives = 65/188 (34%), Gaps = 16/188 (8%)
Query: 44 FFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIV-SVYTDFDPKD 102
F + + + + G + D+ + FD
Sbjct: 107 FRAMRKSKAPSPQPQTAYAGYQPPSATPQQFEQSSSASQATGFADSDVPFRLPPGFDMNS 166
Query: 103 FLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDM 162
FL+ AR+ Y + +++ + + + V +++ + R + ++ + D
Sbjct: 167 FLSGARDHYRTLQEAWNTNDLEKVREYVSPELFEQLK---AERAELTGEQHTEVMYV-DT 222
Query: 163 KIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN 222
+++ A + +++R G+++ D+ + + ++W RN+ N
Sbjct: 223 QLVRADYGSDWAQVSVRFSGRYM----DRQEQVEE-------DIKEVWHLERNLAKDNAP 271
Query: 223 WVLISTKL 230
W ++ +
Sbjct: 272 WHIVGIEQ 279
>gi|298498003|ref|ZP_07007810.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|297542336|gb|EFH78386.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 272
Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +R L K G+ + +S + ++ N+
Sbjct: 98 ILIMGLIAFVIFKLMRAFLASKQGS----INQSQQQPAYSGMNRTPF-------EQPNVH 146
Query: 73 SINELFPIGTRLNKVMR-DIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + +G + D+ Y FD F+N AR Y + ++ ++ I + V
Sbjct: 147 NFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYV 206
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+++D L ++N + + + V D +I+ A + N ++++ G++++ S
Sbjct: 207 SPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQFSGRYVTLSK 261
>gi|114332328|ref|YP_748550.1| import inner membrane translocase, subunit Tim44 [Nitrosomonas
eutropha C91]
gi|114309342|gb|ABI60585.1| import inner membrane translocase, subunit Tim44 [Nitrosomonas
eutropha C91]
Length = 304
Score = 98.8 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 75/223 (33%), Gaps = 20/223 (8%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
IL+ A I +F +R + +++ G + +S + ++
Sbjct: 97 NMMDILVLAGIAAAIFFGIRMM--RRSS----GGGQAARPMQYSGAGAGHSMGGMPFPRQ 150
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
D + + D + + FD FL A+ S+ + + G + I
Sbjct: 151 DTATPSGGVASGVGGQSAANTDALDIPAGFDVDSFLKNAKGSFITLQLAHDSGDLEEIRA 210
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
++ + + ++ R + + V + +++ + ++N ++R G+
Sbjct: 211 FTTPELFAEISKQITER---GNVTQQTDVTHVNAALLDITTQDNHAVASVRFTGELR--- 264
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ +IW +++ S+ W+L +
Sbjct: 265 --------EAPGAQLEPFDEIWHVEKDLVASDSAWLLSGIQQA 299
>gi|270005995|gb|EFA02443.1| hypothetical protein TcasGA2_TC008130 [Tribolium castaneum]
Length = 421
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + I T L++ + +I + FD K FL + +
Sbjct: 236 ESDNPVIRASRLLTDKVSDIMGGLFQKTELSETLTEICKIDPTFDTKKFLKQCETDIIPN 295
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G + ++ + F + + S ++ +D++ ++ + E
Sbjct: 296 ILEAMTRGDLEVLKDWCHEGPFNLFAIPIKEAYKKGYKIDSKVLDVDNVDLVMGKVMEQG 355
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ I Q + D + ++ DPE +V +W R+I +P W L
Sbjct: 356 PVLIISFTSQQMMCVRDPNGNVVEGDPEKVMRVAYVWVLCRDISEPDPRAAWRL 409
>gi|197119310|ref|YP_002139737.1| transport protein [Geobacter bemidjiensis Bem]
gi|197088670|gb|ACH39941.1| transport protein, Tim44-like domain, putative [Geobacter
bemidjiensis Bem]
Length = 318
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 26/223 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ILL A I ++ ++ + + G + G +++
Sbjct: 115 IFEILLLAGI-GYLIYRM-----------------VKKRRSEAALQGAGSYSYGGYEQQG 156
Query: 70 NLDSINE--LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
S + P + + + + FD F + +++ I + + +
Sbjct: 157 ATISAPYRVIEPSYNDVATGLSHLRQMDPGFDEGRFNDLVMDNFFKIQGGWMNRDLAVLA 216
Query: 128 KLVDSRVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
LV + F D + R +++ + + +++I E Y+T RI +
Sbjct: 217 PLVTEEMKGIFRDDIDRLLRDRQVNRLEN--IAVRNVEITEVWQEAGQDYVTARIYANLL 274
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D++ +I+ K ++WTF R + N W L
Sbjct: 275 DYTTDENGQVITGSKTEPVKFEELWTFARPVG--NNPWRLSGI 315
>gi|189236504|ref|XP_975336.2| PREDICTED: similar to mitochondrial import inner membrane
translocase subunit tim44 [Tribolium castaneum]
Length = 424
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + I T L++ + +I + FD K FL + +
Sbjct: 239 ESDNPVIRASRLLTDKVSDIMGGLFQKTELSETLTEICKIDPTFDTKKFLKQCETDIIPN 298
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G + ++ + F + + S ++ +D++ ++ + E
Sbjct: 299 ILEAMTRGDLEVLKDWCHEGPFNLFAIPIKEAYKKGYKIDSKVLDVDNVDLVMGKVMEQG 358
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ I Q + D + ++ DPE +V +W R+I +P W L
Sbjct: 359 PVLIISFTSQQMMCVRDPNGNVVEGDPEKVMRVAYVWVLCRDISEPDPRAAWRL 412
>gi|255641370|gb|ACU20962.1| unknown [Glycine max]
Length = 181
Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 9/154 (5%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+L T + F NEA N Y+ I +G + K V ++ + +
Sbjct: 17 QLKSAYAIAKLRKTGYSKNQFYNEAANMYKEINTLIAKGDKRTLRKAVTENMFSALKNEI 76
Query: 143 STRKSNEKNVKSSLVG-IDDMKIINA--------SIEENTVYITIRIVGQFISASYDKDN 193
R++ V +V + ++ + A + + + +T+ I+ + +YD
Sbjct: 77 KQRETAWSRVYWEMVEPVVKIRTLRARLIGVDRKDLNKTFIQLTLEILAKQKFEAYDSKG 136
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+++ D V DIW F +++ + W L
Sbjct: 137 SVVAGDKSKEVLVRDIWVFEKSMFHAGATWRLCG 170
>gi|328952110|ref|YP_004369444.1| import inner membrane translocase subunit Tim44 [Desulfobacca
acetoxidans DSM 11109]
gi|328452434|gb|AEB08263.1| import inner membrane translocase subunit Tim44 [Desulfobacca
acetoxidans DSM 11109]
Length = 333
Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 77/225 (34%), Gaps = 24/225 (10%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G F IL+ I L LG + N + SG + +
Sbjct: 130 GLFEILIIGGI-------LY--LGYRLLNRRRQQAHQSGGGGGKTYGATLLYPEPAAPQL 180
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
D EL P I + F+ F ++ + + ++ +V ++
Sbjct: 181 PAFDLQTELEP-----------IRRMDPSFNEATFKEMVQDVFFKLQGAWMRQEVSSMRD 229
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
L Y + L K+ + K + + ++I A E+ +IT+ + + +
Sbjct: 230 LTTPEFYDILDKELQELKAKGQINKLENIAVRQVEISEAWQEQGQDFITVGFLANLLDYT 289
Query: 189 YDK-DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS-TKLG 231
D N +++ K + WTFVR I W L + T+ G
Sbjct: 290 VDAGTNQVLAGSDTEPVKFEEYWTFVRPIGNG--PWKLTAITQPG 332
>gi|85860629|ref|YP_462831.1| transporter [Syntrophus aciditrophicus SB]
gi|85723720|gb|ABC78663.1| transporter [Syntrophus aciditrophicus SB]
Length = 338
Score = 96.1 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 4/160 (2%)
Query: 71 LDSINELFPI-GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
I ++ P G + I + FD + F + + + I ++ + + L
Sbjct: 177 APPIQDIPPASGYEGGGGLDAIRQMDYQFDERRFKDSVLDHFFQIQGAWAGRDMSGVRNL 236
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ V + T ++ ++ K + + + I A E +IT++ + +
Sbjct: 237 LTDEVCKTIQQDAETLRAKKRINKLDNIAVRSVDITEAWQEGGQDFITVKFYANLLDYTI 296
Query: 190 DKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D+ ++S K ++ WTF R N W L +
Sbjct: 297 DEASGEVVSGSRTEPVKFVEFWTFTRPTG--NNPWRLSAV 334
>gi|30250392|ref|NP_842462.1| hypothetical protein NE2471 [Nitrosomonas europaea ATCC 19718]
gi|30181187|emb|CAD86383.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 304
Score = 95.7 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 32/229 (13%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
IL+ I +F +R + G G + ++R + G
Sbjct: 99 NMMDILVLVGIAAAIFFIIRMMRGSAGGRQ-------------TQRPMQYSGAGAGGMGG 145
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYT-----DFDPKDFLNEARNSYEAIVDSFFEGKV 123
+ + P G + R S DFD + FL +A+ S+ A+ + G +
Sbjct: 146 VPFPNRDTSAPAGGASSGYDRQSTSTDAPDIPADFDVESFLKQAKRSFIALQLAHDAGDL 205
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
I ++ + + ++ R + + V D +++ + + N ++R G+
Sbjct: 206 EEIRAYTTPDLFAEISKQVAERGNMAQQTDVIFV---DAALLDVTNQGNHAIASVRFTGE 262
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + +IW +++ S+ W+L + +
Sbjct: 263 LRD-TPNAQPEPFD----------EIWHVEKDLAASDSGWLLAGIQQAD 300
>gi|332534647|ref|ZP_08410479.1| hypothetical protein PH505_bn00240 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035927|gb|EGI72408.1| hypothetical protein PH505_bn00240 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 284
Score = 94.6 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 78/221 (35%), Gaps = 34/221 (15%)
Query: 11 FLIL--LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F +L + F+ +L V TG + S + ++
Sbjct: 90 FQLLEMILLAGGLFILFKL--V----TGFLRANRAPQLASPSTSAQQNAFK---QAPIEQ 140
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
P G + + +FD FL AR+ Y + ++ + +
Sbjct: 141 PTSTGFASSAPQGESVPFNLP------PNFDVNGFLQGARSHYHTLQTAWNNADYTTMAE 194
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
+ + +F + R++ ++V++ ++ I D +++ A + +++R G++
Sbjct: 195 YLSPTLVAEFK---AEREAI-QSVETEVMFI-DAELVRADTNAQSWQVSVRFKGKYRDL- 248
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
D + +++IW R + + W+++ +
Sbjct: 249 ---------GD-KKEEPILEIWHLERLM-SDDAPWLIVGVE 278
>gi|53804400|ref|YP_113719.1| hypothetical protein MCA1256 [Methylococcus capsulatus str. Bath]
gi|53758161|gb|AAU92452.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 204
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 33/230 (14%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F ++ D +LLFA I FF L +L + G++ + ++
Sbjct: 7 FEHLNVLD--LLLFAGIGFF----LYRLLAAR-GSQPQPAAGAGYYPHSENPGGANPVSG 59
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
D L P ++ DFD FLN A+ +Y + ++ E
Sbjct: 60 RPAFDTDLLSRRGGAQPAQSQPA-----------DFDTTGFLNGAKAAYRQLQAAWDERD 108
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ + L +V+ + D L +++ + + L+ + D +I+ + + +
Sbjct: 109 LGTLRALTTDKVFAELQDQL---RASAERHSTELLRV-DAEILEVRDRGDEREVAVLFDV 164
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ E V ++W FVR+ P W L + E
Sbjct: 165 TLR-----------EAPAEEAAVVHEVWHFVRSRSSRQPTWFLDGIQQVE 203
>gi|307109340|gb|EFN57578.1| hypothetical protein CHLNCDRAFT_51139 [Chlorella variabilis]
Length = 395
Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 57/155 (36%), Gaps = 15/155 (9%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK- 146
+ F+ F E+ Y I +G+ ++ +LV V+ D L R+
Sbjct: 150 LAKCKKYVPGFNRNAFKQESLELYRDICRLLAQGERGSLRQLVTPAVFSDMKRQLKQRED 209
Query: 147 -SNEKNVKSSLVG----IDDMKIINASI--------EENTVYITIRIVGQFISASYDKDN 193
+ + + G +D++ ++ + +T+RI A+YDK
Sbjct: 210 PAAGRACSGTSSGWEPTVDELTTVHGRLIMINPKDETSGFAQLTVRIPSAQRFAAYDKAG 269
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPN-WVLIS 227
L++ DPE V D W F S N W L
Sbjct: 270 KLVAGDPEQSIDVEDYWVFEHAFKASPANRWRLAG 304
>gi|332374284|gb|AEE62283.1| unknown [Dendroctonus ponderosae]
Length = 422
Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + FD K FL + + I+++ G + ++ Y F+
Sbjct: 264 TELSETLTEICKIDNSFDTKRFLKQCETDIIPNILEAMTRGDLEVLKDWCHEGPYNLFSI 323
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ ++S ++ ID++ ++ + + + I Q + D + ++ D
Sbjct: 324 PIQEAYKKGFKIESKILDIDNVDLVMGKVMDQGPVLIISFTSQQMMVFKDVEGNVVDGDL 383
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ +V +W R+I ++P W L
Sbjct: 384 DKIMRVTHVWVLCRDITETDPRAAWRL 410
>gi|157825721|ref|YP_001493441.1| hypothetical protein A1C_03235 [Rickettsia akari str. Hartford]
gi|157799679|gb|ABV74933.1| hypothetical protein A1C_03235 [Rickettsia akari str. Hartford]
Length = 211
Score = 92.2 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I F++ +L LG + E+ + G+ V + + +
Sbjct: 1 MSPQIIELLIFAVIAFYIINKLITTLGSTSEEEQTRQKSYFGEPVIKDVTYSTVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTAQDIKAFKDIIVEHNITAVVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R + F + S SS + K + N ++I +
Sbjct: 121 KDSKELSELIDKRYLEAFEKIIP---SYGDVFDSSAL---SAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|195108009|ref|XP_001998585.1| GI24055 [Drosophila mojavensis]
gi|193915179|gb|EDW14046.1| GI24055 [Drosophila mojavensis]
Length = 452
Score = 91.9 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 69/178 (38%), Gaps = 7/178 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + D + + T L++ M ++V + +FD K FL++ + I
Sbjct: 267 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPNFDQKQFLHDCEK--DII 324
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + ++ Y ++ K + S ++ I+++++ + E
Sbjct: 325 PNVLEAIVRGDLEILKDWCFESTYNIIATPITQAKKAGLYLDSKILDIENIELAMGKVME 384
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ ++ DPE +V +W R+ NP W L+
Sbjct: 385 QGPVLIITFQAQQIMCVRDQKGQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 442
>gi|253701845|ref|YP_003023034.1| import inner membrane translocase subunit Tim44 [Geobacter sp. M21]
gi|251776695|gb|ACT19276.1| import inner membrane translocase subunit Tim44 [Geobacter sp. M21]
Length = 321
Score = 91.9 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 22/219 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
ILL A I ++ ++ V K+ +P + + + +I + + +
Sbjct: 119 ILLLAGI-GYLIYRM--VKKKR----EPEADLYGQRP--------NVIDIDRYQAGQGTA 163
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
P + + + I + FD F + + + I ++ + + L+
Sbjct: 164 RPLGNQPAQDEVEEGLSHIRQMDPSFDEARFNDTVMDMFFKIQGAWMNRDLSGVSALLTD 223
Query: 133 RVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY- 189
+ + R+ +++ + + +++I A E +IT + + +
Sbjct: 224 EMRAAMQGDVDQLLREKRVNRLEN--IAVRNVEISEAWQESGKDFITALVYANLLDYTTD 281
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D ++S K + WTF R + N W L +
Sbjct: 282 DATGAVVSGSKTDPVKFEEYWTFTRTVG--NNPWKLSAI 318
>gi|218459911|ref|ZP_03500002.1| putative translocase transmembrane protein [Rhizobium etli Kim 5]
Length = 59
Score = 91.9 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
IT+RIV Q ISA+YDK + LI D E +V D+WTF R+ +PNW L++T+
Sbjct: 1 QITVRIVSQLISATYDKADALIEGDAENVAEVNDLWTFARDTRSRDPNWKLVATESEH 58
>gi|148907785|gb|ABR17018.1| unknown [Picea sitchensis]
Length = 190
Score = 91.9 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL- 156
+ F EA Y+ I +G ++ +LV +Y F + R++ V +
Sbjct: 50 YSKPKFYEEAIQLYKEINSHLAQGDRTSLRQLVTENMYTIFKREIKQRETTWSRVHWEMI 109
Query: 157 ---VGIDDMK-----IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVID 208
V I ++ + +++ V IT+ I+ A+YD +LI+ D ++ V D
Sbjct: 110 EPTVRIRTLRARMIAVDKNNLDNAFVQITLEILTNQKFAAYDLKGILITEDSKVL--VED 167
Query: 209 IWTFVRNIPPSNPNWVLIS 227
IW F R++ W L
Sbjct: 168 IWVFERSLFQPGARWRLCG 186
>gi|297808779|ref|XP_002872273.1| protein translocase [Arabidopsis lyrata subsp. lyrata]
gi|297318110|gb|EFH48532.1| protein translocase [Arabidopsis lyrata subsp. lyrata]
Length = 314
Score = 91.5 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 19/159 (11%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
L T + F EA Y+ I G I K V R+Y + +
Sbjct: 157 ELRSAYAIAKLRKTGYSKNTFYIEALELYKQINILMANGDKKTIRKNVTERMYSALKNEI 216
Query: 143 STRKS--------------NEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
R++ + +++ L+GID + A + +T+ + + +
Sbjct: 217 KQREAMWDGVYWEMIEPVVKIRTLQARLIGIDRTDLKKA-----FIQLTLEFLTKQKFEA 271
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
YD +++ D V DIW F +++ + W L
Sbjct: 272 YDAKGNVVAGDRNKEVLVRDIWVFEKSLFHTGAYWRLCG 310
>gi|77359903|ref|YP_339478.1| hypothetical protein PSHAa0957 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874814|emb|CAI86035.1| conserved protein of unknown function; putative membrane protein
[Pseudoalteromonas haloplanktis TAC125]
Length = 283
Score = 91.5 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 79/221 (35%), Gaps = 34/221 (15%)
Query: 11 FLIL--LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F +L + F+ L+L V G + S + ++ K+
Sbjct: 90 FQLLEMILLAGAAFIILKL--VRG-------------FMRARQSPQLASAGMSQNAFKQA 134
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ FD FL AR Y + +++ E H + +
Sbjct: 135 PIEHEQTTSTGFANSTAHGDDVPFNLPPGFDTNGFLQGAREHYHTLQNAWNEADYHTMAE 194
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
+ + +F + R++ +V + ++ I D +++ A + +++R G++ +
Sbjct: 195 YLSPELVAEFK---AEREAI-TSVATEVMFI-DAELVRADTLTDKWQVSVRFKGKYRDLA 249
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
DK I ++IW R + ++ W+++ +
Sbjct: 250 -DKQEQPI----------LEIWHLER-LTLTDAPWLIVGVE 278
>gi|157133678|ref|XP_001662961.1| mitochondrial import inner membrane translocase subunit tim44
[Aedes aegypti]
gi|108870735|gb|EAT34960.1| mitochondrial import inner membrane translocase subunit tim44
[Aedes aegypti]
Length = 433
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 65/179 (36%), Gaps = 3/179 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ + +I + +FD K FL + +
Sbjct: 248 ESENPVIRASRLLTDKVSDVMGNLFSKTELSETLTEICKIDPNFDQKQFLRDCENDIIPN 307
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G + ++ Y +S + + S ++ I+++ + + E
Sbjct: 308 ILEAMIRGDLEVLKDWCFESTYNIIATPISQAQKLGYYLDSKVLDIENVDLAMGKVMEQG 367
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKL 230
+ I Q I D ++ DPE + +W R+ NP W L+ +
Sbjct: 368 PVLIITFQTQQIMCVRDSKGNVVEGDPEKVMRCNYVWVLCRDPNDLNPKSAWRLMELQA 426
>gi|157118792|ref|XP_001653263.1| mitochondrial import inner membrane translocase subunit tim44
[Aedes aegypti]
gi|108875602|gb|EAT39827.1| mitochondrial import inner membrane translocase subunit tim44
[Aedes aegypti]
Length = 433
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 3/179 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ + +I + +FD K FL + +
Sbjct: 248 ESENPVIRASRLLTDKVSDVMGNLFSKTELSETLTEICKIDPNFDQKQFLRDCENDIIPN 307
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G + ++ Y +S + + S ++ I+++ + + E
Sbjct: 308 ILEAMIRGDLEVLKDWCFESTYNIIATPISQAQKLGYYLDSKVLDIENVDLAMGKVMEQG 367
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKL 230
+ I Q I D +I DPE + +W R+ NP W L+ +
Sbjct: 368 PVLIITFQTQQIMCVRDSKGNVIEGDPEKVMRCNYVWVLCRDPNDLNPKSAWRLMELQA 426
>gi|116749223|ref|YP_845910.1| import inner membrane translocase subunit Tim44 [Syntrophobacter
fumaroxidans MPOB]
gi|116698287|gb|ABK17475.1| import inner membrane translocase, subunit Tim44 [Syntrophobacter
fumaroxidans MPOB]
Length = 341
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 3/155 (1%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
E P + + +++ F+ + F ++ + I + + IE L+ +
Sbjct: 178 PEYLPPADDVERGFQELRRFDPGFNEESFKETVQDLFFRIQAGWMNRSLDGIEGLLAPEM 237
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY-DKDN 193
F + + + K + + ++ EE Y+T+ + + DK
Sbjct: 238 KAFFASEFDRLRRSGRINKLENIAVRKVEPSEVWQEEGKDYVTVLFTANLLDYTVDDKTG 297
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++ D K + WTF R+I W L +
Sbjct: 298 QVVEGDKLNPVKFQEFWTFCRDIGTQ--RWQLTAI 330
>gi|148265319|ref|YP_001232025.1| import inner membrane translocase, subunit Tim44 [Geobacter
uraniireducens Rf4]
gi|146398819|gb|ABQ27452.1| import inner membrane translocase, subunit Tim44 [Geobacter
uraniireducens Rf4]
Length = 318
Score = 90.7 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 25/222 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ILL A I ++ + F K V S G
Sbjct: 116 LFEILLLAGI-GYLIYR-----------------FVKKKRVDSSYSTYEQGGYQHGNVTP 157
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
P T ++ M I + FD F + + + I ++ + ++ L
Sbjct: 158 IYGGTESYEPQPTDVDTGMAHIRQMDPSFDESRFNDSVMDIFFKIQGAWMNRDLSSVSGL 217
Query: 130 VDSRVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ + + F + + R +++ + + +++I E YIT I +
Sbjct: 218 LTDEMKRIFQEDMDRLLRDKQVNRLEN--IAVRNVEISEVWQESGQDYITALIYANLLDY 275
Query: 188 SY-DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D ++S K + WTF R + N W L +
Sbjct: 276 TTDDATGTVVSGSKTEPVKFEEYWTFTRPVG--NNPWRLSAI 315
>gi|198450930|ref|XP_001358182.2| GA11194 [Drosophila pseudoobscura pseudoobscura]
gi|198131257|gb|EAL27319.2| GA11194 [Drosophila pseudoobscura pseudoobscura]
Length = 458
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T L++ M ++V + FD K FL + + I +++ G + ++ Y
Sbjct: 300 TELSETMTELVKIDPAFDQKQFLRDCET--DIIPNVLEAIVRGDLEILKDWCFESTYNVI 357
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
++ K + + S ++ I+D+ + + + + I Q I D ++
Sbjct: 358 ATPITQAKKSGLYLDSKILDIEDIDLAMGKVMDQGPVLIITFQAQQIMCVRDPKGKVVEG 417
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKL 230
DPE +V +W R+ NP W L+
Sbjct: 418 DPEKVMRVAYVWVLCRDREELNPKAAWRLLEISA 451
>gi|119115002|ref|XP_310830.3| AGAP000291-PA [Anopheles gambiae str. PEST]
gi|116130625|gb|EAA06726.3| AGAP000291-PA [Anopheles gambiae str. PEST]
Length = 401
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 64/178 (35%), Gaps = 7/178 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + D + I T L++ + +I + FD K FL + N + I
Sbjct: 216 ESENPMIRASRLLTDKVSDIMGNLFSKTELSETLTEICKIDPSFDQKQFLRDCEN--DII 273
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G++ + Y ++ + + S ++ I+++ + + E
Sbjct: 274 PNVLEAIVRGELEVLRDWCFESTYNIIATPIAQAQKAGCRLDSKILDIENVDLAMGKVME 333
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ + Q I D +I DPE + +W R+ +P W L+
Sbjct: 334 QGPVLIVTFQTQQIMCVRDGKGAVIEGDPEKVMRCHHVWVLCRDPNELDPKAAWRLME 391
>gi|118579223|ref|YP_900473.1| import inner membrane translocase, subunit Tim44 [Pelobacter
propionicus DSM 2379]
gi|118501933|gb|ABK98415.1| import inner membrane translocase, subunit Tim44 [Pelobacter
propionicus DSM 2379]
Length = 314
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 24/217 (11%)
Query: 15 LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI 74
L A I ++ + K + + + G
Sbjct: 116 LLAGIA-YLIYR----------FVKKKQPELAPGGYNQAGYQATSVPPPYGAAYQESQH- 163
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
G + + I + FD F + A +++ I ++ + + L+ +
Sbjct: 164 -----DGQGADGGLDHIRQMDPGFDENRFNDMAMDTFFKIQGAWMNRDLAPVSTLLTDEM 218
Query: 135 YQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY-DK 191
+ F + L R+ +++ + + + I A E YIT I + + D
Sbjct: 219 RRVFQEDLDGLLRERRTNRLEN--IAVRKVDISEAWQESGQDYITTLIYANLLDYTTDDA 276
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+++S K + WTF R I + W L +
Sbjct: 277 SGIVVSGSKTDPVKFEEYWTFTRPIGGT--PWRLSAI 311
>gi|225451048|ref|XP_002284948.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 299
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 9/140 (6%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
+ + F EA + Y+ I ++ K V +Y + + R+S V +
Sbjct: 156 GYSRQKFYTEAVDLYKEINSQIANSAKASLRKSVTENMYSALKNEIKQRESKWHKVYWEM 215
Query: 157 VG-IDDMKIINASI------EENTV--YITIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
V + ++ + A + + N +T+ + + +YD +++ D + V
Sbjct: 216 VEPVVKIRTLRARMISIDRNDMNKAFIQLTLEFLTKQKFEAYDSKGCVVAGDKDKEVLVR 275
Query: 208 DIWTFVRNIPPSNPNWVLIS 227
D+W F R++ W L
Sbjct: 276 DVWVFERSLFHPGAYWRLCG 295
>gi|195143739|ref|XP_002012855.1| GL23705 [Drosophila persimilis]
gi|194101798|gb|EDW23841.1| GL23705 [Drosophila persimilis]
Length = 458
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T L++ M ++V + FD K FL + + I +++ G + ++ Y
Sbjct: 300 TELSETMTELVKIDPAFDQKQFLRDCET--DIIPNVLEAIVRGDLEILKDWCFESTYNII 357
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
++ K + + S ++ I+D+ + + + + I Q I D ++
Sbjct: 358 ATPITQAKKSGLYLDSKILDIEDIDLAMGKVMDQGPVLIITFQAQQIMCVRDPKGKVVEG 417
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKL 230
DPE +V +W R+ NP W L+
Sbjct: 418 DPEKVMRVAYVWVLCRDREELNPKAAWRLLEISA 451
>gi|170068221|ref|XP_001868783.1| mitochondrial import inner membrane translocase subunit tim44
[Culex quinquefasciatus]
gi|167864292|gb|EDS27675.1| mitochondrial import inner membrane translocase subunit tim44
[Culex quinquefasciatus]
Length = 431
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 60/152 (39%), Gaps = 3/152 (1%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + FD K FL + + I+++ G + ++ Y
Sbjct: 273 TELSETLTEICKIDPSFDQKQFLRDCENDIIPNILEAMIRGDLEILKDWCFESTYNIIAT 332
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ + + S ++ I+++ + + E + + Q I D N ++ DP
Sbjct: 333 PIAQAQKAGFFLDSKILDIENVDLAMGKVMEQGPVLIVTFQTQQIMCVRDSKNAVVEGDP 392
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLISTKL 230
E + +W R+ NP W L+ +
Sbjct: 393 EKVMRCNYVWVLCRDPNDLNPRSAWRLMELQA 424
>gi|325981336|ref|YP_004293738.1| import inner membrane translocase subunit Tim44 [Nitrosomonas sp.
AL212]
gi|325530855|gb|ADZ25576.1| import inner membrane translocase subunit Tim44 [Nitrosomonas sp.
AL212]
Length = 285
Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 31/229 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F ++ D + +L F +++ L +K E+ S +SG ++ +
Sbjct: 87 FENINMMDIVTMLLLIGAVFFIIRM---L-RKPKVEQSPSMQYSGMNTNTRENFNTPAFT 142
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
P DF + FL A+ S+ + + G
Sbjct: 143 PSAGTTVADSQAAHRQPNIPA-------------DFKVEPFLRHAKASFMRLQAAHDHGD 189
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
++ I + + + ++ R ++ + + D ++ + ++R G
Sbjct: 190 INEIRDYTTPEMLAEISAQINERGDAQQTTEIMFI---DANLLEVETAGDLAIASVRFTG 246
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Q L S+PE +IW +++ + W+L +
Sbjct: 247 QL--------KDLPDSEPEA---FDEIWHVQKDLKDPDATWLLAGIQQA 284
>gi|239947276|ref|ZP_04699029.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921552|gb|EER21576.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 211
Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 85/229 (37%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I FF+ +L LG + E+ + G+ V + + +
Sbjct: 1 MSPQIIELLIFAVIAFFIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSTVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTAQDIKAFKDIIVEHNITAVVDGMEQVHNRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R ++F S SS + K + N ++I +
Sbjct: 121 KDTQELSELIDKRYLEEFEKITP---SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANAKEVDWFLSNIE 209
>gi|157803805|ref|YP_001492354.1| hypothetical protein A1E_03170 [Rickettsia canadensis str. McKiel]
gi|157785068|gb|ABV73569.1| hypothetical protein A1E_03170 [Rickettsia canadensis str. McKiel]
Length = 211
Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 84/229 (36%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I FF+ +L LG E+ + G+ V + +
Sbjct: 1 MSPQIIELLIFALIAFFIINKLITTLGSTAEEEQTKQKSYFGEPVIKDVTYSAVKSNKAE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K ++ I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNLPTVEDIKAFQDIIVEQNITAVVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +LVD R ++F S SS + K + N ++I +
Sbjct: 121 KDTQELSELVDKRYLEEFEKITP---SYGDFFDSSAL---SAKYSEIYLFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|298205045|emb|CBI34352.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 89.2 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 9/140 (6%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
+ + F EA + Y+ I ++ K V +Y + + R+S V +
Sbjct: 53 GYSRQKFYTEAVDLYKEINSQIANSAKASLRKSVTENMYSALKNEIKQRESKWHKVYWEM 112
Query: 157 VG-IDDMKIINASI------EENTV--YITIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
V + ++ + A + + N +T+ + + +YD +++ D + V
Sbjct: 113 VEPVVKIRTLRARMISIDRNDMNKAFIQLTLEFLTKQKFEAYDSKGCVVAGDKDKEVLVR 172
Query: 208 DIWTFVRNIPPSNPNWVLIS 227
D+W F R++ W L
Sbjct: 173 DVWVFERSLFHPGAYWRLCG 192
>gi|324512642|gb|ADY45230.1| Import inner membrane translocase subunit tim-44 [Ascaris suum]
Length = 465
Score = 89.2 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 67/171 (39%), Gaps = 8/171 (4%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVH 124
+ D I +F + +++V+ +I + FD ++L E I +++F G +
Sbjct: 292 RGVTDRITSVFTTKSEVSEVLTEIAKIDPSFDKVEWLRFCER--EVIPNVLEAFIRGDLK 349
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
++ R Y + K S ++ I +++++ + + + I
Sbjct: 350 ILQDWCHERAYNALAAVVKEYKKVNFSTADSRVIDISKVEMVSGKMMDQGPVLIITFQAF 409
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLGE 232
I+ + + ++ D +V +W R++ NP W L+ + E
Sbjct: 410 MINVVKNLEGKVVQGDENNPVRVHHVWVMCRDMEEYNPAVAWKLLEVHMQE 460
>gi|88858066|ref|ZP_01132708.1| hypothetical protein PTD2_11789 [Pseudoalteromonas tunicata D2]
gi|88819683|gb|EAR29496.1| hypothetical protein PTD2_11789 [Pseudoalteromonas tunicata D2]
Length = 283
Score = 88.8 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 37/217 (17%)
Query: 14 LLFAFITFFVFLQLRGVLGK-KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
LL A + F +F ++ V+ K + P G + + G + D
Sbjct: 99 LLMALLAFVIFKVVKMVMAKNRQSQPMPAGGPSINPVEQTPQYRENTT----GGFATSQD 154
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ P G FD FL AR+ Y + ++ + IE+ V
Sbjct: 155 HVPFNLPSG----------------FDTTAFLQGARDHYHTLQKAWNNNDLTTIEEYVSP 198
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
++ + + R ++ V D ++ A +++R G++ D
Sbjct: 199 ALFNELK---AERADVADV--ATEVLFLDAELARADSSPILWEVSVRFKGKYRD-LGDTQ 252
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+I ++W R++ SN W+++ +
Sbjct: 253 EEMI----------NEVWHLERDMRQSNAPWLIVGIE 279
>gi|156541363|ref|XP_001599273.1| PREDICTED: similar to mitochondrial import inner membrane
translocase subunit tim44, partial [Nasonia vitripennis]
Length = 400
Score = 88.8 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 7/180 (3%)
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
+ + D + I T L++ + +I + FD FL + +
Sbjct: 214 EESENPVVRASRLLTDKVSDIFGGLFQKTELSETLTEICKLDPSFDKIKFLKDCET--DI 271
Query: 114 I---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE 170
I +++ G + ++ Y L + S ++ ID++ ++ +
Sbjct: 272 IPNVLEAMIRGDLEILKDWCHEAPYNVIAQPLQQAFKLGYRLDSKVLDIDNVDLLMGKVM 331
Query: 171 ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIST 228
+ + I Q I D ++ DPE +V +W R+ NP W L+
Sbjct: 332 DQGPVLAISFTSQQIMCVRDAKGNVVEGDPEKVMRVNYVWVLCRDPAELNPKSAWRLLEI 391
>gi|63093891|dbj|BAD98172.1| hypothetical protein [Drosophila parabipectinata]
Length = 460
Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD K+FL++ + I+++ G + ++ Y
Sbjct: 302 TELSETMTELVKIDPSFDQKEFLHDCETDIIPNILEAIVRGDLEILKDWCFESTYNIIAT 361
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ K + S ++ I+++++ + E + I Q I D+ ++ DP
Sbjct: 362 PITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVEGDP 421
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
E +V +W R+ NP W L+
Sbjct: 422 EKVMRVHYVWVLCRDRNELNPKAAWRLME 450
>gi|186526131|ref|NP_001119286.1| P-P-bond-hydrolysis-driven protein transmembrane transporter
[Arabidopsis thaliana]
gi|332006297|gb|AED93680.1| Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein [Arabidopsis thaliana]
Length = 296
Score = 88.4 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 19/159 (11%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
L T + F EA Y+ I G+ I K V R+Y + +
Sbjct: 139 ELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEI 198
Query: 143 STRKS--------------NEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
R++ + +++ L+GID + A + +T+ + + +
Sbjct: 199 KQREAMWDGVYWEMVEPVVKIRTLQARLIGIDRTDLKKA-----FIQLTLEFLTKQKFEA 253
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
YD + + D V DIW F +++ + W L
Sbjct: 254 YDAKGNVAAGDKNKEVLVRDIWVFEKSLFHTGAYWRLCG 292
>gi|326678158|ref|XP_003201001.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Danio rerio]
gi|94734038|emb|CAK04039.1| novel protein containing a Tim44-like domain (zgc:110764) [Danio
rerio]
Length = 452
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 67/174 (38%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA-RNSYEA 113
+ D + I T +++V+ +I+ V FD FL + ++
Sbjct: 267 ESDNAFIRASRAVTDKMTDIIGGLFSKTEMSEVLTEILKVDPSFDKDSFLKQCEKDIIPN 326
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ +G++ ++ Y + K+ S ++ ID++ + + E
Sbjct: 327 ILEAMIQGELDVLKDWCYEATYSQLAHPIQQAKAMGLQFHSKILDIDNIDLAMGKMMEQG 386
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN--WVL 225
+ I Q + + ++ DP+ +++ +W R+ NPN W L
Sbjct: 387 PVLIITFQAQLVMVIRNVKGEVVEGDPDKVLRMMYVWALCRDQEELNPNAAWRL 440
>gi|301058972|ref|ZP_07199941.1| Tim44-like domain protein [delta proteobacterium NaphS2]
gi|300446968|gb|EFK10764.1| Tim44-like domain protein [delta proteobacterium NaphS2]
Length = 250
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 83/224 (37%), Gaps = 13/224 (5%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ + +F++ + +G K FS +
Sbjct: 37 LFEILIIGGLIYFLYKKF-------SGKNKSKRSLFSSPDGGGGSGGGYESISSSQYRPP 89
Query: 70 NLDS--INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
++ S I ++ P+ + ++ + + FDP++F A++ + + ++ + ++
Sbjct: 90 DMASSGIPDMAPVNSSVDD-LDTVRHYDPGFDPENFKEFAQDVFFKVQAAWTRRDISVMK 148
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ + +++ ++ + ++ + + + + + I++ ++ ++ +
Sbjct: 149 QHLGTQLLGEYEQHFADLRAKGQENRLENIAVRSVDIVDMGEMGGEPFVIVQFRANLLDY 208
Query: 188 SYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D+ ++ K + W F R+ S W L +
Sbjct: 209 TVDEATGQVLEGSSSEPVKFEERWAFSRSPGSS--QWKLEGIQE 250
>gi|63093892|dbj|BAD98173.1| hypothetical protein [Drosophila parabipectinata]
Length = 428
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD K+FL++ + I+++ G + ++ Y
Sbjct: 270 TELSETMTELVKIDPSFDQKEFLHDCETDIIPNILEAIVRGDLEILKDWCFESTYNIIAT 329
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ K + S ++ I+++++ + E + I Q I D+ ++ DP
Sbjct: 330 PITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVEGDP 389
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
E +V +W R+ NP W L+
Sbjct: 390 EKVMRVHYVWVLCRDRNELNPKAAWRLME 418
>gi|145334561|ref|NP_001078626.1| P-P-bond-hydrolysis-driven protein transmembrane transporter
[Arabidopsis thaliana]
gi|26451284|dbj|BAC42743.1| unknown protein [Arabidopsis thaliana]
gi|332006296|gb|AED93679.1| Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein [Arabidopsis thaliana]
Length = 313
Score = 88.0 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 19/159 (11%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
L T + F EA Y+ I G+ I K V R+Y + +
Sbjct: 156 ELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEI 215
Query: 143 STRKS--------------NEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
R++ + +++ L+GID + A + +T+ + + +
Sbjct: 216 KQREAMWDGVYWEMVEPVVKIRTLQARLIGIDRTDLKKA-----FIQLTLEFLTKQKFEA 270
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
YD + + D V DIW F +++ + W L
Sbjct: 271 YDAKGNVAAGDKNKEVLVRDIWVFEKSLFHTGAYWRLCG 309
>gi|242051094|ref|XP_002463291.1| hypothetical protein SORBIDRAFT_02g041340 [Sorghum bicolor]
gi|241926668|gb|EER99812.1| hypothetical protein SORBIDRAFT_02g041340 [Sorghum bicolor]
Length = 158
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 9/141 (6%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
T + K F ++A Y+ + G ++ K++ R++ + L R+S +V
Sbjct: 14 TGYTKKQFYDQALKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKRRQSMWNSVHWE 73
Query: 156 LV----GIDDMK-----IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
LV I ++ + ++++ + +T+ V + +Y+ ++S D V
Sbjct: 74 LVEPAVSIRTLRARMIGLDKNDLDKSFIQLTLEFVTKQKFEAYNSKGAVVSGDKSKEVLV 133
Query: 207 IDIWTFVRNIPPSNPNWVLIS 227
DIW F R++ W +
Sbjct: 134 KDIWVFERSLFHPGAYWRVCG 154
>gi|197117400|ref|YP_002137827.1| transport protein [Geobacter bemidjiensis Bem]
gi|197086760|gb|ACH38031.1| transport protein, Tim44-like domain, putative [Geobacter
bemidjiensis Bem]
Length = 322
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 22/219 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
ILL A I ++ ++ V K+ +P + + + +I + +
Sbjct: 120 ILLLAGIA-YLIYRM--VKKKR----EPETDVYGQRP--------NVIDIDHYQVSQGSA 164
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ + + I + FD F + + + I ++ + + L
Sbjct: 165 QSLGYQQAQDEVEEGLSHIRQMDPSFDEGRFNDAVMDMFFKIQGAWMNRDLSGVSALFTD 224
Query: 133 RVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY- 189
+ + R +++ + + +++I A E +IT I + +
Sbjct: 225 EMRAAMQGDVDQLLRDKRVNRLEN--IAVRNVEISEAWQESGKDFITALIYANLLDYTTD 282
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
D ++S K + WTF R + N W L +
Sbjct: 283 DATGAVVSGSKADPVKFEEYWTFTRTVG--NNPWKLSAI 319
>gi|118581965|ref|YP_903215.1| import inner membrane translocase, subunit Tim44 [Pelobacter
propionicus DSM 2379]
gi|118504675|gb|ABL01158.1| import inner membrane translocase, subunit Tim44 [Pelobacter
propionicus DSM 2379]
Length = 317
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 70/222 (31%), Gaps = 25/222 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F I+L A + ++ + K +R + +
Sbjct: 116 MFEIILLAGL-GYLIYR----------FIKKKRELSLATPSGQGGYQREAVAPVSYGYQA 164
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ P + + + + + FD F + + + I ++ + + L
Sbjct: 165 EV-------PASSDVESGISHVRQMDPTFDESSFNDAVMDIFFRIQGAWMNRDLAPVSSL 217
Query: 130 VDSRVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ + + F + + R +++ + + ++I E Y+T +
Sbjct: 218 LTDEMKRIFQEDVDRLLRDRQVNRLEN--IAVRKVEITEVWQESGQDYVTALVHANLFDY 275
Query: 188 SY-DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D ++S K + WTF R++ N W L +
Sbjct: 276 TTDDATGAVVSGSKSEPVKFEEYWTFTRSVG--NNPWRLSAI 315
>gi|195037110|ref|XP_001990008.1| GH18477 [Drosophila grimshawi]
gi|193894204|gb|EDV93070.1| GH18477 [Drosophila grimshawi]
Length = 452
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 71/178 (39%), Gaps = 7/178 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + D + + T L++ M ++V + +FD K+FL++ + I
Sbjct: 267 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPNFDQKEFLHDCEK--DII 324
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + ++ Y ++ K + + S ++ I+++++ + E
Sbjct: 325 PNVLEAIVRGDLEILKDWCFESTYNIIATPITQAKKSGLYLDSKILDIENIELAMGKVME 384
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ ++ DP+ +V +W R+ NP W L+
Sbjct: 385 QGPVLIITFQAQQIMCVRDQKAQVVEGDPDKVMRVHYVWVLCRDRNELNPKAAWRLME 442
>gi|198435825|ref|XP_002124932.1| PREDICTED: similar to translocase of inner mitochondrial membrane
44 homolog [Ciona intestinalis]
Length = 431
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 69/177 (38%), Gaps = 7/177 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ ++ G D + + GT ++KVM +I + +F + FL+ R +E I
Sbjct: 246 ESDNVLIRGSRFITDKISGVAGSLFGGTDISKVMTEIARIDPEFSAQGFLDFCR--FEII 303
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ +G + ++ Y + + + + V +D + I A+ +
Sbjct: 304 PNLLEAISQGNENIVKDWCSEAPYNQLMFPVKQAQQIGCRYELTTVDLDHVDIAGATKVD 363
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN--PNWVLI 226
+ I Q I +K ++ D + KV +W R++ + W +I
Sbjct: 364 QGPVLVISFQTQQIMVVRNKKGDIVEGDSDQIMKVFHVWALCRDVEEMDRRAAWKII 420
>gi|195569739|ref|XP_002102866.1| GD20131 [Drosophila simulans]
gi|194198793|gb|EDX12369.1| GD20131 [Drosophila simulans]
Length = 304
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 119 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 178
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 179 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGLYLDSKILDIENIELAMGKVMEQG 238
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 239 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 294
>gi|61806584|ref|NP_001013525.1| mitochondrial import inner membrane translocase subunit TIM44
[Danio rerio]
gi|60649493|gb|AAH90431.1| Translocase of inner mitochondrial membrane 44 homolog (yeast)
[Danio rerio]
gi|182891522|gb|AAI64677.1| Timm44 protein [Danio rerio]
Length = 452
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA-RNSYEA 113
+ D + I T +++V+ +I+ V FD FL + ++
Sbjct: 267 ESDNAFIRASRAVTDKMTDIIGGLFSKTEMSEVLTEILKVDPTFDKDSFLKQCEKDIIPN 326
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ +G++ ++ Y + K+ S ++ ID++ + + E
Sbjct: 327 ILEAMIQGELDVLKDWCYEATYSQLAHPIQQAKAMGLQFHSKILDIDNIDLAMGKMMEQG 386
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN--WVL 225
+ I Q + + ++ DPE +++ +W R+ NPN W L
Sbjct: 387 PVLIITFQAQLVMVIRNVKGEVVEGDPEKVLRMMYVWALCRDQEELNPNAAWRL 440
>gi|242051390|ref|XP_002463439.1| hypothetical protein SORBIDRAFT_02g043830 [Sorghum bicolor]
gi|241926816|gb|EER99960.1| hypothetical protein SORBIDRAFT_02g043830 [Sorghum bicolor]
Length = 474
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 13/196 (6%)
Query: 28 RGVLG--------KKTGNE--KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINEL 77
R VLG K G+ K + + + + + I +L
Sbjct: 245 RTVLGEKWEAFKNKIQGHPVYKRVDEYTKPVVTKGQEVAEDVRERWETSDNPVVQKIQDL 304
Query: 78 FP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
T R+I F DF+ + + + + ++ ++ +G V ++K V
Sbjct: 305 NESLLEETSAAVTFREIRQRDPSFSLSDFVADVQETIKPVLTAYSKGDVETLKKYCTKEV 364
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNL 194
+ S ++ I + ++ + ++ I +R Q I D++
Sbjct: 365 IERCKGEREAYASQGIFFDHKILHISEADVLETKMFGSSPIIILRFQTQQIYCVRDREGQ 424
Query: 195 LISSDPEIFGKVIDIW 210
+ + V W
Sbjct: 425 VTEGGQDTIQTVFYSW 440
>gi|159479570|ref|XP_001697863.1| mitochondrial inner membrane translocase [Chlamydomonas
reinhardtii]
gi|158273961|gb|EDO99746.1| mitochondrial inner membrane translocase [Chlamydomonas
reinhardtii]
Length = 264
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 3/150 (2%)
Query: 64 KGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + + EL G+ ++ MR+I FD F+ + +V +F +
Sbjct: 80 ETSDHPVVHKVEELKSSMFTGSEASRAMREIRVRDQAFDMNRFVQSVKLDAPVVVKAFLK 139
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ + + + + F S++ I D++I+ + ++ +I +
Sbjct: 140 HDLDTLSQHCGPELMERFAGIFKHFNEQGLFEDPSILFIGDVEIVEVRLMDDDPFIIAQF 199
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIW 210
Q + + DK ++ D +V W
Sbjct: 200 HCQQLKCTRDKFGNVVDGDANTIQRVYYFW 229
>gi|194746677|ref|XP_001955803.1| GF18940 [Drosophila ananassae]
gi|190628840|gb|EDV44364.1| GF18940 [Drosophila ananassae]
Length = 461
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD K+FL++ + I+++ G + ++ +
Sbjct: 303 TELSETMTELVKIDPSFDQKEFLHDCETDIIPNILEAIVRGDLEILKDWCFESTFNIIAT 362
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ K + S ++ I+++++ + E + I Q I D+ ++ DP
Sbjct: 363 PITQAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVEGDP 422
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
E +V +W R+ NP W L+
Sbjct: 423 EKVMRVHYVWVLCRDRNELNPKAAWRLME 451
>gi|218200130|gb|EEC82557.1| hypothetical protein OsI_27102 [Oryza sativa Indica Group]
gi|222637566|gb|EEE67698.1| hypothetical protein OsJ_25363 [Oryza sativa Japonica Group]
Length = 321
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
T + K+F ++A Y+ + G ++ K++ R++ + L R+S +V
Sbjct: 177 TGYTKKEFYDQAFKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKKRQSMWSSVHWE 236
Query: 156 LV---------GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
LV + + +++ + +T+ V + +Y+ ++S D V
Sbjct: 237 LVEPAVCIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNTKGEVVSGDKSKEVLV 296
Query: 207 IDIWTFVRNIPPSNPNWVLIS 227
DIW F R++ W +
Sbjct: 297 KDIWVFERSLFHPGAYWRVCG 317
>gi|25009742|gb|AAN71045.1| AT09326p [Drosophila melanogaster]
gi|40882559|gb|AAR96191.1| AT24717p [Drosophila melanogaster]
Length = 459
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 274 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 333
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 334 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGLYLDSKILDIENIELAMGKVMEQG 393
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 394 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 449
>gi|307199490|gb|EFN80103.1| Mitochondrial import inner membrane translocase subunit TIM44
[Harpegnathos saltator]
Length = 410
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EA 113
+ + D + I T L++ + +I + +F FL + +
Sbjct: 225 ESDNAVLRASRLLTDKVTDIIGGLFQKTELSETLTEICKLDPNFSRIQFLKDCETDFIPN 284
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G + ++ Y L + + S ++ ID++ ++ + +
Sbjct: 285 ILEAMVRGDLEILKDWCHEAPYNVIAQPLKEVQKLGYRLDSKILDIDNVDLMMGKMMDQG 344
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ I Q I + N ++ DP+ +V IW R+ NP W L
Sbjct: 345 PVLIIGFQCQQIMCVRNSKNEVVEGDPQKVMRVNYIWVLCRDRTELNPKAAWRL 398
>gi|219884429|gb|ACL52589.1| unknown [Zea mays]
Length = 303
Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
T + F ++A Y+ + G ++ +++ R++ + L R+S +V
Sbjct: 159 TGYTKNQFYDQALKIYKEVNTLMAHGDTSSLREILTERMHSTIKNELKRRQSMWNSVHWE 218
Query: 156 LV----GIDDMK-----IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
LV I ++ + +++ + +T+ V + +Y+ ++S D V
Sbjct: 219 LVEPAVSIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNSKGAVVSGDKSKEVLV 278
Query: 207 IDIWTFVRNIPPSNPNWVLIS 227
DIW F R++ W +
Sbjct: 279 KDIWVFERSLFHPGAYWRVCG 299
>gi|195497862|ref|XP_002096280.1| GE25149 [Drosophila yakuba]
gi|194182381|gb|EDW95992.1| GE25149 [Drosophila yakuba]
Length = 459
Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 274 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 333
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 334 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGLYLDSKILDIENIELAMGKVMEQG 393
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 394 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 449
>gi|229586715|ref|YP_002845216.1| hypothetical protein RAF_ORF0564 [Rickettsia africae ESF-5]
gi|228021765|gb|ACP53473.1| Unknown [Rickettsia africae ESF-5]
Length = 211
Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I F++ +L LG + E+ + G+ V + + +
Sbjct: 1 MSPQIIELLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSIVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTAQDIKAFKDIIVEHNITAVVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R ++F S SS + K + N ++I +
Sbjct: 121 KDAKELSELIDKRYLEEFEKITP---SYGDFFDSSTL---SAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|115624784|ref|XP_001203738.1| PREDICTED: similar to MGC82677 protein [Strongylocentrotus
purpuratus]
gi|115633997|ref|XP_001177162.1| PREDICTED: similar to MGC82677 protein [Strongylocentrotus
purpuratus]
Length = 455
Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 7/176 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ I+ D + + T L+ V+ +I+ + F + FL E I
Sbjct: 270 ESDNIMVRASKAVTDRVSQLLGGVFSPTELSGVLTEIIKIDPTFTKEGFLKMCEL--EII 327
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + I+ Y + S ++ +D +++ + +
Sbjct: 328 PNILEAMIRGDLEIIKDWCYEAPYNQLATPIKQATQMGYKFDSKVLDVDMVELSMGKMMD 387
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN--WVL 225
+ I V Q I A + +++ D E +V +W R+ +P W L
Sbjct: 388 QGPVLVITFVAQQIMAVRNAKGVVVEGDLEKVMRVTYVWVLCRDQEVLDPTSAWRL 443
>gi|226500730|ref|NP_001147017.1| LOC100280627 [Zea mays]
gi|194707278|gb|ACF87723.1| unknown [Zea mays]
gi|195606496|gb|ACG25078.1| tim44-like domain containing protein [Zea mays]
Length = 303
Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
T + F ++A Y+ + G ++ K++ R++ + L R+S +V
Sbjct: 159 TGYTKNQFYDQALKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKRRQSMWNSVHWE 218
Query: 156 LV----GIDDMK-----IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
LV I ++ + +++ + +T+ V + +Y+ ++S D V
Sbjct: 219 LVEPAVSIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNSKGAVVSGDKSKEVLV 278
Query: 207 IDIWTFVRNIPPSNPNWVLIS 227
DIW F R++ W +
Sbjct: 279 KDIWVFERSLFHPGAYWRVCG 299
>gi|195353703|ref|XP_002043343.1| GM10044 [Drosophila sechellia]
gi|194127457|gb|EDW49500.1| GM10044 [Drosophila sechellia]
Length = 458
Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + FD KDFL + + I++S G + ++ + +
Sbjct: 300 TELSETMTELVKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIAN 359
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ + ++ DP
Sbjct: 360 PIKEAKKAGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDP 419
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
E +V +W R+ NP W L+
Sbjct: 420 EKVMRVHYVWVLCRDRNELNPKAAWRLME 448
>gi|34580481|ref|ZP_00141961.1| hypothetical protein [Rickettsia sibirica 246]
gi|157828477|ref|YP_001494719.1| hypothetical protein A1G_03400 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933195|ref|YP_001649984.1| hypothetical protein RrIowa_0720 [Rickettsia rickettsii str. Iowa]
gi|28261866|gb|EAA25370.1| unknown [Rickettsia sibirica 246]
gi|157800958|gb|ABV76211.1| hypothetical protein A1G_03400 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908282|gb|ABY72578.1| hypothetical protein RrIowa_0720 [Rickettsia rickettsii str. Iowa]
Length = 211
Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I F++ +L LG + E+ + G+ V + + +
Sbjct: 1 MSPQIIELLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSIVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTAQDIKAFKDIIVEHNITAVVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R ++F S SS + K + N ++I +
Sbjct: 121 KDAKELSELIDKRYLEEFEKITP---SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|321466881|gb|EFX77874.1| hypothetical protein DAPPUDRAFT_305300 [Daphnia pulex]
Length = 420
Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 60/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++ + +I + DF ++FL + Y+ I +++ G + ++ +
Sbjct: 262 TEMSEALTEICKMDPDFSKEEFLK--KCEYDIIPNVLEAMARGDLDILKDWCHEGPFNIL 319
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ + S + ++ +D++ + + E + I Q I DK N ++
Sbjct: 320 STPIKHALSQGYVIDCRVLDVDNVDLAMGKVMEQGPILVITFTAQQIMCVRDKANNIVEG 379
Query: 199 DPEIFGKVIDIWTFVRNIPPSNPN--WVL 225
D E +V +W R+ + N W L
Sbjct: 380 DAEKVMRVNYVWVLCRDQTELDVNAAWRL 408
>gi|115923274|ref|XP_783807.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115954833|ref|XP_001197316.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 368
Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 7/176 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ I+ D + + T L+ V+ +I+ + F + FL E I
Sbjct: 183 ESDNIMVRASKAVTDRVSQLLGGVFSPTELSGVLTEIIKIDPTFTKEGFLKMCEL--EII 240
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + I+ Y + S ++ +D +++ + +
Sbjct: 241 PNILEAMIRGDLEIIKDWCYEAPYNQLATPIKQATQMGYKFDSKVLDVDMVELSMGKMMD 300
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN--WVL 225
+ I V Q I A + +++ D E +V +W R+ +P W L
Sbjct: 301 QGPVLVITFVAQQIMAVRNAKGVVVEGDLEKVMRVTYVWVLCRDQEVLDPTSAWRL 356
>gi|260898311|ref|ZP_05906807.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus Peru-466]
gi|260901532|ref|ZP_05909927.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus AQ4037]
gi|308088422|gb|EFO38117.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus Peru-466]
gi|308110872|gb|EFO48412.1| import inner membrane translocase, subunit Tim44 [Vibrio
parahaemolyticus AQ4037]
Length = 237
Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G ++
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNASKFEQPNMQNFEQQPNTNAGG 155
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FTGFGAQTDVPHNYP----------PGFDQAAFINGSREHYRILQGAWNHNQLDTIEEYV 205
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
+++D + R E + ++ + D +I+
Sbjct: 206 SPSLFEDLK---AERAKLEGEQHTDVMYV-DAEIVR 237
>gi|221130340|ref|XP_002162926.1| PREDICTED: similar to translocase of inner mitochondrial membrane
44 [Hydra magnipapillata]
Length = 325
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 7/175 (4%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ +I + L + + + +I + F+ F+ E +E I
Sbjct: 140 ESDNVIIRATRVVTNKLSDVFSDVFSQSEQAATIAEITKIDPSFNKDKFIKECE--FEII 197
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
++++ G + ++ V+ + + + +S ++ I D+ ++ A I E
Sbjct: 198 PTVLEAYLRGDIECLQDWCHEGVFSILSTQIKNNSAQGLVNESRILDIRDVDLVMAKIME 257
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN--PNWV 224
+ + Q +S D +I + V +W R+ + W
Sbjct: 258 QGPVLILTFQAQQVSIMKDSKGKIIEGGEDNIESVNYVWAMCRDQSIYDHHSAWR 312
>gi|15892527|ref|NP_360241.1| hypothetical protein RC0604 [Rickettsia conorii str. Malish 7]
gi|15619688|gb|AAL03142.1| unknown [Rickettsia conorii str. Malish 7]
Length = 211
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 84/229 (36%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I F++ +L LG + E+ + G+ + + + +
Sbjct: 1 MSPQIIELLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPIIKDVTYSIVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTAQDIKAFKDIIVEHNITAIVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R ++F S SS + K + N ++I +
Sbjct: 121 KDAKELSELIDKRYLEEFEKITP---SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|145349615|ref|XP_001419224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579455|gb|ABO97517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 221
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 15/194 (7%)
Query: 49 YVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR 108
R E + + F + F EA+
Sbjct: 17 AEPYAGPPRRPTLAEWATTSKGWRYAYEAATSRAKDAYALSKCAKEVRGFTLEGFKQEAK 76
Query: 109 NSYEAIVDSFFE-GKVHAI----EKLVDSRVYQDFNDSLSTRKSNEK-NVKSSLVGIDDM 162
Y+ I S G + + D +R+ V +L ID+
Sbjct: 77 QMYKMINASSANVGHGKTLEHETRHATTDKTQSDLKRERKSRERGGWARVDWNLESIDEC 136
Query: 163 KIINASIE---------ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+++ + +T R G+ A+YD L++ DP+ V D W F
Sbjct: 137 QVVRGRLIMANANDSNGPGFAQLTTRFRGKQRFAAYDARGRLVAGDPDEILDVEDFWVFE 196
Query: 214 RNIPPSNPNWVLIS 227
+ N W L
Sbjct: 197 HGLKIPNARWRLAG 210
>gi|238650294|ref|YP_002916146.1| hypothetical protein RPR_00625 [Rickettsia peacockii str. Rustic]
gi|238624392|gb|ACR47098.1| hypothetical protein RPR_00625 [Rickettsia peacockii str. Rustic]
Length = 211
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 84/230 (36%), Gaps = 27/230 (11%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSK------RDERGI 59
M +L+FA I F++ +L LG + E+ + G+ V + +
Sbjct: 1 MSPQIIELLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSIVKSNKEE 60
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ + I I T + M + FDP F+N A+ +++ I+++ +
Sbjct: 61 KNIPTAQDIKVFKDIIVEHNI-TAVVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAY 119
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+ + +L+D R ++F S SS + K + N ++I +
Sbjct: 120 KKDAKELSELIDKRYLEEFEKITP---SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLL 173
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 174 FQGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|260310504|gb|ACX36515.1| RE11601p [Drosophila melanogaster]
Length = 428
Score = 85.7 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 243 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 302
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ E
Sbjct: 303 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIENIELAMGKFMEQG 362
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 363 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 418
>gi|24648138|ref|NP_650786.2| CG11779, isoform A [Drosophila melanogaster]
gi|78706780|ref|NP_001027193.1| CG11779, isoform D [Drosophila melanogaster]
gi|7300484|gb|AAF55639.1| CG11779, isoform A [Drosophila melanogaster]
gi|71854566|gb|AAZ52532.1| CG11779, isoform D [Drosophila melanogaster]
Length = 459
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 274 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 333
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 334 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIENIELAMGKVMEQG 393
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 394 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 449
>gi|195388820|ref|XP_002053076.1| GJ23681 [Drosophila virilis]
gi|194151162|gb|EDW66596.1| GJ23681 [Drosophila virilis]
Length = 428
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 69/178 (38%), Gaps = 7/178 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + D + + T L++ M ++V + +FD K+FL + + I
Sbjct: 243 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPNFDQKEFLYDCEK--DII 300
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + ++ Y + K + + S ++ I+++++ + E
Sbjct: 301 PNVLEAIVRGDLEILKDWCFESTYNIIATPIMQAKKSGLYLDSKILDIENIELAMGKVME 360
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ ++ +P+ +V +W R+ NP W L+
Sbjct: 361 QGPVLIITFQAQQIMCVRDQKAQVVEGNPDKVMRVHYVWVLCRDRNELNPKAAWRLME 418
>gi|326796036|ref|YP_004313856.1| import inner membrane translocase subunit Tim44 [Marinomonas
mediterranea MMB-1]
gi|326546800|gb|ADZ92020.1| import inner membrane translocase subunit Tim44 [Marinomonas
mediterranea MMB-1]
Length = 284
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 80/232 (34%), Gaps = 45/232 (19%)
Query: 6 MDSGDFL------ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGI 59
M SG F ILLFA I F+ + KR +
Sbjct: 89 MGSGAFDGISFGDILLFALI-GFLIYK--------------------FFIAPKKRAAQQA 127
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
G G ++ + P+ + + + F+ + F+ EA+N Y A+ ++
Sbjct: 128 QAAGHGAYREMPQDSFQPSPMAGGAGFGGQPEIQLPPGFNEQAFVAEAKNHYIALQKAWD 187
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITI 178
+ I++ V +Y R K+ +V + + ++ +T I++
Sbjct: 188 DSNFETIQEYVSPELYNMLK---EERAKLGADKPKTDVVSLM-VDLVRGEFIGSTASISL 243
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ G K+ + +IW +N+ ++ +WV++ +
Sbjct: 244 QFSGWI------KEG-------SETSETKEIWHLEKNMSDASSSWVIVGIQQ 282
>gi|114775481|ref|ZP_01451049.1| import inner membrane translocase, subunit Tim44 [Mariprofundus
ferrooxydans PV-1]
gi|114553592|gb|EAU55973.1| import inner membrane translocase, subunit Tim44 [Mariprofundus
ferrooxydans PV-1]
Length = 289
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 74/219 (33%), Gaps = 29/219 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I++ + +F LR K++ P ++G G+ D D
Sbjct: 99 IVMIGAVLALLFFFLR----KRS---TPAQPSYAGGQPMHD--------YGQSYTTDVED 143
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ E + +R D D K F+ A+ Y + ++ G I K +
Sbjct: 144 QVYEENTPRDPVGTALR------PDIDEKHFIPAAKQIYVRMQKAWDNGDTEDIRKFCTA 197
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+ + +++ ++ + ++ ++ ++ +E + ++ + + D
Sbjct: 198 EI----AERIASDMKPGTENRTEVATLN-AELADSWVESDLEWVAVNFTAMLREQTLDAS 252
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +V ++W F +P W L +
Sbjct: 253 GTTLD---DQTAEVNEVWIFQHAPKSDDPTWYLAGIQQA 288
>gi|302836449|ref|XP_002949785.1| hypothetical protein VOLCADRAFT_104441 [Volvox carteri f.
nagariensis]
gi|300265144|gb|EFJ49337.1| hypothetical protein VOLCADRAFT_104441 [Volvox carteri f.
nagariensis]
Length = 393
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 3/150 (2%)
Query: 64 KGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + + +L G+ ++ MR+I FD F+ + +V +F +
Sbjct: 209 ETSDHPVVHKVEDLKARMFTGSEASRAMREIRVRDPAFDMNRFVQSVKLDAPTVVRAFLK 268
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ A+ + + + F S++ I D++I+ + ++ +I +
Sbjct: 269 HDLEALSQHCGPELLERFAGIFKHFNEQGVFEDPSILFIGDVEIVEVRLMDDDPFIIAQF 328
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIW 210
Q + + DK +I +V W
Sbjct: 329 HCQQLKCTRDKFGNVIDGSANQIQRVYYFW 358
>gi|67459060|ref|YP_246684.1| hypothetical protein RF_0668 [Rickettsia felis URRWXCal2]
gi|67004593|gb|AAY61519.1| unknown [Rickettsia felis URRWXCal2]
Length = 211
Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I F++ +L LG + E+ + G+ V + + +
Sbjct: 1 MSPQIIELLIFAVIAFYIINKLITTLGSTSEEEQTKQKSYFGEPVIKDVTYSTVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTAQDIKAFKDIIVEHNITAVVDGMEQVHKHLYSFDPIKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R ++F K + K + N ++I +
Sbjct: 121 KDAKELSELIDKRYLEEFE------KITPSYGDFFDLSALSAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|24648140|ref|NP_732403.1| CG11779, isoform B [Drosophila melanogaster]
gi|7300485|gb|AAF55640.1| CG11779, isoform B [Drosophila melanogaster]
Length = 428
Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 243 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 302
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 303 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIENIELAMGKVMEQG 362
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 363 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 418
>gi|47225693|emb|CAG08036.1| unnamed protein product [Tetraodon nigroviridis]
Length = 397
Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLN-EARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL R+ I+++ +G++ ++ Y
Sbjct: 239 TEMSEVLTEILKVDPSFDKDSFLKLCERDIIPNILEAMIQGELDVLKDWCYEATYSQLAH 298
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ ID++ + + + + I Q + + ++ DP
Sbjct: 299 PIQQAKATGLKFHSKILDIDNIDLAMGKMMDQGPVLIITFQAQLVMVIRNPKGEVVEGDP 358
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ +++ +W R+ NP W L
Sbjct: 359 DKVIRMMYVWALCRDQEELNPYAAWRL 385
>gi|195452294|ref|XP_002073291.1| GK13236 [Drosophila willistoni]
gi|194169376|gb|EDW84277.1| GK13236 [Drosophila willistoni]
Length = 457
Score = 85.3 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ M ++V + +FD K+FL++ + I+++ G + ++ Y +
Sbjct: 299 TELSETMTELVKIDPNFDQKEFLHDCETDIIPNILEAIVRGDLDILKDWCFESTYSIIST 358
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K + S ++ I+++++ + E + I Q I D+ ++ DP
Sbjct: 359 PILNAKKTGLYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKAQVVEGDP 418
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
E +V +W R+ NP W L+
Sbjct: 419 EKVMRVHYVWVLCRDRNELNPKAAWRLME 447
>gi|212722222|ref|NP_001131676.1| hypothetical protein LOC100193036 [Zea mays]
gi|194692218|gb|ACF80193.1| unknown [Zea mays]
Length = 474
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 49/158 (31%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
D R + +NE T R+I F DF+ + + +
Sbjct: 283 AEDVRERWETSDNPVVQKIQDLNESLLEETSAAVTFREIRQRDPSFSLSDFVADVQEMIK 342
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
++ ++ +G ++ V + S ++ I + ++ + +
Sbjct: 343 PVLTAYSKGDAETLKNYCTKEVIERCKGEREAYASQGIFFDHKILHISEADVLETKMFGS 402
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
+ I +R Q I D++ + + V W
Sbjct: 403 SPIIILRFQTQQIYCVRDREGQVTEGGQDTIQTVFYSW 440
>gi|194900032|ref|XP_001979561.1| GG16152 [Drosophila erecta]
gi|190651264|gb|EDV48519.1| GG16152 [Drosophila erecta]
Length = 459
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 3/176 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 274 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPCFDQKDFLRDCETDIIPN 333
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 334 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGLYLDSKILDIENIELAMGKVMEQG 393
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ + ++ DPE +V +W R+ NP W L+
Sbjct: 394 PVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWVLCRDRNELNPKAAWRLME 449
>gi|242012401|ref|XP_002426921.1| import inner membrane translocase subunit TIM44, putative
[Pediculus humanus corporis]
gi|212511150|gb|EEB14183.1| import inner membrane translocase subunit TIM44, putative
[Pediculus humanus corporis]
Length = 474
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +IV V F FL++ + I+++ G + + Y +
Sbjct: 316 TELSETLTEIVKVDPGFTKAKFLHQCETDIIPNILEAMVRGDLDILRDWCHDGPYNLLSQ 375
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ + S ++ I+ + + I + + I Q I DK+N +I DP
Sbjct: 376 PIKQIKAMGGKLDSKILDIEGLDLTVGKIMDQGPVLIITFTCQQIQCVRDKNNKVIDGDP 435
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ +V +W R+ +P W L
Sbjct: 436 QKVMRVNYVWALSRDKSVLDPKAAWRL 462
>gi|91206049|ref|YP_538404.1| hypothetical protein RBE_1234 [Rickettsia bellii RML369-C]
gi|157826585|ref|YP_001495649.1| hypothetical protein A1I_01080 [Rickettsia bellii OSU 85-389]
gi|91069593|gb|ABE05315.1| unknown [Rickettsia bellii RML369-C]
gi|157801889|gb|ABV78612.1| hypothetical protein A1I_01080 [Rickettsia bellii OSU 85-389]
Length = 211
Score = 84.5 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 85/229 (37%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA I FF+ +L LG + ++ + G+ V + +
Sbjct: 1 MSPQIIELLIFAGIAFFIINKLITTLGATSDDDPAKQKSYFGEPVIKDVTHSSNKSYEEE 60
Query: 66 KKKDNLDSINE-----LFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I + T + M + F P F+N A+ +++ I+++ ++
Sbjct: 61 KDLPTAQDIKTFKNLIVEQNITAVVDGMETVHKRLNAFQPIKFINNAKIAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ + +LVD R ++F +S S S+ + K N ++I +
Sbjct: 121 NQTEELAELVDKRFLEEFEK-ISD--SYGNFFDSTALN---AKYSEIYTFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ ++ + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEELKEEWTFTRNANTKEVDWFLSNIE 209
>gi|241834608|ref|XP_002415012.1| mitochondrial import inner membrane translocase, subunit TIM44,
putative [Ixodes scapularis]
gi|215509224|gb|EEC18677.1| mitochondrial import inner membrane translocase, subunit TIM44,
putative [Ixodes scapularis]
Length = 415
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 7/176 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + D + I T L++V+ +I + FD +FL + + I
Sbjct: 230 ESDNPLVRASRTLTDKVSDIFGGLFQKTELSEVLTEICKMDPAFDKNEFLRQCET--DII 287
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + + + + + S ++ + ++ + I E
Sbjct: 288 PNVLEAIVRGDLEILRDWCHDAPFNVLSTPIKQAAQLGYRFDSKVLDVTNVDLAMGKIME 347
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ I Q I + ++ DPE ++ W R+ +P W L
Sbjct: 348 QGPVLIITFQSQQIMVVRNAKGDVVEGDPEKIMRMHYAWVLCRDQNELDPRAAWKL 403
>gi|326511515|dbj|BAJ91902.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516904|dbj|BAJ96444.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 47/140 (33%)
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ INE T R+I F DF+ + + + ++ ++ +G + ++K
Sbjct: 308 IQDINETIFEETATAASFREIRRRDPSFSLSDFIGDVQEMIKPVLTAYSKGDLKTLKKYC 367
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ + S ++ I D + + +T I + Q I D
Sbjct: 368 TKEILERCEGERKGYASQGIFFDHKILHISDADVRETKMLGSTPIILVMFRTQEIHCIRD 427
Query: 191 KDNLLISSDPEIFGKVIDIW 210
K+ + + V W
Sbjct: 428 KEGKVTEGGQDSIRTVYYQW 447
>gi|62897685|dbj|BAD96782.1| translocase of inner mitochondrial membrane 44 homolog [Homo
sapiens]
Length = 452
Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 351
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 352 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGEVVEG 411
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 412 DPDKVLRMLYVWALCRDQDELNPYAAWRL 440
>gi|224062145|ref|XP_002300777.1| predicted protein [Populus trichocarpa]
gi|222842503|gb|EEE80050.1| predicted protein [Populus trichocarpa]
Length = 484
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 58/167 (34%), Gaps = 8/167 (4%)
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ +++ + ++I F DF+ E + + +++++ +G + ++K
Sbjct: 312 IQDVSDSIFQESDAAASFKEIRRKDPSFSLMDFVAEVQEAVRPVLNAYIKGDIDTLKKYC 371
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V +++ + ++ I D+++ + + I + Q + D
Sbjct: 372 TPEVINRCEAEHKAFQAHGIFFDNKILHITDVEVRETKMMGTSPIIIVVFQTQQVHCVRD 431
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSN-------PNWVLISTKL 230
+ + + V W +R + P W L+ +
Sbjct: 432 RHGAITEGGQDTIHTVYYAWA-MRQVDAEELGGGAIYPIWKLMEMQQ 477
>gi|332852444|ref|XP_003316109.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 isoform 1 [Pan troglodytes]
Length = 452
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 351
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 352 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEG 411
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 412 DPDKVLRMLYVWALCRDQDELNPYVAWRL 440
>gi|33636719|ref|NP_006342.2| mitochondrial import inner membrane translocase subunit TIM44
precursor [Homo sapiens]
gi|25014073|sp|O43615|TIM44_HUMAN RecName: Full=Mitochondrial import inner membrane translocase
subunit TIM44; Flags: Precursor
gi|21708003|gb|AAH33628.1| Translocase of inner mitochondrial membrane 44 homolog (yeast)
[Homo sapiens]
gi|119589360|gb|EAW68954.1| translocase of inner mitochondrial membrane 44 homolog (yeast),
isoform CRA_a [Homo sapiens]
gi|119589361|gb|EAW68955.1| translocase of inner mitochondrial membrane 44 homolog (yeast),
isoform CRA_a [Homo sapiens]
gi|123980796|gb|ABM82227.1| translocase of inner mitochondrial membrane 44 homolog (yeast)
[synthetic construct]
gi|123995621|gb|ABM85412.1| translocase of inner mitochondrial membrane 44 homolog (yeast)
[synthetic construct]
gi|158260291|dbj|BAF82323.1| unnamed protein product [Homo sapiens]
gi|307685105|dbj|BAJ20483.1| translocase of inner mitochondrial membrane 44 homolog [synthetic
construct]
Length = 452
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 351
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 352 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEG 411
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 412 DPDKVLRMLYVWALCRDQDELNPYAAWRL 440
>gi|2809420|gb|AAB97740.1| translocase of inner mitochondrial membrane Tim44 precursor [Homo
sapiens]
Length = 452
Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 351
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 352 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEG 411
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 412 DPDKVLRMLYVWALCRDQDELNPYAAWRL 440
>gi|332296059|ref|YP_004437982.1| import inner membrane translocase subunit Tim44 [Thermodesulfobium
narugense DSM 14796]
gi|332179162|gb|AEE14851.1| import inner membrane translocase subunit Tim44 [Thermodesulfobium
narugense DSM 14796]
Length = 316
Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+++ +++I + F +D ++ + + I ++ E + L + ++ +F +
Sbjct: 171 DVDRGLKEIERAFPSFSEEDLRSKIKEIFVNIQKAWSEKNFTMLRNLTTNEMFLNFQKQI 230
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI 202
N + + M +++A +E+ +Y+T +I D ++ ++ + +
Sbjct: 231 EELNKNGITNFVENISVKRMDLVDAWMEDEKIYVTYKIEATMTDYDVDVNDNILRGNKDK 290
Query: 203 FGKVIDIWTFVRNIPPSNP-NWVLIST 228
++W+FV + W L +
Sbjct: 291 LIDFQELWSFV----SKDSIKWELSAI 313
>gi|66519233|ref|XP_395866.2| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like isoform 1 [Apis mellifera]
Length = 456
Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 13/180 (7%)
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-E 112
+ + + + I T L++ + +I + +FD FL Y E
Sbjct: 270 EESDNPVIRASRLLTEKVTDIVGGLFQKTDLSETLTEICKLDPNFDRIQFLK-----YCE 324
Query: 113 A-----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
I+++ G + ++ Y+ L + + + ++ I+++ +I
Sbjct: 325 TDIIPNILEAMVRGNLEILKDWCHEAPYKLIAQPLIQVEKLGYQLDNKILDINNVDLIMG 384
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ E + I Q I D +I DPE +V IW R+ NP W L
Sbjct: 385 KVMEQGPVLIISFQCQQIMCVRDAKKNVIEGDPEKVMRVNYIWVLCRDPTELNPKAAWRL 444
>gi|170584097|ref|XP_001896855.1| Tim44-like domain containing protein [Brugia malayi]
gi|158595793|gb|EDP34297.1| Tim44-like domain containing protein [Brugia malayi]
Length = 773
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
+ +++V+ +I V +F+ ++L E I +++F G + ++ R Y
Sbjct: 614 SEISEVLSEIQKVDPNFEKNEWLRFCEK--EIIPNVLEAFIRGDLKILKDWCYERAYNIL 671
Query: 139 NDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
+ +++ K S ++ I+ ++++ + E+ I I ++ + + ++
Sbjct: 672 SATVNEYKKINFNTTDSRIIDINRVEMVTGKMMEHGPVIIITFQAYMVNIVRNMEGKVVE 731
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTK 229
DP +V +W R++ NP W ++
Sbjct: 732 GDPNSPVRVHHVWVMCRDMEEYNPRVAWKVLEVH 765
>gi|222055934|ref|YP_002538296.1| import inner membrane translocase subunit Tim44 [Geobacter sp.
FRC-32]
gi|221565223|gb|ACM21195.1| import inner membrane translocase subunit Tim44 [Geobacter sp.
FRC-32]
Length = 315
Score = 82.6 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 62/159 (38%), Gaps = 7/159 (4%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
N P+ ++ + +I S+ FD + F + +++ I ++ + + L+ +
Sbjct: 160 NSSLPVADTVDSGIANIRSMDASFDEQRFKDSVMDTFFRIQGAWMNRDLAPVSILLTEEM 219
Query: 135 YQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY-DK 191
+ +S R +++ + + ++I A E +IT I + + D
Sbjct: 220 KNILQEDVSRLLRDRQVNRLEN--IAVRSVEIAEAWQESGQDFITASIYANLLDYTTDDA 277
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++S + K + WTF R + + W L +
Sbjct: 278 TGAVVSGNRTEPVKFEEYWTFTRPVGAN--AWRLSAIDQ 314
>gi|115471689|ref|NP_001059443.1| Os07g0409700 [Oryza sativa Japonica Group]
gi|50508458|dbj|BAD30582.1| mitochondrial inner membrane translocating protein-like protein
[Oryza sativa Japonica Group]
gi|113610979|dbj|BAF21357.1| Os07g0409700 [Oryza sativa Japonica Group]
gi|215686787|dbj|BAG89637.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701468|dbj|BAG92892.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199472|gb|EEC81899.1| hypothetical protein OsI_25725 [Oryza sativa Indica Group]
gi|222636882|gb|EEE67014.1| hypothetical protein OsJ_23936 [Oryza sativa Japonica Group]
Length = 475
Score = 82.6 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 6/161 (3%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
D R + +NE T R+I F DF A + E
Sbjct: 284 AEDVRERWETSDNPVVQKIQDLNESIFEETATAVSFREIRQRDPSFSLPDF---AGDVQE 340
Query: 113 AI---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
I + ++ +G V ++K V + S ++ I D + +
Sbjct: 341 MIKPVLTAYSKGDVKTLKKYCTKEVIERCKGERDAYASQGIFFDHKILHISDADVRETKM 400
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
+T I + Q I D++ + + V W
Sbjct: 401 MGSTPIIIVGFQTQQIYCVRDREGQVTEGGQDTIQTVFYAW 441
>gi|332701192|ref|ZP_08421280.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
africanus str. Walvis Bay]
gi|332551341|gb|EGJ48385.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
africanus str. Walvis Bay]
Length = 313
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 77/227 (33%), Gaps = 25/227 (11%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
MD IL+FA + F ++ ++ +E ++G + G
Sbjct: 111 MDFLLIGILIFAGVMVF---RMFAA--RRQQSEYSYAGAAQRQAEAPVDQGSW-----GG 160
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ D L S + + R S F+ +FL A+ Y + S+ +
Sbjct: 161 SQWDKLRSAPASGQANGQADSQARP-GSNVPGFNEDEFLRGAKMVYTRLQASWDARDLED 219
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + VY ++ + + + ++ + + + +++ + V T+
Sbjct: 220 IREFTSPEVY----AEIARQAAQDPTPSTTEILLVNARLLEVKQQSAQVLATVYFDVLMR 275
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
DK G+V ++W F+R +W L + E
Sbjct: 276 ---EDKAQN-------APGQVREVWHFLRENDDPKSSWKLEGIQQLE 312
>gi|332852446|ref|XP_512338.3| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 isoform 2 [Pan troglodytes]
Length = 415
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 257 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 314
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 315 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEG 374
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 375 DPDKVLRMLYVWALCRDQDELNPYVAWRL 403
>gi|296232753|ref|XP_002761726.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 [Callithrix jacchus]
Length = 452
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 60/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++ + +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 294 TEMSEALTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 351
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 352 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMLVRNPKGEVVEG 411
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 412 DPDKVLRMLYVWALCRDQDELNPYAAWRL 440
>gi|255567254|ref|XP_002524608.1| mitochondrial import inner membrane translocase subunit tim44,
putative [Ricinus communis]
gi|223536161|gb|EEF37816.1| mitochondrial import inner membrane translocase subunit tim44,
putative [Ricinus communis]
Length = 486
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 60/175 (34%), Gaps = 3/175 (1%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVY 95
K F+G S+ + + + I ++ T ++I
Sbjct: 279 KRFAGISEPVVTKSQEIAEDMRERWETSDNPIVHKIQDVSDTIFQETDAAASFKEIRRRD 338
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F DF+ E + + +++++ +G + ++K S V +S+ +
Sbjct: 339 PSFSLMDFVAEVQEAVRPVLNAYIKGDLETLKKYCTSEVITRCEAEHKAFQSHGIFFDNK 398
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
++ I ++++ + + I + Q + D+D + + V W
Sbjct: 399 ILHISEVEVRETKMMGTSPIIIVAFQTQQVHCVRDRDGAITEGGQDTIHTVYYAW 453
>gi|152997235|ref|YP_001342070.1| import inner membrane translocase subunit Tim44 [Marinomonas sp.
MWYL1]
gi|150838159|gb|ABR72135.1| import inner membrane translocase subunit Tim44 [Marinomonas sp.
MWYL1]
Length = 289
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 60/164 (36%), Gaps = 18/164 (10%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
++ + P+ + + + F+ + F+ EA+N Y + ++ + I
Sbjct: 141 PNSTRDNVQPSPMSGISGFGAQPEIKLPPGFNEQAFVAEAKNHYITLQKAWDDNNFDEIL 200
Query: 128 KLVDSRVYQDFNDSLSTRKSNEK-NVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
V +Y ++ R ++ ++ ++ + +++ +T I+++
Sbjct: 201 DYVSPELYNLL---VAERATHGDNKPRTEVISLM-AELVRGEYIGSTASISLQFS----- 251
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D +IW +N+ +N NW ++ +
Sbjct: 252 ------GWIKEGD--QTSDTNEIWHLEKNMSDANGNWTIVGIQQ 287
>gi|4103602|gb|AAD01797.1| putative mitochondrial inner membrane protein import receptor [Homo
sapiens]
Length = 415
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 257 TEMSEVLTEILRVDPPFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 314
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 315 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEG 374
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 375 DPDKVLRMLYVWALCRDQDELNPYAAWRL 403
>gi|297703381|ref|XP_002828619.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Pongo abelii]
Length = 451
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 293 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 350
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 351 AHPIQQAKALGLQFHSRILDIDNIDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEG 410
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+P+ +++ +W R+ NP W L
Sbjct: 411 NPDEVLRMLYVWALCRDQDELNPYAAWRL 439
>gi|90075058|dbj|BAE87209.1| unnamed protein product [Macaca fascicularis]
Length = 453
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 295 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 352
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 353 AYPIQQAKALGLQFHSRILDIDNIDLAMGKMMEPGPVLIITFQAQLVMVVRNPKGEVVEG 412
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 413 DPDKVLRMLYVWALYRDQDELNPYAAWRL 441
>gi|17508985|ref|NP_491780.1| hypothetical protein T09B4.9 [Caenorhabditis elegans]
gi|6016367|sp|O02161|TIM44_CAEEL RecName: Full=Probable mitochondrial import inner membrane
translocase subunit tim-44; Flags: Precursor
gi|2039379|gb|AAB53011.1| Hypothetical protein T09B4.9 [Caenorhabditis elegans]
Length = 425
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EA-----IVDSFFEG 121
+ + I +F +++V+ +I + +FD +++L + E I+++F
Sbjct: 252 RGVTEKIGSVFSGQNEVSEVLTEIHKIDANFDKQEWLR-----FCETKIIPNILEAFIRF 306
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ ++ R Y + + + S ++ I+ +++ + E + I
Sbjct: 307 DLEVLQSWCHERAYTQLSTVVKEYQKMHFSTKDSRIIDINKVEMATGKMMEQGPVLIISF 366
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLGE 232
I+ + + D ++ DP+ ++ IW R++ NP W L+ + E
Sbjct: 367 QVYMINVTKNADGKVVEGDPDNPKRINHIWVLCRDVEEYNPALAWKLLEVHMQE 420
>gi|222054950|ref|YP_002537312.1| import inner membrane translocase subunit Tim44 [Geobacter sp.
FRC-32]
gi|221564239|gb|ACM20211.1| import inner membrane translocase subunit Tim44 [Geobacter sp.
FRC-32]
Length = 321
Score = 81.8 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 72/222 (32%), Gaps = 24/222 (10%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ILL A I ++ + K Y + + + G +
Sbjct: 118 LFEILLLAGI-GYLIYR----------FVKKNRETAPATYGQTGYQGGTVTPISSGSGYE 166
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ P L + I + FD + F + + + + ++ + + +
Sbjct: 167 AV------QPASDDLTTGLSHIRQMDPSFDEQRFNDGVMDMFFKVQGAWMNRDLSPVNGI 220
Query: 130 VDSRVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ + + + R +++ + + +++I E +IT +I +
Sbjct: 221 FTDEMRRILQEDVERLLRDRQVNRLEN--IAVRNVEIAEVWQESGQDFITAQIYANLLDY 278
Query: 188 SYDK-DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D ++S K + WTF R + N W L +
Sbjct: 279 TTDDTTGAVVSGSKTDPVKFEEYWTFTRPVG--NNQWRLSAI 318
>gi|157964519|ref|YP_001499343.1| hypothetical protein RMA_0619 [Rickettsia massiliae MTU5]
gi|157844295|gb|ABV84796.1| hypothetical protein RMA_0619 [Rickettsia massiliae MTU5]
Length = 211
Score = 81.8 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 25/229 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M +L+FA ITF++ +L LG + E+ + G+ + + + +
Sbjct: 1 MSPQIIELLIFAVITFYIINKLITTLGSTSEEEQTNQKSYFGEPIIKDVTYSTVKSNKEE 60
Query: 66 KKKDNLDSINELFPIG-----TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
K I I T + M + FDP F+N A+ +++ I+++ ++
Sbjct: 61 KNIPTTQDIKAFKDIIVEHNITAVVDGMEQVHKRLYSFDPVKFINNAKTAFQMIIEAAYK 120
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L+D R +F ++ S SS + K + N ++I +
Sbjct: 121 KDAKELSELIDKRYLAEFEK-ITP--SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLLF 174
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G+ ++ + + WTF RN +W L + +
Sbjct: 175 QGK----------NVVD----KIEDLKEEWTFTRNANTKEVDWFLSNIE 209
>gi|258593729|emb|CBE70070.1| Import inner membrane translocase, subunit Tim44 precursor
(fragment) [NC10 bacterium 'Dutch sediment']
Length = 244
Score = 81.5 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 74/221 (33%), Gaps = 16/221 (7%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+++ I ++ V+ +++ + + + + +
Sbjct: 38 LVILGGIGLAIYW----VVKQRS-------RPALIEAPYQHQRTWSAEREPERYQGAAAG 86
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ L++ M I + F+ + + + ++ + I ++
Sbjct: 87 QATMVQE--GDLDQGMAHIRQMDPGFETGRLREICTDLFFKVQAAWGNRDLEPIRTILTP 144
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK- 191
++ + ++ K + + + +++ A E+ Y+T+R + + + D+
Sbjct: 145 EMHTQLGADVMRLRNERKINRLENIAVRSVELTEAWQEQGQDYVTVRFLANLLDYTVDEG 204
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ ++ K + WT R + NP W L + +
Sbjct: 205 TSQVVDGSRTDPVKFEEYWTVTRPVG-PNP-WRLAAINQAD 243
>gi|118103065|ref|XP_418174.2| PREDICTED: similar to Translocase of inner mitochondrial membrane
44 homolog (yeast) [Gallus gallus]
Length = 451
Score = 81.5 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 68/178 (38%), Gaps = 8/178 (4%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ I + D I LF T +++V+ +I+ V FD FL + +
Sbjct: 265 DESDNAFIRASRAVTDKVTDLIGGLFSK-TEMSEVLTEILKVDPSFDKDRFLKQCER--D 321
Query: 113 AI---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
I +++ G++ ++ Y + K+ S ++ ID++ + +
Sbjct: 322 IIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKAMGLQFHSRILDIDNIDLAMGKM 381
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
E + I Q + ++ ++ DP+ +++ +W R+ NP W L
Sbjct: 382 MEQGPVLIITFQAQIVMVIKNQKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRL 439
>gi|291241124|ref|XP_002740467.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Saccoglossus kowalevskii]
Length = 457
Score = 81.5 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 62/176 (35%), Gaps = 7/176 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ + D + + T +++V+ +I+ + F FL + + E I
Sbjct: 272 ESDNAVIRASRVVTDKVSQLLGGVFTKTEMSEVLTEIIKIDPHFSKDKFLRQCES--EII 329
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ G + ++ + + + S ++ ID ++++ + E
Sbjct: 330 PNILEAMIRGDLDVLKDWCYEAPFNAIAVPVRQAIALGYKFDSKVLDIDYLELVMGKMME 389
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP--PSNPNWVL 225
+ I Q I + + ++ D + +V +W R+ + W L
Sbjct: 390 QGPVLIISFQTQQIQVVRNAKHEIVEGDEDKVVRVQYVWVLCRDQEELNPDAAWKL 445
>gi|73987180|ref|XP_542123.2| PREDICTED: similar to Import inner membrane translocase subunit
TIM44, mitochondrial precursor [Canis familiaris]
Length = 454
Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD + FL + N + I +++ G++ ++ Y
Sbjct: 296 TEMSEVLTEILRVDPAFDKERFLQQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 353
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 354 AHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEG 413
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 414 DPDKVLRMLYVWALCRDQDELNPYAAWRL 442
>gi|297275995|ref|XP_001098363.2| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 [Macaca mulatta]
Length = 461
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 303 TEMSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 360
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 361 AYPIQQAKALGLQFHSRILDIDNIDLAMGKMMEPGPVLIITFQAQLVVVVRNPKGEVVEG 420
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 421 DPDKVLRMLYVWALCRDQDELNPYAAWRL 449
>gi|289741253|gb|ADD19374.1| mitochondrial import inner membrane translocase subunit TIM44
[Glossina morsitans morsitans]
Length = 421
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 4/178 (2%)
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYE 112
+ + D + + T L++ M ++ + +FD K FL + +
Sbjct: 234 EESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELCKIDPNFDQKQFLRDCEVDIIP 293
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
I+++ G + ++ Y ++ + + S ++ I+++ ++ + E
Sbjct: 294 NILEATVRGDLEILKDWCFESTYNLIATPINQAIKSGLCLDSKILDIENIDLVMGKVMEQ 353
Query: 173 TVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLIS 227
+ I Q I D+ N ++ DPE +V +W R+ NP W L+
Sbjct: 354 GPVLIITFQAQQIMCLKDRATNKIVEGDPEKVMRVNHVWVLCRDPNELNPKAAWRLLE 411
>gi|311248590|ref|XP_003123248.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Sus scrofa]
Length = 454
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD + FL + N + I +++ G++ ++ Y
Sbjct: 296 TEMSEVLTEILRVDPAFDKERFLQQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 353
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 354 AHPIQQAKALGLQFHSRILDIDNIDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEG 413
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 414 DPDKVLRMLYVWALCRDQDELNPYAAWRL 442
>gi|300798484|ref|NP_001179583.1| mitochondrial import inner membrane translocase subunit TIM44 [Bos
taurus]
gi|297476712|ref|XP_002688909.1| PREDICTED: translocase of inner mitochondrial membrane 44 homolog
(yeast) [Bos taurus]
gi|296485872|gb|DAA27987.1| translocase of inner mitochondrial membrane 44 homolog [Bos taurus]
Length = 454
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 296 TEMSEVLTEILRVDPAFDKDRFLQQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 353
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID + + + E + I Q + + ++
Sbjct: 354 AHPIQQAKALGLQFHSRILDIDHIDLAMGKMMEQGPVLIITFQAQMVMVIKNPKGEVVEG 413
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 414 DPDKVLRMLYVWALCRDQDELNPYAAWRL 442
>gi|85544427|pdb|2CW9|A Chain A, Crystal Structure Of Human Tim44 C-Terminal Domain
Length = 194
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 58/149 (38%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T ++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 36 TEXSEVLTEILRVDPAFDKDRFLKQCEN--DIIPNVLEAXISGELDILKDWCYEATYSQL 93
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + E + I Q + + ++
Sbjct: 94 AHPIQQAKALGLQFHSRILDIDNVDLAXGKXVEQGPVLIITFQAQLVXVVRNPKGEVVEG 153
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ + + +W R+ NP W L
Sbjct: 154 DPDKVLRXLYVWALCRDQDELNPYAAWRL 182
>gi|42569661|ref|NP_181151.3| ATTIM44-2; protein-transmembrane transporting ATPase [Arabidopsis
thaliana]
gi|53828527|gb|AAU94373.1| At2g36070 [Arabidopsis thaliana]
gi|330254108|gb|AEC09202.1| translocase inner membrane subunit 44-2 [Arabidopsis thaliana]
Length = 469
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 11/188 (5%)
Query: 23 VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGT 82
VF +L +G +P K D R + +NE T
Sbjct: 260 VFKRL-------SGMSEPVVN----KSQEIAEDVREKWETSDNPIVHKIQDMNERIFEET 308
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
++I F DF++E + + +++++ +G ++K + +
Sbjct: 309 GSASTYKEIRRRDPSFSLPDFVSEIQEAIRPVLNAYSKGDAKTLKKYCSKELIERCTAEH 368
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI 202
S L+ + ++ I + T I +R Q I D+D + +
Sbjct: 369 RAFTSQGYFFDHKLLHVSEVDIQETKMMGTTPVIIVRFQTQEIFCVRDQDGKIKEGGQDT 428
Query: 203 FGKVIDIW 210
V W
Sbjct: 429 IHTVYYDW 436
>gi|326934236|ref|XP_003213198.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Meleagris gallopavo]
Length = 435
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 68/178 (38%), Gaps = 8/178 (4%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ I + D I LF T +++V+ +I+ V FD FL + +
Sbjct: 249 DESDNAFIRASRAVTDKVTDLIGGLFSK-TEMSEVLTEILKVDPSFDKDRFLKQCER--D 305
Query: 113 AI---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
I +++ G++ ++ Y + K+ S ++ ID++ + +
Sbjct: 306 IIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKAMGLQFHSRILDIDNIDLAMGKM 365
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
E + I Q + ++ ++ DP+ +++ +W R+ NP W L
Sbjct: 366 MEQGPVLIITFQAQVVMVIKNQKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRL 423
>gi|332029994|gb|EGI69819.1| Mitochondrial import inner membrane translocase subunit TIM44
[Acromyrmex echinatior]
Length = 452
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 6/184 (3%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EA 113
+ + D + I T L++ + +I + F FL + +
Sbjct: 267 ESDNAVLRASRLLTDKVSDIIGGLFQKTELSETLTEICKLDPTFCKIQFLKDCETDFIPN 326
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G + ++ Y + K S ++ ID++ ++ + E
Sbjct: 327 ILEAMIRGDLEILKDWCHEGPYNIISQPHREVKKLGHYSDSKILDIDNVDLVMGKMMEQG 386
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWV---LIST 228
+ I Q I + N +I DP+ +V +W R+ NP W L +T
Sbjct: 387 PVLIISFQSQQIMCVKNSKNEVIEGDPQKVMRVNYVWVLCRDRTELNPKAAWRLLDLSAT 446
Query: 229 KLGE 232
+
Sbjct: 447 SSEQ 450
>gi|307181325|gb|EFN68959.1| Mitochondrial import inner membrane translocase subunit TIM44
[Camponotus floridanus]
Length = 452
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 6/157 (3%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T L++ + +I + +F FL + + I+++ G + ++ Y
Sbjct: 294 TELSETLTEICKLDPNFSKIQFLKDCETDFIPNILEAMIRGDLEILKDWCHEGPYNLIAQ 353
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
K S ++ ID++ ++ + E + I Q I + N +I DP
Sbjct: 354 PHKEVKKLGHYSDSKILDIDNVDLMMGKMMEQGPVLIISFQSQQIMCVRNSKNEVIEGDP 413
Query: 201 EIFGKVIDIWTFVRNIP--PSNPNWV---LISTKLGE 232
+ +V +W R+ S W L +T +
Sbjct: 414 QKVMRVNYVWVMCRDRTELNSKAAWRLLDLSATSSEQ 450
>gi|224085633|ref|XP_002307643.1| predicted protein [Populus trichocarpa]
gi|222857092|gb|EEE94639.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 62/167 (37%), Gaps = 8/167 (4%)
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ +++ + +++I F DF+ E + + +++++ +G + ++K
Sbjct: 313 IQDVSDSIFQESDAAASIKEIRRRDLSFSLMDFVAEVQEAIRPVLNAYMKGDIETLKKYC 372
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
S V +++ + ++ I D+++ + + I + Q + D
Sbjct: 373 TSEVINRREAEHKAFEAHGIFFDNKILHISDVEVREIKMMGTSPLIIVAFQTQQVHCIRD 432
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSN-------PNWVLISTKL 230
++ + + V W +R + P P W L+ +
Sbjct: 433 QNGAITEGGQDTIHTVYYAWA-MRQVDPEELGGGAIYPIWKLMEMQQ 478
>gi|196001245|ref|XP_002110490.1| hypothetical protein TRIADDRAFT_54556 [Trichoplax adhaerens]
gi|190586441|gb|EDV26494.1| hypothetical protein TRIADDRAFT_54556 [Trichoplax adhaerens]
Length = 473
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 58/177 (32%), Gaps = 11/177 (6%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-- 112
+ ++ D L + +++ + +I + +F + FL ++
Sbjct: 277 ESDNVVIRATRVVTDRLSDAFSGIFSPSEMSQTLAEISKIDPNFSKEKFL----LHFQHR 332
Query: 113 ---AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+++++F G + ++ Y + + + ++ + D+ I A I
Sbjct: 333 IMPSVLEAFLRGDLPILKDWCHESAYSVLEARIKQLTGMGRKLDFKVLDVRDIDIAMAKI 392
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWV 224
E + + Q I D ++ D V +W R+ + W
Sbjct: 393 MEQGPVLVMTFQAQQILVLRDSSGKVVEGDENHIENVQYVWAMCRDQSIYDAHSAWR 449
>gi|308809217|ref|XP_003081918.1| mitochondrial import inner membrane translocase subunit TIM44,
putative (ISS) [Ostreococcus tauri]
gi|116060385|emb|CAL55721.1| mitochondrial import inner membrane translocase subunit TIM44,
putative (ISS) [Ostreococcus tauri]
Length = 182
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL-VDSRVYQDFND 140
T + R I S F+ DF+ E R ++ ++ G V A+++ + + + +
Sbjct: 16 TEQAEAYRLIRSRDPMFNTNDFIAEVRRDIPKVLGAYLRGDVDALKETNISKEMLERLSG 75
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
++ K+ + V ++ + +++++ + EN + + Q I+ DK ++
Sbjct: 76 QMNLWKAEGQFVDPRILDLSEVELMEVRMMENEPLVVLTFSCQQINCVRDKSGKIVEGGE 135
Query: 201 EIFGKVIDIW 210
+ V +W
Sbjct: 136 DDIQSVHYLW 145
>gi|317487361|ref|ZP_07946152.1| Tim44-like domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921384|gb|EFV42679.1| Tim44-like domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 318
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 77/224 (34%), Gaps = 25/224 (11%)
Query: 13 ILL--FAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ F+ F F + R G +P +G F D T K
Sbjct: 114 ILIGGLLFLAFKFFSRRRA---ATQGAGQPNAGGFDSLRSTPGSDSTHQRTAAPQSGKGG 170
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
D L + + +D FD ++FL A+ +Y + +++ + + I +
Sbjct: 171 FD-WEALTTPSSGQQPLYQDEPKKPAGFDEEEFLRGAKAAYTRLNNAWDKRDLSDIAQFS 229
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
F + + + +K ++ + + + +++ + +
Sbjct: 230 TP----AFQKEIQQQAAEDKTPGNTEIMLVNASLLSVDTVGDEQIAQVYF---------- 275
Query: 191 KDNLLISSDP--EIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
N+L+ DP E V +IW FVR + W L + E
Sbjct: 276 --NVLLREDPSQEAPIDVREIWHFVRP-ASGDGTWKLDGIQQVE 316
>gi|301773124|ref|XP_002921985.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like, partial [Ailuropoda melanoleuca]
Length = 452
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD + FL + N + I +++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKERFLQQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 351
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ ++ S ++ ID++ + + E + I Q + + ++
Sbjct: 352 AHPIQQARALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEG 411
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 412 DPDKVLRMLYVWALCRDQDELNPYAAWRL 440
>gi|258405234|ref|YP_003197976.1| import inner membrane translocase subunit Tim44 [Desulfohalobium
retbaense DSM 5692]
gi|257797461|gb|ACV68398.1| import inner membrane translocase subunit Tim44 [Desulfohalobium
retbaense DSM 5692]
Length = 298
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 75/213 (35%), Gaps = 31/213 (14%)
Query: 21 FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPI 80
F ++L G + P S + S D G + +
Sbjct: 109 VFFVVRLFKGRGTR----GPSSKSPPRQDQRSAPDRFDTAAAG-------WEHLRSKPAG 157
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
G + + S+ DFD ++FL A+ Y+ + +++ + + I V++
Sbjct: 158 GPPPPEPTDEEESIPQDFDTQEFLKGAKIVYQRLQEAWDDRDLEDIRGFTTPEVFR---- 213
Query: 141 SLSTRKSNEK---NVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
R+ ++ ++ +V + ++ N + ++++ + D +
Sbjct: 214 --EIRRQAKEDPNTSQTEIV-LLQAEVRNVRRDGAVTHVSVAFEALLRESPQDSE----- 265
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+V ++W F R+ S+ +W+L +
Sbjct: 266 -----TRQVRELWHFQRDESRSDSHWLLEGLEQ 293
>gi|255086703|ref|XP_002509318.1| mitochondrial protein translocase family [Micromonas sp. RCC299]
gi|226524596|gb|ACO70576.1| mitochondrial protein translocase family [Micromonas sp. RCC299]
Length = 415
Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 3/183 (1%)
Query: 29 GVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVM 88
V K G ++ + + + R+ T D F T +
Sbjct: 198 SVFSKLEGLKQTPAYKKGEEMLEDARERW--ETSDNPMVHRIQDITEGAFFAETEQAEAY 255
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK-LVDSRVYQDFNDSLSTRKS 147
R + DF+ F+ E R ++ ++ +G V A+E+ V + + + +
Sbjct: 256 RVLQQRVPDFNMNGFIAEVRRDVPKVLGAYLKGDVEALERCAVSKEMLERMGGQMKLWQH 315
Query: 148 NEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
+ V ++ + +M+++ +N I ++ Q I+ +KD ++ + V
Sbjct: 316 EGQFVDPRILHLSEMELVEVRTLDNAPMIVLQFSCQQINCVRNKDGEIVEGAEDDIQSVH 375
Query: 208 DIW 210
+W
Sbjct: 376 YLW 378
>gi|148262974|ref|YP_001229680.1| import inner membrane translocase, subunit Tim44 [Geobacter
uraniireducens Rf4]
gi|146396474|gb|ABQ25107.1| import inner membrane translocase, subunit Tim44 [Geobacter
uraniireducens Rf4]
Length = 314
Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 25/222 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F ILL A I ++ + K + + + G +T G
Sbjct: 112 LFEILLLAGI-GYLIYR----------FVKKKREANAAYSSYGGAYQGGTVTPVSGGYLG 160
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
N P + + + + FD F + +++ I ++ + + L
Sbjct: 161 ND-------PQPDDVAAGLAHVRQMDASFDENRFNDLVMDNFFKIQGAWMNRDLTPVTGL 213
Query: 130 VDSRVYQDFNDSLST--RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ + + F + L R +++ + + +++I E +IT I +
Sbjct: 214 LTDEMKRIFQEDLDRLLRDKQVNRLEN--IAVRNVEIAEVWQESGQDFITALIYANLLDY 271
Query: 188 SY-DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ D +++S K + WT R + N W L +
Sbjct: 272 TTDDATGVVVSGSKTEPVKFEEYWTLTRPVG--NNPWRLSAI 311
>gi|268567730|ref|XP_002640066.1| Hypothetical protein CBG12550 [Caenorhabditis briggsae]
gi|187029170|emb|CAP31512.1| hypothetical protein CBG_12550 [Caenorhabditis briggsae AF16]
Length = 425
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EA-----IVDSFFEG 121
+ + I +F +++V+ +I + +FD +++L + E I+++F
Sbjct: 252 RGVTERIGSVFSGQNEVSEVLTEIHKIDANFDKQEWLK-----FCETKIIPNILEAFIRF 306
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ ++ R + + + + S ++ I+ +++ + E + I
Sbjct: 307 DLEVLQSWCHERAFTQLSTVVKEYQKMHWSTKDSRIIDINKVEMATGKMMEQGPVLIISF 366
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLGE 232
I+ + + + ++ DP+ ++ IW R++ NP W L+ + E
Sbjct: 367 QVYMINVTKNAEGKVVEGDPDNPKRINHIWVLCRDVEEYNPAIAWKLLEVHMQE 420
>gi|87122174|ref|ZP_01078057.1| hypothetical protein MED121_05298 [Marinomonas sp. MED121]
gi|86162494|gb|EAQ63776.1| hypothetical protein MED121_05298 [Marinomonas sp. MED121]
Length = 281
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 79/232 (34%), Gaps = 47/232 (20%)
Query: 6 MDSGDFL------ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGI 59
M SG F ILLFA + F+ K+ + + ++
Sbjct: 88 MGSGAFEGFAFGDILLFALV-GFLIY----------------------KFFIAPKRQQAA 124
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ ++ DS + K + + DF+ F+ EA+N Y A+ ++
Sbjct: 125 ANNAQFRQMPGADSFQQAPNASANPFKAQDPAMQLPPDFNQAAFVAEAKNHYTALQKAWD 184
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITI 178
E I V + + R + K+ ++ + D++++ + + IT+
Sbjct: 185 ENDFTEIADYVTPELLAMLQ---AERANYGADKPKTEVISL-DVELVRGEFQGSISSITL 240
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ G K+ E + W +N+ + NW ++ +
Sbjct: 241 KFSGWI------KEG-------EDTSDSTEYWHLEKNMSQQSSNWTIVGIQQ 279
>gi|308499393|ref|XP_003111882.1| hypothetical protein CRE_29458 [Caenorhabditis remanei]
gi|308268363|gb|EFP12316.1| hypothetical protein CRE_29458 [Caenorhabditis remanei]
Length = 425
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EA-----IVDSFFEG 121
+ + I +F +++V+ +I + +FD +++L + E I+++F
Sbjct: 252 RGVTEKIGSVFSGQNEVSEVLTEIHKIDANFDKQEWLR-----FCETKIIPNILEAFIRF 306
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ ++ R + + + + S ++ I+ +++ + E + I
Sbjct: 307 DIEVLQSWCHERAFTQLSTVVKEYQKMHWSTKDSRIIDINKVEMATGKMMEQGPVLIISF 366
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTKLGE 232
I+ + + + ++ DP+ ++ IW R++ NP W L+ + E
Sbjct: 367 QVYMINVTKNAEGKVVEGDPDNPKRINHIWVLCRDVEEYNPATAWKLLEVHMQE 420
>gi|149015618|gb|EDL74999.1| translocator of inner mitochondrial membrane 44, isoform CRA_b
[Rattus norvegicus]
Length = 453
Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 66/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 268 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDRFLHQCETDIIPN 327
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y S+ K+ S ++ I ++ + + E
Sbjct: 328 ILEAMISGELDILKDWCYEATYNQLAHSIQQAKALGLQFHSRILDISNVDLAMGKMMEQG 387
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + Q + + + DP+ +++ +W R+ NP W L
Sbjct: 388 PVLIVTFQAQLVMVIKNPKGEVFDGDPDKVLRMLYVWALCRDQEELNPYAAWRL 441
>gi|8394449|ref|NP_058963.1| mitochondrial import inner membrane translocase subunit TIM44
precursor [Rattus norvegicus]
gi|6016370|sp|O35094|TIM44_RAT RecName: Full=Mitochondrial import inner membrane translocase
subunit TIM44; Flags: Precursor
gi|2335041|dbj|BAA21820.1| Tim44 [Rattus norvegicus]
Length = 453
Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 66/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 268 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDRFLHQCETDIIPN 327
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y S+ K+ S ++ I ++ + + E
Sbjct: 328 ILEAMISGELDILKDWCYEATYNQLAHSIQQAKALGLQFHSRILDISNVDLAMGKMMEQG 387
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + Q + + + DP+ +++ +W R+ NP W L
Sbjct: 388 PVLIVTFQAQLVMVIKNPKGEVFDGDPDKVLRMLYVWALCRDQEELNPYAAWRL 441
>gi|255081604|ref|XP_002508024.1| mitochondrial protein translocase family [Micromonas sp. RCC299]
gi|226523300|gb|ACO69282.1| mitochondrial protein translocase family [Micromonas sp. RCC299]
Length = 341
Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 9/141 (6%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEK-NVKS 154
F +F EA Y I E V ++ LV + D TR+ +
Sbjct: 176 KGFTRDNFKAEAGQLYRQISQLIAENHVTSLRHLVTEKALTDIKREAKTREKAGWGKIVW 235
Query: 155 SLVGIDDMKIINASI--------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ ++ + + + +T+ A+YD L++ DP F V
Sbjct: 236 EIRDLEKPVTLQGRMIFPNPQDKQMAFAQMTVGFRSHQRYAAYDAKGRLVAGDPNGFLPV 295
Query: 207 IDIWTFVRNIPPSNPNWVLIS 227
D+W N W L +
Sbjct: 296 EDVWVLEHAFKLPNARWRLAA 316
>gi|303284301|ref|XP_003061441.1| mitochondrial protein translocase family [Micromonas pusilla
CCMP1545]
gi|226456771|gb|EEH54071.1| mitochondrial protein translocase family [Micromonas pusilla
CCMP1545]
Length = 289
Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 13/209 (6%)
Query: 27 LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK 86
L V K G ++ + + + R+ T DS++ F T +
Sbjct: 71 LTSVFSKLQGLKRTPAYQKTEDALEDLRERW--ETSENPMVHKIQDSVDGFFQE-TEQGE 127
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL-VDSRVYQDFNDSLSTR 145
R I + F+ DFL E R I+ ++ +G V A+ V + + + + +
Sbjct: 128 AYRAIRARAPTFNINDFLAEVRRDVPKILGAYLKGDVDALAMTNVSNEMMERMSGQMRAW 187
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
++ +K V ++ + D++++ + E + + Q I+ D +++ +
Sbjct: 188 EAEQKFVDPRVLHLGDVELVETRMMEGAPLVVTQFQCQQINCVRDASGVIVEGAEDDIQA 247
Query: 206 VIDIWTFV---RNIPPSN------PNWVL 225
V +W + + ++ P WVL
Sbjct: 248 VHYLWAMQLVDKELVAADGRKYVAPTWVL 276
>gi|281349988|gb|EFB25572.1| hypothetical protein PANDA_010903 [Ailuropoda melanoleuca]
Length = 405
Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD + FL + N + I +++ G++ ++ Y
Sbjct: 247 TEMSEVLTEILRVDPAFDKERFLQQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 304
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ ++ S ++ ID++ + + E + I Q + + ++
Sbjct: 305 AHPIQQARALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEG 364
Query: 199 DPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
DP+ +++ +W R+ NP W L
Sbjct: 365 DPDKVLRMLYVWALCRDQDELNPYAAWRL 393
>gi|332264171|ref|XP_003281120.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44 [Nomascus leucogenys]
Length = 455
Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 9/180 (5%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ I + D + E T +++V+ +I+ V FD FL + N +
Sbjct: 266 DESDNAFIRASRALTDKVTDLLGEGSVSKTEMSEVLTEILRVDPAFDKDRFLKQCEN--D 323
Query: 113 AI-----VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
I V + G + + + Y + K+ S ++ ID++ +
Sbjct: 324 IIPNVLEVGAAPPGPLPGSRSWLHQQTYSQLAHPIQQAKALGLQFHSRILDIDNVDLAMG 383
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ E + I Q + + ++ DP+ +++ +W R+ NP W L
Sbjct: 384 KMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRL 443
>gi|126323825|ref|XP_001376780.1| PREDICTED: similar to Translocase of inner mitochondrial membrane
44 homolog (yeast) [Monodelphis domestica]
Length = 443
Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 8/178 (4%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ +I + + D + LF T +++V+ +I+ V FD FL + +
Sbjct: 257 DESDNTLIRVSRAVTDKITDLVGGLFSK-TEMSEVLTEILKVDPTFDKDRFLQQCER--D 313
Query: 113 AI---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
I +++ G++ ++ Y + KS S ++ I ++ + +
Sbjct: 314 IIPNVLEAMITGELDILKDWCYEATYSQLAHPIHQAKSMGLQFHSRILDISNVDLAMGKM 373
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
E + I Q + + ++ DP+ +++ +W R+ NP W L
Sbjct: 374 MEQGPVLIITFQAQLVMVIKNPKGDVVEGDPDKVLRMLYVWALCRDQTELNPYAAWRL 431
>gi|145352217|ref|XP_001420450.1| MPT family transporter: inner membrane translocase (import) Tim44
[Ostreococcus lucimarinus CCE9901]
gi|144580684|gb|ABO98743.1| MPT family transporter: inner membrane translocase (import) Tim44
[Ostreococcus lucimarinus CCE9901]
Length = 286
Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 75/211 (35%), Gaps = 13/211 (6%)
Query: 28 RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFP---IGTRL 84
+ LG + +K + Y + + + I + T
Sbjct: 63 KSKLGIASAFDKLEGLKKTAPYAKGAELAEDMRERWETSDSPVVHRIQDFQDNLFSETEQ 122
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL-VDSRVYQDFNDSLS 143
+ R I F+ DF+ E R ++ ++ +G V A+++ + S + + + ++
Sbjct: 123 GEAYRMIRQRDPMFNINDFIAEVRRDIPKVLGAYLKGDVEALKQTNISSEMLERLSGQMN 182
Query: 144 TRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
K ++V ++ + +++++ + EN + + Q I+ DK ++ +
Sbjct: 183 LWKHEGQHVDPRILDLSEVELMEVRLMENEPLVVLTFSCQQINCVRDKSGAVVEGAEDDI 242
Query: 204 GKVIDIWTFV---RNIPPSN------PNWVL 225
V +W + + P W L
Sbjct: 243 QSVHYLWAMQLVDKEYTTKDGRKYTKPTWAL 273
>gi|291411565|ref|XP_002722049.1| PREDICTED: translocase of inner mitochondrial membrane 44
[Oryctolagus cuniculus]
Length = 452
Score = 78.8 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T +++V+ +I+ V FD FL + + I+++ G++ ++ Y
Sbjct: 294 TEMSEVLTEILRVDPAFDKDRFLQQCENDIIPNILEAMISGELDILKDWCYEATYSQLAH 353
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ K+ S ++ +D++ + + E + I Q + + ++ DP
Sbjct: 354 PIQQAKALGFQFHSRILDVDNVDLAMGKMMEQGPVLIITFQAQLVMVIKNPKGEVVEGDP 413
Query: 201 EIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ +++ +W R+ NP W L
Sbjct: 414 DKVLRMLYVWALCRDQDELNPYAAWRL 440
>gi|297827085|ref|XP_002881425.1| attim44-2 [Arabidopsis lyrata subsp. lyrata]
gi|297327264|gb|EFH57684.1| attim44-2 [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 78.4 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 3/175 (1%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVY 95
K SG S+ ++ + + I ++ T ++I
Sbjct: 262 KRLSGMSEPVVNKSQEIAEDVMEKWETSDNPIVHKIQDMNEKIFEETGSASTYKEIRRRD 321
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F DF E + + +++++ +G ++K + + +S+
Sbjct: 322 PSFSLPDFAVEIQEAIRPVLNAYSKGDAETLKKYCSKELIERCTAEHRAFQSHGYFFDHK 381
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
L+ + +++I + + I +R Q I D++ + + V W
Sbjct: 382 LLHVSEVEIKETKMMGTSPVIIVRFQTQEIFCVRDQNGNIKEGGQDTIHTVYYDW 436
>gi|168047419|ref|XP_001776168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672543|gb|EDQ59079.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 354
Score = 78.4 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 46/129 (35%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T MR+I F DFL E + + ++ +G + K V +
Sbjct: 193 TATAVAMREIRRHDPSFTFSDFLAEVQEEIRPTLRAYLKGDFATLRKKCSREVVERCQAE 252
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+S + + ++ I D++I + N I I Q I + +KD +I +
Sbjct: 253 RRALESQGIFLDNEILHISDVEIKETKLLGNAPIIIINFQTQQIHCARNKDGNIIEGARD 312
Query: 202 IFGKVIDIW 210
V W
Sbjct: 313 DIHTVFYAW 321
>gi|256083399|ref|XP_002577932.1| mitochondrial import inner membrane translocase subunit tim44
[Schistosoma mansoni]
gi|238663274|emb|CAZ34170.1| mitochondrial import inner membrane translocase subunit tim44,
putative [Schistosoma mansoni]
Length = 407
Score = 78.4 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 7/147 (4%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDFN 139
L +V+ +I+ + F+ + F+ R + I +++ G + + Y
Sbjct: 250 DLQQVLDEIIKMDPSFNLESFIRYCR--FVVIPNVLEAIVRGDLRILHDWCHEVPYNVLA 307
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
L K +S ++ + ++ + + E + I Q I+ DK+ L D
Sbjct: 308 TPLKQMKELGYISESRILDVHNVDVQMGKMMEQGPVLIITFQAQQINCIRDKNGNLHEGD 367
Query: 200 PEIFGKVIDIWTFVRNIPPSNP--NWV 224
P +V ++W R+ NP W
Sbjct: 368 PNKVLRVTNVWALCRDQSEMNPLAAWR 394
>gi|148224361|ref|NP_001087692.1| translocase of inner mitochondrial membrane 44 [Xenopus laevis]
gi|51703695|gb|AAH81090.1| MGC82677 protein [Xenopus laevis]
Length = 451
Score = 78.4 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLN-EARNSY 111
+ + + D I LF T +++V+ +I+ V +FD FL R+
Sbjct: 265 DESDNAFVRASRTITDKVSDLIGGLFSK-TEMSEVLTEILKVDPNFDKDKFLKLCERDII 323
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
I+++ G + ++ Y + KS S ++ ID++ + + E
Sbjct: 324 PNILEAMIRGDLDVLKDWCYEATYSQLAHPIQQAKSMGLQFNSRILDIDNIDLAMGKMME 383
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ I Q + A ++ ++ D + +++ +W R+ NP W L
Sbjct: 384 QGPVLIITFQAQLVMAITNQRGDIVEGDQDKVLRMLYVWALCRDQDELNPYAAWRL 439
>gi|301093253|ref|XP_002997475.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora
infestans T30-4]
gi|262110731|gb|EEY68783.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora
infestans T30-4]
Length = 467
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV-----DSFFEGKVHAIEKLVDSRVYQ 136
T + +++I DF L E + + E +V ++F G ++K Y
Sbjct: 308 TPMAVAIKEIRRAEPDF----ILEEWKENIEEVVLPGVLEAFLRGNSRDLKKWFGEAAYS 363
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI-RIVGQFISASYDKDNLL 195
N ++ RKS + ++ ID++++I A+ E+ I + R Q I+ +++ +
Sbjct: 364 RMNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEV 423
Query: 196 ISSDPEIFGKVIDIWTFVRN 215
+ + I+ F R+
Sbjct: 424 VEGSEDEVLAYYYIFAFQRD 443
>gi|308807262|ref|XP_003080942.1| Putative mitochondrial/chloroplast ribosomal protein L45 (ISS)
[Ostreococcus tauri]
gi|116059403|emb|CAL55110.1| Putative mitochondrial/chloroplast ribosomal protein L45 (ISS)
[Ostreococcus tauri]
Length = 285
Score = 78.0 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 63/213 (29%), Gaps = 20/213 (9%)
Query: 32 GKKTGN--EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMR 89
G ++G + S + Y R + L + + + +
Sbjct: 56 GARSGIRLNRTSSNVIAEPYAGPLRRPTIVQAL---TTSLGWRYVVDSALGKAKDAYALS 112
Query: 90 DIVSVYTDFDPKDFLNEARNSYEAIV--DSFFEGKV---HAIEKLVDSRVYQDFNDSLST 144
F F EA+ Y I + G H ++ D
Sbjct: 113 KCTKEIKGFTLDGFKAEAKQLYRMINATSASTSGTRALSHETRHATTDKMQSDLKRERKA 172
Query: 145 RKSNEK-NVKSSLVGIDDMKIINASIE---------ENTVYITIRIVGQFISASYDKDNL 194
R+ + SL I++ +++ + V +T R + A+YD
Sbjct: 173 RELGGWGAIDWSLEDIEECQVVRGRLIMANPNDTSGAGFVQLTTRFRSRQRFAAYDGKGR 232
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
L+S DP+ V D W F + N W L
Sbjct: 233 LVSGDPDEVLDVEDFWVFEHGLKIPNSRWRLAG 265
>gi|168020464|ref|XP_001762763.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686171|gb|EDQ72562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 49/129 (37%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T MR+I F DFL E + + ++ +G V ++K V +
Sbjct: 267 TATAVAMREIRRHDPSFTFSDFLAEMQEEIRPTLRAYLKGDVPTLKKKCCREVLERCQAE 326
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
S +S + + ++ I D++I + N+ I I Q I + DK +I +
Sbjct: 327 RSALESQGIFLSNEILHISDIEIKETKLLGNSPIIIINFQTQQIHCARDKAGNIIEGARD 386
Query: 202 IFGKVIDIW 210
V W
Sbjct: 387 DIHTVFYAW 395
>gi|187608373|ref|NP_001120395.1| translocase of inner mitochondrial membrane 44 [Xenopus (Silurana)
tropicalis]
gi|170284954|gb|AAI61105.1| LOC100145471 protein [Xenopus (Silurana) tropicalis]
Length = 441
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 67/176 (38%), Gaps = 4/176 (2%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLN-EARNSY 111
+ + + D I LF T +++V+ +I+ V +FD FL R+
Sbjct: 255 DESDNAFVRASRTITDKVSDLIGGLFSK-TEMSEVLTEILKVDPNFDKDKFLKLCERDII 313
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
I+++ G + ++ Y + K+ S ++ ID++ + + E
Sbjct: 314 PNILEAMIRGDLDVLKDWCYEATYSQLAHPIQQAKAMGLQFNSKILDIDNIDLAMGKMME 373
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ I Q + ++ ++ D + +++ +W R+ NP W L
Sbjct: 374 QGPVLIITFQAQLVMVITNQKGDVVEGDRDKVLRMLYVWALCRDQDELNPYAAWRL 429
>gi|168056436|ref|XP_001780226.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668376|gb|EDQ54985.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI---------DDMK 163
I ++ G A+ +LV V L R+ V LVG +
Sbjct: 229 MINNALAAGDRTALRQLVTDNVLTAMKKELKHRELAWARVHWELVGPLKSIRTLQGRLIG 288
Query: 164 IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
I +++ +T+RIV A+YDK L++ DPE +
Sbjct: 289 IDQKNMDTAFAQLTLRIVSTQRFAAYDKQGKLVAGDPEKEVE 330
>gi|78484559|ref|YP_390484.1| import inner membrane translocase, subunit Tim44 [Thiomicrospira
crunogena XCL-2]
gi|78362845|gb|ABB40810.1| Hypothetical protein; predicted membrane protein [Thiomicrospira
crunogena XCL-2]
Length = 306
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 16/222 (7%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
+L I FL L L K+ + + R T +
Sbjct: 100 IQLLDILLIALVAFL-LFSFLKKRQATMMQPAYSRESSPSSFEAASRQTTTQMRENHAPT 158
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
D IG+ L++ + FD F+ A+ + I ++ +
Sbjct: 159 YDPYASGSLIGSGLSEQAESMTQKPDWFDEAGFMEAAKGHFVEIQKAWDALDSQELADYC 218
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ + T ++ E + + + + +I+ + +++R
Sbjct: 219 TPELMAALQSEMDTFQAGENLTEVEELN---AETVEMAIDGDYFIVSVRF---------- 265
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + ++ +IW +R + NW + + +
Sbjct: 266 -NGFIREDRNDVAHAFNEIWH-IRRLAAGEGNWQIAGIQQNQ 305
>gi|224123246|ref|XP_002319031.1| predicted protein [Populus trichocarpa]
gi|222857407|gb|EEE94954.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 18/161 (11%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
L + T + F EA Y+ I G A+ K V ++Y + + +
Sbjct: 71 ELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEKMYSELKNEI 130
Query: 143 STRKSNE----------------KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
R+S + +++ L ++ + + + + + +T+ I +
Sbjct: 131 KQRQSAWNMSKLYWEMIEPAVLIRTLRARLA--TEIGVDKSDLNKVFIQLTLEIKTKQKF 188
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+YD ++ D V +IW F +++ W L
Sbjct: 189 EAYDSKGARVAGDKNKEILVREIWVFEKSLFHPGAYWRLCG 229
>gi|19483882|gb|AAH23454.1| Timm44 protein [Mus musculus]
Length = 450
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 65/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 265 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDHFLHQCETDIIPN 324
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y + K+ S ++ I ++ + + E
Sbjct: 325 ILEAMISGELDILKDWCYEATYSQLAHPIQQAKALGFQFHSRILDISNVDLAMGKMMEQG 384
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + Q + + + DP+ +++ +W R+ NP W L
Sbjct: 385 PVLIVTFQAQVVMVIKNSKGEVYDGDPDKVQRMLYVWALCRDQEELNPYAAWRL 438
>gi|170763467|ref|NP_035722.2| mitochondrial import inner membrane translocase subunit TIM44
precursor [Mus musculus]
gi|84570125|gb|AAI10678.1| Timm44 protein [Mus musculus]
gi|109730975|gb|AAI17524.1| Translocase of inner mitochondrial membrane 44 [Mus musculus]
gi|109731467|gb|AAI17525.1| Translocase of inner mitochondrial membrane 44 [Mus musculus]
gi|148690045|gb|EDL21992.1| translocase of inner mitochondrial membrane 44, isoform CRA_a [Mus
musculus]
Length = 452
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 65/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 267 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDHFLHQCETDIIPN 326
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y + K+ S ++ I ++ + + E
Sbjct: 327 ILEAMISGELDILKDWCYEATYSQLAHPIQQAKALGFQFHSRILDISNVDLAMGKMMEQG 386
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + Q + + + DP+ +++ +W R+ NP W L
Sbjct: 387 PVLIVTFQAQVVMVIKNSKGEVYDGDPDKVQRMLYVWALCRDQEELNPYAAWRL 440
>gi|6016369|sp|O35857|TIM44_MOUSE RecName: Full=Mitochondrial import inner membrane translocase
subunit TIM44; Flags: Precursor
gi|2351410|gb|AAB97624.1| translocase of inner mitochondrial membrane [Mus musculus]
Length = 452
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 65/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 267 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDHFLHQCETDIIPN 326
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y + K+ S ++ I ++ + + E
Sbjct: 327 ILEAMISGELDILKDWCYEATYSQLAHPIQQAKALGFQFHSRILDISNVDLAMGKMMEQG 386
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + Q + + + DP+ +++ +W R+ NP W L
Sbjct: 387 PVLIVTFQAQVVMVIKNSKGEVYDGDPDKVQRMLYVWALCRDQEELNPYAAWRL 440
>gi|225848621|ref|YP_002728784.1| hypothetical protein SULAZ_0804 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643113|gb|ACN98163.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 293
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK 163
LN A+N++ I ++ EG + ++ + R+Y N L KS V I + +
Sbjct: 167 LNLAKNAFIDIQKAWSEGNLSSVRNFLTDRMYLYLNSQLQDLKSKGLRNIIEDVKILNAE 226
Query: 164 IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV-RNIPPSNPN 222
I++ E + + + I Q + D + ++ D + + W FV + + N
Sbjct: 227 IVHVEEEGDNKVVIVEIEAQAKDYTVDSNGNVVEGDKDNPVVFKEYWAFVGKAL-----N 281
Query: 223 WVLISTKLGE 232
W L + +
Sbjct: 282 WKLDDIRQVQ 291
>gi|297836804|ref|XP_002886284.1| mitochondrial import inner membrane translocase subunit TIM44
[Arabidopsis lyrata subsp. lyrata]
gi|297332124|gb|EFH62543.1| mitochondrial import inner membrane translocase subunit TIM44
[Arabidopsis lyrata subsp. lyrata]
Length = 477
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 60/170 (35%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDP 100
S K D R I + +NE+F T ++I + F
Sbjct: 275 MSEPVVNKSQEIAEDVREIWETSDNPIVHKIQDMNEMFLKETDSASTYKEIRNRDPSFSL 334
Query: 101 KDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGID 160
DF E +++++ EG V ++K V + L+ +++ + L+ I
Sbjct: 335 PDFAAEIEEVIRPVLNAYSEGDVETLKKYCSKEVIERCTAELTAYQTHGFFFDNKLLHIS 394
Query: 161 DMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
D+++ + ++ I + Q I D++ + + V W
Sbjct: 395 DVRVSVTKMMGDSPIIIAKFQTQEIYCVRDENGEIQEGGQDTIHTVYHEW 444
>gi|325191254|emb|CCA26040.1| Mitochondrial Protein Translocase (MPT) Family puta [Albugo
laibachii Nc14]
Length = 409
Score = 76.5 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 82 TRLNKVMRDIVSVYTDF-------DPKDF-LNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
T + +R+I +F D +F L ++D+F +G+ ++K
Sbjct: 250 TSMGIAIREIRRAEPEFILEQWKEDIAEFVLPG-------VLDAFLKGRSRDLKKWFGEA 302
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV-YITIRIVGQFISASYDKD 192
Y N ++ RKS + +++ ID++ +I AS E+ I +R Q I+ +++
Sbjct: 303 AYNRINIAIRERKSEGLVMDPNVLEIDNVDVIEASAEDKQAPIILVRFRSQQINCIRNRE 362
Query: 193 NLLISSDPEIFGKVIDIWTFVR--NIPPSNPNWVLI 226
++ + I+ F R + W ++
Sbjct: 363 GEIVEGAEDEVLAYYYIFAFQREYDESTERLRWRIV 398
>gi|242279221|ref|YP_002991350.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
salexigens DSM 2638]
gi|242122115|gb|ACS79811.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
salexigens DSM 2638]
Length = 312
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 23/230 (10%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGK----KTGNEKPFSGFFSGKYVFSKRDERGIITL 62
+ +L++ F F + R G + GN + + + D
Sbjct: 101 NLLIIGLLVYLG---FKFFKSRS-RGTDDMYRQGNYQRGPDYSQPNQNNTNADPYARREQ 156
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
D+L S P + V++ FD ++FL+ A+ Y + S+
Sbjct: 157 TAQNAWDHLSSKPSSQPAAGSAAQQSGPTVNIPAGFDEEEFLDGAKAVYTRLQKSWDSRD 216
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ IE+ + V + + + + + V + + +++ E ++T+
Sbjct: 217 MADIEQFATAGV----VNEIKQQAKEDPGPSQTDVLMVNARLLEVKEEGGVNHVTVYYDV 272
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
S +V ++W FV+ + + W L + E
Sbjct: 273 LLRE----------DSSQSQPSQVREVWHFVKPVGS-DGMWKLDGIQQLE 311
>gi|225438141|ref|XP_002278528.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 485
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 44/129 (34%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T ++I F DF++E + +++++ +G ++K V +
Sbjct: 324 TAAAMSFKEIRRRDPSFSLPDFVSEVQEVIRPVLNAYIKGDAETLKKYCSPEVIERCKAE 383
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
++ + ++ I D+++ + + I + Q + D + +
Sbjct: 384 HGAYQTMGIIFDNKILHISDVEVRETKMMGTSPIIIVAFQTQQVYCVRSADGSIKEGGKD 443
Query: 202 IFGKVIDIW 210
V W
Sbjct: 444 TIHTVYYAW 452
>gi|87311137|ref|ZP_01093261.1| hypothetical protein DSM3645_18996 [Blastopirellula marina DSM
3645]
gi|87286228|gb|EAQ78138.1| hypothetical protein DSM3645_18996 [Blastopirellula marina DSM
3645]
Length = 707
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
++ + + FD F A N++ I ++ + + +I V VY+ F+ +S
Sbjct: 114 IDSCLEALKESDPSFDLPQFKQRAENAFGKIQRAWSDQDLASIHAFVSDGVYERFSLQIS 173
Query: 144 TRKSNEKNVKSSLVGIDDMKIIN--ASIEENTVY--ITIRIVGQFISASYDK-DNLLISS 198
+ V I M+ I AS + + I++R+ + D+ LI
Sbjct: 174 EQHELGYRNVIEDVRILKMEPIEIIASRNDQNAFEVISLRVQARGKDYRVDRTTGKLIPG 233
Query: 199 DPEIFGKVIDIWTFVRNIPP 218
++WTF+R
Sbjct: 234 SKSN-ESFSEVWTFLRRRGA 252
>gi|297744147|emb|CBI37117.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 44/129 (34%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T ++I F DF++E + +++++ +G ++K V +
Sbjct: 323 TAAAMSFKEIRRRDPSFSLPDFVSEVQEVIRPVLNAYIKGDAETLKKYCSPEVIERCKAE 382
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
++ + ++ I D+++ + + I + Q + D + +
Sbjct: 383 HGAYQTMGIIFDNKILHISDVEVRETKMMGTSPIIIVAFQTQQVYCVRSADGSIKEGGKD 442
Query: 202 IFGKVIDIW 210
V W
Sbjct: 443 TIHTVYYAW 451
>gi|148690048|gb|EDL21995.1| translocase of inner mitochondrial membrane 44, isoform CRA_d [Mus
musculus]
Length = 321
Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 65/174 (37%), Gaps = 3/174 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 136 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDHFLHQCETDIIPN 195
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y + K+ S ++ I ++ + + E
Sbjct: 196 ILEAMISGELDILKDWCYEATYSQLAHPIQQAKALGFQFHSRILDISNVDLAMGKMMEQG 255
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + Q + + + DP+ +++ +W R+ NP W L
Sbjct: 256 PVLIVTFQAQVVMVIKNSKGEVYDGDPDKVQRMLYVWALCRDQEELNPYAAWRL 309
>gi|73540138|ref|YP_294658.1| import inner membrane translocase, subunit Tim44 [Ralstonia
eutropha JMP134]
gi|72117551|gb|AAZ59814.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Ralstonia eutropha JMP134]
Length = 327
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 16/224 (7%)
Query: 8 SGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSK-RDERGIITLGKGK 66
S ++L A + F +R G N++P + + +
Sbjct: 117 SFLSNLILIALVAFVAIWLIRKFRGGSQRNQQPAYAGAGNAGGMGDLGNSAEPMLREQTP 176
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ + + V DFD + FL A+ + + ++ G + I
Sbjct: 177 SPAASNPVMPAAGAAAVAADAAQQPWGVPADFDTEAFLRNAKVHFVRLQAAWDAGNLDDI 236
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ ++ + L+ R + + K+ +V + + +++ N ++R G
Sbjct: 237 REFTTPEMFAEIKMDLAERGA--EVNKTDVVTL-EAQLLGIESAPNQHLASVRFSG---- 289
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ E ++W + + W+L +
Sbjct: 290 MIRERTG-------EAAQPFAEVWNLAKPV-SGTGGWLLAGIQQ 325
>gi|302790822|ref|XP_002977178.1| hypothetical protein SELMODRAFT_176052 [Selaginella moellendorffii]
gi|300155154|gb|EFJ21787.1| hypothetical protein SELMODRAFT_176052 [Selaginella moellendorffii]
Length = 432
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 6/150 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T ++I S F DF+ E + I+ ++ +G + K V V +
Sbjct: 271 TATAAAFKEIRSRDPTFSFPDFVLEVQEDIRPILTAYLKGDYDTLRKKVCKEVVERCRAE 330
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+S V + ++ I ++++ + + N I I Q D+ + +
Sbjct: 331 HRALQSQGLYVDTKILYISELEVRESKLIGNEPVIIISFQTQQNYCVRDEFGHIREGSKD 390
Query: 202 IFGKVIDIWTF------VRNIPPSNPNWVL 225
++ W + P W L
Sbjct: 391 DIRTILYAWAMQQVSLDEMDPDEFTPRWRL 420
>gi|296532615|ref|ZP_06895317.1| import inner membrane translocase, subunit Tim44 [Roseomonas
cervicalis ATCC 49957]
gi|296267060|gb|EFH12983.1| import inner membrane translocase, subunit Tim44 [Roseomonas
cervicalis ATCC 49957]
Length = 243
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 11/129 (8%)
Query: 109 NSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++EA I ++ + +L + F L + ++S V ++ +
Sbjct: 119 QAFEALLRDINAAWSRRDEAGLARLATPEMASYFAQDLRDLDARGWRNETSDVRLEQGDL 178
Query: 165 INA--SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN 222
A + + + +R + +YD ++ DP ++WTF R
Sbjct: 179 SEAWREADGDYATVAMRFS--LVDVTYDTQGRVVEGDPATRSTATELWTFRRRRGGP--- 233
Query: 223 WVLISTKLG 231
W L + +
Sbjct: 234 WQLSAIQQA 242
>gi|316968065|gb|EFV52405.1| conserved hypothetical protein [Trichinella spiralis]
Length = 468
Score = 74.9 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 4/165 (2%)
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
GK + D++ + F +++V+ +I + +FD DF + + + I ++ G+
Sbjct: 295 GGKLSEFFDNLLDAFLDNCSVSEVLTEICKIDPNFDVTDFRKQCQRDF--IPNASNRGEE 352
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
+ + LS K L ID+++II I + + + +
Sbjct: 353 EILRDWCSEGAFNQLIALLSECKRAGYKHTFRLFDIDNVEIITGKITDMGPVLLVAFQTR 412
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN--PNWVLI 226
+ D + + + +W F R++ N W ++
Sbjct: 413 QLRCIQTPDGKFVFGTTDDPLLITHLWAFCRDVDEPNSKAAWRVV 457
>gi|153829224|ref|ZP_01981891.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148875262|gb|EDL73397.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 95
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
++ I + V +++D L ++N + + + V D +I+ A + N ++++
Sbjct: 1 NQLETIREYVSPSLFED----LKAERANYEGDQHTDVMYVDAEIVRADYDANRAQLSLQF 56
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G++ A I + + D+W R++ N W+++ +
Sbjct: 57 SGRYRDAV-----EGIEEN------IEDVWHLERDLTVPNAPWLIVGIQ 94
>gi|298715200|emb|CBJ27872.1| Import inner membrane translocase subunit TIM44, mitochondrial
precursor [Ectocarpus siliculosus]
Length = 602
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 53/156 (33%), Gaps = 5/156 (3%)
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRV 134
+ + +R++ + F +D+ + + + + +F G V +++
Sbjct: 436 DSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLRGDVKLLKQWTGEAC 495
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVY--ITIRIVGQFISASYDKD 192
Y RK++ + ++ I +++ + I ++ + Q I+ +K
Sbjct: 496 YNKLASEAKQRKADGMVLDPHVLDIRQGEVLAIKADAGKANPTIALQFMCQQINCVRNKK 555
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLI 226
++ + I F R W ++
Sbjct: 556 GEILEGAEDDIRATYYILAFQREFNDDEAELRWRVV 591
>gi|186475144|ref|YP_001856614.1| import inner membrane translocase subunit Tim44 [Burkholderia
phymatum STM815]
gi|184191603|gb|ACC69568.1| import inner membrane translocase subunit Tim44 [Burkholderia
phymatum STM815]
Length = 331
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 78/230 (33%), Gaps = 27/230 (11%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L AF+ ++ R +G+K + P S G
Sbjct: 125 FAGMMANMIVIALIAFVAIWLI---RKFVGRKRNAQTPAYAGGSPTL------NAGGTGY 175
Query: 63 GKGKKKDNLDSINELFPIGTRLNKV-MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ + + + L P G L + +V FD + FL A+ + + ++ G
Sbjct: 176 SQEPRYTAPPTGSYLGPQGNPLTTPDIAATPAVPAGFDSEAFLRNAKVYFVRLQAAWDAG 235
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ I + ++ + LS+R + + ++ +V + D ++ + ++R
Sbjct: 236 NMDDIREFTTPEMFAEVRVDLSSRGA--EKNQTDVVKL-DADLLGVEDRGSEYLASVRFH 292
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
G + E +IW + W+L +
Sbjct: 293 GLIR--------ETVGGSAE---PFEEIWNLSKRTGEG---WLLAGIQQA 328
>gi|260361390|ref|ZP_05774455.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|308111106|gb|EFO48646.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 229
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 12/122 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG--NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
IL+ I F +F +RG+LG K G N++ F G ++
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNASKFEQPNMQNFEQQPNTNAGG 155
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FTGFGAQTDVPHNYP----------PGFDQAAFINGSREHYRILQGAWNHNQLDTIEEYV 205
Query: 131 DS 132
Sbjct: 206 SP 207
>gi|303278680|ref|XP_003058633.1| mitochondrial protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459793|gb|EEH57088.1| mitochondrial protein translocase family [Micromonas pusilla
CCMP1545]
Length = 335
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 49/145 (33%), Gaps = 13/145 (8%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNE-KNVKS 154
F + FL+ A+ Y + + G + L R V+
Sbjct: 159 QAFTKEGFLDTAKEVYAEVNELIARGDHAKLRHLCSGSAASHVKREDKARSQGGWDRVEW 218
Query: 155 SLV-GIDDMKIINASI-----EENT--VYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
L+ + +++ A + + T++ + A+YDK L++ DPE V
Sbjct: 219 KLLEHVQTPRVLQARLCSPAGDPAVSWAQFTVQFKTRETFAAYDKRGNLVAGDPEEVLVV 278
Query: 207 IDIWTFVRNIPPS----NPNWVLIS 227
D W + S N W L +
Sbjct: 279 EDAWVLEHGVGESNSKKNARWRLAA 303
>gi|91806216|gb|ABE65836.1| mitochondrial import inner membrane translocase subunit TIM44
[Arabidopsis thaliana]
Length = 474
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 11/188 (5%)
Query: 23 VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGT 82
VF +L +G +P K D R I + +NE F T
Sbjct: 265 VFKRL-------SGMSEPVVN----KSQEIAEDVREIWETSDNPIVHKIQDMNEKFLKET 313
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
++I S F DF E + +++++ EG V ++K V +
Sbjct: 314 DSASTYKEIRSRDPSFSLPDFAAEIEEVIKPVLNAYSEGDVETLKKYCSKEVIERCTAER 373
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI 202
+ +++ + L+ I ++ + + ++ I + Q I D++ + +
Sbjct: 374 TAYQTHGVLFDNKLLHISEVSVSVTKMMGDSPIIIAKFQTQEIYCVRDENGEIQEGGQDT 433
Query: 203 FGKVIDIW 210
V W
Sbjct: 434 IHTVYHEW 441
>gi|18399377|ref|NP_565473.1| ATTIM44-1; protein-transmembrane transporting ATPase [Arabidopsis
thaliana]
gi|20198086|gb|AAD25651.2| putative mitochondrial inner membrane translocating protein
[Arabidopsis thaliana]
gi|330251926|gb|AEC07020.1| translocase inner membrane subunit 44-1 [Arabidopsis thaliana]
Length = 472
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 11/188 (5%)
Query: 23 VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGT 82
VF +L +G +P K D R I + +NE F T
Sbjct: 263 VFKRL-------SGMSEPVVN----KSQEIAEDVREIWETSDNPIVHKIQDMNEKFLKET 311
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
++I S F DF E + +++++ EG V ++K V +
Sbjct: 312 DSASTYKEIRSRDPSFSLPDFAAEIEEVIKPVLNAYSEGDVETLKKYCSKEVIERCTAER 371
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI 202
+ +++ + L+ I ++ + + ++ I + Q I D++ + +
Sbjct: 372 TAYQTHGVLFDNKLLHISEVSVSVTKMMGDSPIIIAKFQTQEIYCVRDENGEIQEGGQDT 431
Query: 203 FGKVIDIW 210
V W
Sbjct: 432 IHTVYHEW 439
>gi|316958066|gb|EFV47264.1| conserved hypothetical protein [Trichinella spiralis]
Length = 168
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 55/147 (37%), Gaps = 3/147 (2%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+++V+ +I + +FD DF + + + ++++ G+ + +
Sbjct: 11 SVSEVLTEICKIDPNFDVTDFRKQCQRDFIPNVIEASNRGEEEILRDWCSEGAFNQLIAL 70
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
LS K L ID+++II I + + + + + D + +
Sbjct: 71 LSECKRAGYKHTFRLFDIDNVEIITGKITDMGPVLLVAFQTRQLRCIQTPDGKFVFGTTD 130
Query: 202 IFGKVIDIWTFVRNIPPSN--PNWVLI 226
+ +W F R++ N W ++
Sbjct: 131 DPLLITHLWAFCRDVDEPNSKAAWRVV 157
>gi|307822898|ref|ZP_07653128.1| import inner membrane translocase subunit Tim44 [Methylobacter
tundripaludum SV96]
gi|307735673|gb|EFO06520.1| import inner membrane translocase subunit Tim44 [Methylobacter
tundripaludum SV96]
Length = 319
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 68/228 (29%), Gaps = 28/228 (12%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
L+F I F+ + KK G + + + D+
Sbjct: 110 LIFGGIA-FLLYKWFAA--KKAGAAQRPVYNRTADNSYQDTASSDHEPEPTQANPAGFDT 166
Query: 74 INELFPIGTRLNKVMRDIVSVY---------TDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+ LF V DFD + FL+ A+ ++ + ++ E +
Sbjct: 167 -DILFKKDNNATPSYAQPVQQDAGFASAVVPKDFDQQAFLSGAKIAFTELQKAWDERDLA 225
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
I L +V+ + D L + + L + +++ + + +
Sbjct: 226 EIRGLTTDKVFAEIQDQLKASDAANRTEILRL----EAELLEVREVGSELEAVVLFDTIM 281
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + +V ++W F++ P W L + E
Sbjct: 282 RE----------DGNAQA-AQVREVWHFIKPKVSIQPKWYLDGIQQLE 318
>gi|167525988|ref|XP_001747328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774163|gb|EDQ87795.1| predicted protein [Monosiga brevicollis MX1]
Length = 437
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 61/173 (35%), Gaps = 3/173 (1%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDF-LNEARNSYEA 113
+ ++ G D L V+ ++ + FD F L+ + A
Sbjct: 252 ESDNVLVRGARSVTDTLTDRLGQVFENDESGAVLAEVQRLDPTFDRLAFTLHCEKKVIPA 311
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
++++F G +++ + + + R+++ ++ ++ I D++ I A +
Sbjct: 312 VLEAFIAGDKEVLKEWCAEVCFNNMAAQIDQREASGIIYEARILDIADVEYITAQRMDEG 371
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWV 224
+ Q D+ ++ + + + ++ RN +P W
Sbjct: 372 PVLVFVFNAQQTHCIRDRTGAVVEGSEDNIQQSMYMFAMRRNPAIFDPKLAWQ 424
>gi|254230446|ref|ZP_04923825.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|151937047|gb|EDN55926.1| conserved hypothetical protein [Vibrio sp. Ex25]
Length = 209
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 8/122 (6%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+ I F +F +RG+LG K G+ + SK ++ + + +N
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQPNMQNFEQQPNTNNGG 155
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
N FD F+N +R Y + ++ ++ IE+ V
Sbjct: 156 FGGFGAQTDVPHNYP--------PGFDQAAFINGSREHYRILQGAWNHNQLKTIEEYVSP 207
Query: 133 RV 134
+
Sbjct: 208 SL 209
>gi|74318798|ref|YP_316538.1| hypothetical protein Tbd_2780 [Thiobacillus denitrificans ATCC
25259]
gi|74058293|gb|AAZ98733.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 273
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 43 GFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKD 102
FF + + + G + + T FD
Sbjct: 110 RFFMRRNAPQPAMQYAGVPPGHNPRLHDATPAGATAGPATGFP----------PGFDAAG 159
Query: 103 FLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDM 162
F EA+ ++ + +F G + + ++ + + ++ R +++ V + D
Sbjct: 160 FAREAKLNFIRLQAAFDAGNLDDLRAFTSPEIFAELSMQMAER---GDVQQTTDVMMLDA 216
Query: 163 KIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN 222
+++ AS E+N +++R GQ + + + ++W + I
Sbjct: 217 EVLEASDEDNRHVVSVRFTGQ----VRENEGA-------APVALDEVWHLTKPIHGGG-G 264
Query: 223 WVLISTKLG 231
WV+ + G
Sbjct: 265 WVIAGIQQG 273
>gi|237756615|ref|ZP_04585131.1| import inner membrane translocase, subunit Tim44
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691229|gb|EEP60321.1| import inner membrane translocase, subunit Tim44
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 296
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ G + ++ + R+YQ + L K+ I++++I++ E +
Sbjct: 180 IQKAWSNGDLSPVKNFLTDRMYQYLEEQLKELKAKGLRNIVENPKIENLEIVHVEEEGDN 239
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV-RNIPPSNPNWVL 225
+ +R+ I + D D ++ D + W FV + + NW L
Sbjct: 240 KVVIVRLDASAIDYTVDSDGNIVEGDKYNPVSFTEYWAFVGKAL-----NWKL 287
>gi|47216426|emb|CAG01977.1| unnamed protein product [Tetraodon nigroviridis]
Length = 405
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 9/180 (5%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA-RNSYEA 113
+ + D + T +++V+ +IV FD FL + ++
Sbjct: 214 ESDNALIRASRAVTDRVTDFLGGLFSKTEMSEVLTEIVKADPTFDKDSFLKQCEKDIIPN 273
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y + K+ +S ++ ID++ + + E
Sbjct: 274 ILEAMIRGELDVLKDWCYEATYSQLAHPIQQAKALGLRFQSKVLDIDNIDLAMGKMMEQG 333
Query: 174 VYITIRIVGQFISASYDKDNLLISSDP------EIFGKVIDIWTFVRNIPPSNPN--WVL 225
+ I Q I ++ DP +++ +W R+ NP+ W L
Sbjct: 334 PVLIITFQAQVIMVIRSPKGDIVEGDPVSTVTSGKVMRMMYVWALCRDQEELNPSAAWRL 393
>gi|89092751|ref|ZP_01165704.1| hypothetical protein MED92_15633 [Oceanospirillum sp. MED92]
gi|89083263|gb|EAR62482.1| hypothetical protein MED92_15633 [Oceanospirillum sp. MED92]
Length = 294
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/222 (10%), Positives = 71/222 (31%), Gaps = 26/222 (11%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
+ I +FL + + ++ ++P + + I + ++++
Sbjct: 96 IQFMDLLLIAGVIFLIFKIMSMRRQ-AQQPTYANNGPQ-------QYEIKPHAEQQQREA 147
Query: 71 LDSINELFPIGTRLNKVMRDIVSVY-TD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ F N + F+ + FL A++ + + ++ I
Sbjct: 148 APEQDSNFKPMPSFNSGWGNSEEFELPSWFNRESFLEGAKSHFVTLQKAWDASNWDEIRT 207
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
++Q R + + +V + ++ N +++ V ++I G
Sbjct: 208 YTSDELFQALQQ---ERAKYPADQTTEVVSVM-AEVANFIDQKSEVIVSINFYGWL---- 259
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ E + + W R++ N +W ++ +
Sbjct: 260 --------KENSEETTEFNETWHLSRDMSVENADWFIVGIEQ 293
>gi|298292408|ref|YP_003694347.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
gi|296928919|gb|ADH89728.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
Length = 331
Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 14/232 (6%)
Query: 3 FIKMDSGDFLILLFAFIT-FFVFLQLRGVLG-KKTGNEKPFSGFFSGKYVFSKRDERGII 60
F + S ++ L I + ++L V+G ++ N+ ++G + + G
Sbjct: 111 FSGLGSLAGILGLLLQIALVVIVVRL--VMGWMRSRNQPSYAGGARPDPMQREALNGGAP 168
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
G + G R I +DFD F E I ++
Sbjct: 169 MGGAPMGGAPMGGAGAAPRAGFGTGPRGRPIQLQGSDFDT--F----ERRLEEIQTAYGR 222
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ +L + + L + + + V + + A E+ + Y T+ +
Sbjct: 223 ADRDTLLRLATPEMGGYLREELDQLERDGLENRLGDVKLLQGDLSEAWAEDGSEYATVAM 282
Query: 181 VGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ +K ++ DP +V++ WTFVR W+L + + G
Sbjct: 283 RYELTDVIVEKATGRIVQGDPSRKEQVVEFWTFVR---SPGGEWLLSAIQQG 331
>gi|260830091|ref|XP_002609995.1| hypothetical protein BRAFLDRAFT_247571 [Branchiostoma floridae]
gi|229295357|gb|EEN66005.1| hypothetical protein BRAFLDRAFT_247571 [Branchiostoma floridae]
Length = 257
Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 12/181 (6%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V F + FL + +
Sbjct: 67 ESDNVVVRASRLITDKVGDLVGGLFSKTEMSEVLTEIIKVDPSFTKEAFLKQCETDIIPN 126
Query: 114 IVDSFFEGKVHAIEKLV-------DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
I+++ G + ++ D +++ S K+ + S ++ ID++ +
Sbjct: 127 ILEAMIRGDLEILKDWCFEAVSNHDQKLHASSCQ--SQGKALGCHFDSKILDIDNLDLAT 184
Query: 167 ASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWV 224
+ E + I Q I + + DP KVI +W R+ +P +W
Sbjct: 185 GKVMEQGPVLVISFTAQQIMVVRNAKGEVTEGDPNKVLKVIYVWALCRDQEEFDPRASWK 244
Query: 225 L 225
L
Sbjct: 245 L 245
>gi|82702119|ref|YP_411685.1| import inner membrane translocase, subunit Tim44 [Nitrosospira
multiformis ATCC 25196]
gi|82410184|gb|ABB74293.1| import inner membrane translocase, subunit Tim44 [Nitrosospira
multiformis ATCC 25196]
Length = 295
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 77/222 (34%), Gaps = 22/222 (9%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
+L+ A + +F +R + + + + + + T G
Sbjct: 94 NMMDVLMLAALIGGIFFVMRMLRKPRQEHSARPMQYSGMQGTSTDHGVTPGATAATGSAP 153
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ + + P+ N I + DF + FL A+ S+ + + ++ I +
Sbjct: 154 ETTPRASAVAPVSGTGN-----IPA---DFQVEPFLRNAKTSFIRLQAANDARDLNDIRE 205
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
+Y + + ++ R + ++ ++ I+ +++ E++ ++R GQ
Sbjct: 206 YTTPEMYAEISMQINER--GNEPQRTDVLAIN-AQLLEVVTEKDMAIASVRFNGQLR--- 259
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S +IW +++ + W+L +
Sbjct: 260 --------ESPQSTPEAFDEIWHVQKDLKDPDAVWLLAGIQQ 293
>gi|20197991|gb|AAM15344.1| hypothetical protein [Arabidopsis thaliana]
Length = 499
Score = 71.8 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%)
Query: 91 IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEK 150
+ + F DF++E + + +++++ +G ++K + + S
Sbjct: 347 VHKIQESFSLPDFVSEIQEAIRPVLNAYSKGDAKTLKKYCSKELIERCTAEHRAFTSQGY 406
Query: 151 NVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
L+ + ++ I + T I +R Q I D+D + + V W
Sbjct: 407 FFDHKLLHVSEVDIQETKMMGTTPVIIVRFQTQEIFCVRDQDGKIKEGGQDTIHTVYYDW 466
>gi|188591179|ref|YP_001795779.1| hypothetical protein RALTA_A0388 [Cupriavidus taiwanensis LMG
19424]
gi|170938073|emb|CAP63057.1| conserved hypothetical protein, COG4395 [Cupriavidus taiwanensis
LMG 19424]
Length = 327
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 29/229 (12%)
Query: 8 SGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
S LI L AF ++ + RG K + + R + +G+
Sbjct: 120 SNLILIALVAFAAIWLIRKFRGS--------KRAAQPAYAGAGGAPNLGRNAEPMFRGEP 171
Query: 68 KDNLDSINELFPI------GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
P+ V + V DFD + FL A+ + + ++ G
Sbjct: 172 TPVSSGSQSASPVLPASAAPVAAGAVAQQPWGVPADFDTESFLRNAKVHFVRLQAAWDAG 231
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ I + ++ + L+ R + + K+ +V + + +++ ++R
Sbjct: 232 NLDDIREFTTPEMFAEIKMDLAERGA--EVNKTDVVTL-EAQLLGIESSPAQHLASVRFS 288
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
G +K E ++W + + N W+L +
Sbjct: 289 G----MIREKAG-------EAAQPFGEVWNLAKPV-SGNGGWLLAGIQQ 325
>gi|13475963|ref|NP_107533.1| hypothetical protein mll7160 [Mesorhizobium loti MAFF303099]
gi|14026723|dbj|BAB53319.1| mll7160 [Mesorhizobium loti MAFF303099]
Length = 328
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/205 (11%), Positives = 59/205 (28%), Gaps = 21/205 (10%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIV 92
+ + P + R E + + + G L +I
Sbjct: 139 RTQSAQGPAPALAGAGNAQASRFENRAAAQQQTASSFTIPGFGDGSG-GASLAADSEEIR 197
Query: 93 SVYTDFDPKDFLNEARNSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN 148
TD D +++ I ++F A+ + + ++ L+
Sbjct: 198 LAQTDLD----------AFQQLLTDIQEAFGREDHAALRRATTPEMVSYLSEELADNAQK 247
Query: 149 EKNVKSSLVGIDDMKIINA--SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ S + + I + + + +R + + ++ D + +
Sbjct: 248 GLRNEVSDITLLQADIAESWRENDRDYATAALRYESRDVMRERGS-GKVVEGDEDHPTET 306
Query: 207 IDIWTFVRNIPPSNPNWVLISTKLG 231
++WTF R NW L + +
Sbjct: 307 TELWTFTRQNGS---NWKLSAIQQA 328
>gi|302763825|ref|XP_002965334.1| hypothetical protein SELMODRAFT_83588 [Selaginella moellendorffii]
gi|300167567|gb|EFJ34172.1| hypothetical protein SELMODRAFT_83588 [Selaginella moellendorffii]
Length = 413
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T ++I S F DF+ E + I+ ++ +G + K V V +
Sbjct: 249 TATAAAFKEIRSRDPTFSFPDFVLEVQEDIRPILTAYLKGDYDTLRKKVCKEVVERCRAE 308
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
+S V + ++ I ++++ + + N I I Q D+ +
Sbjct: 309 HRALQSQGLYVDTKILYISELEVRESKLIGNEPVIIISFQTQQNYCVRDEFGHIREGSKA 368
Query: 202 IFGKVIDI 209
+ I
Sbjct: 369 SIDDIRTI 376
>gi|145590075|ref|YP_001156672.1| import inner membrane translocase, subunit Tim44 [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145048481|gb|ABP35108.1| import inner membrane translocase, subunit Tim44 [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 303
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 26/222 (11%)
Query: 8 SGDFLILLFAFITFFVFLQL-RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
S LL A I FV + L R +L SG V R + +
Sbjct: 103 SSLITGLLIAMIAGFVIMFLIRKIL-------PALSGAGQNTNVPPAAVPRSNLDQTPRQ 155
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ N + K I + FD + FL A+ + + ++ G + A+
Sbjct: 156 DPGFAPAANAYSGVSAADEKFESTIPA---GFDERTFLENAKQYFVNLQKAWDLGDLAAL 212
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ ++ L+ R + ++ ++ I D K++ E + +++ G
Sbjct: 213 GEFTTPEMFATIQQDLAGRSDSAN--QTDVLSI-DAKLLGIETSEAHYFCSVQFKG---- 265
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
++ S +IW + + WVL
Sbjct: 266 MIREQPGAPAS-------DFSEIWNLSKPVNGPG-GWVLAGI 299
>gi|56753483|gb|AAW24945.1| SJCHGC05805 protein [Schistosoma japonicum]
Length = 417
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 7/163 (4%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVH 124
D + S+ F I L +V+ ++ + F+ + F+ R + I +++ +
Sbjct: 245 TDKVSSLFGGFKINNELQEVLDEVTKMDPSFNLESFIRYCR--FVVIPNVLEAIVRVDLP 302
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
++ + L K +S ++ I ++ + I E + I Q
Sbjct: 303 ILQDWCHEAPFNVLATPLRQIKELGYVSESRILDIHNVDVQMGKIMEQGPVLIITFQAQQ 362
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
I DK+ + DP +V +W R+ +P W L
Sbjct: 363 IHCIRDKNGTVHEGDPNKVLRVTHVWALCRDQSEMHPLAAWRL 405
>gi|78355820|ref|YP_387269.1| hypothetical protein Dde_0773 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218225|gb|ABB37574.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 301
Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 26/222 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
ILLF + +FL LR + ++ G + + + + + D
Sbjct: 103 ILLFGGV---IFLILRMM--RRRGAPR-GEPAYQAGGAYQGGASHDVRQHDNTMYRQAQD 156
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ L G+ V FD ++FL AR+ Y + +S+ + I
Sbjct: 157 GWSGLRSAGSGSPSSAAPAPEVPAGFDTEEFLQGARSVYTRLQNSWDNRDLDDIRTFTSP 216
Query: 133 RVYQDFNDSLSTRKSNEKNV--KSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
V+ + R++ + ++ L+ I+ +++ E + + T+ D
Sbjct: 217 SVFDEI-----HRQAQDDPQPSRTELLLIN-ARVLEVKEETDGMLATVYFDVLMR---ED 267
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+PE V ++W F R + W L + E
Sbjct: 268 ASG----GNPEQ---VREVWHFHR--ATPDAMWRLDGIQQLE 300
>gi|114328920|ref|YP_746077.1| transporter [Granulibacter bethesdensis CGDNIH1]
gi|114317094|gb|ABI63154.1| transporter [Granulibacter bethesdensis CGDNIH1]
Length = 326
Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+ + ++ + + + + + FN+ L+ S + + V + + A E
Sbjct: 209 KEVQAAWTDRNLQQLGSISTPEMVGYFNEQLTALASRGLHNTVTNVTLQKGDLSEAWREG 268
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ ++ I A+YD ++ D + WTFVR W+L + +
Sbjct: 269 TLEYATVAMLFSMIDATYDSSGRVVEGDASQLQTATEFWTFVR---SPGGPWILSAIQQA 325
>gi|312797306|ref|YP_004030228.1| hypothetical protein RBRH_02101 [Burkholderia rhizoxinica HKI 454]
gi|312169081|emb|CBW76084.1| Hypothetical protein RBRH_02101 [Burkholderia rhizoxinica HKI 454]
Length = 367
Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 28/199 (14%)
Query: 36 GNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVY 95
G E P + + T G G+ D + + + L D+ +V
Sbjct: 191 GFESPSGASLRQYDASAAAPSQLPATGGMGQAGVAPDGQSRVAADPSVL-----DVPAVP 245
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN---- 151
FD F+ +A+ ++ + ++ G + I + ++ + +R +
Sbjct: 246 AGFDADAFIRQAKVAFVRLQAAWDAGNLDDIREFTTPEMFAEIKLDFDSRHGENRTDVVQ 305
Query: 152 VKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWT 211
+ + LVG++D N ++R G + ++W
Sbjct: 306 LNADLVGVEDRG-------GNEYVASVRFHG----LLRETQGAAAE-------PFAEMWN 347
Query: 212 FVRNIPPSNPNWVLISTKL 230
RN WVL +
Sbjct: 348 LSRNARSGE-GWVLAGIQQ 365
>gi|226480686|emb|CAX73440.1| Import inner membrane translocase subunit TIM44, mitochondrial
precursor [Schistosoma japonicum]
Length = 417
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDFN 139
L +V+ ++ + F+ + F+ R + I +++ + ++ +
Sbjct: 260 ELQEVLDEVTKMDPSFNLESFIRYCR--FVVIPNVLEAIVRVDLPILQDWCHEAPFNVLA 317
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
L K +S ++ I ++ + I E + I Q I DK+ + D
Sbjct: 318 TPLRQIKELGYVSESRILDIHNVDVQMGKIMEQGPVLIITFQAQQIHCIRDKNGTVHEGD 377
Query: 200 PEIFGKVIDIWTFVRNIPPSNP--NWVL 225
P +V +W R+ +P W L
Sbjct: 378 PNKVLRVTHVWALCRDQSEMHPLAAWRL 405
>gi|222149642|ref|YP_002550599.1| hypothetical protein Avi_3590 [Agrobacterium vitis S4]
gi|221736624|gb|ACM37587.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 270
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 42/118 (35%), Gaps = 4/118 (3%)
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ E A+ ++ + L + + V + + A E
Sbjct: 156 QKAYAEEDYSALRRITTPEAMSYLAEELGEHATKGVKNEVRDVHLLQGDLAEAWREGTVD 215
Query: 175 YITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ + + I D+ ++ DP+ + +++WTFVR W + + +
Sbjct: 216 YATVAMRYEAIDVMRDRATGAVVDGDPDHPQQSVEVWTFVRRPGSG---WSISAIQSA 270
>gi|167585475|ref|ZP_02377863.1| import inner membrane translocase, subunit Tim44 [Burkholderia
ubonensis Bu]
Length = 334
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 70/228 (30%), Gaps = 21/228 (9%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M S +I L A I ++ + ++ NE P +
Sbjct: 124 FASMMSNLIVIALLAAIGIWLIRKFMN---RRRSNE-PAYSVGGSASASGNYSQGPSFQA 179
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G G N + V FD + FL A+ + + ++ +G
Sbjct: 180 GNGSSYANEAQSVFGGGTAAAAAGAAAAPLQVPAGFDTEAFLRSAKVYFVRLQAAWDQGN 239
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ I + ++ + L +R + ++ +V + D +++ ++R G
Sbjct: 240 LADIREFTTPEMFAEIKIDLDSR--GNEANQTDVVQL-DAELVAIEDRGIEQSASVRFHG 296
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ N + ++W ++ W+L +
Sbjct: 297 ----LIREAANAPAA-------PFDEVWNLAKSGGQG---WLLAGIQQ 330
>gi|149927075|ref|ZP_01915333.1| hypothetical protein LMED105_09477 [Limnobacter sp. MED105]
gi|149824296|gb|EDM83516.1| hypothetical protein LMED105_09477 [Limnobacter sp. MED105]
Length = 340
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 63/231 (27%), Gaps = 40/231 (17%)
Query: 16 FAFITFFVF---LQLRGVLGKKTGNEKPFSGFFSGK-------YVFSKRDERGIITLGKG 65
I VF +R + G++ +P S +
Sbjct: 131 MLMIAAAVFAVMFLVRMLRGQQAAKPRPAYSAPGATGSGQNSYRQASTNPINDPVPGMGA 190
Query: 66 KKKD-------NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ D N + + P T + + FD +F+N A+ + + F
Sbjct: 191 PRNDQGFGQFGNASAFDAPMPAATP-------VKDLPAGFDEANFVNSAKKFFVTMQGVF 243
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G V + + V + R V + V D ++I + + T+
Sbjct: 244 DKGDVDGLREYCSDDVVDHLRAEIEAR---GNAVNRTDVVTLDAQLIGFETDVDEQIATV 300
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
G ++ ++W R + WVL
Sbjct: 301 AFTGMLR-----------EEQDAAAEEINELWIMSRPVSGGG--WVLSGIH 338
>gi|78706782|ref|NP_001027194.1| CG11779, isoform C [Drosophila melanogaster]
gi|16183135|gb|AAL13638.1| GH18370p [Drosophila melanogaster]
gi|71854565|gb|AAZ52531.1| CG11779, isoform C [Drosophila melanogaster]
Length = 430
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 58/152 (38%), Gaps = 1/152 (0%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ + D + + T L++ M ++V + FD KDFL + +
Sbjct: 274 ESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDIIPN 333
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I++S G + ++ + + + K + S ++ I+++++ + E
Sbjct: 334 ILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIENIELAMGKVMEQG 393
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+ I Q I D+ + ++ DPE
Sbjct: 394 PVLIITFQAQQIMCVRDQKSQVVEGDPEKPKP 425
>gi|217978356|ref|YP_002362503.1| import inner membrane translocase subunit Tim44 [Methylocella
silvestris BL2]
gi|217503732|gb|ACK51141.1| import inner membrane translocase subunit Tim44 [Methylocella
silvestris BL2]
Length = 329
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 109 NSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
+++E + ++ + ++A+ L + F + L K S V +
Sbjct: 202 SAFEQRLFAVQKAYSDEDMNALRALSTPEMASYFAEELGENARKGVVNKLSKVEFLQGDL 261
Query: 165 INA--SIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
A + + +R I + D+ L++ DP + +IWTF R
Sbjct: 262 AEAWSEANGDYASVAMRFS--MIDQTLDRATGRLVAGDPSAPQQATEIWTFTRRSGGGAQ 319
Query: 222 NWVLISTKLG 231
+W L +
Sbjct: 320 DWKLSGIQQA 329
>gi|219115361|ref|XP_002178476.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410211|gb|EEC50141.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 510
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 75/189 (39%), Gaps = 7/189 (3%)
Query: 45 FSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFL 104
+ + D + + + S+ + + + ++++ + +F +D+
Sbjct: 311 AKARVDHIREDAKEAWETSQNPWVYRVSSVYDTLTAESPETRAVKELRQLDPEFTLEDWK 370
Query: 105 -NEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK 163
+ ++ I+ F EG+++ ++ + V++ ++ R+ + ++L+GI + +
Sbjct: 371 ADVVEHTLPQIMQWFLEGRINQLKPWLGEGVFKRLAAEMTAREKEGVQIDTNLLGIMNSE 430
Query: 164 IINA---SIEENTVYITIRIVGQFISAS-YDKDNLLISSDPEIFGKVIDIWTFVR--NIP 217
I+ + + I + + Q I+ KD+ ++ + + F R +
Sbjct: 431 ILAIEPDEVNRGSPIIILHFMAQQINCVKKKKDDEIVEGAEDDIRANSYVTAFQREYDEE 490
Query: 218 PSNPNWVLI 226
NW ++
Sbjct: 491 KGELNWKIV 499
>gi|90418181|ref|ZP_01226093.1| conserved hypothetical protein with Tim44-like domain [Aurantimonas
manganoxydans SI85-9A1]
gi|90337853|gb|EAS51504.1| conserved hypothetical protein with Tim44-like domain [Aurantimonas
manganoxydans SI85-9A1]
Length = 203
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 24/214 (11%)
Query: 24 FLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
F + R S + ++R T G + SI +G
Sbjct: 6 FFRSRN-----------PSPARANGGGHTERRAYEEPTQPAGNGSFRIPSIGSGAGLGGG 54
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFN 139
+ D + +++E + +F A+ + +
Sbjct: 55 SAATGAATAAAEPS-DEIGITDADLDTFEQKLHEVQAAFSREDYAALRTITTPEIMSYLA 113
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT--VYITIRIVGQFISASYDKD-NLLI 196
+ LS ++ + V ++ I A E +T + +R I D+ ++
Sbjct: 114 EELSENATSGRKNDVLDVKLEQGDIAEAWREGDTEYASLAMRYSS--IDVMRDRTTGEVV 171
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
DP+ + ++WTFVR+ W L + +
Sbjct: 172 EGDPDTPTETTELWTFVRDKGGE---WKLSAIQE 202
>gi|332702904|ref|ZP_08422992.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
africanus str. Walvis Bay]
gi|332553053|gb|EGJ50097.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
africanus str. Walvis Bay]
Length = 343
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 63/217 (29%), Gaps = 25/217 (11%)
Query: 16 FAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
A + F F++ R V S S + R + + S +
Sbjct: 151 LAGLMLFRFIRSRKV-----------SQASSAAMAGNDRYAYAAAQADRSSPAASAGSWD 199
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
L + + ++ D +FL+ A+ Y + S+ + I V
Sbjct: 200 SLRSASAQASSAPEAGPAMPEGLDEAEFLSGAKALYARLQASWNRRDLKDIRAFTSPEVL 259
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ + + + + V + + +++ + IT+
Sbjct: 260 ----AEIERQAAEDPTPDKTDVLMLNARVLEVRRDGQQTVITVLYDALLRE--------- 306
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+V ++W R+ P W+L + E
Sbjct: 307 -DQSASQPTQVREVWHIRRDESAPRPEWILEGIQQLE 342
>gi|224000153|ref|XP_002289749.1| tim44-like protein [Thalassiosira pseudonana CCMP1335]
gi|220974957|gb|EED93286.1| tim44-like protein [Thalassiosira pseudonana CCMP1335]
Length = 252
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 64/186 (34%), Gaps = 12/186 (6%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA-RNSY 111
K D + S+ + + R + + DF +++ + ++
Sbjct: 56 KEDAAEAWETSQNPWVYRASSVYDTLTAESEFAAASRQLQKLDPDFTLENWKRDVVEHTL 115
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
I+ F EG++ ++ + VY + RK + ++++ I + +I+ +
Sbjct: 116 PQIMKLFLEGRIQELKPWLGEAVYNRLAAEVRARKKEGVQMDTNILAIMNAEILACELAG 175
Query: 172 NTVYIT--------IRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPS--N 220
++V + + + Q I K + ++ + + F R
Sbjct: 176 SSVNVDKGDDPILLLHFMCQQIHCVRKKKIDDIVEGSEDDIRANSYVVAFQREYNEEKME 235
Query: 221 PNWVLI 226
NW ++
Sbjct: 236 LNWKIV 241
>gi|159483173|ref|XP_001699635.1| hypothetical protein CHLREDRAFT_141592 [Chlamydomonas reinhardtii]
gi|158281577|gb|EDP07331.1| predicted protein [Chlamydomonas reinhardtii]
Length = 311
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 22/151 (14%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
F ++Y+A+ + G + E V + ++ R + +V +
Sbjct: 160 GFSKSALQQRVLDAYKAVNAALAAGDMALAEPYVTEQTGLRLAGEVARRGRS--SVTWRM 217
Query: 157 VG---IDDMKIINASIEEN--------TVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
V D+K+++ +I N T RI + + A YD L++ DP+ +
Sbjct: 218 VREPKPSDIKLVHGTIVSNPLKQGKLHFAQWTARIPSRQVVAVYDNRGKLLAGDPDKELE 277
Query: 206 VIDIWTFVRNI---------PPSNPNWVLIS 227
V+D W F R I PS W L+
Sbjct: 278 VVDHWVFERPILKAWIAPRPGPSGAEWRLVE 308
>gi|194212576|ref|XP_001497048.2| PREDICTED: similar to Import inner membrane translocase subunit
TIM44, mitochondrial [Equus caballus]
Length = 488
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + N + I +++ G++ ++ Y
Sbjct: 297 TEMSEVLTEILRVDPAFDKDRFLQQCEN--DIIPNVLEAMISGELDILKDWCYEATYSQL 354
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISS 198
+ K+ S ++ ID++ + + E + I Q + + ++
Sbjct: 355 AHPIQQAKALGLQFHSRILDIDNIDLAMGKMMEQGPVLIITFQAQLVMVVKNPKGEVVEG 414
Query: 199 DPEIFGKVID 208
DP + G +D
Sbjct: 415 DPALLGPRVD 424
>gi|170691438|ref|ZP_02882603.1| import inner membrane translocase subunit Tim44 [Burkholderia
graminis C4D1M]
gi|170143643|gb|EDT11806.1| import inner membrane translocase subunit Tim44 [Burkholderia
graminis C4D1M]
Length = 332
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 76/219 (34%), Gaps = 19/219 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I++ A + +R LG+K +P ++G G + +
Sbjct: 128 IIVIALLAMIGIWLIRRFLGRKRDTSQP---AYAGHSPSLNSGATGYTQEPQEPRYTAPP 184
Query: 73 SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ + L P G L + SV FD + FL A+ + + ++ G + I +
Sbjct: 185 TGSYLEPQGNPLTTPSVNATPSVPAGFDSEAFLRNAKVYFVRLQAAWDVGNIDDIREFTT 244
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ + LS+R + ++ +V ++ ++ N + ++R
Sbjct: 245 PEMFAEVRVDLSSRGAG--TNQTDVVQLN-ADLLGVEERANEYFASVRFS---------- 291
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
L+ + +++W + W+L +
Sbjct: 292 -GLIREAPGAAAEPFVEVWNLSK-ANRPGEGWLLAGIQQ 328
>gi|212702059|ref|ZP_03310187.1| hypothetical protein DESPIG_00061 [Desulfovibrio piger ATCC 29098]
gi|212674574|gb|EEB35057.1| hypothetical protein DESPIG_00061 [Desulfovibrio piger ATCC 29098]
Length = 300
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 63/219 (28%), Gaps = 30/219 (13%)
Query: 14 LLFAFITFFVFLQL--RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
+L I FV L+L R + G + +
Sbjct: 108 ILLLGILLFVGLKLFARS------------RSKAQPAPAGAGNAPMGGMEPPLQRNDTAA 155
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ L N ++ + DFD ++FL A+ +Y + ++ ++ I +
Sbjct: 156 AGWDTLSSQDNTYNSQPEVVIPMPADFDAEEFLRGAKMAYNRLQAAWDNRDLNDIAQFAS 215
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
V L+ K + + + ++++ E+ +
Sbjct: 216 PAVMDAVRQQLAEETEPSKTE----ILLVNAQLLSVVNEDKEQRAQVYFDVLMRERP--- 268
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D V +IW FVR + W L +
Sbjct: 269 -------DQPTPSNVREIWHFVRELDGG--TWKLDGIQQ 298
>gi|94986557|ref|YP_594490.1| hypothetical protein LI0112 [Lawsonia intracellularis PHE/MN1-00]
gi|94730806|emb|CAJ54168.1| uncharacterized protein conserved in bacteria [Lawsonia
intracellularis PHE/MN1-00]
Length = 313
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 81/226 (35%), Gaps = 31/226 (13%)
Query: 13 ILLFAFITFFVFLQL---RGVLGKKTGNEKPFSG--FFSGKYVFSKRDERGIITLGKGKK 67
++L A + ++ +L R K T NE + + + + + S+ TL
Sbjct: 111 LILIAGL-VYLAYRLFFKR----KITSNEASVTNSLYATQQPLTSEMPIPRSTTLSGTGW 165
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126
+ + + I + DF+ ++FL A+ +Y + ++ + I
Sbjct: 166 ESLKSQHTTYSADVSN-----QAITTNIPIDFNEEEFLKGAKAAYVRLNAAWDNRDLEDI 220
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
++ + ++ N +++ + + + +++ E+ +++ +
Sbjct: 221 QQFTTPGFLNELQQQITE----NPNPETTEIMLVNASVVDVKKIEDEELVSVYF-----N 271
Query: 187 ASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ E +V +IW FVR +W L + E
Sbjct: 272 VLLKENQ-----SQESPIEVREIWHFVRP-ASGEGSWKLDGIQQVE 311
>gi|94309317|ref|YP_582527.1| import inner membrane translocase, subunit Tim44 [Cupriavidus
metallidurans CH34]
gi|93353169|gb|ABF07258.1| import inner membrane translocase, subunit Tim44 [Cupriavidus
metallidurans CH34]
Length = 329
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 18/221 (8%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++LF I +R G ++P G TL + N
Sbjct: 122 VILFGVIALIAMWLIRKFRGGSARTQQPSYAGMGGNGSNYGGPSHAEPTLRTAEPVGNGG 181
Query: 73 SINELFPIGTRLNKVMRDIVSVY---TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + G + + DFD + FL A+ Y + ++ G I +
Sbjct: 182 AASNPVMGGAAAAATAAAVQQPWGVPADFDTESFLRNAKVHYVRLQAAWDAGNQDDIREF 241
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
++ + LS R S + K+ +V + D +++ ++R G
Sbjct: 242 TTPEMFAEIKMDLSERGS--EVNKTDVVTL-DAQLLGIESTPAQHIASVRFSG----MIR 294
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+K ++W + N W+L +
Sbjct: 295 EKAGEP-------AQPFGEVWNLAK-ATSGNGGWLLAGIQQ 327
>gi|209521830|ref|ZP_03270508.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
H160]
gi|209497734|gb|EDZ97911.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
H160]
Length = 333
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 22/221 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+++ A I V +R + TG ++ + S
Sbjct: 132 VIVIALIAIVVIWLIR----RFTGRKRDATQPDYAGTAPSLNANSTGYMQEPRYTAPPTG 187
Query: 73 SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ L P G L + SV FD + FL A+ + + ++ G V I +
Sbjct: 188 A--YLEPQGNPLTTPSIGAPPSVPAGFDSEAFLRNAKVYFVRLQAAWDAGNVEDIREFTT 245
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ + L++R + ++ +V ++ +++ N + ++R
Sbjct: 246 PEMFAEVRVDLASRGTQPN--QTDVVQLN-AELLGVEERANESFASVRFS---------- 292
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
L+ +++W R W+L + E
Sbjct: 293 -GLIREEPGAAAEPFVEVWNLSRANRAGE-GWLLAGIQQVE 331
>gi|113866475|ref|YP_724964.1| hypothetical protein H16_A0446 [Ralstonia eutropha H16]
gi|113525251|emb|CAJ91596.1| hypothetical membrane spanning protein [Ralstonia eutropha H16]
Length = 329
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 79/237 (33%), Gaps = 40/237 (16%)
Query: 8 SGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
S LI L AF ++ + RG G+++ ++G R + +G+
Sbjct: 117 SNLILIALVAFAAIWLIRKFRG------GSKRTQQPAYAGAGNAP-NLGRSAEPMFRGEP 169
Query: 68 KDNLDSINELFPIGTRLNKVM--------------RDIVSVYTDFDPKDFLNEARNSYEA 113
++ P G N V+ + V DFD + FL A+ +
Sbjct: 170 TP----VSSGSPAGPAANTVLPAASAAPVAADAVAQQPWGVPADFDTEAFLRNAKVHFVR 225
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ G + I + ++ + L+ R + + K+ +V + + +++
Sbjct: 226 LQAAWDAGNLDDIREFTTPEMFAEIKMDLADRGA--EVNKTDVVTL-EAQLLGIESAAAQ 282
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R ++ E ++W + W+L +
Sbjct: 283 HIASVRFS-----------GMIREKSGEAAQPFGEVWNLAKP-ASGTGGWLLAGIQQ 327
>gi|193620416|ref|XP_001947189.1| PREDICTED: mitochondrial import inner membrane translocase subunit
TIM44-like [Acyrthosiphon pisum]
Length = 409
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 66/176 (37%), Gaps = 11/176 (6%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
D I+ D L S+ ++ V+ ++ V DF +F+ + + I
Sbjct: 228 DSDHILARATRSVTDTLSSVFHNAE----MSDVVTELCRVEPDFSLVNFIRQCET--DII 281
Query: 115 ---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171
+++ + ++ Y+ + ++ + ++ + ++ ++ + E
Sbjct: 282 PNVLEAIAREDLIILKDWCFEAPYRVLSHPVTEHRQKGHQTYCKVLDVHNVDVVTGKLME 341
Query: 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ + I Q I D + L+I DP +V+ W R++ NP W L
Sbjct: 342 HGPVLIISFSAQQIMYIKDVNGLIIEGDPHTVIRVMYTWAMCRDVNEVNPRAAWKL 397
>gi|290562045|gb|ADD38419.1| Probable 39S ribosomal protein L45, mitochondrial [Lepeophtheirus
salmonis]
Length = 340
Score = 68.8 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSF----FEGKVHAIEKLVDSRVYQDFNDSLST 144
R I S DFD K FL +A+ Y + + G+ + K V + Y + ++
Sbjct: 145 RKIRSYEDDFDQKTFLLQAQEIY---IKAHKSLVENGEDECLLKYVTEKAYPEMVHNVRR 201
Query: 145 RKSNEKNVKS----SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ + +KS ++V I ++ + +T+R Q A YD+ LI
Sbjct: 202 KTLRWEFIKSLEPPTIVHIRTQDLLQ--KQNKFAQVTVRFHTQQTLAVYDRFGRLIHGSE 259
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F R++ +W L
Sbjct: 260 VVAKDVLEYVVFERHLASIYESWRL 284
>gi|188996487|ref|YP_001930738.1| import inner membrane translocase subunit Tim44
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931554|gb|ACD66184.1| import inner membrane translocase subunit Tim44
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 295
Score = 68.8 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ G + ++ + R+YQ + L K+ I++++I++ E +
Sbjct: 179 IQKAWSNGDLSPVKNFLTDRMYQYLEEQLKDLKAKGLRNIVENPKIENLEIVHVEEEGDN 238
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV-RNIPPSNPNWVL 225
+ +R+ I + D + ++ +D + W FV + + NW L
Sbjct: 239 KVVIVRLDASAIDYTVDSNGNIVEADKYNPVSFTEYWAFVGKAL-----NWKL 286
>gi|217968675|ref|YP_002353909.1| import inner membrane translocase subunit Tim44 [Thauera sp. MZ1T]
gi|217506002|gb|ACK53013.1| import inner membrane translocase subunit Tim44 [Thauera sp. MZ1T]
Length = 294
Score = 68.8 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 74/227 (32%), Gaps = 28/227 (12%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
+F+++L F +L F + RD +
Sbjct: 95 GFANFVMILLLAAAAFFVFRL------------IFRRGANAAAQQPARDLQYAGAPAGAA 142
Query: 67 KKDNLDSINELFP-IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
++ P G ++ ++ + FD + F +A+ ++ + + G +
Sbjct: 143 QQARPQQFEAGRPLAGGSVSAQSGLDKALASGFDAEGFARQAKLNFIRLQAANDAGNLDD 202
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ + V+ + ++ RK + + +V ++ I A E + +++R G
Sbjct: 203 LREFTTPEVFAELCMQVNERKGAGQR--TDVVELNAQVIDVAE-ENDRYVVSVRFSGLLR 259
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ PE +IW + + S W++ + +
Sbjct: 260 --------EQAEAAPEA---FDEIWHLSKPLAGSG-GWLIAGIQQSQ 294
>gi|225712958|gb|ACO12325.1| Probable 39S ribosomal protein L45, mitochondrial precursor
[Lepeophtheirus salmonis]
Length = 340
Score = 68.8 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSF----FEGKVHAIEKLVDSRVYQDFNDSLST 144
R I S DFD K FL +A+ Y + + G+ + K V + Y + ++
Sbjct: 145 RKIRSYEDDFDQKTFLLQAQEIY---IKAHKSLVENGEDECLLKYVTEKAYPEMVHNVRR 201
Query: 145 RKSNEKNVKS----SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ + +KS ++V I ++ + +T+R Q A YD+ LI
Sbjct: 202 KTLRWEFIKSLEPPTIVHIRTQDLLQ--KQNKFAQVTVRFHTQQTLAVYDRFGRLIHGSE 259
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F R++ +W L
Sbjct: 260 VVAKDVLEYVVFERHLASIYGSWRL 284
>gi|50085732|ref|YP_047242.1| hypothetical protein ACIAD2665 [Acinetobacter sp. ADP1]
gi|49531708|emb|CAG69420.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 340
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 68/228 (29%), Gaps = 32/228 (14%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKK---TGNEKPFSGFFSGKYVF-----SKRDERGIITL 62
I+L A I FF+F + G K GN P++ +G + R G
Sbjct: 136 IWIVLIAAIAFFIFRR----FGAKKKLAGN-NPYAPNNAGGSTPFSTSTTPRSNAGADNT 190
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ + P GT + + +P FL AR + I
Sbjct: 191 NIFGQSVGGGAAPTAAPFGTAYSNSGNQLPD---GTEPAAFLRIARQRFNHIQSVNSASN 247
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ I + + +Y + + + + ++ + + S E +++R
Sbjct: 248 IEEIRRYLTPDLYASMYSDIMANQDQDV---AEFSNLN-AMVADTSTENGQYIVSVRF-- 301
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++W FV+ + W + +
Sbjct: 302 ---------TGTVSEDLNSQPQPFSEVWHFVKPAGSTE-EWKVAGIQQ 339
>gi|194910892|ref|XP_001982246.1| GG11153 [Drosophila erecta]
gi|190656884|gb|EDV54116.1| GG11153 [Drosophila erecta]
Length = 361
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 94 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISTSGAKQKL-----EFLEKKSK 148
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S +F DF EA++ Y + I + V R Y + ++
Sbjct: 149 SLMAVRKIRSYDENFSSDDFGAEAQDIYIQAHTHMAAKDKYKIREFVSERCYPEMMHNVK 208
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLI 196
K ++ + ++ ++++A + E +T+R Q + A YD+ L+
Sbjct: 209 D-----KTIRWKFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLM 263
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
I V++ F ++I W L
Sbjct: 264 HGSEIITKDVLEYVVFEKHISNEYGKWRL 292
>gi|171464177|ref|YP_001798290.1| import inner membrane translocase subunit Tim44 [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193715|gb|ACB44676.1| import inner membrane translocase subunit Tim44 [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 303
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 72/223 (32%), Gaps = 26/223 (11%)
Query: 7 DSGDFLILLFAFITFFVFLQL-RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
S LL A + FV + + R +L S G + S +R I
Sbjct: 102 SSSLITGLLIAMLAGFVIMFVIRKLL-------PSLSSAGQGPNLSSNGMQRTGIDQAPR 154
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
++ + N + + FD + FL + + + ++ +G + +
Sbjct: 155 QEPAFTPAANAFGGVSAEPEPFQSTLP---PGFDKQTFLENVKQYFVTLQKAWDQGDLAS 211
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ + ++ L+ R + ++ +V I+ +++ + + +++ G
Sbjct: 212 LREFTTPEMFATIQQDLAGRTDG--SNQTDVVTIN-AQLLGIETADGHYFCSVQFSG--- 265
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ S +IW + + WVL
Sbjct: 266 -MIRELQGAPAS-------DFSEIWNLSKPVEGLG-GWVLAGI 299
>gi|307111739|gb|EFN59973.1| hypothetical protein CHLNCDRAFT_133085 [Chlorella variabilis]
Length = 434
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 35/191 (18%)
Query: 24 FLQLRGV-LGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGT 82
F ++RG+ LG + FS ++ T D+++ L G
Sbjct: 239 FARMRGLNLG--------ANPVFSKGREAAESIRERWETSDSPLVHRIQDAVDSLQTEGE 290
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+ + +R+I + FD FL R + +V ++ E
Sbjct: 291 Q-ARALREIRARDPSFDMVAFLRGLRADVQTVVKAYLESD-------------------- 329
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI 202
+L+ ++++++ E + ++ Q I+ + D ++ P+
Sbjct: 330 ----EGGLVPDPTLLDTSEVELVDIKWLEEEPIVVVQFTCQQINCTRDSFGNVVDGKPDE 385
Query: 203 F-GKVIDIWTF 212
+V W +
Sbjct: 386 VHRRVAGWWVY 396
>gi|21355709|ref|NP_651072.1| mitochondrial ribosomal protein L45 [Drosophila melanogaster]
gi|29611874|sp|Q9VCX3|RM45_DROME RecName: Full=Probable 39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|7300891|gb|AAF56032.1| mitochondrial ribosomal protein L45 [Drosophila melanogaster]
gi|17945151|gb|AAL48635.1| RE09223p [Drosophila melanogaster]
gi|220947926|gb|ACL86506.1| mRpL45-PA [synthetic construct]
gi|220957222|gb|ACL91154.1| mRpL45-PA [synthetic construct]
Length = 361
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 94 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISTSGAKQKL-----EFLEKKSK 148
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S +F DF EA++ Y + I + V R Y + ++
Sbjct: 149 SLMAVRKIRSYDENFSSDDFGAEAQDIYIQAHTHMAAKDKYKIREFVSERCYPEMMHNVK 208
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLI 196
K ++ + ++ ++++A + E +T+R Q + A YD+ L+
Sbjct: 209 D-----KTIRWKFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLM 263
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
I V++ F ++I W L
Sbjct: 264 HGSEIITKDVLEYVVFEKHISNEYGKWRL 292
>gi|295675463|ref|YP_003603987.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1002]
gi|295435306|gb|ADG14476.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1002]
Length = 334
Score = 68.4 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 72/221 (32%), Gaps = 22/221 (9%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+++ A I V +R + TG ++ + S
Sbjct: 133 VIVIALIAMVVIWLIR----RFTGRKRDAAQPAYAGTAPSLNTRGTDYIQEPRYTAPPTG 188
Query: 73 SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
S L P G L + SV FD + FL A+ + + ++ G + I +
Sbjct: 189 S--YLEPQGNPLTTPSLGATPSVPAGFDSEAFLRNAKVYFVRLQAAWDVGNIDDIREFTT 246
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ + L+ R + + ++ +V ++ +++ + ++R
Sbjct: 247 PEMFAEVRVDLTARGTQQN--QTDVVQLN-AELLGVEERATEYFASVRFS---------- 293
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
L+ + +++W + W+L + E
Sbjct: 294 -GLIREAPGAAAEPFVEVWNLTKANRAGE-GWLLAGIQQVE 332
>gi|158425088|ref|YP_001526380.1| hypothetical protein AZC_3464 [Azorhizobium caulinodans ORS 571]
gi|158331977|dbj|BAF89462.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 335
Score = 68.4 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 104 LNEAR-NSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVG 158
L A +++E I ++ + + +LV + F + L + + V
Sbjct: 207 LKGADFDAFEKLLSDIQAAYSREDRNKLAELVTPEILGYFEEELRANAERGVRNQVNDVK 266
Query: 159 IDDMKIINASIEENTVYITIRIVGQFISASYDK-DNLLISSDPEIFGKVIDIWTFVRNIP 217
+ + A E Y T+ + + D+ L + + + ++WTF+R
Sbjct: 267 LLQGDLSEAWREGQFEYATVALRYEARDTMRDRTTGALAAGSTDAPSQSTEVWTFIRLRG 326
Query: 218 PSNPNWVLISTK 229
W L + +
Sbjct: 327 QP---WKLSAIQ 335
>gi|118785408|ref|XP_314650.3| AGAP008539-PA [Anopheles gambiae str. PEST]
gi|116127723|gb|EAA10193.3| AGAP008539-PA [Anopheles gambiae str. PEST]
Length = 418
Score = 68.4 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 57/179 (31%), Gaps = 12/179 (6%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNS---- 110
+ + D + + T L+ + ++ + F+ K FL
Sbjct: 232 ESENVAIRTSRALTDKVSQVMGNLFSKTELSAALTEVCRIDPSFEAKQFLQFCERHVIPN 291
Query: 111 -YEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
E+I+ G++ + Y + +S L+ I+++++ +
Sbjct: 292 VLESIL----RGELDVLRDWCFESAYSVIATPIVQGLEAGCRFESKLLDIENVELAMGQV 347
Query: 170 EENTVYITIRIVGQFISASYDKDN-LLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
E + + Q I + +I DPE + W R+ NP W +
Sbjct: 348 MEQGPVLIVTFQAQQIVCVREGTGAAVIEGDPEKVFRCHHAWVLCRDPSELNPQAAWRI 406
>gi|319784935|ref|YP_004144411.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317170823|gb|ADV14361.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 327
Score = 68.0 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++F A+ + V + ++ L+ + + + + I + E+
Sbjct: 213 VQEAFGREDHAALRRAVTPEMVSYLSEELADNAQKGLRNEVTDITLLQADIAESWREDER 272
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T + + + ++ +++ D + + ++WTFVR NW L + +
Sbjct: 273 DYATAALRYESRDVTRERASGKIVAGDDDHPTETTELWTFVRENGS---NWKLSAIQA 327
>gi|283851351|ref|ZP_06368633.1| import inner membrane translocase subunit Tim44 [Desulfovibrio sp.
FW1012B]
gi|283573301|gb|EFC21279.1| import inner membrane translocase subunit Tim44 [Desulfovibrio sp.
FW1012B]
Length = 309
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 25/199 (12%)
Query: 33 KKTGNEKP-FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDI 91
++T +E P + + V R+ P G ++
Sbjct: 132 RRTASEGPSMARTYEAAPVPPVREPLREAAANGWSNLGASPQAGASAPAGPQVPAG---- 187
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
FD DFL A+ + + S+ + I F + + + + +
Sbjct: 188 ------FDVDDFLTGAKALFGRLQKSWSARDLADIAAFSTP----AFMEDVRKQAAADPT 237
Query: 152 VKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWT 211
+ V + D K++ + T + + PE V ++W
Sbjct: 238 PTPTDVLLVDAKLLEVRSQGTTTIASAYFDTLLR-------EDPKAGQPEQ---VREVWH 287
Query: 212 FVRNIPPSNPNWVLISTKL 230
FVR W L + +
Sbjct: 288 FVRRNDTPGDTWRLDAIQQ 306
>gi|306840266|ref|ZP_07473040.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO2]
gi|306289793|gb|EFM60975.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO2]
Length = 342
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 12/228 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +R ++ + + S+ G+G
Sbjct: 126 MFGLILQVAVIALIAMFV---MRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQG 182
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
S+N V + + V + D F I ++ A
Sbjct: 183 SFSGRTPSVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGAYGREDYAA 237
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ KL + L S K + V + + A E N Y T+ + I
Sbjct: 238 LRKLTTPEAMSYLAEELGEIASGGKRNEVKDVRLLQGDVSEAWREGNVEYATVAMRYSAI 297
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ ++ +P + +++WTF R + W L + + E
Sbjct: 298 DVMVDRTSGAIVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 342
>gi|319942109|ref|ZP_08016427.1| hypothetical protein HMPREF9464_01646 [Sutterella wadsworthensis
3_1_45B]
gi|319804319|gb|EFW01203.1| hypothetical protein HMPREF9464_01646 [Sutterella wadsworthensis
3_1_45B]
Length = 330
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DFD + FL AR++Y + ++ G V I + ++ L R+ + + +
Sbjct: 207 DFDREGFLKTARDNYLKLQQAWDTGNVIEISDFTSNEIFTAVTHQL--RERKGEVYHTEV 264
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
+++ +++ + ++ T Y ++R G ++S +PE +IW + +
Sbjct: 265 KSLEN-ELLGIAQQDGTYYASVRFFGSL----------VVSGEPET---FDEIWVLEKPV 310
Query: 217 PPSNPNWVLISTKLGE 232
+ W+L + + E
Sbjct: 311 TGTG-GWLLCAIRQNE 325
>gi|115523579|ref|YP_780490.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisA53]
gi|115517526|gb|ABJ05510.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisA53]
Length = 329
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 8/126 (6%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I +++ +G + + L + F L K+ K S V + +
Sbjct: 207 EAFERLLGEIQETWSKGDIGHLHMLATPEMVSYFTSDLDANKARGVVNKVSDVKLLQGDL 266
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
+ E T Y T+ + + + D ++ + + ++WTF R W
Sbjct: 267 AESWREGETDYATVAMRFSLVDKTTDASGAIVEGS-DQPIEATEVWTFARRQGSD---WE 322
Query: 225 LISTKL 230
L + +
Sbjct: 323 LSAIQQ 328
>gi|239832154|ref|ZP_04680483.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
intermedium LMG 3301]
gi|239824421|gb|EEQ95989.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
intermedium LMG 3301]
Length = 345
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 13/229 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK- 64
M + + A I FV +R ++ + + K L
Sbjct: 128 MFGLILQVAVIALIAMFV---MRMFANRRQPAAAGAGNAGAQPFGAPKSAAPQAGPLAGF 184
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
G + +++ V + + V + D F + ++
Sbjct: 185 GGRTPSVNPFETKQEAAPAAPAVEDEPMDVGQE-DLDRF----EQMLSEVQTAYGREDYA 239
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
A+ KL + L S+ + V + + A E N Y T+ I
Sbjct: 240 ALRKLTTPEAMSYLAEELGEIASSGMRNEVKDVKLLQGDVSEAWREGNAEYATVAIRYSA 299
Query: 185 ISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
I D++ ++ +P + +++WTF R + W L + + E
Sbjct: 300 IDVMLDRNTGTVVEGNPNEPVESVELWTFTR---QDSGEWQLAAIQGTE 345
>gi|195502658|ref|XP_002098321.1| GE10319 [Drosophila yakuba]
gi|194184422|gb|EDW98033.1| GE10319 [Drosophila yakuba]
Length = 361
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 79/209 (37%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 94 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISTSGAKQKL-----EFLEKKSK 148
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S F DF EA++ Y + + I + V R Y + ++
Sbjct: 149 SLMAVRKIRSYEESFSTDDFGAEAQDIYIQAHTHMAAKEKYKIREFVSERCYPEMMHNVK 208
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLI 196
K + + ++ ++++A + E +T+R Q + A YD+ L+
Sbjct: 209 D-----KTIHWKFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLM 263
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 264 HGSEIVTKDVLEYVVFEKHISNEYGKWRL 292
>gi|153009251|ref|YP_001370466.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
anthropi ATCC 49188]
gi|151561139|gb|ABS14637.1| import inner membrane translocase subunit Tim44 [Ochrobactrum
anthropi ATCC 49188]
Length = 348
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 75/232 (32%), Gaps = 16/232 (6%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +++ N + + +G G
Sbjct: 128 MFGLLLQVAVIALIAMFV-MRMFA-------NRRQPAAAGAGNAGAQPFGAAKTAAPQAG 179
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA----IVDSFFEG 121
+ + P T+ + + +P D E + +E + ++
Sbjct: 180 SQAGFGGRTPSVNPFETKQAAAPVTPAAPAVEDEPMDVGQEDLDRFEQMLAEVQTAYGRE 239
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
A+ KL + L S+ + V + + A E + Y T+ I
Sbjct: 240 DYAALRKLATPEAMSYLAEELGEIASSGMRNEVKDVKLLQGDVSEAWREGDVEYATVAIR 299
Query: 182 GQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
I D++ ++ +P+ + +++WTF R W+L + + E
Sbjct: 300 YSAIDVMLDRNTGAVVEGNPDEPVESVELWTFTR---TDGGEWLLAAIQGTE 348
>gi|260459996|ref|ZP_05808249.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
opportunistum WSM2075]
gi|259034207|gb|EEW35465.1| import inner membrane translocase subunit Tim44 [Mesorhizobium
opportunistum WSM2075]
Length = 326
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 4/119 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++F A+ + + ++ L+ + S + + I + E++
Sbjct: 211 VQEAFGREDHAALRRATTPEMVSYLSEELADNAQKGLRNEVSDITLLQADIAESWREDDR 270
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T + + ++ + D + + ++WTF+R NW L + +
Sbjct: 271 DYATAALRYESRDVMRERASGKAVEGDDDHPTETTELWTFMRENGS---NWKLSAIQQA 326
>gi|288959507|ref|YP_003449848.1| hypothetical protein AZL_026660 [Azospirillum sp. B510]
gi|288911815|dbj|BAI73304.1| hypothetical protein AZL_026660 [Azospirillum sp. B510]
Length = 365
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 21/227 (9%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
++++F F + R + + + + L +
Sbjct: 155 IILVVFLVRLAMRFFRNRS--------QTANTAASGSGPLGGNQPAYAGGPLNRDAADVG 206
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE----AIVDSFFEGKVHAI 126
+ + G R + P DF S+E I ++ V A+
Sbjct: 207 YNPMGNHGMGGGNAGPAPRRQAADEIGIQPADF-----ESFERLLTTIQTAYGREDVEAL 261
Query: 127 EKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS 186
+ + ++ F+D L+ ++ K S V + + E Y T+ + I
Sbjct: 262 RGVTTAEMFSYFSDDLAGNRNRGLVNKVSDVRLLQGDLAEGWREGPQEYATVAMRFSLID 321
Query: 187 ASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ ++ ++ + + ++WTFVR W L + +
Sbjct: 322 VTVERASGRVVEGNASQPTEATELWTFVRQHGGQ---WRLSAIQQTH 365
>gi|307728446|ref|YP_003905670.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1003]
gi|307582981|gb|ADN56379.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1003]
Length = 330
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 75/219 (34%), Gaps = 22/219 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
I++ A + +R +G+K +P S G + +
Sbjct: 129 IIVIALLAMIGIWLIRRFMGRKRDASQPAYA------GQSPSLNSGATGYTQEPRYTAPP 182
Query: 73 SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ + L P G L + SV FD + FL A+ + + ++ G + I +
Sbjct: 183 AGSYLEPQGNPLTTPSVGATPSVPAGFDSEAFLRNAKVYFVRLQAAWDVGNIEDIREFTT 242
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ + L++R S ++ ++ +V ++ ++ N + ++R G +
Sbjct: 243 PEMFAEVRVDLASRGS--ESNQTDVVQLN-ADLLGVEERANEYFASVRFSG----LIREA 295
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+++W + W+L +
Sbjct: 296 LGAPAE-------PFVEVWNLSKANRAGE-GWLLAGIQQ 326
>gi|306844172|ref|ZP_07476765.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO1]
gi|306275447|gb|EFM57184.1| import inner membrane translocase subunit Tim44 [Brucella sp. BO1]
Length = 342
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 12/228 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +R ++ + + S+ G+G
Sbjct: 126 MFGLILQVAVIALIAMFV---MRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQG 182
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
S+N V + + V + D F I ++ A
Sbjct: 183 SFSGRTPSVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGAYGREDYAA 237
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ KL + L S K + V + + A E N Y T+ + I
Sbjct: 238 LRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAI 297
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ ++ +P + +++WTF R + W L + + E
Sbjct: 298 DVMVDRTSGAIVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 342
>gi|293609901|ref|ZP_06692203.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828353|gb|EFF86716.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123134|gb|ADY82657.1| hypothetical protein BDGL_002071 [Acinetobacter calcoaceticus
PHEA-2]
Length = 323
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 26/226 (11%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKK---TGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
+LL A + FFVF + LG K GN P++ +G+ F + G
Sbjct: 119 IWVLLAAALAFFVFRK----LGSKKKLAGN-NPYAPNSNGQNPFGRSAAPQAAPRNAGDN 173
Query: 68 KDNL-DSINELFPIGTRLNKVMRDIVSVYTDFD-PKDFLNEARNSYEAIVDSFFEGKVHA 125
+ S+ V + D P FL AR + I +
Sbjct: 174 TNIFGQSVGGGAATQAPFGGVTTSNGNQLPDGSEPAAFLRIARQRFNHIQSMNTASNIEE 233
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + + +Y + + + + + ++ M + +A+ E +++R
Sbjct: 234 IRRYLTPELYSSMYNDIMENQDQDV---AEFSNLNAMVVDSAT-ENGQYVVSVRF----- 284
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ +WV+ +
Sbjct: 285 ------TGTVSEDLNSLPQPFTEIWHFVKPAGSQQ-DWVVAGIQQA 323
>gi|329114644|ref|ZP_08243403.1| Import Inner Membrane Translocase Subunit [Acetobacter pomorum
DM001]
gi|326696124|gb|EGE47806.1| Import Inner Membrane Translocase Subunit [Acetobacter pomorum
DM001]
Length = 337
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + + A++++ + FN+ LS S S V + A E
Sbjct: 220 IQTAWNQQNIPAMQQMATPEMVSYFNEQLSALASQGARNVVSDVHFIQGDLAEAWRENGM 279
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ T+ + I + + +I + ++WTF R P W+L + +
Sbjct: 280 DFATVAMRYSLIDLTTNATGQVIQGSSTEPVNITELWTFTR--PSRGGRWLLSAIQQ 334
>gi|289740307|gb|ADD18901.1| mitochondrial ribosomal protein L45 [Glossina morsitans morsitans]
Length = 355
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 23/210 (10%)
Query: 28 RGVLGKKTGNEKPF-----SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGT 82
RGVL + E+PF G F +R II+ K+K +
Sbjct: 82 RGVLPPRPWLERPFHISCTGGIFEPYVPPEGDGKRSIISAAGAKQKFVF------LEKKS 135
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+ +R I + DF DF A++ Y + H + +LV R Y + ++
Sbjct: 136 KSMLAVRKIRNYEEDFSTDDFAAAAQDVYIGAHQTMALKDKHKLRELVTERCYPEIMHNV 195
Query: 143 STRKSNEKNVKSSLV------GIDDMKIINASIEEN-TVYITIRIVGQFISASYDKDNLL 195
+K + S + + ++ + +EN IT+R Q + A YD+ L
Sbjct: 196 -----RDKTIHWSFLKSLEPPYVVHARVTDVISKENLFAQITVRFHTQQLLAIYDRFGRL 250
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ + V++ F ++I W L
Sbjct: 251 MHGSEIVAKDVLEYAVFEKHISNEYGKWRL 280
>gi|182677331|ref|YP_001831477.1| import inner membrane translocase subunit Tim44 [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182633214|gb|ACB93988.1| import inner membrane translocase subunit Tim44 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 321
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 27/212 (12%)
Query: 22 FVFLQLRGVLG-KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPI 80
F+ +L V+G + + + G G + + G G G ++ PI
Sbjct: 132 FLLFKL--VMGFLRNRQQPAYQGADQGGQAPGNQPQGGNFGFGGGPGPGRAGVNDQPLPI 189
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T ++ I SF ++ + L + F +
Sbjct: 190 ETADYTAFEQKLAA-------------------IQSSFSNEDLNGLRLLTTPEMASYFAE 230
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINA--SIEENTVYITIRIVGQFISASYDKDNLLISS 198
++ + K S V + + A + +R ++S
Sbjct: 231 EIAGNATKGFVNKISDVKLLQGDVAEAWREANGEYATVAMRFSLTDRMIER-ASGRIVSG 289
Query: 199 DPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+V +IWTF R + + +W L + +
Sbjct: 290 --GTPEQVTEIWTFFRPLGATPADWKLAAIQQ 319
>gi|303248706|ref|ZP_07334959.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
fructosovorans JJ]
gi|302489871|gb|EFL49799.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
fructosovorans JJ]
Length = 303
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 30/219 (13%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
L+ F+ + LG++ + + S + + +
Sbjct: 114 LILIGGGLFLLFRF---LGRR---------RMASQSGPSMARTYEASPMREAAGSGWANL 161
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
+ +V FD +DFL+ A+ + + S+ V I
Sbjct: 162 GAASSGPQAQAASG----PNVPPGFDVEDFLSGAKTLFGRLQRSWSARDVSDIATFATP- 216
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
F + + + + + N + + V + D K++ T +
Sbjct: 217 ---AFMEDVRRQAAEDPNPEPTDVLLVDAKLLEVRKMGETTIASAYFDTLMR-------E 266
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ PE V +IW F R NW L + + E
Sbjct: 267 DPKAGQPEQ---VREIWHFARRDDVPGDNWRLDAIQQLE 302
>gi|303327521|ref|ZP_07357962.1| Tim44 domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302862461|gb|EFL85394.1| Tim44 domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 310
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 77/231 (33%), Gaps = 27/231 (11%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
MD +L+F + +F + R ++ + D R +G
Sbjct: 99 MDIIIIGLLVFLGLK--LFARFRN---RQAPAPAGAGAQGASTMGGLHGDLREDSASSQG 153
Query: 66 KKKDNLDS---INELFPIGTRL-NKVMRDIVSVY--TDFDPKDFLNEARNSYEAIVDSFF 119
++DN + + P G + SV FD +FL A+ +Y + +S+
Sbjct: 154 MRRDNAAAGWDVLRNAPQGGAGQAQAFDAAPSVDVPQGFDVDEFLRGAKMAYSRLQNSWD 213
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+ + I + V ++ + E ++ V + + +++ + + +
Sbjct: 214 KRDLDDIAQFATPAVLD----AVREQLEAEPTPSTTEVLLVNAQLLGVENDGDEQRAQVF 269
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D + V ++W FVR I +W L +
Sbjct: 270 FDVLMRESP----------DQQAPSSVREVWHFVRPIAGG--SWKLDGIQQ 308
>gi|330993425|ref|ZP_08317360.1| hypothetical protein SXCC_03323 [Gluconacetobacter sp. SXCC-1]
gi|329759455|gb|EGG75964.1| hypothetical protein SXCC_03323 [Gluconacetobacter sp. SXCC-1]
Length = 324
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + V A++ + + FN+ LS S S + + ++ + E
Sbjct: 207 IQTAWSQQNVAAMQHMATPEMVSYFNNQLSELASRGARNVVSDIRFERGDLVESWRENGM 266
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ + I + D +I DP V ++WTFVR W+L + +
Sbjct: 267 DYATVAMQYSMIDITTDMTGRVIDGDPANRTTVAELWTFVRAAGTG--TWLLSAIQQ 321
>gi|194746347|ref|XP_001955642.1| GF18867 [Drosophila ananassae]
gi|190628679|gb|EDV44203.1| GF18867 [Drosophila ananassae]
Length = 360
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 27/212 (12%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 92 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISSSGAKQKL-----EFLEKKSK 146
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS---FFEGKVHAIEKLVDSRVYQDFND 140
+R I S F +F EA+ Y + + + I + V R Y +
Sbjct: 147 SLMAVRKIRSYEESFSSDEFGAEAQEIY---IKAHQHMAAKDKYQIREYVSERCYPEMMH 203
Query: 141 SLSTRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDN 193
++ K ++ + ++ ++++A + E +T+R Q + A YD+
Sbjct: 204 NVKD-----KTIRWRFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHSQQMLAIYDRFG 258
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
L+ + V++ F ++I W L
Sbjct: 259 RLMHGSEILTKDVLEYVVFEKHISNEYGKWRL 290
>gi|254719318|ref|ZP_05181129.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|265984320|ref|ZP_06097055.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|306839093|ref|ZP_07471910.1| import inner membrane translocase subunit Tim44 [Brucella sp. NF
2653]
gi|264662912|gb|EEZ33173.1| import inner membrane translocase subunit Tim44 [Brucella sp.
83/13]
gi|306405640|gb|EFM61902.1| import inner membrane translocase subunit Tim44 [Brucella sp. NF
2653]
Length = 342
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 12/228 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +R ++ + + S+ G+G
Sbjct: 126 MFGLILQVAVIALIAMFV---MRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQG 182
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
S+N V + + V + D F I ++ A
Sbjct: 183 SFSGRTPSVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGAYGREDYAA 237
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ KL + L S K + V + + A E N Y T+ + I
Sbjct: 238 LRKLTTPEAMSCLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAI 297
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ ++ +P + +++WTF R + W L + + E
Sbjct: 298 DVMVDRTSGAIVEGNPNEPVESVELWTFTRIDGGA---WQLAAIQGTE 342
>gi|195331089|ref|XP_002032235.1| GM26453 [Drosophila sechellia]
gi|194121178|gb|EDW43221.1| GM26453 [Drosophila sechellia]
Length = 362
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 94 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISTSGAKQK-----FEFLEKKSK 148
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S +F DF EA++ Y + I + V R Y + ++
Sbjct: 149 SLMAVRKIRSYDENFRSDDFGAEAQDIYIQAHTHMAAKDKYKIREFVSERCYPEMMHNVK 208
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLI 196
K ++ + ++ ++++A + E +T+R Q + A YD+ L+
Sbjct: 209 D-----KTIRWKFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLM 263
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
I V++ F ++I W L
Sbjct: 264 HGSEIITKDVLEYVVFEKHISNEYGKWRL 292
>gi|58040295|ref|YP_192259.1| putative transmembrane protein [Gluconobacter oxydans 621H]
gi|58002709|gb|AAW61603.1| Putative transmembrane protein [Gluconobacter oxydans 621H]
Length = 316
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + A+ + + FN LS S S V + A E N
Sbjct: 200 IQAAWSAQNMRALASMATPEMTGYFNAQLSDLASRGARNIVSNVQFQRGDLSEAWREGNL 259
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ + + D +I V ++WTFVR NW+L + +
Sbjct: 260 TYATVAMRYSMTDVTTDSMGNVIDGSSTEPVTVTELWTFVRADGRG--NWILSAIQQA 315
>gi|15965783|ref|NP_386136.1| putative transmembrane protein [Sinorhizobium meliloti 1021]
gi|15075052|emb|CAC46609.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
Length = 276
Score = 65.7 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 4/120 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ A+ +L + LS + + V + + A E +
Sbjct: 159 VQAAYGAEDYAALRRLTTPEAMSYLAEELSDNATKGLKNEVRDVHLVQGDLAEAWKENGS 218
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Y T+ + + + D+ ++S D + + ++IWTF R W + + + E
Sbjct: 219 DYATVAMRYESVDVVRDRATGRVVSGDADRPTEAVEIWTFQRKPGAD---WQVSAIQGVE 275
>gi|221211249|ref|ZP_03584228.1| Tim44 domain protein [Burkholderia multivorans CGD1]
gi|221168610|gb|EEE01078.1| Tim44 domain protein [Burkholderia multivorans CGD1]
Length = 340
Score = 65.7 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 73/237 (30%), Gaps = 33/237 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE-RGIIT 61
F M S +I L A I +R + ++ +P +S S +
Sbjct: 124 FAGMMSNLIVIALLAMIG---IWLVRKFMNRR----RPQEPAYSVGSAPSSSGGYAQSPS 176
Query: 62 LGKGKKKDNLDSINELFPIGTRL--------NKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
G S + R+ V V FD FL A+ S+
Sbjct: 177 FQPGSTSQYSGSGSNYANEAQRVFNGGAPAAGAAAAAPVQVPAGFDTDAFLRSAKVSFVR 236
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ +G + I + ++ + L +R + ++ +V + D +++
Sbjct: 237 LQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNEPNQTDVVQL-DAELVALEDRGIE 293
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R L+ S ++W ++ W+L +
Sbjct: 294 QSASVRF-----------HGLIRESSNAAAEPFDEVWNLSKSGGQG---WLLAGIQQ 336
>gi|33146500|dbj|BAC79609.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50510250|dbj|BAD31456.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 353
Score = 65.7 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
T + K+F ++A Y+ + G ++ K++ R++ + L R+S +V
Sbjct: 206 TGYTKKEFYDQAFKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKKRQSMWSSVHWE 265
Query: 156 LV---------GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
LV + + +++ + +T+ V + +Y+ ++S D +
Sbjct: 266 LVEPAVCIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNTKGEVVSGDKSKELII 325
Query: 207 IDIWT 211
+WT
Sbjct: 326 --VWT 328
>gi|92115162|ref|YP_575090.1| import inner membrane translocase, subunit Tim44 [Chromohalobacter
salexigens DSM 3043]
gi|91798252|gb|ABE60391.1| import inner membrane translocase, subunit Tim44 [Chromohalobacter
salexigens DSM 3043]
Length = 272
Score = 65.3 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 65/218 (29%), Gaps = 44/218 (20%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
ILL A I +F F LR ++ G +++ + T
Sbjct: 95 ILLVALIAWFAFRLLRA---RRV-------ATSEGPQHQARQPHQEATTTSPFSSAGTSM 144
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ P FD + FL A+ + + ++ + I++ V
Sbjct: 145 PSSGATPE----------------WFDKERFLGGAKEHFMTLQRAWDNNDLARIQEYVTP 188
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+Y R N ++ +V + ++ + ++ G D++
Sbjct: 189 TLYNLLR---EERAQQPANNRTEIVRLF-AELGDVREIGQQAEASVLFHG-----VLDEN 239
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + W +R++ P W + +
Sbjct: 240 GER--------NEFNETWHLIRDLREGAP-WYVQGIEQ 268
>gi|302848231|ref|XP_002955648.1| hypothetical protein VOLCADRAFT_106869 [Volvox carteri f.
nagariensis]
gi|300259057|gb|EFJ43288.1| hypothetical protein VOLCADRAFT_106869 [Volvox carteri f.
nagariensis]
Length = 296
Score = 65.3 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
F D + +Y+++ + G + E V + ++ R+ V+ +
Sbjct: 143 GFSKTDLQSRVLAAYKSVNLAIATGDMRYAEPFVTESMLLRLTGEVT-RRGRAARVEWRM 201
Query: 157 VG---IDDMKIINASIEEN--------TVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
V D+K++ ++ +N V T R+ + + A YD LI+ DP
Sbjct: 202 VSEPDPRDIKLVCGTVVQNPLKQGRLHFVQWTARVPSRQVVAVYDARGNLIAGDPHKELD 261
Query: 206 VIDIWTFVRNIPPSNPNWVLISTKLG 231
V+D W F R I + L++ + G
Sbjct: 262 VVDYWVFERPILKA-----LVAPRPG 282
>gi|150397061|ref|YP_001327528.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
medicae WSM419]
gi|150028576|gb|ABR60693.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
medicae WSM419]
Length = 333
Score = 65.3 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 59/198 (29%), Gaps = 12/198 (6%)
Query: 37 NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT 96
N++P S S + + P +I
Sbjct: 145 NQRPAYSAPSATARTSATAGNPPSFRIPRIGEAVGSAAAPRSPAAAPAYGGGEEISVGQD 204
Query: 97 DFDP-KDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
D D + L + +Y A+ +L + LS + +
Sbjct: 205 DLDRFETMLKGVQAAYG-------AEDYAALRRLTTPEAMSYLAEELSDNATKGLKNEVR 257
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVR 214
V + + A + Y T+ + + + D+ ++S D + + ++IWTFVR
Sbjct: 258 DVHLVQGDLAEAWRGDGRDYATVAMRYESVDVMRDRATGDVVSGDADRPTEAVEIWTFVR 317
Query: 215 NIPPSNPNWVLISTKLGE 232
W + + + E
Sbjct: 318 RPGAD---WQVSAIQGVE 332
>gi|307311318|ref|ZP_07590961.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti BL225C]
gi|307318851|ref|ZP_07598283.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti AK83]
gi|306895572|gb|EFN26326.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti AK83]
gi|306899619|gb|EFN30247.1| import inner membrane translocase subunit Tim44 [Sinorhizobium
meliloti BL225C]
Length = 337
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 4/120 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ A+ +L + LS + + V + + A E +
Sbjct: 220 VQAAYGAEDYAALRRLTTPEAMSYLAEELSDNATKGLKNEVRDVHLVQGDLAEAWKENGS 279
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Y T+ + + + D+ ++S D + + ++IWTF R W + + + E
Sbjct: 280 DYATVAMRYESVDVVRDRATGRVVSGDADRPTEAVEIWTFQRKPGAD---WQVSAIQGVE 336
>gi|258542756|ref|YP_003188189.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01]
gi|256633834|dbj|BAH99809.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01]
gi|256636893|dbj|BAI02862.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-03]
gi|256639946|dbj|BAI05908.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-07]
gi|256643002|dbj|BAI08957.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-22]
gi|256646057|dbj|BAI12005.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-26]
gi|256649110|dbj|BAI15051.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-32]
gi|256652097|dbj|BAI18031.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655154|dbj|BAI21081.1| mitochondrial import inner membrane translocase subunit Tim44
[Acetobacter pasteurianus IFO 3283-12]
Length = 323
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + + A++++ + FN+ LS S S V + A E
Sbjct: 206 IQTAWNQQNIAAMQQMATPEMVSYFNEQLSALASQGARNVVSDVHFIQGDLAEAWRENGM 265
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ T+ + I + + +I + ++WTF R P W+L + +
Sbjct: 266 DFATVAMRYSLIDLTTNAMGQVIQGSSTEPVNITELWTFTR--PSRGGRWLLSAIQQ 320
>gi|195158248|ref|XP_002020004.1| GL13752 [Drosophila persimilis]
gi|194116773|gb|EDW38816.1| GL13752 [Drosophila persimilis]
Length = 352
Score = 64.9 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 85 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISSSGAKQKL-----EFLEKKSK 139
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S F F EA+ Y A + + I + V R Y + ++
Sbjct: 140 SLIAVRKIRSYDESFSSDQFGAEAQEIYVAAHTLMAAKEKYKIREYVSERCYPEMMHNVK 199
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINAS------IEENTVYITIRIVGQFISASYDKDNLLI 196
K + + ++ ++++A E +T+R Q + A YD+ L+
Sbjct: 200 D-----KTIHWRFLQSLEPPRVVHARCTEVITKENQFAQVTVRFHTQQMLAIYDRFGRLM 254
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 255 HGSEILTKDVLEYVVFEKHISNEYGKWRL 283
>gi|125773335|ref|XP_001357926.1| GA19976 [Drosophila pseudoobscura pseudoobscura]
gi|54637660|gb|EAL27062.1| GA19976 [Drosophila pseudoobscura pseudoobscura]
Length = 352
Score = 64.9 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 85 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISSSGAKQKL-----EFLEKKSK 139
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S F F EA+ Y A + + I + V R Y + ++
Sbjct: 140 SLIAVRKIRSYDESFSSDQFGAEAQEIYVAAHTLMAAKEKYKIREYVSERCYPEMMHNVK 199
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINAS------IEENTVYITIRIVGQFISASYDKDNLLI 196
K + + ++ ++++A E +T+R Q + A YD+ L+
Sbjct: 200 D-----KTIHWRFLQSLEPPRVVHARCTEVITKENQFAQVTVRFHTQQMLAIYDRFGRLM 254
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 255 HGSEILTKDVLEYVVFEKHISNEYGKWRL 283
>gi|161523748|ref|YP_001578760.1| import inner membrane translocase subunit Tim44 [Burkholderia
multivorans ATCC 17616]
gi|189351491|ref|YP_001947119.1| hypothetical protein BMULJ_02693 [Burkholderia multivorans ATCC
17616]
gi|221200067|ref|ZP_03573110.1| Tim44 domain protein [Burkholderia multivorans CGD2M]
gi|221206780|ref|ZP_03579792.1| Tim44 domain protein [Burkholderia multivorans CGD2]
gi|160341177|gb|ABX14263.1| import inner membrane translocase subunit Tim44 [Burkholderia
multivorans ATCC 17616]
gi|189335513|dbj|BAG44583.1| putative membrane protein [Burkholderia multivorans ATCC 17616]
gi|221173435|gb|EEE05870.1| Tim44 domain protein [Burkholderia multivorans CGD2]
gi|221180306|gb|EEE12710.1| Tim44 domain protein [Burkholderia multivorans CGD2M]
Length = 340
Score = 64.9 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 74/237 (31%), Gaps = 33/237 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDE-RGIIT 61
F M S +I L A I +R + ++ +P +S S +
Sbjct: 124 FAGMMSNLIVIALLAMIG---IWLVRKFMNRR----RPQEPAYSVGSAPSSSGGYAQSPS 176
Query: 62 LGKGKKKDNLDSINELFPIGTRL--------NKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
G S + R+ V V FD FL A+ S+
Sbjct: 177 FQPGSTSQYSGSGSNYANEAQRVFNGGAPAAGAAAAAPVQVPAGFDTDAFLRSAKVSFVR 236
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ +G + I + ++ + L +R + ++ +V + D +++
Sbjct: 237 LQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNEPNQTDVVQL-DAELVALEDRGIE 293
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + ++W ++ W+L +
Sbjct: 294 QSASVRFHG-LIRESANAAAEPFD----------EVWNLSKSGGQG---WLLAGIQQ 336
>gi|23502145|ref|NP_698272.1| hypothetical protein BR1269 [Brucella suis 1330]
gi|163843532|ref|YP_001627936.1| import inner membrane translocase subunit Tim44 [Brucella suis ATCC
23445]
gi|225852763|ref|YP_002732996.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis ATCC 23457]
gi|254702005|ref|ZP_05163833.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|254704546|ref|ZP_05166374.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|254706558|ref|ZP_05168386.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
gi|254710332|ref|ZP_05172143.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|256031826|ref|ZP_05445440.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|256044910|ref|ZP_05447814.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|256160005|ref|ZP_05457714.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
gi|256255226|ref|ZP_05460762.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|256263752|ref|ZP_05466284.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 2 str. 63/9]
gi|256369690|ref|YP_003107200.1| Tim44 domain-containing protein [Brucella microti CCM 4915]
gi|260168960|ref|ZP_05755771.1| Tim44 domain-containing protein [Brucella sp. F5/99]
gi|260565489|ref|ZP_05835973.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. 16M]
gi|261222423|ref|ZP_05936704.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|261314017|ref|ZP_05953214.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
gi|261317896|ref|ZP_05957093.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|261752572|ref|ZP_05996281.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|261755230|ref|ZP_05998939.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|261758453|ref|ZP_06002162.1| import inner membrane translocase subunit Tim44 [Brucella sp.
F5/99]
gi|265988925|ref|ZP_06101482.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|265991338|ref|ZP_06103895.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|265998390|ref|ZP_06110947.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
gi|294852604|ref|ZP_06793277.1| import inner membrane translocase subunit Tim44 [Brucella sp. NVSL
07-0026]
gi|23348108|gb|AAN30187.1| conserved hypothetical protein [Brucella suis 1330]
gi|163674255|gb|ABY38366.1| import inner membrane translocase subunit Tim44 [Brucella suis ATCC
23445]
gi|225641128|gb|ACO01042.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis ATCC 23457]
gi|255999852|gb|ACU48251.1| Tim44 domain-containing protein [Brucella microti CCM 4915]
gi|260151557|gb|EEW86651.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. 16M]
gi|260921007|gb|EEX87660.1| import inner membrane translocase subunit Tim44 [Brucella ceti
B1/94]
gi|261297119|gb|EEY00616.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis B2/94]
gi|261303043|gb|EEY06540.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M163/99/10]
gi|261738437|gb|EEY26433.1| import inner membrane translocase subunit Tim44 [Brucella sp.
F5/99]
gi|261742325|gb|EEY30251.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
5 str. 513]
gi|261744983|gb|EEY32909.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
3 str. 686]
gi|262552858|gb|EEZ08848.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M490/95/1]
gi|263002122|gb|EEZ14697.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 1 str. Rev.1]
gi|263093810|gb|EEZ17815.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 2 str. 63/9]
gi|264661122|gb|EEZ31383.1| import inner membrane translocase subunit Tim44 [Brucella
pinnipedialis M292/94/1]
gi|294821193|gb|EFG38192.1| import inner membrane translocase subunit Tim44 [Brucella sp. NVSL
07-0026]
gi|326409290|gb|ADZ66355.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis M28]
gi|326539001|gb|ADZ87216.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis M5-90]
Length = 342
Score = 64.9 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 70/228 (30%), Gaps = 12/228 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +R ++ + + S+ G+G
Sbjct: 126 MFGLILQVAVIALIAMFV---MRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQG 182
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
S+N V + + V + D F I + A
Sbjct: 183 SFSGRTPSVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGGYGREDYAA 237
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ KL + L S K + V + + A E N Y T+ + I
Sbjct: 238 LRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAI 297
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ ++ +P + +++WTF R + W L + + E
Sbjct: 298 DVMVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 342
>gi|254714328|ref|ZP_05176139.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
gi|254717227|ref|ZP_05179038.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261219045|ref|ZP_05933326.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261322105|ref|ZP_05961302.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
gi|260924134|gb|EEX90702.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M13/05/1]
gi|261294795|gb|EEX98291.1| import inner membrane translocase subunit Tim44 [Brucella ceti
M644/93/1]
Length = 342
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 70/228 (30%), Gaps = 12/228 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +R ++ + + S+ G+G
Sbjct: 126 MFGLILQVAVIALIAMFV---MRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQG 182
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
S+N V + + V + D F I + A
Sbjct: 183 SFSGRTPSVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGGYGREDYAA 237
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ KL + L S K + V + + A E N Y T+ + I
Sbjct: 238 LRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAI 297
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ ++ +P + +++WTF R + W L + + E
Sbjct: 298 DVMVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 342
>gi|161619220|ref|YP_001593107.1| import inner membrane translocase subunit Tim44 [Brucella canis
ATCC 23365]
gi|260566211|ref|ZP_05836681.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
4 str. 40]
gi|161336031|gb|ABX62336.1| import inner membrane translocase subunit Tim44 [Brucella canis
ATCC 23365]
gi|260155729|gb|EEW90809.1| import inner membrane translocase subunit Tim44 [Brucella suis bv.
4 str. 40]
Length = 342
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 70/228 (30%), Gaps = 12/228 (5%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + + A I FV +R ++ + + S+ G+G
Sbjct: 126 MFGLILQVAVIALIAMFV---MRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQG 182
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
S+N V + + V + D F I + A
Sbjct: 183 SFSGRTPSVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGGYGREDYAA 237
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ KL + L S K + V + + A E N Y T+ + I
Sbjct: 238 LRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAI 297
Query: 186 SASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D+ ++ +P + +++WTF R + W L + + E
Sbjct: 298 DVMVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 342
>gi|209542494|ref|YP_002274723.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530171|gb|ACI50108.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 320
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 2/118 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + + A++ + + FN LS S S V + + A E
Sbjct: 204 IQAAWSQRNLPALQHMATPEMVGYFNAQLSDLASRGARNVVSDVRFEQGDLSEAWSENGF 263
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ + + + D +I V ++WTFVR W+L + + G
Sbjct: 264 DYATVAMRYSMVDITTDMTGRVIDGSSTERVMVTELWTFVRPTRGG--AWLLSAIQQG 319
>gi|134096015|ref|YP_001101090.1| hypothetical protein HEAR2855 [Herminiimonas arsenicoxydans]
gi|133739918|emb|CAL62969.1| conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 315
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 23/230 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQL---RGVLGKKTGNEKP-FSGFFSGKYVFSKRDERGIIT 61
M S ++ LFAF F+ ++ + G + GN++ F +
Sbjct: 103 MISTMLMVGLFAFAAMFI-YRMIKAKSA-GAQAGNQRNGLQPSFPNNFSEKSSTPEIGSR 160
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ + + + G+ + + DFD + F+ A+ + + ++ +
Sbjct: 161 IEQPYGQPSALQSAAPLASGSAFGAGIDAANDLPADFDVESFVRNAKTYFIRLQAAWDKA 220
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTR-KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
V+ I + ++ + L R S SL GI + +I+
Sbjct: 221 DVNDIREFTTPEMFAELKAQLLERGASENHTDVISLEGI----FYGVETVGDDYIASIKF 276
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
L+ + W + + + WVL +
Sbjct: 277 -----------TGLINEGAGAPTEPFSEAWNLSKPVH-GDGGWVLAGIQQ 314
>gi|15604299|ref|NP_220815.1| hypothetical protein RP434 [Rickettsia prowazekii str. Madrid E]
gi|6226372|sp|O05965|Y434_RICPR RecName: Full=Uncharacterized protein RP434
gi|2073499|emb|CAA72444.1| hypothetical protein [Rickettsia prowazekii]
gi|3860991|emb|CAA14891.1| unknown [Rickettsia prowazekii]
gi|292572048|gb|ADE29963.1| hypothetical protein rpr22_CDS424 [Rickettsia prowazekii Rp22]
Length = 212
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 20/144 (13%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+ I FDP F+N A+ +++ I+++ ++ V + +L+D R ++F +
Sbjct: 87 DGIEQIHKRLYSFDPVKFINNAKTAFQMIIEAAYKKDVKELSELIDKRYLEEFEKIIP-- 144
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
S SS + K + N ++I + G+ ++
Sbjct: 145 -SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLLFQGK----------NVVD----KIED 186
Query: 206 VIDIWTFVRNIPPSNPNWVLISTK 229
+ + WTF RN +W L + +
Sbjct: 187 LQEEWTFTRNANTKEVDWFLSNIE 210
>gi|284043595|ref|YP_003393935.1| import inner membrane translocase subunit Tim44 [Conexibacter
woesei DSM 14684]
gi|283947816|gb|ADB50560.1| import inner membrane translocase subunit Tim44 [Conexibacter
woesei DSM 14684]
Length = 216
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 58/163 (35%), Gaps = 4/163 (2%)
Query: 58 GIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
+ + + P+ ++ + I FDP F A ++ A+ +
Sbjct: 27 DVTVMANEPLAGGSTDAAVVSPLAP--DEGIALIRRADPAFDPAGFERRAEQAFLALGQA 84
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
+ + A L+ +++ ++ ++ K + +D + + +T
Sbjct: 85 WQDRDREAARPLMSPGLHKSWSANVQMFVDEHKRNVLEGMRVDSLAPVKVVHGNAFDALT 144
Query: 178 IRIVGQFISASYD-KDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
+R +IS D + + +I+ D + +TF R++
Sbjct: 145 VRFTATWISYEVDERTDRVIAGD-RTPQSFTEFFTFQRSVDAR 186
>gi|258597316|ref|XP_001347936.2| mitochondrial inner membrane translocase subunit TIM44, putative
[Plasmodium falciparum 3D7]
gi|254832659|gb|AAN35849.2| mitochondrial inner membrane translocase subunit TIM44, putative
[Plasmodium falciparum 3D7]
Length = 470
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVYQ 136
T L +R++ + +F + + +E IV+S+ G + S +
Sbjct: 309 TELAAALREMKMIDKNFKLSELM----YLFEYVISKHIVESYLIGDEETLRLHCGSSAFN 364
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLL 195
N S++ RK + + ++++ + ++ A +EE++ + Q I+ +K++ +
Sbjct: 365 SLNASITERKKKKVFLDTNVLIYKNHELKGAQRMEESSPWFIFTFHTQQINCLKNKNDEI 424
Query: 196 ISSDPEIFGKV 206
I + +V
Sbjct: 425 IEGKIDDIREV 435
>gi|238028618|ref|YP_002912849.1| hypothetical protein bglu_1g30820 [Burkholderia glumae BGR1]
gi|237877812|gb|ACR30145.1| Hypothetical protein bglu_1g30820 [Burkholderia glumae BGR1]
Length = 348
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 69/244 (28%), Gaps = 37/244 (15%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L AF ++ +L G++ ++P
Sbjct: 122 FAGMMANLIVIALLAFAGIWLVRKLMN-RGRR---QEPAYAGSGASMNRGYDGAASGGYA 177
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVM----------------RDIVSVYTDFDPKDFLNE 106
+ +V + V FD + F+
Sbjct: 178 AGNATYSSAPQPASSSNYANEAARVFGGGAAAGAVNDAVGSASAVPQVPAGFDTEAFVRN 237
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
A+ + + ++ +G + I + ++ + L +R + + ++ +V I D ++
Sbjct: 238 AKVYFVRLQAAWDQGNLADIREFTTPEMFAEVKIDLDSRGAGKN--QTDVVQI-DADLLG 294
Query: 167 ASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
+ ++R G + ++W N W+L
Sbjct: 295 VEQRGSLSEASVRFHG----MIRENPGAPAE-------PFEEVWNL---TKSGNEGWLLA 340
Query: 227 STKL 230
+
Sbjct: 341 GIQQ 344
>gi|162147875|ref|YP_001602336.1| hypothetical protein GDI_2091 [Gluconacetobacter diazotrophicus PAl
5]
gi|161786452|emb|CAP56034.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 324
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 2/118 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + + A++ + + FN LS S S V + + A E
Sbjct: 208 IQAAWSQRNLPALQHMATPEMVGYFNAQLSDLASRGARNVVSDVRFEQGDLSEAWSENGF 267
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ + + + D +I V ++WTFVR W+L + + G
Sbjct: 268 DYATVAMRYSMVDITTDMTGRVIDGSSTERVMVTELWTFVRPTRGG--AWLLSAIQQG 323
>gi|70943748|ref|XP_741884.1| mitochondrial import inner membrane translocase, [Plasmodium
chabaudi chabaudi]
gi|56520543|emb|CAH80928.1| mitochondrial import inner membrane translocase, putative
[Plasmodium chabaudi chabaudi]
Length = 367
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVYQ 136
T L +R + +F + + +E IV+S+ G + +
Sbjct: 206 TELAAALRVMKMEDKNFKLSELM----YLFEFVISKHIVESYLIGDEETLRLHCGQAAFN 261
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLL 195
N S++ RK + + ++++ D ++ A +EE++ + Q I+ +K++ +
Sbjct: 262 SLNSSINERKKKKLFLDTNVLIYKDHELKGAQRMEESSPWFIFTFHTQQINCLKNKNDEI 321
Query: 196 ISSDPEIFGKV 206
+ + +V
Sbjct: 322 VEGKIDDIREV 332
>gi|317153060|ref|YP_004121108.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
aespoeensis Aspo-2]
gi|316943311|gb|ADU62362.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
aespoeensis Aspo-2]
Length = 258
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 14/151 (9%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
++ P G V + V FD +FL A+ + +G + + + V
Sbjct: 114 SKDAPEGGAPQAVRQSPAPVPGGFDEAEFLEGAKLFFSRFQQVSGQGDLDQLRGFLSDDV 173
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNL 194
Y+ L+ ++ + + V + D +++ E +IT+ Q
Sbjct: 174 YEQALAGLAAQQ----TIARTEVMLVDARLMERKSEGGRTWITVFYDAQLR--------K 221
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+S D + W F R + W L
Sbjct: 222 GVSGDQPYQLRAA--WEFSRTDAEGSGLWTL 250
>gi|221056238|ref|XP_002259257.1| Mitochondrial import inner membrane translocase [Plasmodium
knowlesi strain H]
gi|193809328|emb|CAQ40030.1| Mitochondrial import inner membrane translocase,putative
[Plasmodium knowlesi strain H]
Length = 467
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVYQ 136
T L +R++ +F + + +E IV+S+ G + +
Sbjct: 306 TELAAALREMKMYDQNFKLSELM----YLFEFVISKHIVESYLIGDEETLRVHCGQSAFN 361
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLL 195
N S++ RK + + ++++ + ++ A +EE++ + Q I+ + ++ +
Sbjct: 362 SLNASINERKKKKVYLDTNVLIYKNHELKGAQRMEESSPWFIFTFHTQQINCLKNANDEI 421
Query: 196 ISSDPEIFGKV 206
I + + +V
Sbjct: 422 IEGNIDDIREV 432
>gi|229365490|dbj|BAH57996.1| hypothetical protein [Acetobacter lovaniensis]
Length = 130
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + + A++++ + FN+ LS S S V + A E
Sbjct: 13 IQTAWNQQNIAAMQQMATPEMVSYFNEQLSALASQGARNVVSDVHFIQGDLAEAWRENGM 72
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ T+ + I + + +I + ++WTF R P W+L + +
Sbjct: 73 DFATVAMRYSLIDLTTNAMGQVIQGSSTEPVNITELWTFTR--PSRGGRWLLSAIQQ 127
>gi|77461866|ref|YP_351373.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
fluorescens Pf0-1]
gi|77385869|gb|ABA77382.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
Length = 292
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
F IL+ A I F +F R + ++ + F+ +R+ G
Sbjct: 103 FDILIMAVIAFVIF---RFIAARR----RKQQEQFAPAGAPMQREVFEQKPAAMGSIFG- 154
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
G+ R +++ F+ + FL AR+ ++A+ + ++ I + V
Sbjct: 155 ----------GSAAPAAARPVINAPAWFNEQRFLEAARSHFQALQQHWDANEMDKIAEFV 204
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
++++ R +S+ + +++ + T+ G ++ +D
Sbjct: 205 TPQMFEFLKR---ERAELGDAFQSTYIDNLQVQLDGVDDRADKTIATLTFNGVSKTSRFD 261
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + S W R + P W++ +
Sbjct: 262 QQGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 290
>gi|68070005|ref|XP_676914.1| mitochondrial import inner membrane translocase, [Plasmodium
berghei strain ANKA]
gi|56496822|emb|CAH94869.1| mitochondrial import inner membrane translocase, putative
[Plasmodium berghei]
Length = 355
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVYQ 136
T L +R + +F + + +E IV+S+ G + +
Sbjct: 194 TELAAALRIMKMDDKNFKLSELM----YLFEFVISKHIVESYLIGDEDTLRLHCGEAAFN 249
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLL 195
N S++ RK + + ++++ + ++ A +EE++ + Q I+ +KD+ +
Sbjct: 250 SLNSSINERKKKKLFLDTNVLIYKNHELKGAQRMEESSPWFIFTFHTQQINCLKNKDDEI 309
Query: 196 ISSDPEIFGKV 206
+ + +V
Sbjct: 310 VEGKIDDIREV 320
>gi|302036897|ref|YP_003797219.1| hypothetical protein NIDE1559 [Candidatus Nitrospira defluvii]
gi|300604961|emb|CBK41294.1| conserved exported protein of unknown function [Candidatus
Nitrospira defluvii]
Length = 343
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 108 RNSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK 163
+ +++ I ++ + + A+ +LV + + F+ L+ + ++D+
Sbjct: 212 KAAFQQSLTDIQTAWGQQDLSALRRLVTPEMLEYFSTGLAE-----LTSQDQANRVEDVV 266
Query: 164 IINASIEENTVYITIRI-------VGQFISASYDK----DNLLISSDPEIFGKVIDIWTF 212
++ A + E+ V T++ + + S K LI E + ++WTF
Sbjct: 267 LLQAEVRESWVENTVQYATVSLHWSARDYTVSLSKAPGDAGYLIEGSAEKPIETTEVWTF 326
Query: 213 VRNIPPSNPNWVLISTKL 230
+R + W+L + +
Sbjct: 327 MR---YQHGKWLLSAIQQ 341
>gi|323524735|ref|YP_004226888.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1001]
gi|323381737|gb|ADX53828.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1001]
Length = 330
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 74/219 (33%), Gaps = 22/219 (10%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+++ A + +R +G+K +P S G + +
Sbjct: 129 VIVIAVLAMIGIWLVRRFMGRKRDASQPAYAGHSPSL------NSGAAGYTQEPRYTAPP 182
Query: 73 SINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+ + L P G L + SV FD FL A+ + + ++ G + I +
Sbjct: 183 TGSYLEPQGNPLTTPSVNATPSVPAGFDSDAFLRNAKVYFVRLQAAWDVGNIDDIREFTT 242
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDK 191
++ + L++R + + ++ +V ++ ++ N + ++R
Sbjct: 243 PEMFAEVRVDLASRGA--EKNQTDVVQLN-ADLLGVEERANEYFASVRFS---------- 289
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
L+ + +++W + W+L +
Sbjct: 290 -GLIREAPGAAAEPFVEVWNLSK-ANRPGEGWLLAGIQQ 326
>gi|261856484|ref|YP_003263767.1| import inner membrane translocase subunit Tim44 [Halothiobacillus
neapolitanus c2]
gi|261836953|gb|ACX96720.1| import inner membrane translocase subunit Tim44 [Halothiobacillus
neapolitanus c2]
Length = 295
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 70/222 (31%), Gaps = 36/222 (16%)
Query: 10 DFLILLFAFITFFVFLQ-LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
DF+I+ + F+ ++ LR S + S T+ +
Sbjct: 103 DFIIIALFALGAFMLIRALR----------------KSSQSAASPYARSTAGTMADQAPQ 146
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ G+ + + F+ FL A+ + + ++ + +++
Sbjct: 147 PSSIGSFSNSSAGSAQA----PLPNAPAWFNEDSFLQGAKAHFTNLQRAWDANDLKTMQE 202
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
++ + R + V + ++++ S E +++ ++ G
Sbjct: 203 YFTPELFLELAR---ERARIGDENNVTEVQSLNAQLLDLSREGDSIVASVLFQG------ 253
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ D + +IW + +W+++ +
Sbjct: 254 ------MVREDYGQPEPIAEIWHVRHTADSAQGDWLIVGIQQ 289
>gi|324517598|gb|ADY46868.1| Import inner membrane translocase subunit tim-44 [Ascaris suum]
Length = 323
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 24/151 (15%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVH 124
+ D I +F + +++V+ +I + FD ++L E I +++F G +
Sbjct: 193 RGVTDRITSVFTTKSEVSEVLTEIAKIDPSFDKVEWLRFCER--EVIPNVLEAFIRGDLK 250
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
++ R Y + K S ++ I ++
Sbjct: 251 ILQDWCHERAYNALAAVVKEYKKVNFSTADSRVIDISKVE------------------AF 292
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVR 214
I+ + + ++ D +V +W R
Sbjct: 293 MINVVKNLEGKVVQGDENNPVRVHHVWVMCR 323
>gi|193078111|gb|ABO13052.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 326
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 70/226 (30%), Gaps = 34/226 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFS--GFFSGKYVFSKRDERGIITLGKGKKKDN 70
+LL A + FFVF +K G++K + ++ R G +
Sbjct: 128 VLLAAAVAFFVF--------RKLGSKKKLAANNPYAPNNGGQNPFGRSAAPTNTGDNTNI 179
Query: 71 LDS-----INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
P G+ + +P FL AR + I +
Sbjct: 180 FGQSVGGGAATQAPFGSATTNSGNQLPD---GSEPASFLRVARQRFNHIQSINSASNIEE 236
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + + +Y + + + + + ++ M + +A+ E +++R
Sbjct: 237 IRRYLTPELYNSMYNDIMENQDQDV---AEFSNLNAMVVDSAT-ENGQYIVSVRF----- 287
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ + +WV+ +
Sbjct: 288 ------TGTVSEDLNSLPQPFTEIWHFVKPVGSQQ-DWVVAGIQQA 326
>gi|169795016|ref|YP_001712809.1| hypothetical protein ABAYE0855 [Acinetobacter baumannii AYE]
gi|184159199|ref|YP_001847538.1| hypothetical protein ACICU_02879 [Acinetobacter baumannii ACICU]
gi|213158321|ref|YP_002320372.1| hypothetical protein AB57_3049 [Acinetobacter baumannii AB0057]
gi|260556495|ref|ZP_05828713.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|301345393|ref|ZP_07226134.1| hypothetical protein AbauAB0_04094 [Acinetobacter baumannii AB056]
gi|301511593|ref|ZP_07236830.1| hypothetical protein AbauAB05_08443 [Acinetobacter baumannii AB058]
gi|301594787|ref|ZP_07239795.1| hypothetical protein AbauAB059_03222 [Acinetobacter baumannii
AB059]
gi|332854286|ref|ZP_08435286.1| hypothetical protein HMPREF0021_02869 [Acinetobacter baumannii
6013150]
gi|332865662|ref|ZP_08436488.1| hypothetical protein HMPREF0020_00093 [Acinetobacter baumannii
6013113]
gi|332876029|ref|ZP_08443815.1| hypothetical protein HMPREF0022_03458 [Acinetobacter baumannii
6014059]
gi|169147943|emb|CAM85806.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|183210793|gb|ACC58191.1| uncharacterized protein conserved in bacteria [Acinetobacter
baumannii ACICU]
gi|213057481|gb|ACJ42383.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
gi|260409754|gb|EEX03054.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|323519143|gb|ADX93524.1| hypothetical protein ABTW07_3101 [Acinetobacter baumannii
TCDC-AB0715]
gi|332728102|gb|EGJ59491.1| hypothetical protein HMPREF0021_02869 [Acinetobacter baumannii
6013150]
gi|332735183|gb|EGJ66263.1| hypothetical protein HMPREF0020_00093 [Acinetobacter baumannii
6013113]
gi|332735895|gb|EGJ66936.1| hypothetical protein HMPREF0022_03458 [Acinetobacter baumannii
6014059]
Length = 325
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 70/226 (30%), Gaps = 34/226 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFS--GFFSGKYVFSKRDERGIITLGKGKKKDN 70
+LL A + FFVF +K G++K + ++ R G +
Sbjct: 127 VLLAAAVAFFVF--------RKLGSKKKLAANNPYAPNNGGQNPFGRSAAPTNTGDNTNI 178
Query: 71 LDS-----INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
P G+ + +P FL AR + I +
Sbjct: 179 FGQSVGGGAATQAPFGSATTNSGNQLPD---GSEPASFLRVARQRFNHIQSINSASNIEE 235
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + + +Y + + + + + ++ M + +A+ E +++R
Sbjct: 236 IRRYLTPELYNSMYNDIMENQDQDV---AEFSNLNAMVVDSAT-ENGQYIVSVRF----- 286
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ + +WV+ +
Sbjct: 287 ------TGTVSEDLNSLPQPFTEIWHFVKPVGSQQ-DWVVAGIQQA 325
>gi|92118080|ref|YP_577809.1| import inner membrane translocase, subunit Tim44 [Nitrobacter
hamburgensis X14]
gi|91800974|gb|ABE63349.1| import inner membrane translocase, subunit Tim44 [Nitrobacter
hamburgensis X14]
Length = 312
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 9/127 (7%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V+ + L + F + L + K S V + +
Sbjct: 189 EAFERLLGEIQTAWSNEDVNTLHTLATPEMVSYFTEDLRANDARGVVNKVSDVKLLQGDL 248
Query: 165 INASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E T Y T+ + I + ++ ++ + +V D+WTF R W
Sbjct: 249 AEAWREGTTDYATVALRYSLIDKTTERASGRVVEGS-DQPQEVTDVWTFARLGGGK---W 304
Query: 224 VLISTKL 230
L + +
Sbjct: 305 ELSAIQQ 311
>gi|126642670|ref|YP_001085654.1| hypothetical protein A1S_2635 [Acinetobacter baumannii ATCC 17978]
Length = 291
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 70/226 (30%), Gaps = 34/226 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFS--GFFSGKYVFSKRDERGIITLGKGKKKDN 70
+LL A + FFVF +K G++K + ++ R G +
Sbjct: 93 VLLAAAVAFFVF--------RKLGSKKKLAANNPYAPNNGGQNPFGRSAAPTNTGDNTNI 144
Query: 71 LDS-----INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
P G+ + +P FL AR + I +
Sbjct: 145 FGQSVGGGAATQAPFGSATTNSGNQLPD---GSEPASFLRVARQRFNHIQSINSASNIEE 201
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + + +Y + + + + + ++ M + +A+ E +++R
Sbjct: 202 IRRYLTPELYNSMYNDIMENQDQDV---AEFSNLNAMVVDSAT-ENGQYIVSVRF----- 252
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ + +WV+ +
Sbjct: 253 ------TGTVSEDLNSLPQPFTEIWHFVKPVGSQQ-DWVVAGIQQA 291
>gi|290983241|ref|XP_002674337.1| predicted protein [Naegleria gruberi]
gi|284087927|gb|EFC41593.1| predicted protein [Naegleria gruberi]
Length = 520
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 10/180 (5%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA- 113
D R K K++++ + M FD L + E
Sbjct: 334 DARTAQEKVKKSKEEDIPDTEADISSTSENALAMGAFKKRDPRFDLDLLL----VTMETL 389
Query: 114 ----IVDSFFEGKVHAIEKLVDSRVY-QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINAS 168
I+ ++F H I+K V Y Q F + R + + ++ ++D+ +
Sbjct: 390 IIPEIMSAYFNDDAHTIKKFVSESCYRQVFFPRIQERVHTKIKYDAKILHVEDVMLYTTR 449
Query: 169 IEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+ + I Q+I ++ ++ P+ K +W ++ +W +
Sbjct: 450 YDAGNPALVISCAVQYIHCMKNEAGEIVEGGPKDIRKENQMWILKQDESQETDDWYVSEV 509
>gi|170743208|ref|YP_001771863.1| import inner membrane translocase subunit Tim44 [Methylobacterium
sp. 4-46]
gi|168197482|gb|ACA19429.1| import inner membrane translocase subunit Tim44 [Methylobacterium
sp. 4-46]
Length = 316
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 18/184 (9%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+R + G + N + +G + P DF ++E
Sbjct: 143 RRRQAEPAMAGGYARSGPPPGPNPMTGLGGGGARPAGPPQRDQVGISPADF-----EAFE 197
Query: 113 ----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINAS 168
I ++ V + +L + F + L + + + V + + A
Sbjct: 198 RSLTQIQLAYGAEDVGTLRRLATPEMAGYFTEELQANAARGVINRIADVKLLQGDLSEAW 257
Query: 169 IEENTVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226
E T Y T+ R + ++ ++ + DPE +IWTF R+ W+L
Sbjct: 258 REGPTDYATVAMRYALRDVTVERGSGRVVANGDPEAV----EIWTFRRDRGGP---WLLS 310
Query: 227 STKL 230
+ +
Sbjct: 311 AIQQ 314
>gi|332374642|gb|AEE62462.1| unknown [Dendroctonus ponderosae]
Length = 325
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 17/184 (9%)
Query: 48 KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
YV + D + +G K++ + +R +R I DFD +F A
Sbjct: 104 PYVPPEGDGKVSPISAQGAKQNLV-----FLEKKSRTMLAVRKIRQYDEDFDGPEFCKSA 158
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV-GIDDMKIIN 166
+ Y + + + + R Y + ++ K ++ + I+ +I++
Sbjct: 159 TDIYIKMHECMAANDKETLINYITERAYPEVVHNID-----NKTLRWKYLKDIELPRIVH 213
Query: 167 ASI------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN 220
A + +T+R Q A YD+ L+ + V++ F +++
Sbjct: 214 ARNTEVITPDNVFAQVTVRFHTQQTLAIYDRFGRLMHGSEILAKDVLEYVVFEKHLSNQY 273
Query: 221 PNWV 224
W
Sbjct: 274 GLWR 277
>gi|167561581|ref|ZP_02354497.1| Tim44-like domain family protein [Burkholderia oklahomensis EO147]
Length = 324
Score = 63.4 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/237 (11%), Positives = 69/237 (29%), Gaps = 30/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A ++ + + G ++P + +
Sbjct: 105 FASMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPSQSRGGYGQDAGVPR 160
Query: 63 GKGKKKDNLDSINELFPIGTRL---------NKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
S + R+ +V FD + FL A+ +
Sbjct: 161 QAASNDAFPGSGSAYAGEAQRMFGGAAAATTAAAAAAAPAVPAGFDAEAFLRNAKVYFVR 220
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 LQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGE 277
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++R G + ++W + + W+L +
Sbjct: 278 HFASVRFHG----LIREAQGASAE-------PFEEVWNLSK---SGSQGWLLAGIQQ 320
>gi|195112778|ref|XP_002000949.1| GI22249 [Drosophila mojavensis]
gi|193917543|gb|EDW16410.1| GI22249 [Drosophila mojavensis]
Length = 362
Score = 63.4 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 87 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISSSGAKQKL-----EFLEKKSK 141
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S +F DF +A+ Y A + + I + V R Y + ++
Sbjct: 142 SLMAIRKIRSYEENFSTDDFGAQAQEIYIAAHTHMAAKEKYKIREFVSERCYPEMMHNVK 201
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLI 196
K + + ++ ++++A + E +T+R Q + A YD+ L+
Sbjct: 202 D-----KTIHWRFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHTQQMLAIYDRFGRLM 256
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 257 HGSEILSKDVLEYVVFEKHISNEYGKWRL 285
>gi|296115092|ref|ZP_06833734.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
hansenii ATCC 23769]
gi|295978429|gb|EFG85165.1| import inner membrane translocase subunit Tim44 [Gluconacetobacter
hansenii ATCC 23769]
Length = 325
Score = 63.4 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + + A++ + + F+ L+ S S V ++ + + E
Sbjct: 208 VQAAWSQQNLGALQHMATPEMVSYFSHQLTDLASRGARNVVSDVRFENGDLTESWQENGM 267
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ + I + D +I V ++WTF R W++ + +
Sbjct: 268 DYATVAMRYSLIDMTTDMTGHVIDGSSTERTVVTELWTFER--SSRGGTWLVSAIQQ 322
>gi|163854788|ref|YP_001629086.1| hypothetical protein Bpet0483 [Bordetella petrii DSM 12804]
gi|163258516|emb|CAP40815.1| conserved hypothetical protein [Bordetella petrii]
Length = 332
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 67/221 (30%), Gaps = 20/221 (9%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+++FA + F+ +LRGV G + + + ++
Sbjct: 125 LIGLVVFAVL--FIVRRLRGV-GPRHATQGAYGAARQEHAGQGQQPMWRQSAGASAGSAA 181
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + P + + DF+ +FL +A+ + I + G + +
Sbjct: 182 SPAAAAAPAPAAGLPAADDDNNWYIPGDFNTTEFLKKAKEQFVQIQAIWDSGDTDRLREF 241
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + + L+ R + + L+ +++ + ++R G
Sbjct: 242 LTDDLIAELKQQLAERGAAPNQTEVVLLN---AELLGIETVSDGHLASVRFSGMLR---- 294
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + +IW P W+L +
Sbjct: 295 -------EAPGTEAFRFEEIWNL---FKPQQGGWLLAGIQQ 325
>gi|257094387|ref|YP_003168028.1| import inner membrane translocase subunit Tim44 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046911|gb|ACV36099.1| import inner membrane translocase subunit Tim44 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 300
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 76/225 (33%), Gaps = 34/225 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+L+ A + + +R ++ ++P G + G + +
Sbjct: 108 MIGLLVVA-VMVAIGFVMR----RRAAAQQPALAGAGGFQYAAPDALNGGMARVEAGPSM 162
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ E G + DFD + F+ A+ S+ + + G + I +
Sbjct: 163 PAGTSTEAVTAGGNIPA----------DFDVEGFVRNAKISFIRLQAANDAGNLDDIREF 212
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
++ + +++ R ++ +V I D ++++ + EE+ +++R
Sbjct: 213 TTPEMFAEVRMNIADRGPV--AQETDVVSI-DAQVLDVAEEESRYLVSVRF--------- 260
Query: 190 DKDNLLISSDPEIFGKVIDIWTF--VRNIPPSNPNWVLISTKLGE 232
L+ V +IW R+ WVL + +
Sbjct: 261 --TGLIREDKAAAPEPVDEIWHLIKPRDGKSG---WVLAGIQQVQ 300
>gi|328767960|gb|EGF78008.1| hypothetical protein BATDEDRAFT_91206 [Batrachochytrium
dendrobatidis JAM81]
Length = 264
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 58/148 (39%), Gaps = 11/148 (7%)
Query: 90 DIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST----- 144
+ + + P+ F EA Y A+ ++ G + V + + +
Sbjct: 107 QVKTTTKGWKPRAFAIEAEKLYIAMNKAYARGDRAELSNCVTDGMMSALSPEIKAMQRIG 166
Query: 145 ---RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
SN + + +V + K+ + + IT+R+ + A+Y KD+ LI+ +P+
Sbjct: 167 KFVWDSNGSDRRPQVVHLATAKVATETGDMRLSQITVRVNVRQSMATY-KDDTLIAGNPD 225
Query: 202 IFGKVIDIWTFVR--NIPPSNPNWVLIS 227
+ +++ + + +N W +
Sbjct: 226 TYTSIVEHIVMEKWLDGKWANRPWKIAG 253
>gi|195444564|ref|XP_002069925.1| GK11306 [Drosophila willistoni]
gi|194166010|gb|EDW80911.1| GK11306 [Drosophila willistoni]
Length = 337
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 79/209 (37%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + + G K+ E ++
Sbjct: 78 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSLISSSGAKQKL-----EFLEKKSK 132
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S F +F + A+ Y A + + I + V R Y + ++
Sbjct: 133 SLMAVRKIRSYEESFSTDEFGDHAQEIYIAAHTHMAAREKYKIREFVSERCYPEMMHNVK 192
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLI 196
K + + ++ ++++A + E +T+R Q + A YD+ L+
Sbjct: 193 D-----KTIHWRFLQSLEPPRVVHARVTEVITKENQFAQVTVRFHTQQMLAIYDRFGRLM 247
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 248 HGSEILTKDVLEYVVFEKHISNEYGKWRL 276
>gi|82706055|ref|XP_727222.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23482963|gb|EAA18787.1| Drosophila melanogaster CG11779 gene product, putative [Plasmodium
yoelii yoelii]
Length = 443
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVYQ 136
T L +R + +F + + +E IV+S+ G + +
Sbjct: 282 TELAAALRVMKMDDKNFKLSELM----YLFEYVISKHIVESYLIGDEDTLRLHCGEAAFN 337
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLL 195
N S++ RK + + ++++ + ++ A +EE++ + Q I+ +KD+ +
Sbjct: 338 SLNLSITERKKKKLFLDTNVLIYKNHELKGAQRMEESSPWFIFTFHTQQINCLKNKDDEI 397
Query: 196 ISSDPEIFGKV 206
I + +V
Sbjct: 398 IEGKIDDIREV 408
>gi|256113826|ref|ZP_05454619.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
gi|265995175|ref|ZP_06107732.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
gi|262766288|gb|EEZ12077.1| import inner membrane translocase subunit Tim44 [Brucella
melitensis bv. 3 str. Ether]
Length = 342
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 68/221 (30%), Gaps = 9/221 (4%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL A I V +R ++ + + S+ G+G
Sbjct: 130 ILQVAVIALIVMFVMRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASGQGSFSGRTP 189
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
S+N V + + V + D F I + A+ KL
Sbjct: 190 SVNPFETKQAAAPVVEDEPMDVGQE-DLDRF----EQMLVDIQGGYGREDYAALRKLTTP 244
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
+ L S K + V + + A E N Y T+ + I D+
Sbjct: 245 EAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAIDVMVDRT 304
Query: 193 -NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ +P + +++WTF R + W L + + E
Sbjct: 305 SGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 342
>gi|47214080|emb|CAF95337.1| unnamed protein product [Tetraodon nigroviridis]
Length = 223
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 18/161 (11%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF---EGKVHAIEKLVD 131
E +R I ++F KDF A + E +++ + L+
Sbjct: 28 TEQIRQSAASQLAIRKIKDHDSEFSTKDF---AEQAQEIFIEAHNCLTNFNKEKLHSLLT 84
Query: 132 SRVYQDFNDSLSTRKSNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQF 184
R Y + TR + K ++ V ++ K+++A + +T+R+ +
Sbjct: 85 ERCYPE-----MTRGNRYKTIRWRFVESLELPKVVHARCPDMVSKGNLYGQVTVRMHSRQ 139
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
A YD+ L+ + E V++ R++ W L
Sbjct: 140 TLAIYDRFGRLMLGNEEQPKDVLEYLVLERHLVNPYGRWRL 180
>gi|167568817|ref|ZP_02361691.1| Tim44-like domain family protein [Burkholderia oklahomensis C6786]
Length = 325
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/237 (11%), Positives = 69/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A +R + ++ ++P + +
Sbjct: 105 FASMMANVIVIALLAMAG---IWLVRKFMNRRGAQQQPAYAGGQPSQSRGGYGQDAGVPR 161
Query: 63 GKGKKKDNLDSINELFPIGTRL---------NKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
S + R+ +V FD + FL A+ +
Sbjct: 162 QAASNDAFPGSGSAYAGEAQRMFGGAAAATTAAAAAAAPAVPAGFDTEAFLRNAKVYFVR 221
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 222 LQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGE 278
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++R G + ++W + + W+L +
Sbjct: 279 HFASVRFHG----LIREAQGASAE-------PFEEVWNLSK---SGSQGWLLAGIQQ 321
>gi|300692535|ref|YP_003753530.1| hypothetical protein RPSI07_2910 [Ralstonia solanacearum PSI07]
gi|299079595|emb|CBJ52273.1| conserved membrane protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 345
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 76/249 (30%), Gaps = 44/249 (17%)
Query: 8 SGDFLILLFAFITFFVFLQLRGV-------------LGKKTGNEKPFSGFFSGKYVFSKR 54
S LI + AF+ ++ +LRG LG G+ +P+ +
Sbjct: 113 SNLILIAIIAFVVMWIIRKLRGSRPQEPAYATGGPSLG---GDREPYVPSPAVPAAQPAA 169
Query: 55 DERGIITLGKGKKKDNLDSINELF--------PIGTRLNKVMRDIVSVYT-----DFDPK 101
I G L + + P N + S DFD +
Sbjct: 170 PVASSIDTGSTGSTSGLGAGAQTAAQAWSLGGPAAPTANAPVAAPASQQPWGVPADFDTQ 229
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
FL A+ + + ++ ++ I + ++ + L+ R + + +V + +
Sbjct: 230 AFLRNAKVYFIRLQAAWDTANLNDIREFTTPEMFAEIKMDLADRGTAPNK--TDVVSV-E 286
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
+++ ++R ++ ++W + I S
Sbjct: 287 AELLGIETSPTEYLASVRF-----------AGMIREEANAPAQPFAEVWNLTKPIQGSG- 334
Query: 222 NWVLISTKL 230
WVL +
Sbjct: 335 GWVLAGIQQ 343
>gi|254470189|ref|ZP_05083593.1| import inner membrane translocase, subunit Tim44 [Pseudovibrio sp.
JE062]
gi|211960500|gb|EEA95696.1| import inner membrane translocase, subunit Tim44 [Pseudovibrio sp.
JE062]
Length = 351
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 68/199 (34%), Gaps = 26/199 (13%)
Query: 40 PFSGFFSGKYVFSKRDERGIITLGK--GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTD 97
PF+ +G +R I G + + +I D
Sbjct: 171 PFTFNDAGAQDAPRRSGSSGIPNTGFGGGQAPQFEEQPVFSTEADD------EIGLTADD 224
Query: 98 FDPKDFLNEARNSYEAIVD----SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
FD ++EA++ ++ I ++ + F + L SN +
Sbjct: 225 FD----------AFEALLTTVWTAYGSEDYGKIREIATPEIMGYFAEELGKAASNGLINE 274
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTF 212
+ + + A E + Y ++ + + I ++ N ++ + ++ + I+IWTF
Sbjct: 275 VRDIKLLQGDLTEAWREGDKDYASVAMRYESIDVMRERATNKVVEGNADVPEERIEIWTF 334
Query: 213 VRNIPPSNPNWVLISTKLG 231
+R NW L + +
Sbjct: 335 IRGAGE---NWQLSAIQQA 350
>gi|316932842|ref|YP_004107824.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
gi|315600556|gb|ADU43091.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
Length = 358
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 22/190 (11%)
Query: 57 RGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-------- 108
R G ++++ GT + F F AR
Sbjct: 173 RPDGADATGPMGRATHAMDQSAAQGTAQGTAQASQSGYRSGF---GFGGGARNDRPLEIK 229
Query: 109 ----NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGID 160
++E + ++ + + +L + F L K+ K S V +
Sbjct: 230 PDDYEAFERLLGEVQAAWSNEDIDRLRELATPEMASYFAKDLEENKAANDINKVSDVKLL 289
Query: 161 DMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN 220
+ A E T + T+ + + + ++ + + E + +IWTF R S
Sbjct: 290 QGDLAEAWTEGETDFATVAMRFSLVDKTLERGTDRLVAGSETPIEATEIWTFTRRPGAS- 348
Query: 221 PNWVLISTKL 230
W L + +
Sbjct: 349 --WELAAIQQ 356
>gi|156086672|ref|XP_001610745.1| mitochondrial inner membrane translocase subunit TIM44 [Babesia
bovis T2Bo]
gi|154797998|gb|EDO07177.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Babesia bovis]
Length = 395
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFND 140
+ L K ++++ + + FD +F+ + IV + +G ++E + N
Sbjct: 234 STLAKAVKEMKRLDSSFDLPEFIESVEHVVAPHIVQCYLDGDSKSLEAHCGELAFNVLNA 293
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLLISSD 199
S+ R + + +++ + D+++ ++EE + Q I+ D +++ +
Sbjct: 294 SIRERDLQKLYLDPNILILKDVELKGGMTMEEGYPWFIFNFKTQQINCLRDSRGHVVAGE 353
Query: 200 PEIFGKV 206
+ +V
Sbjct: 354 IDDIRQV 360
>gi|262373164|ref|ZP_06066443.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313189|gb|EEY94274.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 322
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 33/228 (14%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEK------PFSGFFSGKYVFSKRDERGIITLGKGK 66
+LL A + FFVF +K G +K P++ +G+ F +
Sbjct: 119 VLLAAAVAFFVF--------RKFGAKKKLATANPYAPNNNGQNNFGRPVSPQPTMRQTAG 170
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYT---DFDPKDFLNEARNSYEAIVDSFFEGKV 123
N+ + + T+ + S +P FL AR + I V
Sbjct: 171 DNTNIFGQSVGGGVATQAPFGGASMSSGNQLPDGTEPAAFLRIARQRFNHIQSVNSASNV 230
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
I + + +Y + + + + ++ + ++ E +++R
Sbjct: 231 EEIRRYLTPELYNSMYSDIMANQDQDV---AEFSNLN-AMVAESTTENGQYVVSVRF--- 283
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ + +WV+ +
Sbjct: 284 --------TGTVSEDLNSLPQPFTEIWHFVKPVGSQQ-DWVVAGIQQA 322
>gi|307543929|ref|YP_003896408.1| hypothetical protein HELO_1340 [Halomonas elongata DSM 2581]
gi|307215953|emb|CBV41223.1| hypothetical protein HELO_1340 [Halomonas elongata DSM 2581]
Length = 272
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 51/172 (29%), Gaps = 18/172 (10%)
Query: 59 IITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ G + + I FD + FL A+ + + ++
Sbjct: 115 AMAGANGTTSQASREADAQAFQSSASLGGTTHIGDEPAWFDRERFLGGAKEHFMTLQRAW 174
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
I+ V +Y R+ + N ++ +V + ++ + + T+
Sbjct: 175 DNNDFTLIQDYVTPELYNLLRQ---EREQHPANNRTEIVRLI-AELGSVRETDQQAEATV 230
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
G D++ + + W VR++ P W + +
Sbjct: 231 LFHG-----ILDENG--------AQNEFNETWHLVRDLRDGAP-WYVQGIEQ 268
>gi|156098709|ref|XP_001615370.1| mitochondrial import inner membrane translocase [Plasmodium vivax
SaI-1]
gi|148804244|gb|EDL45643.1| mitochondrial import inner membrane translocase, putative
[Plasmodium vivax]
Length = 461
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVYQ 136
T L +R++ +F + + +E IV+S+ G + +
Sbjct: 300 TELAAALREMKMQDKNFKLCELM----YLFEFVISKHIVESYLIGDEETLRLHCGQSAFN 355
Query: 137 DFNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLL 195
N S++ RK + + ++++ + ++ A +EE++ + Q I+ + ++ +
Sbjct: 356 SLNASINERKKKKVYLDTNVLIYKNHELKGAQRMEESSPWFIFTFHTQQINCLKNANDEI 415
Query: 196 ISSDPEIFGKV 206
+ + +V
Sbjct: 416 VEGHIDDIREV 426
>gi|312385733|gb|EFR30159.1| hypothetical protein AND_00421 [Anopheles darlingi]
Length = 340
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 82/209 (39%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RG+L + E+PF +G YV + D R +G K+ E T+
Sbjct: 86 RGILPPRPWLERPFYISCTGGVFEPYVPPEGDGRMSAISREGAKQAI-----EQLEKKTK 140
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S DFD +DF +A++ Y + E + + ++V R Y + +++
Sbjct: 141 SMMAIRKIRSYDEDFDARDFATQAQDIYIQAHQTMCEKNKYKLREIVTERAYPELMHNVA 200
Query: 144 TRKSNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLI 196
K ++ + + + + +EN +T+R Q + A YD+ L+
Sbjct: 201 D-----KTIRWQFIKSLEPPRVVHARCTDVITKENIFAQVTVRFHSQQLLAIYDRFGRLM 255
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
I ++ F +++ W L
Sbjct: 256 HGSETIEKDCLEYVVFEKHLANEYGVWRL 284
>gi|297538333|ref|YP_003674102.1| import inner membrane translocase subunit Tim44 [Methylotenera sp.
301]
gi|297257680|gb|ADI29525.1| import inner membrane translocase subunit Tim44 [Methylotenera sp.
301]
Length = 290
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 66/218 (30%), Gaps = 27/218 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
+L A + V + L +KP + + +
Sbjct: 96 TILMALLAAGVVMFLIS------KFKKPQPANNFNPSTVMQYAGESAYNAQDSQSQARSG 149
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ +N ++ +F F+ A+ S+ + + + I +
Sbjct: 150 ASGFGANAANSINS------NIPPNFPVDSFIRSAKASFIRLQAANDNKDSNDIREYTTP 203
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
V+ + + R + K+ ++ I +++ + + ++R GQ
Sbjct: 204 EVFAEITMQMQERGNA--VQKTEVIAIQ-AELLEVNDDAVFSVASVRFTGQL-------- 252
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S + + ++W +++ N W+L +
Sbjct: 253 ----SENNGTPENIDEVWHIQKHLHDENAKWLLAGIQQ 286
>gi|323137415|ref|ZP_08072493.1| import inner membrane translocase subunit Tim44 [Methylocystis sp.
ATCC 49242]
gi|322397402|gb|EFX99925.1| import inner membrane translocase subunit Tim44 [Methylocystis sp.
ATCC 49242]
Length = 336
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 62/222 (27%), Gaps = 18/222 (8%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
+++F F++ R P F G KG
Sbjct: 131 IALVVFLARMAFMWWANRN---------APAGAGSRPGAPFGSMFTGGAPFGAKGPGAGG 181
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + + + DF+ + L + ++ + A+ +
Sbjct: 182 FRAAGFGSGAAPQGARA-TPLKVQAEDFNAFERLLGETQA------AYSREDLGALRMMS 234
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ F+D L + + S V + + A E + Y T+ + D
Sbjct: 235 TPEMASYFDDELDENRRKGVVNRVSDVKLLQGDLSEAWREGSDEYATVAMRFSLNDVMED 294
Query: 191 KD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ P + +++WTF R W L + +
Sbjct: 295 RATGKPTPGSPGK-SEAVEVWTFRRPAGAGPQEWKLSAIQQA 335
>gi|159185868|ref|NP_356915.2| hypothetical protein Atu3705 [Agrobacterium tumefaciens str. C58]
gi|159141002|gb|AAK89700.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 215
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 3/119 (2%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + KL + LS ++ V + + A EE
Sbjct: 98 VQSAYGAEDYGTLRKLTTPEAMSYLAEELSDNATSGVKNDVRDVTLLQGDVAEAWHEEGQ 157
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ + I D+ +I D + +++WTFVR NW + + +
Sbjct: 158 DYATVAMRYSAIDIMRDRTSGKVIEGDEHKPSEAVEMWTFVRRPGND--NWQVAAIQAA 214
>gi|256083996|ref|XP_002578220.1| mitochondrial 39S ribosomal protein L45 [Schistosoma mansoni]
gi|238663583|emb|CAZ34458.1| putative mitochondrial 39S ribosomal protein L45 [Schistosoma
mansoni]
Length = 327
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 16/150 (10%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEA---IVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
K + + S F+ K F EA N Y ++ ++ + + + +LV + D L
Sbjct: 126 KDLSLLKSHEPSFNSKRFTIEAENIYVEAHDLLQNYRQNE-SRLFELVTEKALVDMTADL 184
Query: 143 STRKSNEKNVKSSLVG-IDDMKIINAS-----IEENT-VYITIRIVGQFISASYDKDNLL 195
R ++ VG I+ +++ + N +T+R Q I + Y++ L
Sbjct: 185 KLR-----TLQWKFVGNIEPPRVVQIRCNELLSKGNVYAQVTVRFYTQQILSIYNRFGRL 239
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ +P+ V++ F R+I W L
Sbjct: 240 LYGNPDTAVDVLEYVVFERHISDEYGTWRL 269
>gi|206559267|ref|YP_002230028.1| hypothetical protein BCAL0874 [Burkholderia cenocepacia J2315]
gi|198035305|emb|CAR51180.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 343
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 71/238 (29%), Gaps = 32/238 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQL----------RGVLGKKTGNEKPFSGFFSGKYVFS 52
F M + +I L A + ++ + V G + SG +S F
Sbjct: 124 FASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSVGGAASS-----SGGYSQSPSFQ 178
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ + + + + V FD + FL A+ +
Sbjct: 179 QGNAGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFV 238
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ +G + I + ++ + L +R ++ +V + D +++
Sbjct: 239 RLQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNDANQTDVVQL-DAELVAIEDRGI 295
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R L+ S ++W + + W+L +
Sbjct: 296 EQSASVRF-----------HGLIRESANTSAAPFDEVWNLSK---SGSQGWLLAGIQQ 339
>gi|254247237|ref|ZP_04940558.1| Mitochondrial import inner membrane translocase, subunit Tim44-like
protein [Burkholderia cenocepacia PC184]
gi|124872013|gb|EAY63729.1| Mitochondrial import inner membrane translocase, subunit Tim44-like
protein [Burkholderia cenocepacia PC184]
Length = 343
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 71/238 (29%), Gaps = 32/238 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQL----------RGVLGKKTGNEKPFSGFFSGKYVFS 52
F M + +I L A + ++ + V G + SG +S F
Sbjct: 124 FASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSVGGAASS-----SGGYSQSPSFQ 178
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ + + + + V FD + FL A+ +
Sbjct: 179 QGNTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFV 238
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ +G + I + ++ + L +R ++ +V + D +++
Sbjct: 239 RLQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNDANQTDVVQL-DAELVAIEDRGI 295
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R L+ S ++W + + W+L +
Sbjct: 296 EQSASVRF-----------HGLIRESANTSAAPFDEVWNLSK---SGSQGWLLAGIQQ 339
>gi|71909645|ref|YP_287232.1| import inner membrane translocase, subunit Tim44 [Dechloromonas
aromatica RCB]
gi|71849266|gb|AAZ48762.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Dechloromonas aromatica RCB]
Length = 288
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 71/220 (32%), Gaps = 33/220 (15%)
Query: 16 FAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
A + V GV+G +F K + + +N
Sbjct: 99 MALLAVAVI----GVIG-----------YFMRKKAAASQQGGMQYAGANANYGNNAPHQP 143
Query: 76 ELFPIGTRLNKVMRDIVS---VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
+ P G + + + FD + F+ A+ ++ + S G + I +
Sbjct: 144 DFIPAGGSAAAPLASATTGGNIPAGFDVEGFVRNAKVNFIRLQASNDAGNLDDIREFTSP 203
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
++ + ++ R + ++ +V ++ ++I+ + E + +++R G I D
Sbjct: 204 EMFAEIKMEMAERGNA--KQETDVVQLN-AEVIDVAEEPSRYIVSVRFTG-LIREEKDAA 259
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+IW + S W L + +
Sbjct: 260 AAPFD----------EIWHMTKPTDNSR-GWTLAGIQQVQ 288
>gi|300313191|ref|YP_003777283.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075976|gb|ADJ65375.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 317
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 66/227 (29%), Gaps = 18/227 (7%)
Query: 6 MDSGDFLILLFAFI-TFFVFL-QLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLG 63
M +L A + +FL ++ G++ N P +G
Sbjct: 106 MGGLLGSLLTIALLCAAVIFLIRMFA-RGREAQNNNPAYATPMPGVSPIGSAAGATPEIG 164
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
G + N + G + FD F+ A+ + + ++ V
Sbjct: 165 SGLRDINPPPALQGNAYGAAAQPAQIQQWGIPEGFDTAGFVRNAKTYFIRLQAAWDRADV 224
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
+ I + ++ + L+ R ++ V D +++ T+R
Sbjct: 225 NDIREFTTPEMFAELRMQLTER---GAAPNATDVVQLDAQLLGIETMAFDYLATVRF--- 278
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
L+ + +IW + + S WVL +
Sbjct: 279 --------QGLIKEAPDVSAEPFAEIWNLSKPLNGSG-GWVLAGIQQ 316
>gi|296533885|ref|ZP_06896415.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265797|gb|EFH11892.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 47
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYV 50
++LFA + F+ L+LR VLG++ G E+P +
Sbjct: 7 VDLILFAMVAAFLVLRLRSVLGRRQGFERPPQERPAPGQA 46
>gi|270158819|ref|ZP_06187476.1| transmembrane protein [Legionella longbeachae D-4968]
gi|289166389|ref|YP_003456527.1| hypothtical protein [Legionella longbeachae NSW150]
gi|269990844|gb|EEZ97098.1| transmembrane protein [Legionella longbeachae D-4968]
gi|288859562|emb|CBJ13527.1| putative hypothtical protein [Legionella longbeachae NSW150]
Length = 273
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 80/225 (35%), Gaps = 46/225 (20%)
Query: 8 SGDFLILLFAFITFFV--FLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
SG L+ + FFV F + + G +TG PF+
Sbjct: 88 SGILSWLILGAVLFFVVGFFRRKMQPGYQTGQSSPFNQN--------------------- 126
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+N +G N I F P+ FL EA+ ++ + ++ + +
Sbjct: 127 -PLNNFTQSFSNSSMGGNSNTSEYPI-----GFVPETFLREAKVTFNRLQAAYDQKNLQD 180
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ + V+ + L R + ++ + D ++++ S + N+ ++R G
Sbjct: 181 LSEFTAPEVFAEIKMQLDERGDAPNK--TEVISL-DAELLDISKQSNSFIASVRFTG--- 234
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I + E ++ +IW F R P S P W++ +
Sbjct: 235 ---------SIKENDEQPSQLDEIWHF-RQFPNS-PQWLVGGVQQ 268
>gi|330961416|gb|EGH61676.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 280
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQREASQPGQNPIFGSSAPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL AR ++A+ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFNEERFLEAARGHFQALQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTFIDNLSVQLDGVDDRADKTIATLTFSGVSKTSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 278
>gi|225707976|gb|ACO09834.1| 39S ribosomal protein L45, mitochondrial precursor [Osmerus mordax]
Length = 315
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
E +R I T F K+F A+ Y ++ + + LV R
Sbjct: 114 TEQIRQSAASQLAVRKIKEHDTTFTTKEFPGHAQGIYIEAHNALTQFNKEKLHSLVTERC 173
Query: 135 YQDFNDSLSTRKSNEKNVKSSLV-GIDDMKIINAS-----IEENT-VYITIRIVGQFISA 187
Y + TR + K ++ + V ++ K+++A + N +T+RI + A
Sbjct: 174 YPE-----MTRANRYKTLRWTFVESLEPPKVVHARCPEMVSKGNLYGQVTLRIHSRQTLA 228
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
YD+ L+ E V++ R++ W L
Sbjct: 229 IYDRFGRLMLGSEEEPKDVLEYLVLERHLINPYGRWRL 266
>gi|291237324|ref|XP_002738585.1| PREDICTED: mitochondrial ribosomal protein L45-like [Saccoglossus
kowalevskii]
Length = 318
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 53/143 (37%), Gaps = 13/143 (9%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ----DFNDSLS 143
+R I +F+ KDF A+ + + + + I+ + +++ F
Sbjct: 138 LRKIRKFDPEFNTKDF---AKQAQHIFIKAHSA--LQDIKNFLLMNIHEDMVWGFKYKTV 192
Query: 144 TRKSNEKNVKSSLVGIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDPEI 202
E K +V I +I+ + NT T+R + A YD+ ++
Sbjct: 193 RWNWVESIEKPRVVHIRCTDMIS---KGNTYAQATVRFHSKQTLAIYDRFGRIMQGSETS 249
Query: 203 FGKVIDIWTFVRNIPPSNPNWVL 225
V++ F +++ +W +
Sbjct: 250 PKDVLEYVVFEKHLMDKYGSWRI 272
>gi|116249720|ref|YP_765558.1| putative transmembrane TIM family protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115254368|emb|CAK03999.1| putative transmembrane TIM family protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 331
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 6/122 (4%)
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ + +L + L +N S V + I A E+
Sbjct: 210 QVQTAYGAEDYGTLRRLTTPEAMSYLAEELGENATNGVRNSVSDVKLLQGDIAEAWREDG 269
Query: 173 TVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ R D ++S D + ++WTFVR W L + +
Sbjct: 270 QEYATLAMRYSSIDAMVERDS-GRVVSGDDRRPSESTEVWTFVRKSGAD---WKLAAIQG 325
Query: 231 GE 232
E
Sbjct: 326 AE 327
>gi|90423037|ref|YP_531407.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB18]
gi|90105051|gb|ABD87088.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB18]
Length = 332
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 13/129 (10%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ G V + L + F+ L+ K+ K S V + +
Sbjct: 208 EAFEKLLSEIQTTWSNGDVGHLHTLATPEMVSYFSGDLAANKARGVENKVSDVKLLQGDL 267
Query: 165 INASIEENT--VYITIRIVGQFISASYD-KDNLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
A E T + +R + + D L+ E + ++WTF R
Sbjct: 268 AEAWREGETDYASVAMRFS--LVDKTIDTATGKLVEGS-EQPTEATEVWTFARRRGSE-- 322
Query: 222 NWVLISTKL 230
W L + +
Sbjct: 323 -WELSAIQQ 330
>gi|170734093|ref|YP_001766040.1| import inner membrane translocase subunit Tim44 [Burkholderia
cenocepacia MC0-3]
gi|169817335|gb|ACA91918.1| import inner membrane translocase subunit Tim44 [Burkholderia
cenocepacia MC0-3]
Length = 343
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 71/238 (29%), Gaps = 32/238 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQL----------RGVLGKKTGNEKPFSGFFSGKYVFS 52
F M + +I L A + ++ + V G + SG +S F
Sbjct: 124 FASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSVGGAASS-----SGGYSQSPSFQ 178
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ + + + + V FD + FL A+ +
Sbjct: 179 QGNTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDIEAFLRSAKVYFV 238
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ +G + I + ++ + L +R ++ +V + D +++
Sbjct: 239 RLQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNDANQTDVVQL-DAELVAIEDRGI 295
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R L+ + ++W + + W+L +
Sbjct: 296 EQSASVRF-----------HGLIREAANTSAAPFDEVWNLSK---SGSQGWLLAGIQQ 339
>gi|196000530|ref|XP_002110133.1| hypothetical protein TRIADDRAFT_53791 [Trichoplax adhaerens]
gi|190588257|gb|EDV28299.1| hypothetical protein TRIADDRAFT_53791 [Trichoplax adhaerens]
Length = 304
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 6/141 (4%)
Query: 91 IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN-- 148
I F+ DF +A Y A ++ + L + + + R+
Sbjct: 139 IKRKAKPFNISDFKLQAEKIYIATNEALASQDKTRLHTLTTEIAFHELRSAFKNRQIKWQ 198
Query: 149 --EKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
++ I + + + + IT+++ + I A YD+ N L++ + + +
Sbjct: 199 CLGTASAPRIINIRVIPLEDKT--NTFAQITVKLQLKQILAVYDQYNRLLTGSEDRYKQP 256
Query: 207 IDIWTFVRNIPPSNPNWVLIS 227
+ F R++ N W +
Sbjct: 257 TEYVVFERHLAKPNSPWRICG 277
>gi|254693967|ref|ZP_05155795.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 3 str. Tulya]
Length = 134
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I + A+ KL + L S K + V + + A E N
Sbjct: 18 IQGGYGREDYAALRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNV 77
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Y T+ + I D+ ++ +P + +++WTF R + W L + + E
Sbjct: 78 EYATVAMRYSAIDVVVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 134
>gi|107023666|ref|YP_621993.1| import inner membrane translocase, subunit Tim44 [Burkholderia
cenocepacia AU 1054]
gi|116690751|ref|YP_836374.1| import inner membrane translocase, subunit Tim44 [Burkholderia
cenocepacia HI2424]
gi|105893855|gb|ABF77020.1| import inner membrane translocase, subunit Tim44 [Burkholderia
cenocepacia AU 1054]
gi|116648840|gb|ABK09481.1| import inner membrane translocase, subunit Tim44 [Burkholderia
cenocepacia HI2424]
Length = 343
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 71/238 (29%), Gaps = 32/238 (13%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQL----------RGVLGKKTGNEKPFSGFFSGKYVFS 52
F M + +I L A + ++ + V G + SG +S F
Sbjct: 124 FASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSVGGAASS-----SGGYSQSPSFQ 178
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ + + + + V FD + FL A+ +
Sbjct: 179 QGNTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFV 238
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ +G + I + ++ + L +R ++ +V + D +++
Sbjct: 239 RLQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNDANQTDVVQL-DAELVAIEDRGI 295
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R L+ + ++W + + W+L +
Sbjct: 296 EQSASVRF-----------HGLIREAANTSAAPFDEVWNLSK---SGSQGWLLAGIQQ 339
>gi|195395288|ref|XP_002056268.1| GJ10851 [Drosophila virilis]
gi|194142977|gb|EDW59380.1| GJ10851 [Drosophila virilis]
Length = 362
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGVL + E+PF +G YV + D + I G K+ E ++
Sbjct: 88 RGVLPPRPWMERPFHISCTGGIFEAYVPPEGDGKKSIISSSGTKQKL-----EFLEKKSK 142
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I + +F DF +A+ Y A + + I + V R Y + ++
Sbjct: 143 SLMAVRKIRAYEENFSSDDFGVQAQEIYIAAHTHMAAKEKYKIREFVSERCYPEMMHNVK 202
Query: 144 TRKSNEKNVKSSLV------GIDDMKIINASIEEN-TVYITIRIVGQFISASYDKDNLLI 196
K + + + ++ +EN +T+R Q + A YD+ L+
Sbjct: 203 D-----KTIHWRFLQSLEPPRVVHARVTEVITKENLFAQVTVRFHTQQMLAIYDRFGRLM 257
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 258 HGSEIVTKDVLEYVVFEKHISNEYGKWRL 286
>gi|51473623|ref|YP_067380.1| hypothetical protein RT0421 [Rickettsia typhi str. Wilmington]
gi|51459935|gb|AAU03898.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 212
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 20/144 (13%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
M I FDP F+N A+ +++ I+++ ++ + + +L+D R ++F ++
Sbjct: 87 DGMEQIHKRLYSFDPVKFINNAKTAFQMIIEAAYKKDIKELTELIDKRYLEEFEK-ITP- 144
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
S SS + K + N ++I + G+ ++
Sbjct: 145 -SYGDFFDSSAL---SAKYSEIYMFGNNIFIKLLFQGK----------NVVD----KIEN 186
Query: 206 VIDIWTFVRNIPPSNPNWVLISTK 229
+ + WTF RN +W L + +
Sbjct: 187 LQEEWTFTRNANTKEVDWFLSNIE 210
>gi|121603693|ref|YP_981022.1| import inner membrane translocase subunit Tim44 [Polaromonas
naphthalenivorans CJ2]
gi|120592662|gb|ABM36101.1| import inner membrane translocase, subunit Tim44 [Polaromonas
naphthalenivorans CJ2]
Length = 330
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/246 (9%), Positives = 76/246 (30%), Gaps = 42/246 (17%)
Query: 12 LILLFAFIT----FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
I++FA + + +R + G+ G P + + F ++ +
Sbjct: 98 QIIMFALLALVVMVVIGFVMRKLKGR--GASAPGATRSQPPFAFQGAGNAAEASIPRSYS 155
Query: 68 KDNLDSINELFP-------------------IGTRLNKVMRDIVS--VYTDFDPKDFLNE 106
N+ + P G+ + + S V FD FL
Sbjct: 156 PSNVGNDASARPWERNTTLFDNMGTAAAPAAGGSMIGSGLSGSQSWGVPAGFDADGFLKA 215
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN--EKNVKSSLVGIDDMKI 164
+ ++ + D++ + + ++ + + L+ R+++ + K+ +V ++ ++
Sbjct: 216 CKANFVTLQDAWDRSDIQNLRSMMTDDMLEQIKTQLADRETHTGGVSNKTEVVMLN-AQL 274
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
+ + ++ ++ ++W + W+
Sbjct: 275 LGIEEMSDVYMASVEFS-----------GMIKEDASSGASPFREVWNMTKP-RSGGSGWL 322
Query: 225 LISTKL 230
+ +
Sbjct: 323 VAGVQA 328
>gi|170042852|ref|XP_001849125.1| 39S ribosomal protein L45 [Culex quinquefasciatus]
gi|167866282|gb|EDS29665.1| 39S ribosomal protein L45 [Culex quinquefasciatus]
Length = 336
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPF----SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RG+L + E+PF +G Y+ + D + +G K+ E T+
Sbjct: 83 RGLLPPRPWLERPFHISCTGGVFEPYIPPEGDGKMSAVSKEGAKQK-----FEQLEKKTK 137
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S DF+P +F A++ Y ++ + + ++V R Y + ++S
Sbjct: 138 SMMAIRKIRSYDDDFEPPEFAGYAQDIYIDTHNTLAAKNKYKLREIVTERAYPELIHNVS 197
Query: 144 TRKSNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLI 196
K + + + + + ++N +T+R Q I A YD+ L+
Sbjct: 198 D-----KTIHWKFLKSLEPPRVVHARCTDVISKDNIFAQVTVRFHSQQILAIYDRFGRLM 252
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
I ++ F +++ W L
Sbjct: 253 HGSETIAKDCLEYVVFEKHVSNEYGVWRL 281
>gi|86750877|ref|YP_487373.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris HaA2]
gi|86573905|gb|ABD08462.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris HaA2]
Length = 338
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 7/126 (5%)
Query: 109 NSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ + +L + F L+ K+ K S V + +
Sbjct: 214 EAFEQLLGDIQSAWTNEDTEKLNQLTTPEMASYFAKDLAENKAANDINKVSDVKLLQGDL 273
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
A E T Y T+ + + + ++ + + E +V ++WTF R +W
Sbjct: 274 AEAWREGETDYATVAMRFSLVDKTLERGTDRLVAGSETPIEVTEVWTFARRPGA---HWE 330
Query: 225 LISTKL 230
L + +
Sbjct: 331 LSAIQQ 336
>gi|253997457|ref|YP_003049521.1| import inner membrane translocase subunit Tim44 [Methylotenera
mobilis JLW8]
gi|253984136|gb|ACT48994.1| import inner membrane translocase subunit Tim44 [Methylotenera
mobilis JLW8]
Length = 270
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DF FL A+ S+ + + ++ + + V+ + + + R +V+++
Sbjct: 150 DFPVDSFLRNAKASFIRLQAANDRKDINDVREYTTPEVFAEISMQMQER---GSSVQTTE 206
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + +++ + E+ ++R GQ + + + ++W ++
Sbjct: 207 VVAINAELLEVANEDAYTIASVRFTGQL----RENNG--------ALESIDEVWHIQKDT 254
Query: 217 PPSNPNWVLISTKL 230
+ W+L +
Sbjct: 255 TNTQEKWLLAGIQQ 268
>gi|237747318|ref|ZP_04577798.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378669|gb|EEO28760.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 305
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 66/223 (29%), Gaps = 26/223 (11%)
Query: 9 GDFLILLFAFITFFVF-LQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
G +L I +V LR + + +
Sbjct: 106 GMISTILMLVIIVYVVRFLLR----------RFSKRRQMEQDPTAYASNYRNTGYQHSST 155
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ + F + D + DFD FL A++ + + ++ +G ++ I
Sbjct: 156 PEIGSGLPHQFQGNQSGAGAVSDTWGIPADFDVPAFLRAAKSYFIRMQAAWDKGDINDIH 215
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ ++ + L R + + V D +++ + +++ G+
Sbjct: 216 EFTTPEMFAEIRLQLQER---GDSPNVTDVVSLDAELLGIETLNDEYMASVKFSGKI--- 269
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++ ++W R I + WVL +
Sbjct: 270 -REAESAPAE-------PFEEVWNLTRPISKKD-GWVLAGIQQ 303
>gi|66048290|ref|YP_238131.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
syringae pv. syringae B728a]
gi|63258997|gb|AAY40093.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Pseudomonas syringae pv. syringae B728a]
Length = 281
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 67/221 (30%), Gaps = 36/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + + K G + +
Sbjct: 95 LFDILIMGLIA-FLIFR---------------FIARRRQQQQPKMAAAGAPPYQRETSQP 138
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ I + +++ F+ + FL+ AR ++++ + + ++ I +
Sbjct: 139 AQNPIFGSSSPASA-----APVINAPAWFNEQRFLDAARGHFQSLQEHWDANEMDKIAEF 193
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 194 VTPQMLQFLK---KERADLGDGFQSTFIENLQVQLDGVDDRADKTIATLTFSGVSKTSRF 250
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 251 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 279
>gi|66550524|ref|XP_625034.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial [Apis
mellifera]
Length = 332
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 23/210 (10%)
Query: 28 RGVLGKKTGNEKPF-----SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGT 82
G++ ++T NE+P G F V + IT K+K E +
Sbjct: 80 YGIMPQRTWNERPIYISSTPGIFESYIVPEGDGKFSPITTTGAKQK------IEFINKKS 133
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+ +R I ++ K FL + + Y+ ++ K I K V Y ++
Sbjct: 134 KSFIALRKIKGYEENYTTKTFLEQTLDIYKKAHEALCTQKKDEILKYVTETAYPIMIHNI 193
Query: 143 STRKSNEKNVKSSLV-GIDDMKIINASI-----EENT-VYITIRIVGQFISASYDKDNLL 195
K + + ++ ++++A + + N +TIR Q I YD+ +
Sbjct: 194 K-----NKTIIWKFMESLEPARLVHARVTSIVTQGNEFAQVTIRFHTQQILCIYDRFGRV 248
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ + V+D F +++ W +
Sbjct: 249 LLGSETVKKDVLDYIVFEKHLSNEYGIWRI 278
>gi|294340780|emb|CAZ89175.1| conserved hypothetical protein; putative membrane protein
[Thiomonas sp. 3As]
Length = 304
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 37/219 (16%)
Query: 15 LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI 74
L A F++F LR + S S + + +G G +
Sbjct: 118 LLALAAFWIFNLLR----------RKSSTDKSAQPMQYAGASQGYAQAPLGVETHMPAQW 167
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
T + DFD FL A+ Y + ++ +++++ + +
Sbjct: 168 TPGAGSQTASGAGIPA------DFDRDGFLASAKQHYIRLQQAWDAADLNSLKTFATAEM 221
Query: 135 YQDFNDSLSTRKSNEKNV-KSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
Y L R K+ +V + + ++ ++
Sbjct: 222 YDALAADLQQR---GMTPNKTEIVTL-EASLLALEETPTEYVASVEFS-----------G 266
Query: 194 LLISSDPEIFGKVIDIWTFV--RNIPPSNPNWVLISTKL 230
L+ V ++W V R+ W L +
Sbjct: 267 LVREETWGGASPVREVWNLVKPRDGSSG---WQLAGIQQ 302
>gi|85715641|ref|ZP_01046621.1| hypothetical protein NB311A_18371 [Nitrobacter sp. Nb-311A]
gi|85697580|gb|EAQ35457.1| hypothetical protein NB311A_18371 [Nitrobacter sp. Nb-311A]
Length = 330
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 9/127 (7%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V+ + L + F + L + K S V + +
Sbjct: 207 EAFERLLGEIQTAWSNEDVNTLHALATPEMVSYFTEDLQANDARGVVNKVSDVKLLQGDL 266
Query: 165 INASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E T Y T+ + I + ++ ++ + + D+WTF R W
Sbjct: 267 AEAWREGMTDYATVALRYSLIDKTIERAGGRIVEGS-DQPQEATDVWTFARRGGGK---W 322
Query: 224 VLISTKL 230
L + +
Sbjct: 323 ELSAIQQ 329
>gi|299067983|emb|CBJ39197.1| conserved membrane protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 345
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 72/251 (28%), Gaps = 51/251 (20%)
Query: 8 SGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFS--GKYVFSKRDERGIITLGKG 65
S LI + AF+ ++ +LRG +P ++ G + R+
Sbjct: 116 SNLILIAIIAFVVMWIIRKLRGS--------RPQEPAYATGGPSLSGDREPYVPSPAAPA 167
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYT--------------------------DFD 99
+ + + + L + ++ DFD
Sbjct: 168 AQPAAPVAASAGTGNASGLGSGAQTAAQAWSLGGPAAPAANAPAAAPAAQQPWGVPADFD 227
Query: 100 PKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI 159
+ FL A+ + + ++ G ++ I + ++ + L+ R + V
Sbjct: 228 TQAFLRNAKVYFVRLQAAWDAGNLNDIREFTTPEMFAEIKMDLTDR---GTVPNKTDVVS 284
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
+ +++ ++R ++ ++W + S
Sbjct: 285 VEAELLGIETHPTEYLASVRFS-----------GMIREEASAPAQPFAEVWNLTKPTQGS 333
Query: 220 NPNWVLISTKL 230
WVL +
Sbjct: 334 G-GWVLAGIQQ 343
>gi|296157950|ref|ZP_06840783.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
Ch1-1]
gi|295891718|gb|EFG71503.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
Ch1-1]
Length = 320
Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 69/225 (30%), Gaps = 27/225 (12%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
++ +++ A + F F+ + G +++ G L + +
Sbjct: 119 NALLIGLVVVAGVMLFRFI-----------ANRRRPDLAYGHGSANRQQTNGSPFLNQVR 167
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDF-DPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ ++ + + + D FL A+ + + ++ +
Sbjct: 168 EARPDTNLRDWPRAAMGTTGAAGSVKAPEPALADQAAFLVSAKAMFMRLQGAWDRNEQGD 227
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ +L ++ L R + V D +++ + +++R GQ
Sbjct: 228 LFELTTPEMFMRLKQDLEHR---GHEPSRTDVTQLDAEVLGTESNADETLVSVRFYGQMR 284
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D +I +IW VR++ + W L +
Sbjct: 285 -----------EDDAQIAQPFQEIWNMVRSVH-GDEGWRLAGIQQ 317
>gi|192292770|ref|YP_001993375.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
gi|192286519|gb|ACF02900.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
Length = 337
Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 11/192 (5%)
Query: 43 GFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKD 102
G++ + G G+G + N + R S P +
Sbjct: 151 GWWQRRNNPQPAYAAGQ-APGQGPQPMNQGPQSPGPQAAYRTGFGFGGGASNDR---PLE 206
Query: 103 FLNEARNSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVG 158
E ++E I ++ + + +L + F L K+ K S V
Sbjct: 207 IKPEDYEAFERLLGDIQAAWSNEDIDRLRQLATPEMASYFAKDLEENKAANDINKVSDVK 266
Query: 159 IDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP 218
+ + A E + Y T+ + + + ++ + + E +V +IWTF R
Sbjct: 267 LLQGDLAEAWREGESDYATVAMRFSLVDKTLERGTNRLVAGSETPIEVTEIWTFTRRPGA 326
Query: 219 SNPNWVLISTKL 230
S W L + +
Sbjct: 327 S---WELAAIQQ 335
>gi|332029058|gb|EGI69072.1| Putative 39S ribosomal protein L45, mitochondrial [Acromyrmex
echinatior]
Length = 337
Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 23/200 (11%)
Query: 38 EKPFS-----GFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIV 92
E+P F + +IT K+K F ++ +R I
Sbjct: 95 ERPAFISSTSSIFESYVAPEGDGKYSVITKEGAKQKFTF------FEKKSKSFMAIRKIK 148
Query: 93 SVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNV 152
S F FL EA + Y+ ++ I K V Y ++ + K +
Sbjct: 149 SFDDSFKTSFFLEEALDIYQKAYEALASKNEEEIIKYVTEMAY----PKITH-NTMNKTI 203
Query: 153 KSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+ ++ ++++A E +T+R Q + A YD+ LI +
Sbjct: 204 HWKFLESLEPARLVHARTTDVITKENVFAQLTVRFHTQQVLAIYDRFGHLIQGSEILRKD 263
Query: 206 VIDIWTFVRNIPPSNPNWVL 225
V++ F +++ W +
Sbjct: 264 VLEYIVFEKHLANEYGIWRI 283
>gi|296136650|ref|YP_003643892.1| import inner membrane translocase subunit Tim44 [Thiomonas
intermedia K12]
gi|295796772|gb|ADG31562.1| import inner membrane translocase subunit Tim44 [Thiomonas
intermedia K12]
Length = 304
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 37/219 (16%)
Query: 15 LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI 74
L A F++F LR + S S + + +G G +
Sbjct: 118 LLALAAFWIFNLLR----------RKSSTDKSAQPMQYAGASQGYAQAPLGAETHVPAQW 167
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
T + DFD FL A+ Y + ++ +++++ + +
Sbjct: 168 TPGAGSQTASGASIPA------DFDRDGFLASAKQHYIRLQQAWDAADLNSLKTFTTAEM 221
Query: 135 YQDFNDSLSTRKSNEKNV-KSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
Y L R K+ +V + + ++ ++
Sbjct: 222 YDALAADLQQR---GMTPNKTEIVTL-EASLLALEETPTEYVASVEFS-----------G 266
Query: 194 LLISSDPEIFGKVIDIWTFV--RNIPPSNPNWVLISTKL 230
L+ V ++W V R+ W L +
Sbjct: 267 LVREETWGGASPVREVWNLVKPRDGSSG---WQLAGIQQ 302
>gi|39936942|ref|NP_949218.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris CGA009]
gi|39650799|emb|CAE29322.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 337
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 11/192 (5%)
Query: 43 GFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKD 102
G++ + G G+G + N + R S P +
Sbjct: 151 GWWQRRNNPQPAYAAGQ-APGQGPQPMNQGPQSPGPQAAYRTGFGFGGGASNDR---PLE 206
Query: 103 FLNEARNSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVG 158
E ++E I ++ + + +L + F L K+ K S V
Sbjct: 207 IKPEDYEAFERLLGDIQAAWSNEDIDRLRQLATPEMASYFAKDLEENKAANDINKVSDVK 266
Query: 159 IDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP 218
+ + A E + Y T+ + + + ++ + + E +V +IWTF R
Sbjct: 267 LLQGDLAEAWREGESDYATVAMRFSLVDKTLERGTNRLVAGSETPIEVTEIWTFTRRPGA 326
Query: 219 SNPNWVLISTKL 230
S W L + +
Sbjct: 327 S---WELAAIQQ 335
>gi|220905000|ref|YP_002480312.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869299|gb|ACL49634.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 308
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 77/224 (34%), Gaps = 31/224 (13%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL-- 71
++ + F+ L+L + + S + G +G ++++
Sbjct: 111 IILIGLLAFLGLKL---------FARFRNRQASATAGAHGQHSGGYSDRMQGMQRESAGG 161
Query: 72 DSINELFPIGTRLNKVMRD---IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ + L G M I FD +FL A+ +Y + +S+ + + I +
Sbjct: 162 NGWDVLRGDGQGAAAHMAAGPNIPMPE-GFDVDEFLRGAKMAYTRLQNSWDKRDMDDISQ 220
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
S V ++ + + + S+ + + + +++ E N Y + +
Sbjct: 221 FTSSAV----QHAVREQMEADPSPSSTEILLVNAQLLGVENEGNEQYAQVFFDVLMRESP 276
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D + V ++W F+R + +W L + E
Sbjct: 277 ----------DQQAPSTVREVWHFMRPVQGG--SWKLDGIQQVE 308
>gi|262376593|ref|ZP_06069821.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262308303|gb|EEY89438.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 327
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 30/231 (12%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFF---------SGKYVFSKRDERGIIT 61
ILL A + FF+F ++ KK PF+ D I
Sbjct: 115 IWILLAAAVAFFIFRKMSA---KKKVASNPFAPNSGAGNTAPFGQAPTAPRGGDSTNIFG 171
Query: 62 LGKGKKKDNLDSINELFPIG-TRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFF 119
G + + ++ P+ S +P FL AR + I
Sbjct: 172 QNVGGQTSSNNAPLGSAPVNNAPFGAAYTQSGSQLPDGTEPAAFLRVARQRFNHIQSMNT 231
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+ I++ + +YQ + + + + + + ++ ++++S + +++R
Sbjct: 232 ASNISEIQRYLTPELYQSMYNDIMSNQDQDV---AEFSNLN-AMVVDSSTDNGQYIVSVR 287
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + +IW F + N +WV+ +
Sbjct: 288 F-----------TGTVSEDLNSLPQPFAEIWHFTKPAGS-NQDWVVAGIQQ 326
>gi|226952069|ref|ZP_03822533.1| membrane protein [Acinetobacter sp. ATCC 27244]
gi|294651122|ref|ZP_06728458.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226837187|gb|EEH69570.1| membrane protein [Acinetobacter sp. ATCC 27244]
gi|292823016|gb|EFF81883.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 338
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 52/195 (26%), Gaps = 16/195 (8%)
Query: 37 NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT 96
N FS S D I G + M +
Sbjct: 160 NSNQFSRQSSQPTARQTGDNTNIFGQAVGGGAATQSPFGNAPTQAPFGSATMSSGNQLPD 219
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
+P FL AR + I + I + + +Y + + + +
Sbjct: 220 GTEPAAFLRVARQRFNHIQSMNTASNIQEIRRYLTPDLYASMYQDIMANQDQDV---AEF 276
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
++ I + E +++R + + +IW FV+++
Sbjct: 277 SNLN-AMIAETATENGQYVVSVRF-----------TGTVSEDLNSLPQPFTEIWHFVKDV 324
Query: 217 PPSNPNWVLISTKLG 231
+WV+ +
Sbjct: 325 GSQQ-DWVVAGIQQA 338
>gi|33603441|ref|NP_891001.1| hypothetical protein BB4467 [Bordetella bronchiseptica RB50]
gi|33577565|emb|CAE34830.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 340
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 34/230 (14%)
Query: 10 DFLILLFAFITFFVFLQLR---------GVLGKKTGNEKPFSGFFSGKYVFSKRDERGII 60
+++FA I F+ +LR G GN +P + S
Sbjct: 129 LIALVVFAVI--FIVRRLRGGAPRQAMQSAYGAAGGN-RPGQPSQQPMWRESLNPAPAQQ 185
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ P + DFD FL +A++ + I +
Sbjct: 186 PAAAPVAAAAPAAAAAALPKAGDDGNWF-----IPGDFDTPRFLQQAKDQFVRIQGIWDS 240
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
G+V ++ + + + L R + + L+ +++ + ++R
Sbjct: 241 GEVESLRDFLTDDLISELKPQLEARGAAANKTEVVLLN---AELLGIETVSDGHLASVRF 297
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
G + + ++W P++ W+L +
Sbjct: 298 SGMLR-----------EAPGTEAFRFEEVWNL---FKPADGGWLLAGIQQ 333
>gi|148256773|ref|YP_001241358.1| hypothetical protein BBta_5490 [Bradyrhizobium sp. BTAi1]
gi|146408946|gb|ABQ37452.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 325
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V + L + F L ++ K S V + +
Sbjct: 201 EAFERLLGEIQQAWSNEDVGRLRLLSTPEMASYFERDLEQNQARGVVNKVSGVKLLQGDL 260
Query: 165 INASIEENTVYITI--RI-VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
A E Y T+ R + + ++ + +V +IWTF+R+
Sbjct: 261 AEAWRENGADYATVAMRFTLADKT--TERASGRVVEGS-DQPQEVTEIWTFLRHPGAD-- 315
Query: 222 NWVLISTKL 230
W L + +
Sbjct: 316 -WQLSAIQQ 323
>gi|53724992|ref|YP_102025.1| hypothetical protein BMA0187 [Burkholderia mallei ATCC 23344]
gi|121599413|ref|YP_994055.1| hypothetical protein BMASAVP1_A2759 [Burkholderia mallei SAVP1]
gi|124384532|ref|YP_001028281.1| hypothetical protein BMA10229_A2319 [Burkholderia mallei NCTC
10229]
gi|126450327|ref|YP_001081925.1| hypothetical protein BMA10247_2399 [Burkholderia mallei NCTC 10247]
gi|238561937|ref|ZP_00441249.2| Tim44 domain protein [Burkholderia mallei GB8 horse 4]
gi|251767560|ref|ZP_02267708.2| Tim44 domain protein [Burkholderia mallei PRL-20]
gi|52428415|gb|AAU49008.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228223|gb|ABM50741.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124292552|gb|ABN01821.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|126243197|gb|ABO06290.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|238523657|gb|EEP87094.1| Tim44 domain protein [Burkholderia mallei GB8 horse 4]
gi|243062328|gb|EES44514.1| Tim44 domain protein [Burkholderia mallei PRL-20]
Length = 323
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRPAAPGGAFPGSGSAYAGEAQRVFGGAAAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|291615430|ref|YP_003525587.1| import inner membrane translocase subunit Tim44 [Sideroxydans
lithotrophicus ES-1]
gi|291585542|gb|ADE13200.1| import inner membrane translocase subunit Tim44 [Sideroxydans
lithotrophicus ES-1]
Length = 275
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/183 (11%), Positives = 57/183 (31%), Gaps = 24/183 (13%)
Query: 48 KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
+ + G ++ + P+ + TDF + FL A
Sbjct: 116 RRKQEPAMQYAGAAAPYGGTQEPAQAYGGYAPVAAAG---------IPTDFPVESFLRSA 166
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
+ S+ + + + I + ++ + + + R + + V + + ++
Sbjct: 167 KTSFIRLQAANDRKDLDDIREYTTPEMFAEVSMQIRER---GDAPQKTDVDVVNADLLEV 223
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
E + ++R+ GQ + + +IW +N+ W+L
Sbjct: 224 VTENDYAIASVRMSGQL----RENNG--------TPESFDEIWHVQKNLKDDKSVWLLAG 271
Query: 228 TKL 230
+
Sbjct: 272 IQQ 274
>gi|53718281|ref|YP_107267.1| hypothetical protein BPSL0638 [Burkholderia pseudomallei K96243]
gi|52208695|emb|CAH34631.1| putative membrane protein [Burkholderia pseudomallei K96243]
Length = 323
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRPAAPGGAFPGSGSAYAGEAQRVFGGAAAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|121608297|ref|YP_996104.1| import inner membrane translocase subunit Tim44 [Verminephrobacter
eiseniae EF01-2]
gi|121552937|gb|ABM57086.1| import inner membrane translocase, subunit Tim44 [Verminephrobacter
eiseniae EF01-2]
Length = 321
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 71/230 (30%), Gaps = 28/230 (12%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII--TLGKGKKKDN 70
I L A + + V+ R VL + G G S + + + + +
Sbjct: 106 IALLAMLAYAVY---RMVLRARQGGAGGSGLALQGAGASSPQAAQAPVQYSPHNVGNDAS 162
Query: 71 LDSINELFPIGTRLNKVM--------RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G + + V FD FL A+ ++ + ++
Sbjct: 163 ARPWEGSGMAGRQPAAGVVIGSGLAGAQNWGVPEGFDTDGFLAAAKRNFVTLQAAWDRSD 222
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNE--KNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ + ++ + + L+ R++ ++ ++ V I + +++ + + ++
Sbjct: 223 ISTLRSMMTDDMLGEIRAQLAEREAQHGAQSQQTEAVMI-EARLLGIEDQADCYMASVEF 281
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ ++W ++ + W++ +
Sbjct: 282 S-----------GMIREEPSAGASPFREVWNMTKS-KAGSTGWLVAGVQA 319
>gi|254689480|ref|ZP_05152734.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 6 str. 870]
gi|256257728|ref|ZP_05463264.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
Length = 134
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I + A+ KL + L S K + V + + A E N
Sbjct: 18 IQGGYGREDYAALRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNV 77
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Y T+ + I D+ ++ +P + +++WTF R + W L + + E
Sbjct: 78 EYATVAMRYSAIDVMVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 134
>gi|254203707|ref|ZP_04910067.1| Tim44 domain protein [Burkholderia mallei FMH]
gi|147745219|gb|EDK52299.1| Tim44 domain protein [Burkholderia mallei FMH]
Length = 343
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 125 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 180
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 181 QRPAAPGGAFPGSGSAYAGEAQRVFGGAAAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 240
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 241 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 297
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 298 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 340
>gi|144897341|emb|CAM74205.1| Mitochondrial import inner membrane translocase, subunit Tim44
[Magnetospirillum gryphiswaldense MSR-1]
Length = 327
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 112 EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA---- 167
E + ++ +G A+ +LV V + L+ ++N V + I
Sbjct: 210 EGVQKAWSDGNPVALRQLVTPEVAGWIGEDLARDQANGVRNVVEDVTLLKGDISETWSEN 269
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
++ T IT + DN ++ DP + + WTFVR WVL +
Sbjct: 270 GMDYATAIIT--FSARD-YMVRLSDNEVVEGDPRNAVETTEAWTFVRGAGG---TWVLSA 323
Query: 228 TKL 230
+
Sbjct: 324 IEQ 326
>gi|254176738|ref|ZP_04883395.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254208682|ref|ZP_04915030.1| Tim44 domain protein [Burkholderia mallei JHU]
gi|254360262|ref|ZP_04976532.1| Tim44 domain protein [Burkholderia mallei 2002721280]
gi|147750558|gb|EDK57627.1| Tim44 domain protein [Burkholderia mallei JHU]
gi|148029502|gb|EDK87407.1| Tim44 domain protein [Burkholderia mallei 2002721280]
gi|160697779|gb|EDP87749.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
Length = 339
Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 121 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 176
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 177 QRPAAPGGAFPGSGSAYAGEAQRVFGGAAAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 236
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 237 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 293
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 294 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 336
>gi|17987012|ref|NP_539646.1| transporter [Brucella melitensis bv. 1 str. 16M]
gi|17982665|gb|AAL51910.1| transporter [Brucella melitensis bv. 1 str. 16M]
Length = 197
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I + A+ KL + L S K + V + + A E N
Sbjct: 81 IQGGYGREDYAALRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNV 140
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Y T+ + I D+ ++ +P + +++WTF R + W L + + E
Sbjct: 141 EYATVAMRYSAIDVMVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 197
>gi|302880097|ref|YP_003848661.1| import inner membrane translocase subunit Tim44 [Gallionella
capsiferriformans ES-2]
gi|302582886|gb|ADL56897.1| import inner membrane translocase subunit Tim44 [Gallionella
capsiferriformans ES-2]
Length = 281
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 53/134 (39%), Gaps = 15/134 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DF + FL A+ S+ + + ++ I + ++ + + + R + + +++
Sbjct: 159 DFPVESFLRSAKTSFIRLQAANDRKDLNDIREYTTPEMFAEISMQMHERDNTPQT--TNV 216
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
+ I+ +++ + E + ++R GQ S + V +IW +N+
Sbjct: 217 IAIN-GELLEVANEGDWAIASVRFTGQL------------SENNGTAENVDEIWHVQKNL 263
Query: 217 PPSNPNWVLISTKL 230
W+L +
Sbjct: 264 KDDKAVWLLSGIQQ 277
>gi|169632671|ref|YP_001706407.1| hypothetical protein ABSDF0845 [Acinetobacter baumannii SDF]
gi|169151463|emb|CAP00212.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
Length = 326
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 71/226 (31%), Gaps = 34/226 (15%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFS--GFFSGKYVFSKRDERGIITLGKGKKKDN 70
+LL A +TFFVF +K G++K + ++ R G +
Sbjct: 128 VLLAAAVTFFVF--------RKLGSKKKLAANNPYAPNNGGQNPFGRSAAPTNTGDNTNI 179
Query: 71 LDS-----INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
P G+ + +P FL AR + I +
Sbjct: 180 FGQSVGGGAATQAPFGSATTNSGNQLPD---GSEPASFLRVARQRFNHIQSINSASNIEE 236
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
I + + +Y + + + + + ++ M + +A+ E +++R
Sbjct: 237 IRRYLTPELYNSMYNDIMENQDQDV---AEFSNLNAMVVDSAT-ENGQYIVSVRF----- 287
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ + +WV+ +
Sbjct: 288 ------TGTVSEDLNSLPQPFTEIWHFVKPVGSQQ-DWVVAGIQQA 326
>gi|260884014|ref|ZP_05895628.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
gi|260873542|gb|EEX80611.1| import inner membrane translocase subunit Tim44 [Brucella abortus
bv. 9 str. C68]
Length = 139
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I + A+ KL + L S K + V + + A E N
Sbjct: 23 IQGGYGREDYAALRKLTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNV 82
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
Y T+ + I D+ ++ +P + +++WTF R + W L + + E
Sbjct: 83 EYATVAMRYSAIDVMVDRTSGAVVEGNPNEPVESVELWTFTRTDGGA---WQLAAIQGTE 139
>gi|27380918|ref|NP_772447.1| hypothetical protein bll5807 [Bradyrhizobium japonicum USDA 110]
gi|27354084|dbj|BAC51072.1| bll5807 [Bradyrhizobium japonicum USDA 110]
Length = 333
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 68/229 (29%), Gaps = 36/229 (15%)
Query: 8 SGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
S +++ + FV +L ++ ++ G G +
Sbjct: 133 SSILGLIIQIVLVVFVV-RL-------------AMSWWQRRHTPQAAYANADAGSGPGPQ 178
Query: 68 KDNLDSINELFPIGTR-LNKVMRDIVSVYTDFDPKDFLNEARNSYEA----IVDSFFEGK 122
+ N +I V ++E + ++
Sbjct: 179 TSYRSGLGGGLGGFGFGANNAPLEIKPVDY------------EAFERLLGDVQTAWSNED 226
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
V + L + F L ++ K + V + + A E T Y T+ +
Sbjct: 227 VAKLHTLATPEMVSYFEQDLGQNRARNVVNKVTNVKLLQGDLAEAWREGETDYATVALRF 286
Query: 183 QFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ D++ +++ E G+V ++WTF R W L + +
Sbjct: 287 ALTDKTLDRNTGAVVAGS-EQPGEVTEVWTFARRPGG---TWELSAIQQ 331
>gi|86360020|ref|YP_471910.1| hypothetical protein RHE_PB00141 [Rhizobium etli CFN 42]
gi|86284122|gb|ABC93183.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 337
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 6/118 (5%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + +L + L +N + S V + I A E
Sbjct: 217 VQTAYGAEDYGTLRRLTTPEAMSYLAEELGENATNGVRNRVSDVKLLQGDIAEAWRENGQ 276
Query: 174 VYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
Y T+ R D ++S D + +IWTFVR W L + +
Sbjct: 277 EYATLAMRYSSIDAMVERDS-GRVVSGDDRRPSESTEIWTFVRKSGAD---WKLAAIQ 330
>gi|328768615|gb|EGF78661.1| hypothetical protein BATDEDRAFT_90410 [Batrachochytrium
dendrobatidis JAM81]
Length = 430
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
+ + +R V F FL E Y ++++F +G +++
Sbjct: 265 EESEHARTIRAFKQVEPTFSVDAFLKETTQ-YTIPELMEAFLKGDADTLKEWCSEAALAK 323
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV-YITIRIVGQFISASYDKDNLLI 196
++K S L+ I + I + + V I I Q I ++ ++
Sbjct: 324 LTAGFESQKQQGLVSDSKLLDIRGVDIRQLKLLNDEVPIILIGFTTQEILLFRNRKGEIV 383
Query: 197 SSDPEIF 203
++
Sbjct: 384 VGSEDVI 390
>gi|323698095|ref|ZP_08110007.1| hypothetical protein DND132_0677 [Desulfovibrio sp. ND132]
gi|323458027|gb|EGB13892.1| hypothetical protein DND132_0677 [Desulfovibrio desulfuricans
ND132]
Length = 282
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 45/191 (23%), Gaps = 19/191 (9%)
Query: 35 TGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSV 94
+G +P G + + P T
Sbjct: 103 SGETRPDVRSDDGTAQRPEARTMDRHEAARRTWDMLGSREPGQRPEPTTPTGTPTGSSLR 162
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS 154
FD +FL A+ + + + + + VY D + + ++
Sbjct: 163 ADGFDEAEFLEGAKVLFSRFQQARDKEDYDDLRDFLSDGVYSDAVAA-------GERPRT 215
Query: 155 SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVR 214
V + + + ++ Q + + +W F R
Sbjct: 216 E-VMLVSALLTELHSDNGRTTASVHYDAQLR-----------VGEEGRPVRYRAVWEFDR 263
Query: 215 NIPPSNPNWVL 225
+ WVL
Sbjct: 264 DDTTPGGLWVL 274
>gi|167909581|ref|ZP_02496672.1| Tim44-like domain protein [Burkholderia pseudomallei 112]
Length = 314
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 96 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 151
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 152 QRQAAPGGAFPGSGSAYAGEAQRVFGGAAATTAAAAAPAVPAGFDTEAFLRNAKVYFVRL 211
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 212 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 268
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 269 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 311
>gi|187479558|ref|YP_787583.1| membrane protein [Bordetella avium 197N]
gi|115424145|emb|CAJ50698.1| Putative membrane protein [Bordetella avium 197N]
Length = 328
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 26/221 (11%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+++FA + F+ +LRG ++P G + + +
Sbjct: 127 LIGLVVFAVL--FIVRRLRG-----ASAQRPAMQGAYGGAGSQQAAQTQQPMWREASMPA 179
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + V FD FL +A+ + I + G V + L
Sbjct: 180 AAPVAAAAPAALPKAGEDGNWFVPGD--FDTPRFLQQAKEQFVRIQAIWDSGNVDNLRDL 237
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
+ + +F L R V + V + + +++ + ++R G
Sbjct: 238 LTDDLIAEFKPQLEAR---GNEVNKTEVVLLNAELLGIETVSDGHLASVRFSGMLR---- 290
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + ++W + W+L +
Sbjct: 291 -------EAPGAEAFRFEEVWNLFKPTTGG---WLLAGIQQ 321
>gi|167917595|ref|ZP_02504686.1| Tim44-like domain protein [Burkholderia pseudomallei BCC215]
Length = 267
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 49 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 104
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 105 QRQAAPGGAFPGSGSAYAGEAQRVFGGAAATTAAAAAPAVPAGFDTEAFLRNAKVYFVRL 164
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 165 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 221
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 222 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 264
>gi|126440320|ref|YP_001057720.1| Tim44-like domain-containing protein [Burkholderia pseudomallei
668]
gi|126219813|gb|ABN83319.1| Tim44-like domain protein [Burkholderia pseudomallei 668]
Length = 324
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 67/238 (28%), Gaps = 30/238 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSG---------KYVFSK 53
F M + +I L A ++ + + G ++P
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGI 160
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
+ + G +F +V FD + FL A+ +
Sbjct: 161 QRQAAPGGAFPGSGSAYAGEAQRVFGGAAAATAAAATAPAVPAGFDTEAFLRNAKVYFVR 220
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 LQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGE 277
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 HLASVRFHG----LIREAQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 321
>gi|237810871|ref|YP_002895322.1| Tim44 domain protein [Burkholderia pseudomallei MSHR346]
gi|237504479|gb|ACQ96797.1| Tim44 domain protein [Burkholderia pseudomallei MSHR346]
Length = 323
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRQAAPGGAFPGSGSAYAGEAQRVFGGAAAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|76811089|ref|YP_332258.1| transmembrane protein [Burkholderia pseudomallei 1710b]
gi|254261326|ref|ZP_04952380.1| Tim44-like domain protein [Burkholderia pseudomallei 1710a]
gi|76580542|gb|ABA50017.1| transmembrane protein [Burkholderia pseudomallei 1710b]
gi|254220015|gb|EET09399.1| Tim44-like domain protein [Burkholderia pseudomallei 1710a]
Length = 323
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRQAAPGGAFPGSGSAYAGEAQRVFGGAAATTAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|254187708|ref|ZP_04894220.1| Tim44-like domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|157935388|gb|EDO91058.1| Tim44-like domain protein [Burkholderia pseudomallei Pasteur 52237]
Length = 339
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 121 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 176
Query: 58 GIITLGKGKKKDNLDSINELFPI---GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 177 QRQAAPGGAFPGSGSAYAGEAQRVFGGAAATTAAAAAPAVPAGFDTEAFLRNAKVYFVRL 236
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 237 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 293
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 294 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 336
>gi|319945468|ref|ZP_08019728.1| Tim44 domain protein [Lautropia mirabilis ATCC 51599]
gi|319741254|gb|EFV93681.1| Tim44 domain protein [Lautropia mirabilis ATCC 51599]
Length = 318
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 33/239 (13%)
Query: 7 DSGDFLI-LLFAFITFFVFLQLRGVLGKK---------TGNEKPFS----GFFSGKYVFS 52
SG FL+ +L A + F F + GK+ G+ PF+ F+
Sbjct: 98 GSGIFLLMILLAGLAIFAF----RMFGKRLQQQQQAQAAGSGAPFAGNLRDAFNNSGKQG 153
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ D + G + P + V FD + F+ +A+ +
Sbjct: 154 QNDMFRQNSNAGGLFSQTPAAGAAQAPAADSTVSGYTAAMQVPGGFDTEAFVRQAKVQFV 213
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ +F + + ++ + N + R S + + +V ++ ++ E
Sbjct: 214 RLQAAFDARNADDLREFTSPEMFGELNIDMMQRGSAPQT--TEVVELN-AELTGMHQEGP 270
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ ++ L+ +IW F R WVL +
Sbjct: 271 ILVASVLFS-----------GLIREEPNSPAEPFSEIWNFTRP-ASGASGWVLAGIQQP 317
>gi|152981843|ref|YP_001354800.1| hypothetical protein mma_3110 [Janthinobacterium sp. Marseille]
gi|151281920|gb|ABR90330.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 307
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 24/228 (10%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M S ++ L F F++ ++ K GN + S +S ++ I
Sbjct: 102 FASMISTILMVALLGFAAMFIYRMIKN---KSAGN----NAQPSFANGYSAKNSTPDIGS 154
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
G ++ ++ P+ + + + DFD + F+ A+ + + ++ +
Sbjct: 155 GLNQQYQQPSALQSAAPMAS--GAAYEAVNELPADFDVESFIRNAKTYFIRLQAAWDKAD 212
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
++ I + ++ + L R + V + + N +I+
Sbjct: 213 INDIREFTTPEMFAELKLQLQER---GATPNVTDVVTLNGEFYGVETVGNDYIASIKF-- 267
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ +D + W + + N WVL +
Sbjct: 268 ---------TGMIREADHAPTEPFSEAWNLSKPVN-GNGGWVLAGIQQ 305
>gi|332716434|ref|YP_004443900.1| hypothetical protein AGROH133_11996 [Agrobacterium sp. H13-3]
gi|325063119|gb|ADY66809.1| hypothetical protein AGROH133_11996 [Agrobacterium sp. H13-3]
Length = 360
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 3/119 (2%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + KL + LS ++ V + + A EE
Sbjct: 243 VQAAYGAEDYGTLRKLTTPEAMSYLAEELSDNATSGVKNDVRDVTLLQGDVAEAWHEEGQ 302
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ + I D+ +I D + + +++WTFVR N NW + + +
Sbjct: 303 DYATVAMRYSAIDIMRDRTSGKVIEGDEQHPSEAVEMWTFVR--RGGNDNWQVAAIQAA 359
>gi|260549298|ref|ZP_05823518.1| import inner membrane translocase subunit Tim44 [Acinetobacter sp.
RUH2624]
gi|260407704|gb|EEX01177.1| import inner membrane translocase subunit Tim44 [Acinetobacter sp.
RUH2624]
Length = 328
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 30/224 (13%)
Query: 13 ILLFAFITFFVFLQLRGVLG--KKTGNEKPFSGFFSGKYVF---SKRDERGIITLGKGKK 67
+LL A + FFVF + LG KK P++ +G+ F + T G+
Sbjct: 130 VLLAAAVAFFVFRK----LGGKKKLAANNPYAPNSNGQNTFGRSAAPTNSNDNTNIFGQS 185
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ F T N + +P FL AR + I + I
Sbjct: 186 VGGGTATQAPFGGATTSNG-----NQLPDGSEPASFLRVARQRFNHIQSINSASNIEEIR 240
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ + +Y + + + + + ++ M + +A+ E +++R
Sbjct: 241 RYLTPELYNSMYNDIMENQDQDV---AEFSNLNAMVVDSAT-ENGQYIVSVRF------- 289
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+ + +IW FV+ + +WV+ +
Sbjct: 290 ----TGTVSEDLNSLPQPFTEIWHFVKPVGSQQ-DWVVAGIQQA 328
>gi|241258750|ref|YP_002978634.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240863220|gb|ACS60883.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 331
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 6/122 (4%)
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ + +L + L +N + S V + I A E+
Sbjct: 210 QVQTAYGAEDYGTLRRLTTLEAMSYLAEELGENATNGVRNRVSDVKLLQGDIAEAWREDG 269
Query: 173 TVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ R D ++S D + ++WTFVR W L + +
Sbjct: 270 QEYATLAMRYSSIDAMVERDS-GRVVSGDDRRPSESTEVWTFVRKSGAD---WKLAAIQG 325
Query: 231 GE 232
E
Sbjct: 326 AE 327
>gi|332380812|gb|AEE65659.1| hypothetical protein BPTD_0159 [Bordetella pertussis CS]
Length = 334
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 69/222 (31%), Gaps = 24/222 (10%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGK-KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
+++FA I F+ +LRG G + + + + + +L +
Sbjct: 129 LIALVVFAVI--FIVRRLRG--GAPRQAMQGAYGAAGGNRPGQPSQQPMWRESLNPAPAQ 184
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ + + FD FL +A++ + I + G+V ++
Sbjct: 185 QPAAAPAAAAAALPKAGDDGNWFIPGD--FDTPRFLQQAKDQFVRIQGIWDSGEVESLRD 242
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
+ + + L R + + L+ +++ + ++R G
Sbjct: 243 FLTDDLISELKPQLEARGAAANKTEVVLLN---AELLGIETVSDGHLASVRFSGMLR--- 296
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + ++W P++ W+L +
Sbjct: 297 --------EAPGTEAFRFEEVWNL---FKPADGGWLLAGIQQ 327
>gi|322390169|ref|ZP_08063701.1| hypothetical protein HMPREF8577_1171 [Streptococcus parasanguinis
ATCC 903]
gi|321143129|gb|EFX38575.1| hypothetical protein HMPREF8577_1171 [Streptococcus parasanguinis
ATCC 903]
Length = 327
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 10/167 (5%)
Query: 50 VFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARN 109
D + G K+ + + +R I + FD FL++ +
Sbjct: 101 AKEANDSDESFSSNSGPKRTTEERAGRPIE---NNYEAIRRIRKLDPMFDEDRFLSQVKL 157
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN-AS 168
Y + ++ E +++ L + +Y+ L + V ++D KI +
Sbjct: 158 VYLQLQSAWTEKDWNSVRNLESTSLYEQHLTQLQEHIRAKTTNVLERVRVEDSKIKDFIE 217
Query: 169 IEENTVYITIRIVGQFISASY-DKDNLLISSDPEIFGKVIDIWTFVR 214
E I + + D+ +I DP D++T R
Sbjct: 218 NPEGNDRIEVILSSTMRDYIRNDETGRVIEGDP-----TKDLFTVYR 259
>gi|226196729|ref|ZP_03792309.1| Tim44 domain protein [Burkholderia pseudomallei Pakistan 9]
gi|225931260|gb|EEH27267.1| Tim44 domain protein [Burkholderia pseudomallei Pakistan 9]
Length = 323
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRQAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAG--TNQTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIREAQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|33591411|ref|NP_879055.1| hypothetical protein BP0162 [Bordetella pertussis Tohama I]
gi|33571053|emb|CAE40541.1| putative membrane protein [Bordetella pertussis Tohama I]
Length = 340
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 67/231 (29%), Gaps = 36/231 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGK----------KTGNEKPFSGFFSGKYVFSKRDERGI 59
+++FA I F+ +LRG G G +P + S
Sbjct: 129 LIALVVFAVI--FIVRRLRG--GAPRQAMQGAYGAAGGNRPGQPSQQPMWRESLNPAPAQ 184
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ P + DFD FL +A++ + I +
Sbjct: 185 QPAAAPVAAAAPAAAAAALPKAGDDGNWF-----IPGDFDTPRFLQQAKDQFVRIQGIWD 239
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G+V ++ + + + L R + + L+ +++ + ++R
Sbjct: 240 SGEVESLRDFLTDDLISELKPQLEARGAAANKTEVVLLN---AELLGIETVSDGHLASVR 296
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
G + + ++W P++ W+L +
Sbjct: 297 FSGMLR-----------EAPGTEAFRFEEVWNL---FKPADGGWLLAGIQQ 333
>gi|33598497|ref|NP_886140.1| hypothetical protein BPP3994 [Bordetella parapertussis 12822]
gi|33574626|emb|CAE39277.1| putative membrane protein [Bordetella parapertussis]
Length = 340
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 67/231 (29%), Gaps = 36/231 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGK----------KTGNEKPFSGFFSGKYVFSKRDERGI 59
+++FA I F+ +LRG G G +P + S
Sbjct: 129 LIALVVFAVI--FIVRRLRG--GAPRQAMQGAYGAAGGNRPGQPSQQPMWRESLNPAPAQ 184
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF 119
+ P + DFD FL +A++ + I +
Sbjct: 185 QPAAAPVAAAAPAAAAAALPKAGDDGNWF-----IPGDFDTPRFLQQAKDQFVRIQGIWD 239
Query: 120 EGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
G+V ++ + + + L R + + L+ +++ + ++R
Sbjct: 240 SGEVESLRDFLTDDLISELKPQLEARGAAANKTEVVLLN---AELLGIETVSDGHLASVR 296
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
G + + ++W P++ W+L +
Sbjct: 297 FSGMLR-----------EAPGTEAFRFEEVWNL---FKPADGGWLLAGIQQ 333
>gi|209552377|ref|YP_002284292.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539489|gb|ACI59421.1| import inner membrane translocase subunit Tim44 [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 332
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 6/121 (4%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + +L + L +N + S V + I A E+
Sbjct: 212 VQTAYGAEDYATLRRLTTPEAMSYLAEELGENATNGVRNRVSDVKLLQGDIAEAWREDGQ 271
Query: 174 VYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
Y T+ R + ++S D + ++WTFVR W L + +
Sbjct: 272 EYATLAMRYSSIDAMVERNS-GRVVSGDDRRPSESTEVWTFVRKPGAD---WKLAAIQGS 327
Query: 232 E 232
E
Sbjct: 328 E 328
>gi|294891975|ref|XP_002773832.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239879036|gb|EER05648.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 497
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 51/129 (39%), Gaps = 4/129 (3%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T + + +R++ F + + N +I+ F EG ++ + N
Sbjct: 334 TEIAQSIREMKETDPHFRLSQLVEDVENVVAPSIIRWFLEGDAEDLKLHCGEAAFAAVNA 393
Query: 141 SLSTRKSNEKNVKSSLV-GIDDMKIINASIEE--NTVYITIRIVGQFISASYDKDNLLIS 197
S+ R++ + ++ +++ G +D+++ A ++ Q I+ ++ ++
Sbjct: 394 SIDARRNQKLSLDPTILQGPEDLELKGAKSGGEVDSPCFIFTFSTQQINCLRNEAGEVVE 453
Query: 198 SDPEIFGKV 206
+ +V
Sbjct: 454 GAIDDIRQV 462
>gi|217420068|ref|ZP_03451574.1| Tim44 domain protein [Burkholderia pseudomallei 576]
gi|217397372|gb|EEC37388.1| Tim44 domain protein [Burkholderia pseudomallei 576]
Length = 339
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 121 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 176
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 177 QRQAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 236
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 237 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAG--TNQTDVVQL-DAELLAVEDRGGEH 293
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 294 LASVRFHG----LIREAQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 336
>gi|167749610|ref|ZP_02421737.1| hypothetical protein EUBSIR_00568 [Eubacterium siraeum DSM 15702]
gi|167657363|gb|EDS01493.1| hypothetical protein EUBSIR_00568 [Eubacterium siraeum DSM 15702]
Length = 321
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 3/159 (1%)
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ G + +++ N + P T + + I +F D + + Y I +++ +
Sbjct: 102 SGGGTTRPSSMNGANVVLPNRTEQIEGI--IKQKDPNFSASDLITFTKQVYIDIENAWCK 159
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ + ++ +Y + + + ID + + + Y+T +
Sbjct: 160 RDMTPVRPVMHENLYNTTCKQVQAKIEQGVVYHYESIAIDTAYLTSYERDSQFEYVTAYL 219
Query: 181 VGQFISASYD-KDNLLISSDPEIFGKVIDIWTFVRNIPP 218
+ I D K +I D FVR++
Sbjct: 220 TSRMIDYQVDEKTGKIIRGDKTTRWVQKYKMKFVRSLGV 258
>gi|220925671|ref|YP_002500973.1| import inner membrane translocase subunit Tim44 [Methylobacterium
nodulans ORS 2060]
gi|219950278|gb|ACL60670.1| import inner membrane translocase subunit Tim44 [Methylobacterium
nodulans ORS 2060]
Length = 318
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 13/128 (10%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
+++E + ++ V + +L + F + L + + S V + +
Sbjct: 196 DAFERTLTQVQLAYGAEDVATLRRLATPEMVGYFTEELQANAARGVINRISDVKLQQGDL 255
Query: 165 INASIEENTVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN 222
A E T Y T+ R + ++ ++ + DPE ++WTF R+
Sbjct: 256 SEAWREGPTDYATVAMRYTLRDVTVERGSGRVVGTGDPEAV----EVWTFRRDRGGP--- 308
Query: 223 WVLISTKL 230
W+L + +
Sbjct: 309 WLLSAIQQ 316
>gi|302187827|ref|ZP_07264500.1| Tim44-like domain-contain protein [Pseudomonas syringae pv.
syringae 642]
Length = 280
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 64/221 (28%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRETSQPAQNPVFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN FD + FL+ AR ++++ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFDEQRFLDAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTYIENLQVQLDGVDDRADKTIATLTFSGVSKTSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 278
>gi|254181778|ref|ZP_04888375.1| Tim44-like domain protein [Burkholderia pseudomallei 1655]
gi|184212316|gb|EDU09359.1| Tim44-like domain protein [Burkholderia pseudomallei 1655]
Length = 323
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPF-----SGFFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPALNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRPAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIREAQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|209884542|ref|YP_002288399.1| import inner membrane translocase, subunit Tim44 [Oligotropha
carboxidovorans OM5]
gi|209872738|gb|ACI92534.1| import inner membrane translocase, subunit Tim44 [Oligotropha
carboxidovorans OM5]
Length = 320
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E + ++ A++ + + + L+ + K S V + +
Sbjct: 196 EAFERRLSEVQAAWSNEDTAALQTIATPEMASYLSQDLADNAARGVVNKVSDVKLLQGDL 255
Query: 165 INASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E T Y T+ + + + D+ ++ + +V +IWTF R + +W
Sbjct: 256 AEAWREGPTDYATVAMRFSLVDKTIDRASGRVVEGS-DTPEEVTEIWTFARR---PDTDW 311
Query: 224 VLISTKL 230
L + +
Sbjct: 312 ELSAIQQ 318
>gi|256828118|ref|YP_003156846.1| import inner membrane translocase subunit Tim44 [Desulfomicrobium
baculatum DSM 4028]
gi|256577294|gb|ACU88430.1| import inner membrane translocase subunit Tim44 [Desulfomicrobium
baculatum DSM 4028]
Length = 283
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD ++FL+ A+ +Y + ++ + + + + V+ + + K +
Sbjct: 161 GFDAREFLDGAKAAYTRLQAAWDARDLDDLRQFTSTEVFAEIQSQAEADPNPGKT-EILF 219
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
+ + ++ N T+ D + +V + W F R
Sbjct: 220 L---EASLLEVKAVGNQTIATVLFDTMLR---EDSTSAPAE-------QVREAWHFSRYE 266
Query: 217 PPSNPNWVLISTKLGE 232
+WV+ + E
Sbjct: 267 TGGAKHWVVEGIQQLE 282
>gi|326934094|ref|XP_003213130.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Meleagris
gallopavo]
Length = 341
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 12/145 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R + +F K F A+ Y +S + LV R Y D R
Sbjct: 165 ALRKVKDHDPNFSTKTFPEMAQEIYVEAHNSLANFNKQKLHSLVTERCYPDMV-----RG 219
Query: 147 SNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSD 199
+ K ++ S V + ++ + N +T+R+ + A YD+ L+
Sbjct: 220 NRYKTIRWSFVESLEPPRVVHVRCTSIVNRGNLYGQVTVRMHSRQTLAIYDRFGRLMYGG 279
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F R + W
Sbjct: 280 EQLPKDVLEYVVFERYLVNPYGTWR 304
>gi|320164944|gb|EFW41843.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 499
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 72 DSINELFPIGTRLNKVMRDIVSVYTDFDPKDF-LNEARNSYEAIVDSFFEGKVHAIEKLV 130
DSI+ +F + + V+ +I V +F+ +F ++ + ++++ F+ + A+E+
Sbjct: 332 DSISNIFSP-SEIGMVIGEINRVDPNFNVDEFTIDCEKQIIPILMEAVFKSDLKALEQWC 390
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
++ + + +R++ ++ ++ ++ +++ A + E + Q+ +
Sbjct: 391 HEVCFRRLLEPIKSRRALGVQLEHKVMELNGVELRTAQLMEQGPTLVFIFNMQYTRVLRN 450
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSN--PNWVLI 226
+ +I DP+ R++ + +W +I
Sbjct: 451 SSSEIIEGDPDQILAATYAMALTRDLNVYDTHASWRVI 488
>gi|298489454|ref|ZP_07007465.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156028|gb|EFH97137.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330890590|gb|EGH23251.1| Tim44-like domain-containing protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 280
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRESSQPAQNPIFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL AR ++++ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFNEERFLEAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G S+ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTYIDNLQVQLDGVDDRADKTIATLTFSGVSKSSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 278
>gi|254251433|ref|ZP_04944751.1| hypothetical protein BDAG_00618 [Burkholderia dolosa AUO158]
gi|124894042|gb|EAY67922.1| hypothetical protein BDAG_00618 [Burkholderia dolosa AUO158]
Length = 341
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 73/238 (30%), Gaps = 34/238 (14%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A + ++ + ++ +P +S S +
Sbjct: 124 FAGMMANFIVIALLAMVGIWLIRKFMN---RR----RPQEPAYSVGGASSSGSYSQGSSF 176
Query: 63 GKGKKKDNLDSINELFPIG----------TRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
G + + V + V FD + FL A+ +
Sbjct: 177 QPGSSSNYAGGSSYANEAQRVFGGGAASAAPAAGVAAPALQVPAGFDTEAFLRSAKVYFV 236
Query: 113 AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172
+ ++ +G + I + ++ + L +R + ++ +V + D +++
Sbjct: 237 RLQAAWDQGNLTDIREFTTPEMFAEIKIDLDSR--GNEANQTDVVQL-DAELVAIEDRGI 293
Query: 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + ++W + + W+L +
Sbjct: 294 EQSASVRFHG-LIRESANASAEPFD----------EVWNLSK---SGSQGWLLAGIQQ 337
>gi|190894520|ref|YP_001984813.1| putative import inner membrane translocase, TIM family [Rhizobium
etli CIAT 652]
gi|190700181|gb|ACE94263.1| putative import inner membrane translocase protein, TIM family
[Rhizobium etli CIAT 652]
Length = 333
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 6/118 (5%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + +L + L +N + S V + I A E+
Sbjct: 213 VQTAYGAEDYGTLRRLTTPEAMSYLAEELGENATNGVRNRVSDVKLLQGDIAEAWREDGQ 272
Query: 174 VYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
Y T+ R D ++S D + +IWTFVR W L + +
Sbjct: 273 EYATLAMRYSSIDAMVERDS-GRVVSGDDRRPSESTEIWTFVRKPGGD---WKLAAIQ 326
>gi|239905745|ref|YP_002952484.1| hypothetical protein DMR_11070 [Desulfovibrio magneticus RS-1]
gi|239795609|dbj|BAH74598.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 315
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 14/135 (10%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
FD DFL A+ + + S+ + + IE F + + + + +
Sbjct: 192 PGFDAADFLAGAKALFARMQQSWSKRDLADIEAFATP----AFMADVRKQAAEDPTPAPT 247
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRN 215
V + D K++ + + + PE V ++W F R
Sbjct: 248 DVLLVDAKLLEVRSQGGATIASAYFDVLMR-------EDPKAGQPEQ---VREVWHFTRK 297
Query: 216 IPPSNPNWVLISTKL 230
W L + +
Sbjct: 298 ETVPGDAWKLDAIQQ 312
>gi|167579860|ref|ZP_02372734.1| Tim44-like domain family protein [Burkholderia thailandensis TXDOH]
Length = 324
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 68/247 (27%), Gaps = 50/247 (20%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A ++ + F + + + +
Sbjct: 105 FASMMANVIVIALLAMAGIWLV--------------RKFMNRRGAQQQPAYAGGQPSLNR 150
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT-------------------DFDPKDF 103
G + + + P G FD + F
Sbjct: 151 DHGGYNQDAGAWRQAAPNGAFAGSGSTYAGEAQRVFGGAATAAAPAAAPMVPAGFDTEAF 210
Query: 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK 163
L A+ + + ++ EG + I + ++ + L R +N ++ +V + D +
Sbjct: 211 LRNAKVYFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGR-GAGEN-QTDVVRL-DAE 267
Query: 164 IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
++ + ++R G + ++W + + W
Sbjct: 268 LLAVEDRGGEHFASVRFHG----MIRETQGAAAE-------PFDEVWNLSK---SGSQGW 313
Query: 224 VLISTKL 230
+L +
Sbjct: 314 LLAGIQQ 320
>gi|134296928|ref|YP_001120663.1| import inner membrane translocase subunit Tim44 [Burkholderia
vietnamiensis G4]
gi|134140085|gb|ABO55828.1| import inner membrane translocase, subunit Tim44 [Burkholderia
vietnamiensis G4]
Length = 341
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/236 (12%), Positives = 72/236 (30%), Gaps = 28/236 (11%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A + ++ + ++ +E +S S
Sbjct: 122 FASMMANVIVIALLAMVGIWLIRKFMN---RRRPHEPAYSAGGSASSAGGYAQGSSFQQG 178
Query: 63 GKGKKKDNLDSINELFP--------IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + S + + V FD + FL A+ + +
Sbjct: 179 SGGNYAGSGSSYANEAQSVFGGGAAAAGAAGALGAAPLQVPAGFDTEAFLRSAKVYFVRL 238
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ +G + I + ++ + L +R + ++ +V + D +++
Sbjct: 239 QAAWDQGNMADIREFTTPEMFAEIKIDLDSR--GNEANQTDVVQL-DAELVAIEDRGIEQ 295
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + ++W ++ W+L +
Sbjct: 296 AASVRFHG-LIRESANASAAPFE----------EVWNLSKSGGQG---WLLAGIQQ 337
>gi|262369516|ref|ZP_06062844.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315584|gb|EEY96623.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 321
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 71/230 (30%), Gaps = 37/230 (16%)
Query: 11 FLILLFAFITFFVFLQLRGVLGKKTGNEK-----PFSGFFSGKYVF-----SKRDERGII 60
ILL A + FF+F +K G +K P++ + R
Sbjct: 117 IWILLAAAVAFFIF--------RKMGAKKKVAANPYAPNNGSTQAPFGQQAAPRTSNDNS 168
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + + P G + +P FL AR + I
Sbjct: 169 NIFGQSVGGSAATPQNNAPFGAAYTNSGSQLPD---GTEPAAFLRIARQRFNHIQSMNTA 225
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ I++ + +YQ + + + + ++ + +++ E + +++R
Sbjct: 226 SNISEIQRYLTPDLYQSMYQDIMANQDQDV---AEFSNLN-AMVADSATENSQYVVSVRF 281
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + ++W FV+ + +W++ +
Sbjct: 282 -----------TGTVSEDLNSLPQPFAEVWHFVKPAGSTQ-DWLVAGIQQ 319
>gi|167617935|ref|ZP_02386566.1| Tim44-like domain family protein [Burkholderia thailandensis Bt4]
Length = 252
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 38/241 (15%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A +R + ++ ++P ++G RD G
Sbjct: 33 FASMMANVIVIALLAMAG---IWLVRKFMNRRGAQQQP---AYAGGQPSLNRDHGGY--N 84
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDI-------------VSVYTDFDPKDFLNEARN 109
+ G+ + + V FD + FL A+
Sbjct: 85 QDAGAWRQAAPNDAFAGSGSTYAGEAQRVFGGAATAAAPAAAPMVPAGFDTEAFLRNAKV 144
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ EG + I + ++ + L R +N ++ +V + D +++
Sbjct: 145 YFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGR-GAGEN-QTDVVRL-DAELLAVED 201
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ ++R G + ++W + + W+L +
Sbjct: 202 RGGEHFASVRFHG----MIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQ 247
Query: 230 L 230
Sbjct: 248 Q 248
>gi|91778033|ref|YP_553241.1| hypothetical protein Bxe_B2096 [Burkholderia xenovorans LB400]
gi|91690693|gb|ABE33891.1| Putative membrane protein [Burkholderia xenovorans LB400]
Length = 318
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 67/225 (29%), Gaps = 29/225 (12%)
Query: 7 DSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGK 66
++ +++ A + F F+ +P + G + + + +
Sbjct: 119 NALLIGLVVVAGVMLFRFI---------ANRRRPDLAYGHGPANRQQTNGAPFLNQVREA 169
Query: 67 KKD-NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
+ D NL T ++ FL A+ + + ++ +
Sbjct: 170 RPDTNLRDWPRTTMDATGAASSVKAPELAD----QAAFLVSAKAMFMRLQGAWDRNEQGD 225
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI 185
+ +L ++ L R + V + +++N + +++R GQ
Sbjct: 226 LFELTTPEMFARLKQDLEIR---GHEPSRTDVTQLEAEVLNTESSADETLVSVRFYGQMR 282
Query: 186 SASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D +I +IW VR + W L +
Sbjct: 283 -----------EDDAQIVQPFQEIWNMVRR-AHGDEGWRLAGIQQ 315
>gi|83311911|ref|YP_422175.1| hypothetical protein amb2812 [Magnetospirillum magneticum AMB-1]
gi|82946752|dbj|BAE51616.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 347
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 59/188 (31%), Gaps = 19/188 (10%)
Query: 51 FSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNS 110
F R + + + + + + G + +FD + +
Sbjct: 173 FRGRSQPAVPAGNPYMRTAPGEHVEPMIGAGPVQ-------PRIEREFDAS---GGDQEA 222
Query: 111 YEAIV----DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
+ I+ ++ +G + +++ V ++ +S S K V + +
Sbjct: 223 FTEILQGVQKAWSDGNLLQLKRFATPEVVAFLSEDMSRNASEGVANKVENVTLLRGDVSE 282
Query: 167 ASIEENTVYIT--IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
+ E Y+T + D + +P + WTFVR + W+
Sbjct: 283 SWSEGGFDYLTAILTFSCNDYMVRLD-TGAVADGNPHATVTHTEAWTFVR--SSNGGRWL 339
Query: 225 LISTKLGE 232
L + + +
Sbjct: 340 LSAVQQVQ 347
>gi|167822777|ref|ZP_02454248.1| Tim44-like domain protein [Burkholderia pseudomallei 9]
Length = 225
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 7 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 62
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 63 QRQAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 122
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 123 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAG--TNQTDVVQL-DAELLAVEDRGGEH 179
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 180 LASVRFHG----LIREAQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 222
>gi|296160985|ref|ZP_06843796.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
Ch1-1]
gi|295888684|gb|EFG68491.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
Ch1-1]
Length = 330
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 65/193 (33%), Gaps = 16/193 (8%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK-VMRDIVSVYTD 97
+ S G + + + + + L P G L+ + +V
Sbjct: 149 RKRDTAQPAYAGGSPSLNSGGMGYSQEPRYSAPPTGSYLEPQGNPLSTPTINAAPAVPAG 208
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
FD + FL A+ + + ++ G I + ++ + LS+R + + ++ +V
Sbjct: 209 FDSEAFLRNAKVYFVRLQAAWDVGNTEDIREFTTPEMFAEVKVDLSSRGA--ETNQTDVV 266
Query: 158 GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP 217
++ +++ N + ++R L+ + +++W +
Sbjct: 267 QLN-AELLGVEERANEYFASVRFS-----------GLIREAPGAAAEPFVEVWNLSKANR 314
Query: 218 PSNPNWVLISTKL 230
W+L +
Sbjct: 315 AGE-GWLLAGIQQ 326
>gi|28872622|ref|NP_795241.1| hypothetical protein PSPTO_5517 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|302133167|ref|ZP_07259157.1| hypothetical protein PsyrptN_17334 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28855878|gb|AAO58936.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|331017794|gb|EGH97850.1| hypothetical protein PLA106_17269 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 280
Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 64/221 (28%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRETSQPAQNPIFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL+ AR ++++ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFNEERFLDAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTFIDNLHVQLDGLDDRADKTIATLTFSGVSKTSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGENQP-WLVAGIRQ 278
>gi|237749468|ref|ZP_04579948.1| hypothetical protein OFBG_01949 [Oxalobacter formigenes OXCC13]
gi|229380830|gb|EEO30921.1| hypothetical protein OFBG_01949 [Oxalobacter formigenes OXCC13]
Length = 305
Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 29/233 (12%)
Query: 4 IKMD-----SGDFLILLFAFITFF-VFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDER 57
M +G +L + FF + +R + TG KP + ++
Sbjct: 94 SHMGIGGDFAGMISTVLMLALIFFAIRFLMR----RFTGRGKP-QDQTAYASQYNDNGYN 148
Query: 58 GIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDS 117
T G + + N+ G+ + I DFD FL A++ Y + +
Sbjct: 149 QSSTPEIGSGLPHQYAGNQTVNTGSGMQNDNWGIPV---DFDVPAFLRAAKSYYIRMQAA 205
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT 177
+ + +H I + ++ + L R N+ + +V + D +++ N +
Sbjct: 206 WDKADIHDIHEFTTPEMFAEMKLQLQER-GPGPNI-TDVVSL-DAELLGIETLNNEYMAS 262
Query: 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ G + + ++W R I WVL +
Sbjct: 263 VKFSG----MIRESEGAPAE-------PFAEVWNMTRPI-SKEGGWVLAGIQQ 303
>gi|254504893|ref|ZP_05117044.1| Tim44-like domain family [Labrenzia alexandrii DFL-11]
gi|222440964|gb|EEE47643.1| Tim44-like domain family [Labrenzia alexandrii DFL-11]
Length = 335
Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 54/195 (27%), Gaps = 24/195 (12%)
Query: 37 NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT 96
E+ + + G D T
Sbjct: 160 FERAPNQPAPDQNASQATPFSFGGGGASGSTSQTFDQPATQPYEATAA------------ 207
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
D F + + ++ A+ +L + L S K S
Sbjct: 208 --DLDRF----EDMLSEVQSAYASEDYAALRQLATPEAMSYLAEELGELASAGKKNVVSD 261
Query: 157 VGIDDMKIINASIEENTVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVR 214
V + + + E Y+T+ R A D +IS DP+ + ++WTFVR
Sbjct: 262 VKLLQGDVAESWNENGNDYVTVAMRYSAVDYIAKRDSH-EVISGDPDAPSESTEVWTFVR 320
Query: 215 NIPPSNPNWVLISTK 229
+ W+L + +
Sbjct: 321 SSGGD---WLLSAIQ 332
>gi|115352833|ref|YP_774672.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria AMMD]
gi|115282821|gb|ABI88338.1| import inner membrane translocase, subunit Tim44 [Burkholderia
ambifaria AMMD]
Length = 344
Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A I +R + ++ E +S S
Sbjct: 124 FASMMANVIVIALLAMIG---IWLVRKFMNRRRSQEPAYSVGGSASSSGGYSQSPSFQQG 180
Query: 63 GKGKKKDNLDSINELFPIG---------TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
G S G + + V FD + FL A+ +
Sbjct: 181 STGNNYAGSGSSYANEAQGVFGGGAAAAGAAGAMAAAPLQVPAGFDTEAFLRSAKVYFVR 240
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ +G + I + ++ + L +R + ++ +V + D +++
Sbjct: 241 LQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNEANQTDVVQL-DAELVAIEDRGIE 297
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + + ++W + + W+L +
Sbjct: 298 QSASVRFHG-LIRESANAPAAPLD----------EVWNLSK---SGSQGWLLAGIQQ 340
>gi|172061690|ref|YP_001809342.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria MC40-6]
gi|171994207|gb|ACB65126.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria MC40-6]
Length = 344
Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A I +R + ++ E +S S
Sbjct: 124 FASMMANVIVIALLAMIG---IWLVRKFMNRRRSQEPAYSVGGSASSSGGYSQSPSFQQG 180
Query: 63 GKGKKKDNLDSINELFPIG---------TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
G S G + + V FD + FL A+ +
Sbjct: 181 STGNNYAGSGSSYANEAQGVFGGGAAAAGAAGAMAAAPLQVPAGFDTEAFLRSAKVYFVR 240
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ +G + I + ++ + L +R + ++ +V + D +++
Sbjct: 241 LQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNEANQTDVVQL-DAELVAIEDRGIE 297
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + + ++W + + W+L +
Sbjct: 298 QSASVRFHG-LIRESANAPAAPLD----------EVWNLSK---SGSQGWLLAGIQQ 340
>gi|213968509|ref|ZP_03396652.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301384751|ref|ZP_07233169.1| hypothetical protein PsyrptM_19042 [Pseudomonas syringae pv. tomato
Max13]
gi|302062457|ref|ZP_07253998.1| hypothetical protein PsyrptK_20918 [Pseudomonas syringae pv. tomato
K40]
gi|213926797|gb|EEB60349.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 280
Score = 58.4 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 64/221 (28%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRETSQPAQNPIFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL+ AR ++++ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFNEERFLDAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTFIDNLHVQLDGLDDRADKTIATLTFSGVSKTSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGENQP-WLVAGIRQ 278
>gi|257140227|ref|ZP_05588489.1| Tim44-like domain-contain protein [Burkholderia thailandensis E264]
Length = 324
Score = 58.4 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 38/241 (15%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A +R + ++ ++P ++G RD G
Sbjct: 105 FASMMANVIVIALLAMAG---IWLVRKFMNRRGAQQQP---AYAGGQPSLNRDHGGY--N 156
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDI-------------VSVYTDFDPKDFLNEARN 109
+ G+ + + V FD + FL A+
Sbjct: 157 QDAGAWRQAAPNDAFAGSGSTYAGEAQRVFGGAATAAAPAAAPMVPAGFDTEAFLRNAKV 216
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ EG + I + ++ + L R +N ++ +V + D +++
Sbjct: 217 YFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGR-GAGEN-QTDVVRL-DAELLAVED 273
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ ++R G + ++W + + W+L +
Sbjct: 274 RGGEHFASVRFHG----MIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQ 319
Query: 230 L 230
Sbjct: 320 Q 320
>gi|134279597|ref|ZP_01766309.1| Tim44 domain protein [Burkholderia pseudomallei 305]
gi|134248797|gb|EBA48879.1| Tim44 domain protein [Burkholderia pseudomallei 305]
Length = 323
Score = 58.4 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPF-----SGFFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPALNRGHDGYSQDAGI 160
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRPAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|83718851|ref|YP_441111.1| Tim44-like domain-contain protein [Burkholderia thailandensis E264]
gi|83652676|gb|ABC36739.1| Tim44-like domain family [Burkholderia thailandensis E264]
Length = 340
Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 38/241 (15%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A +R + ++ ++P ++G RD G
Sbjct: 121 FASMMANVIVIALLAMAG---IWLVRKFMNRRGAQQQP---AYAGGQPSLNRDHGGY--N 172
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDI-------------VSVYTDFDPKDFLNEARN 109
+ G+ + + V FD + FL A+
Sbjct: 173 QDAGAWRQAAPNDAFAGSGSTYAGEAQRVFGGAATAAAPAAAPMVPAGFDTEAFLRNAKV 232
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ EG + I + ++ + L R +N ++ +V + D +++
Sbjct: 233 YFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGR-GAGEN-QTDVVRL-DAELLAVED 289
Query: 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229
+ ++R G + ++W + + W+L +
Sbjct: 290 RGGEHFASVRFHG----MIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQ 335
Query: 230 L 230
Sbjct: 336 Q 336
>gi|71735681|ref|YP_277225.1| Tim44-like domain-contain protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257485679|ref|ZP_05639720.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289625508|ref|ZP_06458462.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289649763|ref|ZP_06481106.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|71556234|gb|AAZ35445.1| Tim44-like domain family [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320321766|gb|EFW77864.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331516|gb|EFW87456.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330870932|gb|EGH05641.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330880967|gb|EGH15116.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330986943|gb|EGH85046.1| Tim44-like domain-contain protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011967|gb|EGH92023.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 280
Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRESSQPAQNPIFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL AR ++++ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFNEERFLEAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G S+ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTYIDNLQVQLDGVDDRADKTIATLTFSGVSKSSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 278
>gi|222081641|ref|YP_002541006.1| hypothetical protein Arad_8042 [Agrobacterium radiobacter K84]
gi|221726320|gb|ACM29409.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 331
Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ + +L + L + + + + I + E+N
Sbjct: 211 VQSAYGAEDYATLRRLTTPEAMSYLAEELGENATKGVRNSVTDIRLLQGDIAESWREDNA 270
Query: 174 VYITI--RIVGQFISASYD-KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ R + A D K L+ D + +IWTF+R W+L + +
Sbjct: 271 EYATLAMRYSS--VDALLDRKTGRLVDGDDRNASETTEIWTFMRKPGSD---WILSAIQG 325
Query: 231 GE 232
E
Sbjct: 326 TE 327
>gi|167901351|ref|ZP_02488556.1| Tim44-like domain protein [Burkholderia pseudomallei NCTC 13177]
Length = 251
Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPF-----SGFFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 33 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPALNRGHDGYSQDAGI 88
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 89 QRPAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 148
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 149 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 205
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 206 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 248
>gi|307726779|ref|YP_003909992.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1003]
gi|307587304|gb|ADN60701.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1003]
Length = 322
Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 62/227 (27%), Gaps = 24/227 (10%)
Query: 5 KMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK 64
+M S ++ + + + N + + +
Sbjct: 116 QMLSNML-LIGLVVVAGVMLFRF-------IANRRRPDLAYGHGAASRSQSNGMPFANQN 167
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKV 123
G+ + + + V D + + A++ + + ++ +
Sbjct: 168 GQARPDSSFFGSQRTAANQTAAAGVFNAPVQPLGLDQAELVASAKSMFMRLQGAWDRNEQ 227
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
+ +L ++ L R + + V D +++ + ++++R GQ
Sbjct: 228 GDLFELTTPEMFAQLKRDLEGRGNQPNRTE---VPQLDAEVLGVESTADETFVSVRFYGQ 284
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D ++W VR+ N W L +
Sbjct: 285 MR-----------EDDAPTAQPFQEVWNIVRSAHSGN-TWRLAGIQQ 319
>gi|218887945|ref|YP_002437266.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218758899|gb|ACL09798.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 308
Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 27/218 (12%)
Query: 15 LFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI 74
L + F+ L+ + G+ P SG+ +R+ G D L +
Sbjct: 117 LLLALVAFMALKFFA---ARRGS-APAPASASGQPGGMRREADYGAQSGSSAGWDALRNA 172
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
+ + + FD ++FL A+ +Y + S+ + I + +
Sbjct: 173 PAAAADAQPASPGIPE------GFDTEEFLRGAKLAYNRLQTSWDRRDLDDIAQFTTPEI 226
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNL 194
++ + + + V + +++ + E++ T+
Sbjct: 227 L----KDITQQAQEDPGPSRTEVLYCNASVLSVTEEKDRSVATVFFDVLMRE-------- 274
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+ + +V ++W FVR N W L + E
Sbjct: 275 --DAQADAPSQVREVWHFVR---TGNEMWRLDGIQQVE 307
>gi|118782853|ref|XP_312541.3| AGAP002412-PA [Anopheles gambiae str. PEST]
gi|116129764|gb|EAA08051.3| AGAP002412-PA [Anopheles gambiae str. PEST]
Length = 335
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%)
Query: 38 EKPF----SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
E+PF +G Y+ + D R +G K+ E T+ +R I +
Sbjct: 95 ERPFHISCTGGVFEPYIPPEGDGRMSAISREGAKQKI-----EQLEKKTKSMMAIRKIRN 149
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
DF+P +F A++ Y + E + + ++V R Y + +++ K ++
Sbjct: 150 YDEDFEPPEFATLAQDIYIEAHKTLCEKNKYKLREIVTERAYPELMHNVAD-----KTIR 204
Query: 154 SSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
+ + + + +EN +T+R Q A YD+ L+ +
Sbjct: 205 WQFLKSLEPPRVVHARCTDVITKENIFAQVTVRFHSQQTLAIYDRFGRLMHGSETVAKDC 264
Query: 207 IDIWTFVRNIPPSNPNWVL 225
I+ F +++ W L
Sbjct: 265 IEYVVFEKHLANEYGVWRL 283
>gi|56753329|gb|AAW24868.1| SJCHGC06217 protein [Schistosoma japonicum]
Length = 326
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 78/218 (35%), Gaps = 29/218 (13%)
Query: 27 LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI-------NELFP 79
LR L ++ G P + + G + +L S +EL
Sbjct: 62 LRRRL-RRNGMLPPLLFYDRPINIGHTGQIFDPYVPPDGDGQTSLLSPKRLTHLKDELVD 120
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFF-----EGKVHAIEKLVDSRV 134
G ++ I S F K F +EA N Y +++ + +LV +
Sbjct: 121 KGKNYKDLLL-IRSHEPSFKSKPFASEAENIY---IEAHNLLQNYRQNESRLFELVTEKA 176
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVG-IDDMKIINASIEE------NTVYITIRIVGQFISA 187
D L R ++ VG I+ K+++ +E + +T+R Q I +
Sbjct: 177 LVDMTADLRLR-----TLRWKFVGNIEPPKVVHIRCKEYLSKGNHYAQVTVRFYTQQILS 231
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
Y++ L+ +P+ V++ F ++I W L
Sbjct: 232 IYNRFGRLLYGNPDTAVDVLEYVVFEKHISDEYGTWRL 269
>gi|262278111|ref|ZP_06055896.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258462|gb|EEY77195.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 329
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 22/206 (10%)
Query: 31 LGKK---TGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL-DSINELFPIGTRLNK 86
LG K GN P++ G+ F + G + S+
Sbjct: 141 LGAKKKLAGN-NPYAPNNGGQNPFGRSAAPQATPRNAGDNTNIFGQSVTGGAATQAPFGG 199
Query: 87 VMRDIVSVYTDFD-PKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
V + D P FL AR + I + I + + +Y + +
Sbjct: 200 VTTSNGNQLPDGSEPAAFLRIARQRFNHIQSMNTASNIEEIRRYLTPELYTSMYNDIMEN 259
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+ + + ++ M + +A+ E +++R + +
Sbjct: 260 QDQDV---AEFSNLNAMVVDSAN-ENGQYVVSVRF-----------TGNVSEDLNSLPQP 304
Query: 206 VIDIWTFVRNIPPSNPNWVLISTKLG 231
+IW FV++ +WV+ +
Sbjct: 305 FTEIWHFVKSAGSQQ-DWVVAGIQQA 329
>gi|189184596|ref|YP_001938381.1| hypothetical protein OTT_1689 [Orientia tsutsugamushi str. Ikeda]
gi|189181367|dbj|BAG41147.1| hypothetical protein OTT_1689 [Orientia tsutsugamushi str. Ikeda]
Length = 211
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 34/147 (23%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+ + S F+ F N A N + I+++ I L+D R F
Sbjct: 93 LIKLKSKVPSFNINRFYNTAINVIKMIIEAVQNANYKTIFSLLDKRFVDQF--------- 143
Query: 148 NEKNVKSSLVGI--DDMKIINASIE--ENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
+ S V I D + +++ N V+I IRI I +
Sbjct: 144 --HQISSKYVNIHVDSINFKLSNLNSLGNNVFIKIRIE--------------IDGN---- 183
Query: 204 GKVIDIWTFVRNIPPSNPNWVLISTKL 230
K+ + WTF +NI P W L + +
Sbjct: 184 -KLKEEWTFSKNITTPGPQWYLSNIEE 209
>gi|172087484|ref|XP_001913284.1| import inner membrane translocase subunit TIM44-like protein
[Oikopleura dioica]
gi|42601412|gb|AAS21436.1| import inner membrane translocase subunit TIM44-like protein
[Oikopleura dioica]
Length = 388
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDFNDS 141
N ++ I V FD + F+ + E I +++ V IE Q F +
Sbjct: 229 NDTIKAIRQVDKKFDQEAFVQFLES--EMIPIILEAKAINDVAVIEDWCLDAPAQRF--A 284
Query: 142 LSTRKSNEKNVKS--SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
+ R+ + + + + ++I++ ++ +N I + A DKD +I +
Sbjct: 285 IKHREQAKNKITYYEKTINLQKLEILDGTVHDNMPAFQISFETNTLMAYTDKDGNVIEQE 344
Query: 200 ----PEIFGKVIDIWTFVRNIPPSNPN--WVLISTKL 230
P+ K +W+ R+ P+ W ++ +
Sbjct: 345 GYPKPDEVYKSYHVWSVCRDPMEPEPSAAWRVLECET 381
>gi|91976179|ref|YP_568838.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB5]
gi|91682635|gb|ABE38937.1| import inner membrane translocase, subunit Tim44 [Rhodopseudomonas
palustris BisB5]
Length = 331
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 24/197 (12%)
Query: 38 EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTD 97
++ + + Y + G + P L +I
Sbjct: 153 QRRKNPQPAPAYASNAGPTVGPGPEPSYRTGFGFGGGGGSAPNAPPL-----EIKPEDY- 206
Query: 98 FDPKDFLNEARNSYEAIVD----SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
++E ++ ++ V + +L + F L+ K+ K
Sbjct: 207 -----------EAFERLLGDVQSAWSNEDVEKLNQLTTPEMASYFAKDLAENKAANDINK 255
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
S V + + + E T Y T+ + + + ++ + S E +V ++WTF
Sbjct: 256 VSDVKLLQGDLAESWREGETDYATVAMRFSLVDKTLERGTNRLVSGSETPIEVTEVWTFA 315
Query: 214 RNIPPSNPNWVLISTKL 230
R W L + +
Sbjct: 316 RRSGAD---WELSAIQQ 329
>gi|71033659|ref|XP_766471.1| mitochondrial import inner membrane translocase [Theileria parva
strain Muguga]
gi|68353428|gb|EAN34188.1| mitochondrial import inner membrane translocase, putative
[Theileria parva]
Length = 381
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T L +R++ + F+ D + + +V+S+ +G A++ + N
Sbjct: 224 DTSLASALREMKRLDPSFNLPDLVELVEHVIAPHVVESYLKGDGEALKLHCGEVAFNILN 283
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLLISS 198
S+ R + + S++ + ++++ ++E ++ Q I+ D + +
Sbjct: 284 TSIKERNLQKLVLDPSILILKNVELKGGMKVKEGDPWLIFNFTTQQINCLRDTKGKVCAG 343
Query: 199 DPEIFGKV 206
+ +V
Sbjct: 344 QIDDIREV 351
>gi|291557689|emb|CBL34806.1| Tim44-like domain [Eubacterium siraeum V10Sc8a]
Length = 309
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 1/139 (0%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
R ++ I +F D + + Y I +++ + + + ++ +Y
Sbjct: 108 PNRTEQIEGIIKQKDPNFSASDLITFTKQVYIDIENAWCKRDMTPVRPVMHENLYNTTCK 167
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD-KDNLLISSD 199
+ + + ID + + + Y+T + + I D K +I D
Sbjct: 168 QVQAKIEQGVVYHYESIAIDTAYLTSYERDSQFEYVTAYLTSRMIDYQVDEKTGKIIRGD 227
Query: 200 PEIFGKVIDIWTFVRNIPP 218
FVR++
Sbjct: 228 KTTRWVQKYKMKFVRSLGV 246
>gi|221068939|ref|ZP_03545044.1| import inner membrane translocase subunit Tim44 [Comamonas
testosteroni KF-1]
gi|220713962|gb|EED69330.1| import inner membrane translocase subunit Tim44 [Comamonas
testosteroni KF-1]
Length = 332
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 74/235 (31%), Gaps = 36/235 (15%)
Query: 15 LFAF-ITFFVFLQLRGVLGKK------TGNEKPFS----GFFSGKYVFSKRDERGIITLG 63
L A I V + +R ++ N PF+ G G + + +G
Sbjct: 113 LLAMVIMVVVGMIMR----RRKPAPAMQSNHSPFAFQGAGNLGGDANAPQARQYNPEKVG 168
Query: 64 KGKKKDNLD--SINELFPI--GTRLNKVMR--DIVSVYTDFDPKDFLNEARNSYEAIVDS 117
+ I E G+ + + V TDFD + FL A+ ++ + +
Sbjct: 169 NDASARPWEQNHIPEAAAAAGGSMIGSALSGSQNWGVPTDFDAEGFLTAAKRNFVTLQSA 228
Query: 118 FFEGKVHAIEKLVDSRVYQDFNDSLSTRKS--NEKNVKSSLVGIDDMKIINASIEENTVY 175
+ + + ++ + + LS R+S + + ++ I D +++ N
Sbjct: 229 WDRSDITTLRSMMTDEMLSEIRSQLSERESQRAGEPNHTDVLMI-DAQLLGIEDLGNGYM 287
Query: 176 ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ ++ ++W + W++ +
Sbjct: 288 ASVEFS-----------GMIREEASAGPSPFREVWNMTKP-KSGASGWLVAGVQA 330
>gi|330970256|gb|EGH70322.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 281
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 68/221 (30%), Gaps = 36/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + + K G + +
Sbjct: 95 LFDILIMGLIA-FLIFR---------------FIARRRQQQQPKMAAAGAPPYQRETSQP 138
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ I G+ +++ F+ + FL+ AR ++++ + + ++ I +
Sbjct: 139 AQNPI-----FGSSSPASSAPVINAPAWFNEQRFLDAARGHFQSLQEHWDANEMDKIAEF 193
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 194 VTPQMLQFLK---KERADLGDGFQSTFIENLQVQLDGVDDRADKTIATLTFSGVSKTSRF 250
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 251 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 279
>gi|91781796|ref|YP_557002.1| hypothetical protein Bxe_A4049 [Burkholderia xenovorans LB400]
gi|91685750|gb|ABE28950.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 330
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 60/166 (36%), Gaps = 16/166 (9%)
Query: 66 KKKDNLDSINELFPIGTRLNK-VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+ + + L P G L+ + +V FD + FL A+ + + ++ G
Sbjct: 176 PRYTAPPTGSYLEPQGNPLSTPAINTAPAVPAGFDSEAFLRNAKVYFVRLQAAWDVGNTE 235
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
I + ++ + LS+R + + ++ +V ++ +++ N + ++R
Sbjct: 236 DIREFTTPEMFAEVKVDLSSRGA--ETNQTDVVQLN-AELLGVEERANEYFASVRFS--- 289
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
L+ + +++W + W+L +
Sbjct: 290 --------GLIREAPGAAAEPFVEVWNLSKANRAGE-GWLLAGIQQ 326
>gi|330952408|gb|EGH52668.1| Tim44-like domain-containing protein [Pseudomonas syringae Cit 7]
Length = 280
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRETSQPAQNPIFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL+ AR ++++ + ++ I +
Sbjct: 151 AAPVINAPA------------------WFNEQRFLDAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + ++++ + T+ G ++ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTYIENLNVQLDGVDDRADKTIATLTFSGVSKTSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 250 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 278
>gi|115920949|ref|XP_793386.2| PREDICTED: similar to MGC53772 protein [Strongylocentrotus
purpuratus]
gi|115935455|ref|XP_001189066.1| PREDICTED: similar to MGC53772 protein [Strongylocentrotus
purpuratus]
Length = 338
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 8/141 (5%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY----QDFNDSLST 144
R I +F DF +A+ Y ++ + H + LV + Y F
Sbjct: 146 RKIRQFEPEFTTTDFAWKAQQIYVDAHNALQDFDRHLLHSLVTEKCYPEMIAGFRYKTIR 205
Query: 145 RKSNEKNVKSSLVGIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDPEIF 203
K E K +V + +IN + N +T+R + A YD+ ++ ++
Sbjct: 206 WKMLESIEKPRIVHMRCTDMIN---KGNIYGQVTVRFHTRQTLAIYDRFGRIMVGSEDVL 262
Query: 204 GKVIDIWTFVRNIPPSNPNWV 224
V++ F +++P W
Sbjct: 263 KDVLEYVVFEKHLPHRYGTWR 283
>gi|330878142|gb|EGH12291.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 281
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 67/221 (30%), Gaps = 36/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + + K G + +
Sbjct: 95 LFDILIMGLIA-FLIFR---------------FIARRRQQQQPKMAAAGAPPYQRETSQP 138
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ I + +++ F+ + FL+ AR ++++ + ++ I +
Sbjct: 139 TQNPIFGSSSPASA-----APVINAPAWFNEERFLDAARGHFQSLQQHWDANEMDKIAEF 193
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + ++++ + T+ G ++ +
Sbjct: 194 VTPQMLQFLK---KERADLGDGFQSTYIENLNVQLDGVDDRADKTIATLTFSGVSKTSRF 250
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 251 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 279
>gi|307214389|gb|EFN89460.1| Probable 39S ribosomal protein L45, mitochondrial [Harpegnathos
saltator]
Length = 334
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 19/150 (12%)
Query: 87 VMRDIVSVYTDFDPKDFLNEA----RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+R I S F F+ EA + +YEA+ + EG+ ++ V Y ++
Sbjct: 139 AIRKIKSFDDMFKTSHFIEEAIDIYKKAYEAL--AAKEGEEKLLQ-YVTETAYPKMIHNM 195
Query: 143 STRKSNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLL 195
K + + + M+ + +EN IT+R Q I A YD+ L
Sbjct: 196 MD-----KTIHWKFLESLEPARVVHMRTTDVITKENVFAQITVRFHTQQILAIYDRFGRL 250
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
I + V++ F +++ W +
Sbjct: 251 IQGSEILRKDVLEYIVFEKHLANEYGIWRI 280
>gi|195054150|ref|XP_001993989.1| GH22480 [Drosophila grimshawi]
gi|193895859|gb|EDV94725.1| GH22480 [Drosophila grimshawi]
Length = 353
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RGV + E+PF +G YV + D + I G K+ E ++
Sbjct: 79 RGVFPPRPWMERPFHISCTGGIFEPYVPPEGDGKKSIITTSGAKQK-----FEFLEKKSK 133
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S F +F + A++ Y + + + I + V R Y + ++
Sbjct: 134 SMLAVRKIRSYEESFSSDEFGSYAQDIYISAHTHMAAKEKYKIREFVTERCYPEMMHNVK 193
Query: 144 TRKSNEKNVKSSLV-GIDDMKIINAS------IEENTVYITIRIVGQFISASYDKDNLLI 196
K + + ++ ++++A E IT+R Q + A YD+ L+
Sbjct: 194 D-----KTIHWRFLQSLEPPRLVHARCTEVITKENQFAQITVRFHTQQMLAIYDRFGRLM 248
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W L
Sbjct: 249 HGSEILTKDVLEYVVFEKHISNEYGQWRL 277
>gi|229593438|ref|YP_002875557.1| hypothetical protein PFLU6076 [Pseudomonas fluorescens SBW25]
gi|229365304|emb|CAY53654.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 289
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 34/221 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ A I F+ + F K + ++K
Sbjct: 101 IFDILIMAVIA-FLVFR--------------FIAARRRKQQEHLAPAGAPMQREVFEQKP 145
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ SI G+ R +++ F+ + F+ AR+ ++++ + ++ I +
Sbjct: 146 AMGSIFG----GSAAPAAARPVINAPAWFNEERFVEAARSHFQSLQQHWDANEMDKISEF 201
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ + R +S+ + +++ + T+ G ++ +
Sbjct: 202 VTPQLLEFLKR---ERADLGDAFQSTYIDDLRVQLEGVDDRADKTIATLTFSGVSKTSRF 258
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 259 D-QGEVFSES----------WNMERAQGDNQP-WLVAGIRQ 287
>gi|170691129|ref|ZP_02882295.1| import inner membrane translocase subunit Tim44 [Burkholderia
graminis C4D1M]
gi|170144378|gb|EDT12540.1| import inner membrane translocase subunit Tim44 [Burkholderia
graminis C4D1M]
Length = 324
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/230 (11%), Positives = 66/230 (28%), Gaps = 28/230 (12%)
Query: 5 KMDSGD--FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
+M S +++ A + F F+ +P + G S+ +
Sbjct: 116 QMLSNMLLIGLVVMAGVMLFRFI---------ANRRRPDLAYGQGAASRSQGNGSPFQHP 166
Query: 63 GKGKKKDNLDSI--NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
+ + + + S D + + A+ + + ++
Sbjct: 167 NQNGQARPDTNFFGTQRAATNPVAATGAFSAPSQPLGLDQAELVTSAKTMFMRLQRAWDA 226
Query: 121 GKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
+ + +L ++ L R S + V D +++ N ++++R
Sbjct: 227 NEQGDLFELTTPEMFAQLKRDLEGRGSQPSRTE---VPQLDAEVLGVESTANETFVSVRF 283
Query: 181 VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
GQ D ++W VR+ + W L +
Sbjct: 284 YGQMR-----------EDDAPTAQPFQEVWNIVRSAHTGD-TWRLAGIQQ 321
>gi|313216757|emb|CBY38005.1| unnamed protein product [Oikopleura dioica]
gi|313227382|emb|CBY22529.1| unnamed protein product [Oikopleura dioica]
Length = 393
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDFNDS 141
N ++ I V FD + F+ + E I +++ V IE Q F +
Sbjct: 234 NDTIKAIRQVDKKFDQEAFVQFLES--EMIPIILEAKAINDVAVIEDWCLDAPAQRF--A 289
Query: 142 LSTRKSNEKNVKS--SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD 199
+ R+ + + + + ++I++ ++ +N I + A DKD +I +
Sbjct: 290 IKHREQAKNKITYYEKTINLQKLEILDGTVHDNMPAFQISFETNTLMAYTDKDGNVIEQE 349
Query: 200 ----PEIFGKVIDIWTFVRNIPPSNPN--WVLISTKL 230
P+ K +W+ R+ P+ W ++ +
Sbjct: 350 GYPKPDEVYKSYHVWSVCRDPMEPEPSAAWRVLECET 386
>gi|46201583|ref|ZP_00054758.2| COG4395: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 343
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 12/156 (7%)
Query: 83 RLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV----DSFFEGKVHAIEKLVDSRVYQDF 138
+ + + +FDP + ++ I+ ++ +G + ++++ V
Sbjct: 194 PMISGAPPLARIEKEFDPS---GNDQEAFTEILLGVQQAWSDGNLLSLKRFATPEVVSFL 250
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT--IRIVGQFISASYDKDNLLI 196
++ +S S K V + + + E Y+T + D +
Sbjct: 251 SEDMSRNASEGIANKVENVTLLKGDVSESWSEGGFDYLTAILTFSCNDYMVRLD-TGAVA 309
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
+P + WTF+R+ W+L + + +
Sbjct: 310 EGNPRATVTHTEAWTFMRSTNGG--RWLLSAVQQVQ 343
>gi|302191653|ref|NP_001180514.1| 39S ribosomal protein L45, mitochondrial [Gallus gallus]
Length = 296
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 12/145 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R + +F K F A+ Y +S + LV R Y D R
Sbjct: 120 ALRKVKDHDPNFSTKTFPEVAQEIYVEAHNSLANFNKQKLHSLVTERCYPDMV-----RG 174
Query: 147 SNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSD 199
+ K ++ S V + ++ + + N +T+R+ + A YD+ L+
Sbjct: 175 NRYKTIRWSFVESLEPPRVVHVRCTSVVNQGNLYGQVTVRMHTRQTLAIYDRFGRLMYGG 234
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F R + W
Sbjct: 235 EKLPKDVLEYVVFERYLVNPYGTWR 259
>gi|330976327|gb|EGH76384.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 281
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 66/221 (29%), Gaps = 36/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + + K G + +
Sbjct: 95 LFDILIMGLIA-FLIFR---------------FIARRRQQQQPKMAAAGASPYQRETSQP 138
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ I + +++ F+ + FL+ AR ++++ + ++ I +
Sbjct: 139 AQNPIFGSSSPAST-----APVINAPAWFNEQRFLDAARGHFQSLQQHWDANEMDKIAEF 193
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + T+ G ++ +
Sbjct: 194 VTPQMLQFLK---KERADLGDGFQSTYIENLQVQLDGVDDRADKTIATLTFSGVSKTSRF 250
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 251 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 279
>gi|104784399|ref|YP_610897.1| hypothetical protein PSEEN5505 [Pseudomonas entomophila L48]
gi|95113386|emb|CAK18114.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 281
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 68/228 (29%), Gaps = 37/228 (16%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M DF LL I F+ + F +
Sbjct: 89 FEGMQILDF--LLMGLIA-FLVFR--------------FIAARRRQQQPQHAAAGHAPYQ 131
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ + + I G V +++ F+ FL AR+ ++++ + +
Sbjct: 132 REAQPQAAPQPI-----FGGSAAPVASPVINAPAWFNEASFLAAARSHFQSLQQHWDANE 186
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ I + V ++ R + +S+ + D+++ + T+ G
Sbjct: 187 MDKIAEFVTPQMLDFLKR---ERAEEGEGFQSTYIDDLDVQLEGVDDRADKTIATLTFRG 243
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ +D + + W R + P W+L +
Sbjct: 244 VSKTSRFD-QGEV----------FNESWHMERAQGENQP-WLLAGIRQ 279
>gi|306832127|ref|ZP_07465281.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425566|gb|EFM28684.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 274
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 6/147 (4%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
K + I V+ DFD DF++ + Y + +++ + + L +++ N L
Sbjct: 106 EKAIEAIKLVHPDFDEYDFISYTKELYLELQNAWMDKDWERVRHLETESLFRQHNMQLQE 165
Query: 145 RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIF 203
N V +D I + + ++ + + + + D LI DP
Sbjct: 166 YIDNHTTNHLDRVCVDRAIIKSFKMSDDHDVVKVILSSYMCDYIRNDDTGELIQGDPTEH 225
Query: 204 GKVIDIWTF---VRNIPPSNP--NWVL 225
+ F ++ SNP +W L
Sbjct: 226 LYTVYNMEFIYEEDDVSDSNPYQHWKL 252
>gi|288906088|ref|YP_003431310.1| hypothetical protein GALLO_1899 [Streptococcus gallolyticus UCN34]
gi|288732814|emb|CBI14390.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
Length = 274
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 6/147 (4%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
K + I V+ DFD DF++ + Y + +++ + + L +++ N L
Sbjct: 106 EKAIEAIKLVHPDFDEYDFISYTKELYLELQNAWMDKDWERVRHLETESLFRQHNMQLQE 165
Query: 145 RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIF 203
N V +D I + + ++ + + + + D LI DP
Sbjct: 166 YIDNHTTNHLDRVCVDRAIIKSFKMSDDHDVVKVILSSYMCDYIRNDDTGELIQGDPTEH 225
Query: 204 GKVIDIWTF---VRNIPPSNP--NWVL 225
+ F ++ SNP +W L
Sbjct: 226 LYTVYNMEFIYEEDDVSDSNPYQHWKL 252
>gi|291530805|emb|CBK96390.1| Tim44-like domain [Eubacterium siraeum 70/3]
Length = 322
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 1/139 (0%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
R ++ I +F D + + Y I +++ + + + ++ +Y
Sbjct: 121 PNRTEQIEGIIKQKDPNFSASDLITFTKQVYIDIENAWCKRDMTPVRPVMHENLYNTTCK 180
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD-KDNLLISSD 199
+ + + ID + + + Y+T + + I D K +I D
Sbjct: 181 QVQAKIEQGVIYHYESIAIDTAYLTSYERDSQFEYVTAYLTSRMIDYQVDEKTGKIIRGD 240
Query: 200 PEIFGKVIDIWTFVRNIPP 218
FVR++
Sbjct: 241 KTTRWVQKYKMKFVRSLGV 259
>gi|146341888|ref|YP_001206936.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146194694|emb|CAL78719.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 324
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 9/127 (7%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V + L + F L ++ K + V + +
Sbjct: 200 EAFERLLGEIQSAWSNEDVGRLRLLSTPEMASYFERDLEQNQARGVVNKVTGVKLLQGDL 259
Query: 165 INASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
+ E Y T+ + + ++ ++ + +V +IWTF+R+ W
Sbjct: 260 AESWRENGADYATVAMRFTLADKTIERASGRVVEGS-DQPQEVTEIWTFLRHPGAD---W 315
Query: 224 VLISTKL 230
L + +
Sbjct: 316 QLSAIQQ 322
>gi|293603149|ref|ZP_06685582.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292818380|gb|EFF77428.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 252
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 20/220 (9%)
Query: 13 ILLFAFI-TF-FVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
+L+ A + F+ +LRG G +T + F+G + + R +
Sbjct: 44 LLIAAVVFAVMFIIRRLRGA-GPRTATQGAFNGANNAPGQQQQPMWREALKPTAAAAPAA 102
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + P + V DFD +FL +A+ + I + G + +
Sbjct: 103 AAAAAPVAPPAVLPKAGEDNNWFVPGDFDTPNFLKQAKEQFVRIQAVWDSGSTDGLRDFL 162
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ + L+ R + + L+ +++ + ++R G
Sbjct: 163 TDDLITELKPQLAERGAAPNKTEVVLLN---AEMLGIETVSDGHLASVRFSGMLR----- 214
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
S + ++W P+N W+L +
Sbjct: 215 ------ESPGAEAFRFEEVWNL---FKPANGGWLLAGIQQ 245
>gi|167844353|ref|ZP_02469861.1| Tim44-like domain protein [Burkholderia pseudomallei B7210]
Length = 258
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 40 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 95
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 96 QRQAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 155
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 156 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 212
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 213 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 255
>gi|91086739|ref|XP_971533.1| PREDICTED: similar to GA19976-PA [Tribolium castaneum]
gi|270009728|gb|EFA06176.1| hypothetical protein TcasGA2_TC009023 [Tribolium castaneum]
Length = 319
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 21/199 (10%)
Query: 38 EKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
EKPF +G YV + D + +G K+ + ++ +R I
Sbjct: 83 EKPFFISSTGGIFEPYVPPEGDGKISPIHMQGAKQKL-----QFLEKKSKTMMAIRKIRM 137
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
DFD F EA N Y + + + I V R Y + + ++ +
Sbjct: 138 FEEDFDTTAFCKEAENIYVKMHELMAKKDWDNITDYVTERAY---PEVIHNVENK--TIH 192
Query: 154 SSLV-GIDDMKIINAS------IEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
L+ I+ ++++A E T+R Q + A YD+ L+ I V
Sbjct: 193 WKLIKNIELPRVVHARCTDVITKENVFGQTTVRFHTQQMLAVYDRFGRLMHGSEIIAKDV 252
Query: 207 IDIWTFVRNIPPSNPNWVL 225
++ F +++ W +
Sbjct: 253 LEYIVFEKHLANVYGKWRI 271
>gi|126454670|ref|YP_001064966.1| Tim44-like domain-containing protein [Burkholderia pseudomallei
1106a]
gi|242315731|ref|ZP_04814747.1| Tim44 domain protein [Burkholderia pseudomallei 1106b]
gi|126228312|gb|ABN91852.1| Tim44 domain protein [Burkholderia pseudomallei 1106a]
gi|242138970|gb|EES25372.1| Tim44 domain protein [Burkholderia pseudomallei 1106b]
Length = 323
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 105 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 160
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 161 QRQAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 220
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 221 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 277
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 278 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 320
>gi|260829205|ref|XP_002609552.1| hypothetical protein BRAFLDRAFT_285685 [Branchiostoma floridae]
gi|229294914|gb|EEN65562.1| hypothetical protein BRAFLDRAFT_285685 [Branchiostoma floridae]
Length = 349
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 16/191 (8%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK 101
+ Y+ + D R + +G + +R I +F K
Sbjct: 86 TPEVMDPYIPPEGDGRQSVLSKEGAVQRLSS-----AKALATSQLSIRKIKEFDKEFSTK 140
Query: 102 DFLNEARNSYEAIVDS---FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS---- 154
F A+ Y+ + F H + +LV + Y D R +S
Sbjct: 141 TFAGTAQEIYKEANNCLANFNTRNRHRLHQLVTEKCYPDMVRGFKFRTIRWTFQESVEPP 200
Query: 155 SLVGIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+V + +I+ + N +T+R+ + A YD+ L D + V++ F
Sbjct: 201 KVVHVRHNDLIS---KGNVYGQVTVRMHTRQTLAIYDRFGRLEFGDENLVKDVLEYVVFE 257
Query: 214 RNIPPSNPNWV 224
R++ +W
Sbjct: 258 RHLVNPYSSWR 268
>gi|254197071|ref|ZP_04903495.1| Tim44-like domain protein [Burkholderia pseudomallei S13]
gi|169653814|gb|EDS86507.1| Tim44-like domain protein [Burkholderia pseudomallei S13]
Length = 339
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSG-----FFSGKYVFSKRDER 57
F M + +I L A ++ + + G ++P G +S+
Sbjct: 121 FAGMMANVIVIALLAMAGIWLVRKFMN----RRGAQQPAYAGGQPTLNRGHDGYSQDAGV 176
Query: 58 GIITLGKGKKKDNLDSINELFP---IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
G + + G +V FD + FL A+ + +
Sbjct: 177 QRQAAPGGAFPGSGSAYAGEAQRVFGGAGAATAAAAAPAVPAGFDTEAFLRNAKVYFVRL 236
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174
++ EG + I + ++ + L R + ++ +V + D +++
Sbjct: 237 QAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDVVQL-DAELLAVEDRGGEH 293
Query: 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
++R G + ++W + + W+L +
Sbjct: 294 LASVRFHG----LIRETQGAAAE-------PFDEVWNLSK---SGSQGWLLAGIQQA 336
>gi|329906020|ref|ZP_08274321.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480]
gi|327547352|gb|EGF32182.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480]
Length = 209
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 71/226 (31%), Gaps = 23/226 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGN-EKPFSGFFSGKYVFSKRDERGIITLGK 64
M S ++ L A FF+ + +KT + KP +G
Sbjct: 4 MISTLLMVGLLAAAAFFI----YRMFKRKTDDGSKPGYAGGYDAGSTDSSSRNYTPEIGS 59
Query: 65 GKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
+ + + P+ + + + DFD FL ++ + + ++ + ++
Sbjct: 60 RIEPVAQPAALQSVPLTSGAAAAPFGVPA---DFDVPGFLRNSKTYFIRLQAAWDKADIN 116
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQF 184
I + S ++ + + R + ++ V D +++ +++
Sbjct: 117 DIREFTSSEMFAELRLQIQER---GASPNNTDVVKLDAELLGVETVGGDYLASVKFS--- 170
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ S+ + W ++ W+L +
Sbjct: 171 --------GMIKESESAPAEPFAEAWNLSKS-TSGQGGWILAGIQQ 207
>gi|330964447|gb|EGH64707.1| Tim44-like domain-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 281
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 96 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAAAGAPYQRETSQPAQNPIFGSSSPAS 151
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
IN F+ + FL+ AR ++++ + ++ I +
Sbjct: 152 AAPVINAPA------------------WFNEERFLDAARGHFQSLQQHWDANEMDKIAEF 193
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + ++++ + T+ G ++ +
Sbjct: 194 VTPQMLQFLK---KERADLGDGFQSTYIENLNVQLDGVDDRADKTIATLTFSGVSKTSRF 250
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + P W++ +
Sbjct: 251 D-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 279
>gi|50949925|emb|CAH10507.1| hypothetical protein [Homo sapiens]
Length = 90
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 33/87 (37%)
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNL 194
Y + K+ S ++ ID++ + + E + I Q + +
Sbjct: 1 YSQLAHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGE 60
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSNP 221
++ DP+ +++ +W R+ NP
Sbjct: 61 VVEGDPDKVLRMLYVWALCRDQDELNP 87
>gi|329916047|ref|ZP_08276350.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480]
gi|327544779|gb|EGF30180.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480]
Length = 204
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/215 (10%), Positives = 61/215 (28%), Gaps = 25/215 (11%)
Query: 16 FAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
F ++ K S + F+ + G+ + D
Sbjct: 13 LLAAAGFFIYRM----------FKRKSEQGGTQPAFAGAAKTGLTPDIGSRIDPATDYRF 62
Query: 76 ELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135
G+ + V DFD F+ + + + ++ V+ I + ++
Sbjct: 63 GSNSAGSATGNSAQAPWGVPADFDTTGFVRHTKTYFVRLQAAWDSANVNDIREFTTPEMF 122
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLL 195
+ + R + + V D +++ + ++ +++ ++
Sbjct: 123 AELRLQIQER---GPSDSHTDVVQLDAELLGMELVDDDHLASVKFS-----------GMI 168
Query: 196 ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
SD ++W + WVL +
Sbjct: 169 KESDAAPAEPFTEVWNLSKP-RNGQGGWVLAGIQQ 202
>gi|157786676|ref|NP_001099304.1| 39S ribosomal protein L45, mitochondrial [Rattus norvegicus]
gi|149054036|gb|EDM05853.1| mitochondrial ribosomal protein L45 (predicted) [Rattus norvegicus]
Length = 306
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R I +F KDF +A++ + + LV + D +
Sbjct: 121 AIRKIKEFDANFKTKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMV-----WE 175
Query: 147 SNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQFISASYDKDNLLISSD 199
K V+ S V ++ ++++ +T+R+ + A YD+ L+
Sbjct: 176 LKYKTVRWSFVESLEPAQVVHVRSSGLVNQSNMYGQVTVRLHTRQTLAIYDRFGRLMYGQ 235
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
++ V++ F R++ +W + +
Sbjct: 236 EDVPKDVLEYVVFERHLMNPYGSWRMHA 263
>gi|312089990|ref|XP_003146448.1| hypothetical protein LOAG_10876 [Loa loa]
gi|307758388|gb|EFO17622.1| hypothetical protein LOAG_10876 [Loa loa]
Length = 403
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 132 SRVYQDFNDSLSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
S Y + ++ K S ++ ID ++++ + E+ I I ++ +
Sbjct: 295 SEAYNILSTIVNEYKKVNFNTADSRVIDIDRVEMVTGKMMEHGPVIIITFQAYMVNVVRN 354
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVLISTK 229
+ ++ DP+ +V +W R++ NP W ++
Sbjct: 355 MEGKVVEGDPKSPVRVHHVWVMCRDMEEYNPAVAWKVLEVH 395
>gi|241661967|ref|YP_002980327.1| import inner membrane translocase subunit Tim44 [Ralstonia
pickettii 12D]
gi|240863994|gb|ACS61655.1| import inner membrane translocase subunit Tim44 [Ralstonia
pickettii 12D]
Length = 339
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 70/243 (28%), Gaps = 40/243 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKT-------------GNEKPFSGFFSGKYVFSKRDERGI 59
++L A + F V +R V G + G+ +P+ + +
Sbjct: 110 LILIALVAFVVMWIIRKVRGSRPQGPAYATGGPSLGGDREPYVPQPAAPAPQASAPAAAS 169
Query: 60 ITLGKGKKKDNL------------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
+ G + + + V DFD + FL A
Sbjct: 170 LNTGNTSGLGAGAATAAQSWNLGGSAASAQAVNAQPAAAAPQQPWGVPADFDTQAFLRNA 229
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
+ + + ++ G ++ I + ++ + L+ R + + V + +++
Sbjct: 230 KVYFIRLQAAWDAGNLNDIREFTTPEMFAEIKMDLADR---GTSPNKTDVVSVEAEMLGI 286
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ ++R ++ ++W + + WVL
Sbjct: 287 ETQAAEYLASVRFS-----------GMIREEANAPAQPFAEVWNLTKPTQGAG-GWVLAG 334
Query: 228 TKL 230
+
Sbjct: 335 IQQ 337
>gi|325979053|ref|YP_004288769.1| hypothetical protein SGGBAA2069_c18530 [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325178981|emb|CBZ49025.1| hypothetical protein SGGBAA2069_c18530 [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 274
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 6/147 (4%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
K + I V+ DFD DF++ + Y + +++ + + L +++ N L
Sbjct: 106 EKAIEAIKLVHPDFDEYDFISYTKELYLELQNAWMDKDWERVRHLETESLFRQHNMQLQE 165
Query: 145 RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEIF 203
N V +D I + + ++ + + + + D LI DP
Sbjct: 166 YIDNHTTNHLDRVCVDQAIIKSFKMSDDHDVVKVILSSYMCDYIRNDDTGELIQGDPTEH 225
Query: 204 GKVIDIWTF---VRNIPPSNP--NWVL 225
+ F ++ SNP +W L
Sbjct: 226 LYTVYNMEFIYEEDDVSDSNPYQHWKL 252
>gi|299769068|ref|YP_003731094.1| hypothetical protein AOLE_04120 [Acinetobacter sp. DR1]
gi|298699156|gb|ADI89721.1| hypothetical protein AOLE_04120 [Acinetobacter sp. DR1]
Length = 330
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 56/194 (28%), Gaps = 18/194 (9%)
Query: 40 PFSGFFSGKYVFSKRDERGIITLGKGKKKDNL-DSINELFPIGTRLNKVMRDIVSVYTDF 98
P++ G+ F + G + S+ + D
Sbjct: 153 PYAPNNDGQNPFGRSAAPQATPRNAGDNTNIFGQSVGGGAATQAPFGGATTSNGNQLPDG 212
Query: 99 D-PKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
P FL AR + I + I + + +Y + + + + +
Sbjct: 213 SEPAAFLRIARQRFNHIQSMNTASNIEEIRRYLTPELYSSMYNDIMENQDQDV---AEFS 269
Query: 158 GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP 217
++ M + +A+ E +++R + + +IW FV+
Sbjct: 270 NLNAMVVDSAT-ENGQYVVSVRF-----------TGTVSEDLNSLPQPFTEIWHFVKPAG 317
Query: 218 PSNPNWVLISTKLG 231
+WV+ +
Sbjct: 318 SQQ-DWVVAGIQQA 330
>gi|89900086|ref|YP_522557.1| import inner membrane translocase subunit Tim44 [Rhodoferax
ferrireducens T118]
gi|89344823|gb|ABD69026.1| import inner membrane translocase, subunit Tim44 [Rhodoferax
ferrireducens T118]
Length = 318
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 78/245 (31%), Gaps = 34/245 (13%)
Query: 6 MDSGDFLILLFAFITFFV------FLQLRGVLG-KKTGNEKPFS------GFFSGKYVFS 52
M IL+FA + + F + R G + K + + S
Sbjct: 86 MGGAFGQILMFALLAMVIMMAVAWFKRSRS--GAQSQDTAKSPFAFQGAAPATAAQLPAS 143
Query: 53 KRDERGIITLGKGKKKDNLDSINE----LFPIGTRLNKVMRDIVS--VYTDFDPKDFLNE 106
R E + N + G+ + + S V FD + FL
Sbjct: 144 YRPENVGNDASARPWERNSTAFEALKTTPAVAGSMIGSGLAGSQSWGVPDGFDAEGFLTS 203
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN-EKNVKSSLVGIDDMKII 165
A+ ++ ++ ++ + ++A+ ++ + ++ L+ R+++ V + V + + +++
Sbjct: 204 AKANFVSLQAAWDKSDINALRVMMTDTMLKEIQAQLAEREAHTGGPVNLTDVVMIEAQLL 263
Query: 166 NASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ ++ ++ ++W + W++
Sbjct: 264 GIEDTGDDYMASVEFS-----------GMIREEPSAGASPFREVWNMTK-TKSGKSGWLV 311
Query: 226 ISTKL 230
+
Sbjct: 312 AGVQA 316
>gi|171321552|ref|ZP_02910488.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria MEX-5]
gi|171093167|gb|EDT38379.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria MEX-5]
Length = 344
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 71/237 (29%), Gaps = 29/237 (12%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L A I +R + ++ E +S S
Sbjct: 124 FASMMANVIVIALLAMIG---IWLVRKFMNRRRSQEPAYSVGGSASSSGGYSQSPSFQQG 180
Query: 63 GKGKKKDNLDSINELFPIG---------TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
G S G + + V FD + FL A+ +
Sbjct: 181 STGNTYAGSGSSYANEAQGVFGGGAAAAGAAGAMAAAPLQVPAGFDTEAFLRSAKVYFVR 240
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ ++ +G + I + ++ + L +R ++ +V + D +++
Sbjct: 241 LQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNDANQTDVVQL-DAELVAIEDRGIE 297
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + + ++W + + W+L +
Sbjct: 298 QSASVRFHG-LIRESANAPAAPLD----------EVWNLSK---SGSQGWLLAGIQQ 340
>gi|187927437|ref|YP_001897924.1| import inner membrane translocase subunit Tim44 [Ralstonia
pickettii 12J]
gi|309779861|ref|ZP_07674616.1| Tim44 domain protein [Ralstonia sp. 5_7_47FAA]
gi|187724327|gb|ACD25492.1| import inner membrane translocase subunit Tim44 [Ralstonia
pickettii 12J]
gi|308921438|gb|EFP67080.1| Tim44 domain protein [Ralstonia sp. 5_7_47FAA]
Length = 339
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 70/243 (28%), Gaps = 40/243 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKT-------------GNEKPFSGFFSGKYVFSKRDERGI 59
++L A + F V +R V G + G+ +P+ + +
Sbjct: 110 LILIALVAFVVMWIIRKVRGSRPQGPAYATGGPSLGGDREPYVPQPAAPAPQASAPAAAS 169
Query: 60 ITLGKGKKKDNL------------DSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
+ G + + + V DFD + FL A
Sbjct: 170 LNTGNTSGLGAGAATAAQSWNLGGSAASAQAVNAQPAAAAPQQPWGVPADFDTQAFLRNA 229
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
+ + + ++ G ++ I + ++ + L+ R + + V + +++
Sbjct: 230 KVYFIRLQAAWDAGNLNDIREFTTPEMFAEIKMDLADR---GTSPNKTDVVSVEAEMLGI 286
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ ++R ++ ++W + + WVL
Sbjct: 287 ETQAAEYLASVRFS-----------GMIREEANAPAQPFAEVWNLTKPTQGAG-GWVLAG 334
Query: 228 TKL 230
+
Sbjct: 335 IQQ 337
>gi|70733447|ref|YP_263222.1| hypothetical protein PFL_6164 [Pseudomonas fluorescens Pf-5]
gi|68347746|gb|AAY95352.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 291
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 37/223 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEK--PFSGFFSGKYVFSKRDERGIITLGKGKK 67
F IL+ A I FV + ++ E+ P + F + G G
Sbjct: 102 IFDILIMAVIA-FVIFRFIAAR-RRKQQEQYAPAGHAPMQREAFEPQQPAGGSIFGGSPA 159
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
IN F+ + F+ AR+ ++++ + ++ I
Sbjct: 160 PAARPVINAPA------------------WFNEERFIEAARSHFQSLQQHWDANEMDKIA 201
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ V ++ Q R +S+ + +++ + T+ G ++
Sbjct: 202 EFVTPQMLQFLKQ---ERADLGDGFQSTYIDNLQVQLEGVDDRADKTIATLTFSGVSKTS 258
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D + S W R + P W++ +
Sbjct: 259 RFD-QGEVFSES----------WNMERAQGDNQP-WLVAGIRQ 289
>gi|312963949|ref|ZP_07778420.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
fluorescens WH6]
gi|311281984|gb|EFQ60594.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
fluorescens WH6]
Length = 289
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 70/221 (31%), Gaps = 34/221 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ A I F+ + F K + ++K
Sbjct: 101 IFDILIMAVIA-FLVFR--------------FIAARRRKQQEHLAPAGAPMQREAFEQKP 145
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ SI G+ R +++ F+ + F+ AR+ ++++ + ++ I +
Sbjct: 146 AMGSIFG----GSAAPAAARPVINAPAWFNEERFVEAARSHFQSLQQHWDANEMDKISEF 201
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ + R +S+ + +++ + T+ G ++ +
Sbjct: 202 VTPQLLEFLKR---ERADLGDGFQSTYIDDLRVQLDGVDDRADKTIATLTFSGVSKTSRF 258
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D+ + W R + W++ +
Sbjct: 259 DQGEA-----------FSESWNMERAQG-DDQPWLVAGIRQ 287
>gi|78067527|ref|YP_370296.1| putative transporter [Burkholderia sp. 383]
gi|77968272|gb|ABB09652.1| putative transporter [Burkholderia sp. 383]
Length = 344
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 70/232 (30%), Gaps = 26/232 (11%)
Query: 8 SGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKK 67
S +++ A + +R + ++ E +S S G G
Sbjct: 126 SMMANVIVIALLAAVGIWLIRKFMNRRRPQEPAYSVGGSASSSGGYSQSPSFQQGGTGSN 185
Query: 68 KDNLDSINELFPIG---------TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
S G + V FD + FL ++ + + ++
Sbjct: 186 YAGSGSSYANEAQGVFGGGAAATGAAAAAAAAPLQVPAGFDTEAFLRSSKVYFVRLQAAW 245
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+G + I + ++ + L +R ++ ++ +V + D +++ ++
Sbjct: 246 DQGNLADIREFTTPEMFAEIKIDLDSR--GNESNQTDVVQL-DAELVAIEDRGIEQSASV 302
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
R G I S + ++W + + W+L +
Sbjct: 303 RFHG-LIRESANASAAPFD----------EVWNLSK---SGSQGWLLAGIQQ 340
>gi|148235359|ref|NP_001079503.1| 39S ribosomal protein L45, mitochondrial precursor [Xenopus laevis]
gi|29611839|sp|P59480|RM45_XENLA RecName: Full=39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|27696384|gb|AAH43883.1| Mrlp45 protein [Xenopus laevis]
Length = 309
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 65/194 (33%), Gaps = 14/194 (7%)
Query: 38 EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTD 97
E+P + + + G L K+ L + +R + ++
Sbjct: 73 ERPINIACTAGILDPYVPPEGDARLSSLSKEG-LKQRTQQLKQTAASQLAIRKVKEYDSE 131
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
F K F +A+ + H + LV R Y + R + + ++ S V
Sbjct: 132 FTTKTFPEKAQEIFITAHKYLTNFDRHKLHTLVTERCYPEMV-----RGNRYRTIRWSFV 186
Query: 158 -GIDDMKIINAS-----IEENT-VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
I+ +++ + N +T+R+ + YD+ ++ E V++
Sbjct: 187 ESIEAPRVVQVRCPEMVSKGNLYAQVTVRMHNKQTLIVYDRFGRVMCGS-EEPRDVLEYV 245
Query: 211 TFVRNIPPSNPNWV 224
F R++ W
Sbjct: 246 VFERHMVNPYGTWR 259
>gi|217322864|ref|YP_002324754.1| hypothetical protein ABBFA_000841 [Acinetobacter baumannii
AB307-0294]
gi|213985735|gb|ACJ56034.1| hypothetical protein ABBFA_000841 [Acinetobacter baumannii
AB307-0294]
Length = 190
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 28/196 (14%)
Query: 36 GNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVY 95
G + PF + + G G + S G +L
Sbjct: 23 GGQNPFGRSAAPTNTGDNTNIFGQSVGGGAATQAPFGSATTNS--GNQLPDGSE------ 74
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
P FL AR + I + I + + +Y + + + + +
Sbjct: 75 ----PASFLRVARQRFNHIQSINSASNIEEIRRYLTPELYNSMYNDIMENQDQDV---AE 127
Query: 156 LVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRN 215
++ M + +A+ E +++R + + +IW FV+
Sbjct: 128 FSNLNAMVVDSAT-ENGQYIVSVRF-----------TGTVSEDLNSLPQPFTEIWHFVKP 175
Query: 216 IPPSNPNWVLISTKLG 231
+ +WV+ +
Sbjct: 176 VGSQQ-DWVVAGIQQA 190
>gi|154291697|ref|XP_001546429.1| hypothetical protein BC1G_15139 [Botryotinia fuckeliana B05.10]
gi|150846639|gb|EDN21832.1| hypothetical protein BC1G_15139 [Botryotinia fuckeliana B05.10]
Length = 166
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 12/134 (8%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI---DDMK 163
A Y + +F G + + ++ + + F +++R + V +LV + +
Sbjct: 23 AEALYREMYQNFAAGDIGRLRRMCADGLLESFAQRIASR-PRGQKVTWNLVKMNRRPKIM 81
Query: 164 IINASIEEN-----TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP 218
A + +RI + D + E V++ +
Sbjct: 82 STKAVMIPGGDGNVIRQAVVRISSRQKMTLRDNKGKELPGSTE--KDVVEYVVVQKIYRN 139
Query: 219 -SNPNWVLISTKLG 231
+P W + T G
Sbjct: 140 WQDPEWQVWGTTRG 153
>gi|323529253|ref|YP_004231405.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1001]
gi|323386255|gb|ADX58345.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
CCGE1001]
Length = 322
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 67/229 (29%), Gaps = 26/229 (11%)
Query: 4 IKMDSGD--FLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIIT 61
+M S +++ A + F F+ +P + G S+ + +
Sbjct: 115 TQMLSNLLLIGLVVMAGVMLFRFI---------ANRRRPDLAYGHGAANRSQGNGSPFLN 165
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
+ D+ + D + + A++ + + ++
Sbjct: 166 QTGHARSDSHFFGTQRAATNPAGAAGAFSAPVQPLGVDQAELVVSAKSLFMRLQAAWDRN 225
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+ + +L ++ L R S + V + +++ + ++++R
Sbjct: 226 EQGDLFELTTPEMFAQLKRDLEDRGSQPNRTE---VPQLEAEVLGVQSTADETFVSVRFY 282
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
GQ D ++W VR+ + W L +
Sbjct: 283 GQMR-----------EDDAPTAQPFQEVWNMVRSARGGDA-WRLAGIQQ 319
>gi|330818295|ref|YP_004362000.1| hypothetical protein bgla_1g34410 [Burkholderia gladioli BSR3]
gi|327370688|gb|AEA62044.1| hypothetical protein bgla_1g34410 [Burkholderia gladioli BSR3]
Length = 353
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 74/250 (29%), Gaps = 45/250 (18%)
Query: 3 FIKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITL 62
F M + +I L AFI ++ +L N KP + RG
Sbjct: 123 FASMMANVIVIALLAFIGIWIVRKLMN------RNRKPEPAYAGAGSSPGSSMNRGGYDA 176
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMR----------------------DIVSVYTDFDP 100
G + + P + SV FD
Sbjct: 177 GSNGGYASQNQAYAPAPSQPASSSSYANEAAGVFGGAAAAGAGLAAAGTAPSSVPAGFDS 236
Query: 101 KDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGID 160
+ F+ A+ + + ++ EG + I + ++ + L++R + ++ +V +
Sbjct: 237 EAFVRNAKVYFIRLQAAWDEGNMTDIREFTTPEMFAEVKVDLASRGA--DKNQTDVVQL- 293
Query: 161 DMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN 220
+ +++ N ++R L+ + ++W N
Sbjct: 294 EAELLGVEERGNQYEASVRF-----------HGLIREAPGASAEPFEEVWNL---TKAGN 339
Query: 221 PNWVLISTKL 230
W+L +
Sbjct: 340 EGWLLAGIQQ 349
>gi|255320354|ref|ZP_05361538.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|255302549|gb|EET81782.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
Length = 333
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 66/232 (28%), Gaps = 41/232 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEK--------------PFSGFFSGKYVFSKRDERG 58
+LL A + FFVF +K G +K P F + +
Sbjct: 128 VLLAAAVAFFVF--------RKFGAKKKLATNNPYAPNSAGPNPSPFGQHNAAPRTQDNT 179
Query: 59 IITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
I + P GT + + +P FL AR + I
Sbjct: 180 NIFGQSVGGSSTAANTANNAPFGTAYTNSGQQLPD---GTEPAAFLRIARQRFNHIQSMN 236
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+ I + + +Y + + + + ++ ++++ E +++
Sbjct: 237 TASNIEEIRRYLTPELYNAMRSDIMANQDQDV---AEFSNLN-AMVVDSVTENGQYVVSV 292
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
R + + + W FV+ +WV+ +
Sbjct: 293 RF-----------TGTVSEDLNSLPQPFSETWHFVKPAGSQQ-DWVVAGIQQ 332
>gi|264676930|ref|YP_003276836.1| import inner membrane translocase, subunit [Comamonas testosteroni
CNB-2]
gi|262207442|gb|ACY31540.1| import inner membrane translocase, subunit [Comamonas testosteroni
CNB-2]
Length = 333
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/197 (11%), Positives = 61/197 (30%), Gaps = 21/197 (10%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLD--SINELFPI--GTRLNKVMR--DIVSVY 95
+G G + + +G + I E G+ + + V
Sbjct: 148 AGNLGGDVNAPQARQYNPEKVGNDASARPWEQNHIPEAAAAAGGSMIGSALSGSQNWGVP 207
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS--NEKNVK 153
DFD + FL A+ ++ + ++ + + ++ + + LS R+S +
Sbjct: 208 ADFDAEGFLTAAKRNFVTLQSAWDRSDITTLRSMMTDEMLAEIRSQLSERESQRAGEPNH 267
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ ++ I D +++ N ++ ++ ++W
Sbjct: 268 TDVLMI-DAQLLGIEDLGNGYMASVEFS-----------GMIREEASAGPSPFREVWNMT 315
Query: 214 RNIPPSNPNWVLISTKL 230
+ W++ +
Sbjct: 316 KP-KSGTSGWLVAGVQA 331
>gi|75676350|ref|YP_318771.1| hypothetical protein Nwi_2165 [Nitrobacter winogradskyi Nb-255]
gi|74421220|gb|ABA05419.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 312
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I ++ + V+ + L + F + L + S V + + A E T
Sbjct: 198 IQAAWSKEDVNTLHTLATPEMVSYFTEDLRANDARGVVNTVSDVKLLQGDLAEAWREGVT 257
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ + I + ++ ++ + + +IWTF R W L + +
Sbjct: 258 DYATVALRYSLIDKTTERASGRIVDG-GDQPQEAAEIWTFARRDGGK---WELSAIQQ 311
>gi|262379363|ref|ZP_06072519.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262298820|gb|EEY86733.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 325
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 66/232 (28%), Gaps = 41/232 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEK--------------PFSGFFSGKYVFSKRDERG 58
+LL A + FFVF +K G +K P F + +
Sbjct: 120 VLLAAAVAFFVF--------RKFGAKKKLATNNPYAPNSAGPNPSPFGQHNAAPRTQDNT 171
Query: 59 IITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSF 118
I + P GT + + +P FL AR + I
Sbjct: 172 NIFGQSVGGSSTAANTANNAPFGTAYTNSGQQLPD---GTEPAAFLRIARQRFNHIQSMN 228
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+ I + + +Y + + + + ++ ++++ E +++
Sbjct: 229 TASNIEEIRRYLTPELYNAMRSDIMANQDQDV---AEFSNLN-AMVVDSVTENGQYVVSV 284
Query: 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
R + + + W FV+ +WV+ +
Sbjct: 285 RF-----------TGTVSEDLNSLPQPFSETWHFVKPAGSQQ-DWVVAGIQQ 324
>gi|157131210|ref|XP_001655824.1| mitochondrial ribosomal protein, L45, putative [Aedes aegypti]
gi|108871608|gb|EAT35833.1| mitochondrial ribosomal protein, L45, putative [Aedes aegypti]
Length = 334
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 21/209 (10%)
Query: 28 RGVLGKKTGNEKPFSGFFSG----KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTR 83
RG+L + E+PF +G YV + D + +G K+ EL T+
Sbjct: 84 RGILPPRPWMERPFYISCTGGVFEPYVPPEGDGKMSAVSKEGAKQK-----FELLEKKTK 138
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R I S DF+P +F +A+ Y + E + + +++ R Y + +++
Sbjct: 139 SMMAVRKIRSFDDDFEPPEFAAQAQEIYIQAHNLLMEKNKYKLREIITERAYPEMMHNVT 198
Query: 144 TRKSNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLI 196
K ++ + + + + ++N +T+R Q I A YD+ L+
Sbjct: 199 D-----KTIRWKFLKSLEPPRVVHARCTDVISKDNIFGQVTVRFHTQQILAIYDRFGRLM 253
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ ++ F +++ W L
Sbjct: 254 HGSEIVEKDCLEYVVFEKHLSNEYGVWRL 282
>gi|299531492|ref|ZP_07044898.1| import inner membrane translocase, subunit [Comamonas testosteroni
S44]
gi|298720455|gb|EFI61406.1| import inner membrane translocase, subunit [Comamonas testosteroni
S44]
Length = 325
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/197 (11%), Positives = 61/197 (30%), Gaps = 21/197 (10%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLD--SINELFPI--GTRLNKVMR--DIVSVY 95
+G G + + +G + I E G+ + + V
Sbjct: 140 AGNLGGDVNAPQARQYNPEKVGNDASARPWEQNHIPEAAAAAGGSMIGSALSGSQNWGVP 199
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS--NEKNVK 153
DFD + FL A+ ++ + ++ + + ++ + + LS R+S +
Sbjct: 200 ADFDAEGFLTAAKRNFVTLQSAWDRSDITTLRSMMTDEMLAEIRSQLSERESQRAGEPNH 259
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ ++ I D +++ N ++ ++ ++W
Sbjct: 260 TDVLMI-DAQLLGIEDLGNGYMASVEFS-----------GMIREEASAGPSPFREVWNMT 307
Query: 214 RNIPPSNPNWVLISTKL 230
+ W++ +
Sbjct: 308 KP-KSGTSGWLVAGVQA 323
>gi|17545178|ref|NP_518580.1| hypothetical protein RSc0459 [Ralstonia solanacearum GMI1000]
gi|17427469|emb|CAD13987.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 356
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 43/134 (32%), Gaps = 15/134 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DFD + FL A+ + + ++ G ++ I + ++ + L+ R +
Sbjct: 236 DFDTQAFLRNAKVYFVRLQAAWDAGNLNDIREFTTPEMFAEIKMDLTDR---GTVPNKTD 292
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + +++ ++R ++ ++W +
Sbjct: 293 VVSVEAELLGIETHPTEYLASVRFS-----------GMIREETSAPAQPFAEVWNLTKPT 341
Query: 217 PPSNPNWVLISTKL 230
S WVL +
Sbjct: 342 QGSG-GWVLAGIQQ 354
>gi|154247196|ref|YP_001418154.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
gi|154161281|gb|ABS68497.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
Length = 325
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 15/135 (11%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
+++E I + + ++ D L + S V + +
Sbjct: 194 DAFERLLGIIQGAVSREDQAELRANTTPEMFGYLADELRENAERGLRNQVSDVKLLQGDV 253
Query: 165 INASIEENTVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN 222
A E N Y T+ R + + ++S G+ ++WTFVR+ + P
Sbjct: 254 AEAWREGNREYATVAMRYASRDVMLDR-ASGKVVSGAA-GIGESTEVWTFVRD-RIAGPT 310
Query: 223 ------WVLISTKLG 231
W L + +
Sbjct: 311 GGAAGLWRLSAIQGA 325
>gi|187922657|ref|YP_001894299.1| import inner membrane translocase subunit Tim44 [Burkholderia
phytofirmans PsJN]
gi|187713851|gb|ACD15075.1| import inner membrane translocase subunit Tim44 [Burkholderia
phytofirmans PsJN]
Length = 330
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 62/193 (32%), Gaps = 23/193 (11%)
Query: 46 SGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK--------VMRDIVSVYTD 97
+ +L G + + P G+ L + + V
Sbjct: 149 RKRDSAQPAYAGSSPSLNSGGTGYSQEPRYSAPPTGSYLEQQGNPLNTPTINAAPVVPAG 208
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
FD + FL A+ + + ++ G I + ++ + LS+R + + ++ +V
Sbjct: 209 FDSEAFLRNAKVYFVRLQAAWDVGNTEDIREFTTPEMFAEVKVDLSSRGA--ETNQTDVV 266
Query: 158 GIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP 217
++ +++ N + ++R L+ + +++W +
Sbjct: 267 QLN-AELLGVEERANEYFASVRFS-----------GLIREAPGAAAEPFVEVWNLSK-AN 313
Query: 218 PSNPNWVLISTKL 230
W+L +
Sbjct: 314 RPGEGWLLAGIQQ 326
>gi|260220358|emb|CBA27818.1| hypothetical protein Csp_A04170 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 319
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 74/231 (32%), Gaps = 31/231 (13%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNE--KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
LL + + + +R +K + PF+ +G + +G
Sbjct: 104 LLALGVMMLIGMFMRS---RKPAAQAASPFAFQGAGPAPVQDLKQYRAENVGNDASARPW 160
Query: 72 DSINELFPIGTRLNKVMRDIVSV---------YTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ + +F + I S FD + FL A+ ++ + ++
Sbjct: 161 ERSSMVFEAPQPAAQGGSMIGSALMGSQTWGVPAGFDTEGFLKSAKANFVTLQAAWDRSD 220
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSN-EKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
V A+ ++ + ++ L+ R+++ V + V + D +++ + ++
Sbjct: 221 VAALRAMMTDDMTREIQTQLAERETHTGAGVNHTDVVMIDARLLGIEELPDEYMASVEFS 280
Query: 182 GQFISASYDKDNLLISSDPEIFGKVIDIW--TFVRNIPPSNPNWVLISTKL 230
++ ++W T +N W++ +
Sbjct: 281 -----------GMIREEPSAGPSPFREVWNMTKAKNGSSG---WLVAGVQA 317
>gi|209880173|ref|XP_002141526.1| Tim44-like domain-containing protein [Cryptosporidium muris RN66]
gi|209557132|gb|EEA07177.1| Tim44-like domain-containing protein [Cryptosporidium muris RN66]
Length = 452
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNS-YEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T ++++ V F+ +F+ I+D++ G + Y +
Sbjct: 279 TEFALAIKEMRKVDPTFNTVEFIETVETVIIPHIIDAYLVGNDDVLRLHCGITAYAALSA 338
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINA------SIEENTVY-------ITIRIVGQFISA 187
S R+S + + +L+ I ++ + A S + N Q I+
Sbjct: 339 SCKERRSMKLKLDPTLLLIRNVDLKGAKRWNVNSNDSNEYNNFNSYPWFIFTFSTQQINC 398
Query: 188 SYDKDNLLISSDPEIFGKV 206
D + ++S + +V
Sbjct: 399 LRDYEGKVVSGSVDDIREV 417
>gi|311103718|ref|YP_003976571.1| Tim44-like domain-containing protein [Achromobacter xylosoxidans
A8]
gi|310758407|gb|ADP13856.1| Tim44-like domain protein [Achromobacter xylosoxidans A8]
Length = 334
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 72/220 (32%), Gaps = 20/220 (9%)
Query: 13 ILLFAFI-TF-FVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDN 70
+L+ A + F+ +LRG G +T + F+G + + R +
Sbjct: 126 LLIAAVVFAVMFIIRRLRGA-GPRTATQGAFNGSNNTPGQQQQPMWRESLKPAAPAAAAA 184
Query: 71 LDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+ + + V DFD +FL +A++ + I + G + + +
Sbjct: 185 VAAPVAAAAPAAMPKAGDDNNWFVPGDFDTPNFLKQAKDQFVRIQAVWDSGSTDGLREFL 244
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ + L+ R + + L+ +++ + ++R G
Sbjct: 245 TDDLITELKPQLAERGAAPNKTEVVLLN---AEMLGIETVSDGHLASVRFSGMLR----- 296
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + ++W P+N W+L +
Sbjct: 297 ------EAPGAEAFRFEEVWNL---FKPANGGWLLAGIQQ 327
>gi|296476478|gb|DAA18593.1| 39S ribosomal protein L45, mitochondrial precursor [Bos taurus]
Length = 306
Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 122 IRRIKESDPNFKVKDFPEKAQDIFIEAHLCLNNSDHDRLHTLVTENCFPDMVWDIK---- 177
Query: 148 NEKNVKSSLV-GIDDMKIINAS----IEENTV--YITIRIVGQFISASYDKDNLLISSDP 200
K V+ S V ++ +++ + ++ +T+R+ + A YD+ L+
Sbjct: 178 -YKTVRWSFVESLEPPQVVQVRCSSLVTKSNAYGQVTVRMHTRQTLAIYDRFGRLMYGQE 236
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 237 DVPRDVLEYVVFEKHLANPYGSWR 260
>gi|310821532|ref|YP_003953890.1| hypothetical protein STAUR_4283 [Stigmatella aurantiaca DW4/3-1]
gi|309394604|gb|ADO72063.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 637
Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
+ + ++ + F+ + L + R+ + + +++F+ ++ + + YQ FN
Sbjct: 114 DQSVQEWVQALKRKDPQFEVQGVLAKVRHLFPLLQEAWFKRELTPVRPFLSDATYQRFNV 173
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFIS----ASYDKDNLLI 196
L + + + D +II S E + IRI + A L
Sbjct: 174 QLQLMAAQGVRDAICDIRLLDARIIGLSQSEWFDSLQIRIQAEMRDTDVPADASDAQALA 233
Query: 197 SSDPEIFGKVIDIWTFVRNIPPS 219
++ ++WTFVR +
Sbjct: 234 AAQRAPLESFTEVWTFVRKPGAT 256
>gi|302686218|ref|XP_003032789.1| hypothetical protein SCHCODRAFT_54972 [Schizophyllum commune H4-8]
gi|300106483|gb|EFI97886.1| hypothetical protein SCHCODRAFT_54972 [Schizophyllum commune H4-8]
Length = 485
Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 10/172 (5%)
Query: 38 EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTD 97
E P F E +++ + E T +V+R + ++
Sbjct: 260 ENPVLRSFVSMRQAYDESENPVVSTMRSVTSTIGSWFEE-----TEQAQVLRMMKAIDPT 314
Query: 98 FDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
FD + F E R Y +VD++ A++ Y ++ +S
Sbjct: 315 FDREQFERELRE-YIVPEVVDAYLSADQKALKDWCSEATYNVLWATMEHYLKQGLVSESK 373
Query: 156 LVGIDDMKIINASIEENTVYI-TIRIVGQFISASYD-KDNLLISSDPEIFGK 205
++ I + I + I +N + + ++ Q + + K + + +
Sbjct: 374 VLDIRQVDISDGKILDNDIPVYLVQFATQEVLLFRNIKTGEVAVGAEDKVEQ 425
>gi|237801765|ref|ZP_04590226.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806703|ref|ZP_04593407.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024624|gb|EGI04680.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027817|gb|EGI07872.1| Tim44-like domain-contain protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 280
Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 37/221 (16%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + ++ ++P Y G
Sbjct: 95 LFDILIMGLIA-FLIFRFIA---RRRQQQQPKMAPAGAPYQRETSQPTQNPIFGSSSPAS 150
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+IN F+ + FL AR ++++ + ++ I +
Sbjct: 151 APPAINAPA------------------WFNEERFLEAARGHFQSLQQHWDANEMDKIAEF 192
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + ++++ + T+ G ++ +
Sbjct: 193 VTPQMLQFLK---KERADLGDGFQSTYIENLNVQLDGVDDRADKTIATLTFSGVSKTSRF 249
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D + S W R + N W++ +
Sbjct: 250 D-QGEVFSES----------WNMER-LQGDNQPWLVAGIRQ 278
>gi|303256401|ref|ZP_07342415.1| Tim44 domain protein [Burkholderiales bacterium 1_1_47]
gi|302859892|gb|EFL82969.1| Tim44 domain protein [Burkholderiales bacterium 1_1_47]
Length = 327
Score = 55.3 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 59/190 (31%), Gaps = 24/190 (12%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK 101
+ F + + R++ + +D ++ + DF+ +
Sbjct: 162 ADFGQSRSEAAVREQPAFNPAQAVRPGSAMDQFSDEPAAASESTYG------APADFNQE 215
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
+FLN + ++ + ++ G + + ++ + R+ N+ + +V ++
Sbjct: 216 EFLNMSTAYFKMLQKAWDSGDMDDLANYTTDDLFIELTH--KRREIKGVNL-TEIVNLN- 271
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
+ ++ G ++ ++ +IW V+
Sbjct: 272 ASLAGFETTPTEYVASVLFTGSL-----KENGEP--------TEIKEIWNLVKP-KEGKT 317
Query: 222 NWVLISTKLG 231
W+L +
Sbjct: 318 GWLLAGIQQA 327
>gi|171059204|ref|YP_001791553.1| import inner membrane translocase subunit Tim44 [Leptothrix
cholodnii SP-6]
gi|170776649|gb|ACB34788.1| import inner membrane translocase subunit Tim44 [Leptothrix
cholodnii SP-6]
Length = 333
Score = 54.9 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 59/186 (31%), Gaps = 19/186 (10%)
Query: 47 GKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNE 106
+ + G G+ ++ + P + ++ DFD F
Sbjct: 163 PAAMQRSNAQEGSAAASFGQAGNSAGFNSASAPAFEPIGAAPTAAANLPADFDQAGFERI 222
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
A+ + + + G ++ + ++ L R + + V ++++
Sbjct: 223 AKMIFIRMQAANDSGDLNDLRSFTTPEMFAHIRLELQERGNAPQTTDVVDVA---AEVLD 279
Query: 167 ASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV--RNIPPSNPNWV 224
+ + + +++R GQ + ++S +IW V R+ NW
Sbjct: 280 LTRDTDRDIVSVRYHGQI----REAAGAPVTS-------FDEIWHLVQPRD-GSR--NWA 325
Query: 225 LISTKL 230
+ +
Sbjct: 326 ISGIQQ 331
>gi|218672995|ref|ZP_03522664.1| putative transmembrane TIM family protein [Rhizobium etli GR56]
Length = 113
Score = 54.9 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 6/113 (5%)
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI--R 179
+ +L + L +N + S V + I A E+ Y T+ R
Sbjct: 1 DYGTLRRLTTPEAMSYLAEELGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMR 60
Query: 180 IVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
D ++S D + ++WTFVR W L + + E
Sbjct: 61 YSSIDAMVERDS-GRVVSGDDRQPSESTEVWTFVRKSGAD---WKLAAIQGTE 109
>gi|255542538|ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548293|gb|EEF49784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 619
Score = 54.9 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 9/120 (7%)
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
+ + EA Y+ I G +++ K V ++Y + + + R+S
Sbjct: 153 KLRKSGYSKHQLYKEAIELYKEISTMIANGDKNSLRKAVTEKMYSELKNEIKQRESMWSK 212
Query: 152 VKSSLVG-IDDMKIINASIEENTV--------YITIRIVGQFISASYDKDNLLISSDPEI 202
V LV + ++ + A + +T+ ++ + +YD + +++ D
Sbjct: 213 VYWELVEPVIKIRTLRARLIGVDRSDFSKVFIQLTLELLTKQKFEAYDSKDTVVAGDKTK 272
>gi|331001471|ref|ZP_08325089.1| Tim44-like domain protein [Parasutterella excrementihominis YIT
11859]
gi|329568200|gb|EGG50017.1| Tim44-like domain protein [Parasutterella excrementihominis YIT
11859]
Length = 310
Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 59/190 (31%), Gaps = 24/190 (12%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK 101
+ F + + R++ + +D ++ + DF+ +
Sbjct: 145 ADFGQSRSEAAVREQPAFNPAQAVRPGSAMDQFSDEPAAASESTYG------APADFNQE 198
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
+FLN + ++ + ++ G + + ++ + R+ N+ + +V ++
Sbjct: 199 EFLNMSTAYFKMLQKAWDSGDMDDLANYTTDDLFIELTH--KRREIKGANL-TEIVNLN- 254
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP 221
+ ++ G ++ ++ +IW V+
Sbjct: 255 ASLAGFETTPTEYVASVLFTGSL-----KENGEP--------TEIKEIWNLVKP-KEGKT 300
Query: 222 NWVLISTKLG 231
W+L +
Sbjct: 301 GWLLAGIQQA 310
>gi|241999542|ref|XP_002434414.1| conserved hypothetical protein [Ixodes scapularis]
gi|215497744|gb|EEC07238.1| conserved hypothetical protein [Ixodes scapularis]
Length = 333
Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 17/200 (8%)
Query: 34 KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
+ E+P SG G + ++ + + L G + V R I S
Sbjct: 86 RVWMERPIYTSCSGGLFDPYVPPEGDGKMSLLSQEGAMQRMRRLEKKGRSVMNV-RKIRS 144
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
DF +F +A+ Y + + E + +LV Y + ++ K ++
Sbjct: 145 YEDDFHLAEFAEQAQQIYIDVHRALAEKNKDKLHELVTENCYPELMQNVV-----NKTLR 199
Query: 154 SSLVGIDDMKIINA---------SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFG 204
I ++ A S + +T+R+ Q A YD+ L+ +
Sbjct: 200 WQF--IKSLEPPRAVHVRCEDLISKDNMFGQVTVRMHTQQTLAVYDRFGRLMHGSEVMAK 257
Query: 205 KVIDIWTFVRNIPPSNPNWV 224
V++ F +++ W
Sbjct: 258 DVLEYVVFEKHLSDLYGTWR 277
>gi|262283507|ref|ZP_06061273.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
gi|262260998|gb|EEY79698.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
Length = 310
Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 7/131 (5%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+ +R + +FD + FL++ + Y + ++ E ++ L +Y + L
Sbjct: 117 EAIRQLKQQDPNFDEERFLSQVKVIYLRLQSAWTEKDWASVRGLESPSLYDQHSTQLQEH 176
Query: 146 KSNEKNVKSSLVGIDDMKIINASIEE-NTVYITIRIVGQFISASYDKD-NLLISSDPEIF 203
+ V +++ KI + + + + D + +I DP
Sbjct: 177 IRAKTTNVLERVRVENSKIKDFYPNPQGHDRLEVILSSTMRDYIRDDETGRIIEGDP--- 233
Query: 204 GKVIDIWTFVR 214
D++T R
Sbjct: 234 --TKDLFTVYR 242
>gi|84998204|ref|XP_953823.1| mitochondrial inner membrane subunit [Theileria annulata]
gi|65304820|emb|CAI73145.1| mitochondrial inner membrane subunit, putative [Theileria annulata]
Length = 395
Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T L +R++ + F+ D + + +V+S+ +G A++ + N
Sbjct: 223 DTSLASALREMKRLDPSFNLPDLVELVEHVIAPHVVESYLKGDGEALKLHCGEVAFNILN 282
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYITIRIVGQFISASYDKDNLLISS 198
S+ R + + S++ + ++++ ++E ++ Q I+ D + +
Sbjct: 283 TSIKERNLQKLVLDPSILILKNVELKGGMKVKEGDPWLIFNFTTQQINCLRDTKGKVCAG 342
Query: 199 DPEIF 203
+ ++
Sbjct: 343 NCDVI 347
>gi|332525837|ref|ZP_08401978.1| import inner membrane translocase subunit Tim44 [Rubrivivax
benzoatilyticus JA2]
gi|332109388|gb|EGJ10311.1| import inner membrane translocase subunit Tim44 [Rubrivivax
benzoatilyticus JA2]
Length = 321
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 67/223 (30%), Gaps = 22/223 (9%)
Query: 11 FLILLFAFITFFVF-LQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
I L A + FFV LR + G + +G
Sbjct: 113 LTIALLAVVAFFVIRFLLR-----RFGPRPAAAPAAAGVGALRTGPADWTPPPAPVSPTP 167
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVY--TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ R + + FD + F A+ + + + + +
Sbjct: 168 VTPVPSAAPVAADAPVAAERTLAPAFVPAAFDSESFERVAKTIFVRLQAANDSADLDDLR 227
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ ++ + L R + +++ V + K+++ + E+ +++R VG+
Sbjct: 228 RFTTPEMFAELKMDLQDR---GSSTQTTDVVEVEAKVVDVAEEDGRQIVSVRYVGR---- 280
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ ++W V+ + + W + +
Sbjct: 281 VREEAGA-------EPVAFDEVWHLVKPVGDDSRGWAIAGIEQ 316
>gi|91786763|ref|YP_547715.1| import inner membrane translocase subunit Tim44 [Polaromonas sp.
JS666]
gi|91695988|gb|ABE42817.1| import inner membrane translocase, subunit Tim44 [Polaromonas sp.
JS666]
Length = 333
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/207 (10%), Positives = 67/207 (32%), Gaps = 29/207 (14%)
Query: 38 EKPFSGFFSGKYVFSKRDERGIITLGKGKKK--------DNLDSINELFPIGTRLNKVM- 88
++PF+ +G + + + D G+ + +
Sbjct: 140 QEPFAFQGAGNAATPRNYSPENVGNDASARPWERSGMAFDANRDAGATPATGSMIGSALL 199
Query: 89 -RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
V FD + FL ++ ++ + D++ + ++ ++ + + L+ R+S
Sbjct: 200 GTQTWGVPAGFDAEGFLKASKANFVTLQDAWDRSDIQSLRAMMTDDMLEQIKAQLADRES 259
Query: 148 N--EKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+ ++ +V ++ +++ +T ++ ++
Sbjct: 260 HTGGVVNRTEVVMLN-AQLLGIEELSDTYMASVEFS-----------GMIREDASAGASP 307
Query: 206 VIDIW--TFVRNIPPSNPNWVLISTKL 230
++W T RN W++ +
Sbjct: 308 FREVWNMTKPRNGGSG---WLVAGVQA 331
>gi|240849189|ref|NP_001155742.1| 39S ribosomal protein L45, mitochondrial [Acyrthosiphon pisum]
gi|239789330|dbj|BAH71295.1| ACYPI008057 [Acyrthosiphon pisum]
Length = 330
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 70/206 (33%), Gaps = 24/206 (11%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIV 92
+ E+ +G + G + I EL + +R I
Sbjct: 89 TRPWIERTTFINNTGSIIEPYVPPEGDGKISPISTAGAKQKI-ELLKKKKDTWQAIRKIR 147
Query: 93 SVYTDFDP-KDFLNEARNSY-----EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+F+ +F+ +A++ Y + + + V + Y + ++
Sbjct: 148 QNEEEFELYPEFITKAQDIYLKAHTTMVNK-----DKQNLLQYVTEKAYVEMLHNID--- 199
Query: 147 SNEKNVKSSLV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLISSD 199
K ++ S + I+ ++++A + + IT+R + + +D+ LI
Sbjct: 200 --NKTLRWSFIKSIEPPRVVHARVTDIITQDNLFAQITVRFHTKQTLSVFDRFGRLIFGS 257
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F ++I W +
Sbjct: 258 DVVAKDVLEYVVFEKHIVNQYGMWRI 283
>gi|325690393|gb|EGD32397.1| hypothetical protein HMPREF9382_1351 [Streptococcus sanguinis
SK115]
Length = 237
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
+ +R++ + FD + FL++A+ Y + ++ E ++ L +Y+ L
Sbjct: 43 QEAIRELKRLDPYFDEESFLSQAKAVYLHLQSAWTEKDWASVRNLESPSLYEQHRTQLQE 102
Query: 145 RKSNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKD-NLLISSDPEI 202
+ V ++D KI + + + + + D + +I DP
Sbjct: 103 HIRAKTTNVLERVCVEDSKIKDFYPNSQGHDRLEVILSSTMRDYIKDDETGRIIEGDPTK 162
>gi|307184938|gb|EFN71203.1| Probable 39S ribosomal protein L45, mitochondrial [Camponotus
floridanus]
Length = 201
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 12/130 (9%)
Query: 103 FLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV-GIDD 161
FL EA Y+ ++ K + K V Y +L K + + ++
Sbjct: 20 FLEEATEIYQKAHEALAAKKKGMLIKYVTESAYPKMIHNLMD-----KTIHWKFLESLEP 74
Query: 162 MKIINASI------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRN 215
++++A E +T+R Q I A YD+ LI + V++ F ++
Sbjct: 75 ARVVHARTTDVITKENVFAQLTVRFHTQQILAVYDRFGRLIQGSEILRKDVLEYIVFEKH 134
Query: 216 IPPSNPNWVL 225
+ W +
Sbjct: 135 LANEYGAWRI 144
>gi|327275540|ref|XP_003222531.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Anolis
carolinensis]
Length = 316
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 26/153 (16%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDS------FFEGKVHAI-EKLVDSRVYQDFN 139
+R I DF K F +A++ + +++ F + K+HA+ + +
Sbjct: 133 AIRKIKDYDPDFSTKTFAEKAQDIF---IEAHNNLTNFNKEKMHALVTEYCFPDM----- 184
Query: 140 DSLSTRKSNEKNVKSSLV-GIDDMKIINA------SIEENTVYITIRIVGQFISASYDKD 192
R + K ++ S + ++ +++ S + +T+R+ + A YD+
Sbjct: 185 ----VRGNRYKTIRWSFLESLEPPRVVQVRCPTMVSKDNLYGQVTVRMHSRQTLAIYDRF 240
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
L+ +I V++ F R++ W L
Sbjct: 241 GRLMYGGEQIPKDVLEYLVFERHLVNPYGQWRL 273
>gi|83320119|ref|NP_001030272.1| 39S ribosomal protein L45, mitochondrial precursor [Bos taurus]
gi|88932615|sp|Q3T142|RM45_BOVIN RecName: Full=39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|74267993|gb|AAI02137.1| Mitochondrial ribosomal protein L45 [Bos taurus]
Length = 306
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 122 IRRIKESDPNFKVKDFPEKAQDIFIEAHLCLNNSDHDRLHTLVTENCFPDMVWDIK---- 177
Query: 148 NEKNVKSSLV-GIDDMKIINAS------IEENTVYITIRIVGQFISASYDKDNLLISSDP 200
K V S V ++ +++ +T+R+ + A YD+ L+
Sbjct: 178 -YKTVSWSFVESLEPPQVVQVRCSSLVTKSNTYGQVTVRMHTRQTLAIYDRFGRLMYGQE 236
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 237 DVPRDVLEYVVFEKHLANPYGSWR 260
>gi|46581175|ref|YP_011983.1| hypothetical protein DVU2771 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450596|gb|AAS97243.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
Length = 321
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 19/136 (13%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD + F+ A+ ++ + S+ + + I + V + + + ++
Sbjct: 200 GFDIEQFIKGAKMAFTRLQASWDKRDLEDISQFSTPAVLD----EIRRQAEADPVPSTTE 255
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP--EIFGKVIDIWTFVR 214
+ + + ++ E T+ ++L+ DP + V ++W FVR
Sbjct: 256 ILLVNANLLGVVEENGQQTATVFF------------DVLLREDPRQDAPTSVREVWHFVR 303
Query: 215 NIPPSNPNWVLISTKL 230
+ + W L +
Sbjct: 304 PVKGTG-MWQLDGIQQ 318
>gi|120601588|ref|YP_965988.1| import inner membrane translocase, subunit Tim44 [Desulfovibrio
vulgaris DP4]
gi|120561817|gb|ABM27561.1| import inner membrane translocase, subunit Tim44 [Desulfovibrio
vulgaris DP4]
gi|311234849|gb|ADP87703.1| import inner membrane translocase subunit Tim44 [Desulfovibrio
vulgaris RCH1]
Length = 311
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 19/136 (13%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD + F+ A+ ++ + S+ + + I + V + + + ++
Sbjct: 190 GFDIEQFIKGAKMAFTRLQASWDKRDLEDISQFSTPAVLD----EIRRQAEADPVPSTTE 245
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP--EIFGKVIDIWTFVR 214
+ + + ++ E T+ ++L+ DP + V ++W FVR
Sbjct: 246 ILLVNANLLGVVEENGQQTATVFF------------DVLLREDPRQDAPTSVREVWHFVR 293
Query: 215 NIPPSNPNWVLISTKL 230
+ + W L +
Sbjct: 294 PVKGTG-MWQLDGIQQ 308
>gi|226942212|ref|YP_002797285.1| Tim44-like domain-containing protein [Azotobacter vinelandii DJ]
gi|226717139|gb|ACO76310.1| Tim44-like domain protein [Azotobacter vinelandii DJ]
Length = 284
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 56/183 (30%), Gaps = 18/183 (9%)
Query: 48 KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
+ + ++R + G + + G R + F+ + FL A
Sbjct: 118 RLIVARRRKLHPAVAGHAPMQRETPAQPRPAATGAAQR---RAPIQAPAWFNEQRFLEAA 174
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
R + A+ + ++ I + V ++ + F R +S+ + +++
Sbjct: 175 RQHFTALQQHWDANELDKIAEFVTPQMLE-FIR--KERAELGDGFQSTYIDNLQVQLDGV 231
Query: 168 SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
+ T+ G +S + + W R + P W++
Sbjct: 232 DDLADKTVATLTFSG-VSKSSRFEQGE----------TFSESWRMERRQGENQP-WLIAG 279
Query: 228 TKL 230
+
Sbjct: 280 IRQ 282
>gi|170699198|ref|ZP_02890251.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria IOP40-10]
gi|170135923|gb|EDT04198.1| import inner membrane translocase subunit Tim44 [Burkholderia
ambifaria IOP40-10]
Length = 218
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 71/234 (30%), Gaps = 29/234 (12%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M + +I L A I +R + ++ E +S S S G
Sbjct: 1 MMANVIVIALLAMIG---IWLVRKFMNRRRSQEPAYSVGGSASSSGSYSQSPSFQQGSTG 57
Query: 66 KKKDNLDSINELFPIG---------TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVD 116
S G + + V FD + FL A+ + +
Sbjct: 58 NNYAGSGSSYANEAQGVFGGGAAAAGAAGAMAGAPLQVPAGFDTEAFLRSAKVYFVRLQA 117
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
++ +G + I + ++ + L +R ++ +V + D +++
Sbjct: 118 AWDQGNLADIREFTTPEMFAEIKIDLDSR--GNDANQTDVVQL-DAELVAIEDRGIEQSA 174
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R G I S + + ++W + + W+L +
Sbjct: 175 SVRFHG-LIRESANAPAAPLD----------EVWNLSK---SGSQGWLLAGIQQ 214
>gi|188581463|ref|YP_001924908.1| import inner membrane translocase subunit Tim44 [Methylobacterium
populi BJ001]
gi|179344961|gb|ACB80373.1| import inner membrane translocase subunit Tim44 [Methylobacterium
populi BJ001]
Length = 318
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 66/229 (28%), Gaps = 41/229 (17%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFS-GKYVFSKRDERGIITLGKGKK 67
++ + F + ++ + +G + + + G
Sbjct: 124 FQIGLIALLVMLAVRFFR------RRQEGQPAMAGNSAYARSGPPPQGGANPGMNPMGGG 177
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE----AIVDSFFEGKV 123
+ + + P DF ++E I ++ V
Sbjct: 178 YGGGAARPQPVQVQ------------------PDDF-----QAFERSLNEIQAAYGREDV 214
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
A+ +L + F + L + + S V + + A E + T+ +
Sbjct: 215 AALRRLATPEMVGYFEEDLRANAARGVVNRISDVKLLQGDLSEAWREGRVEFATVAMRFS 274
Query: 184 FISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+++ + + P + + WTFVR W+L + + G
Sbjct: 275 LRDEVFERATNRHVENGP---QEAKEFWTFVREPGGP---WLLSAIQQG 317
>gi|148284459|ref|YP_001248549.1| hypothetical protein OTBS_0806 [Orientia tsutsugamushi str.
Boryong]
gi|146739898|emb|CAM79872.1| hypothetical protein OTBS_0806 [Orientia tsutsugamushi str.
Boryong]
Length = 211
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 26/143 (18%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+ + S F+ F N A N + I+++ I L+D R F+ S
Sbjct: 93 LIKLKSKVPSFNINRFYNTAINVIKMIIEAVQNVDYKTIFSLLDKRFVDQFHQM----SS 148
Query: 148 NEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
N+ + + + + N ++I IRI I+ + K+
Sbjct: 149 KYANIHVNSINFKLSNLNS---LGNNIFIKIRIE--------------INGN-----KLK 186
Query: 208 DIWTFVRNIPPSNPNWVLISTKL 230
+ WTF +NI P W L + +
Sbjct: 187 EEWTFSKNITTPGPQWYLSNIEE 209
>gi|239906247|ref|YP_002952987.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239796112|dbj|BAH75101.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 280
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 64/224 (28%), Gaps = 35/224 (15%)
Query: 20 TFFVFLQLRGVL-GKKTGN----EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSI 74
FV + VL G++ N + P + G + +
Sbjct: 76 AMFVLFR---VLSGRRNKNGDQTQAPPRSDDQDDRDDDAPPQNQPPRRGPDMYTNAQATW 132
Query: 75 NELFPIGTRLNKVMRDIVSVYTDF-------DPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ L R R ++FL A+ +Y I S +
Sbjct: 133 DMLRSPDKRPGTPARADGQAAPPAPANAPAGSDEEFLAGAKMAYSRIAASLGGRDFGDLA 192
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
V + + + G D+ +INA++ E G+ +
Sbjct: 193 SFVSPAYL----------AELQNTLPQTPAGRPDILLINAALAERRET-----PGRTVMV 237
Query: 188 SYDKDNLLISSDPEIFGKV--IDIWTFVRNIPPSNPNWVLISTK 229
D +++ P + WTF R+ NW+L + +
Sbjct: 238 V---DYDVLARQPGATENTTLRERWTFSRDNAAPGANWLLDAMQ 278
>gi|242018556|ref|XP_002429740.1| mitochondrial 50S ribosomal protein L45, putative [Pediculus
humanus corporis]
gi|212514752|gb|EEB17002.1| mitochondrial 50S ribosomal protein L45, putative [Pediculus
humanus corporis]
Length = 306
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 59/194 (30%), Gaps = 26/194 (13%)
Query: 47 GKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNE 106
Y D + I G I + R I + ++F+ K F E
Sbjct: 69 NPYEPPPGDGKSSIIPKVGST-----CIVDKVKEQKDYMLAKRQITNYDSNFNTKVFPQE 123
Query: 107 ARNSYE---AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVG----- 158
A + Y I+ + + + V + + K ++ +
Sbjct: 124 AHDIYVKAHTILM---KNDPEELSEYVTESAIMEMMSGIK-----NKTLRWKFIESLEPP 175
Query: 159 -IDDMKIINASIEEN-TVYITIRIVGQFIS---ASYDKDNLLISSDPEIFGKVIDIWTFV 213
I M + E N +T+R + S A YD+ L I V++ F
Sbjct: 176 KIVQMSVAPVIQESNLFGQVTVRFHTKQASTMLAIYDRFGRLFYGSETIAKDVLEYVVFE 235
Query: 214 RNIPPSNPNWVLIS 227
++I W L +
Sbjct: 236 KHIVNEYGTWRLHA 249
>gi|239817097|ref|YP_002946007.1| import inner membrane translocase subunit Tim44 [Variovorax
paradoxus S110]
gi|239803674|gb|ACS20741.1| import inner membrane translocase subunit Tim44 [Variovorax
paradoxus S110]
Length = 337
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/251 (10%), Positives = 72/251 (28%), Gaps = 42/251 (16%)
Query: 7 DSGDFLILLFAFITFFVFLQL---RGVLGKKTGNEKPFSGFFSGKYVF---SKRDERGII 60
+ L++ + ++ R +G +P F G S +
Sbjct: 100 GFANILLIGLLVMAGLFVWRMFKARSA--ASSGANRPGGFAFEGAGNPANASAPAQYSPA 157
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVY-------------------TDFDPK 101
+G + F G+ + FD
Sbjct: 158 NVGNDASARPWERNTAAFDAGSSAHGSSLSAAGAAAGGSMIGSALSGSQSWGIPAGFDVD 217
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN--EKNVKSSLVGI 159
FL+ A+ ++ + D++ V + ++ + ++ L+ R S+ + K+ +V +
Sbjct: 218 GFLSAAKRNFVTLQDAWDRADVSMLRSMMTDDMVEEIRSQLADRASHTGGASNKTEVVML 277
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D K++ + ++ ++ G ++W +
Sbjct: 278 -DAKLLGIEELADAYLASVEFS-----------GMIREDASAGPGPFREVWNMTKP-TSG 324
Query: 220 NPNWVLISTKL 230
W++ +
Sbjct: 325 TSGWLVAGVQA 335
>gi|254707405|ref|ZP_05169233.1| calcium-binding EF-hand [Brucella pinnipedialis M163/99/10]
Length = 29
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 204 GKVIDIWTFVRNIPPSNPNWVLISTKLGE 232
++ D+WTF R+ +PNW L++T+ +
Sbjct: 1 VEIKDLWTFARDTNSRDPNWKLVATEAED 29
>gi|330812676|ref|YP_004357138.1| hypothetical protein PSEBR_a5598 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380784|gb|AEA72134.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 291
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 67/221 (30%), Gaps = 33/221 (14%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ A I F+ + F + + + ++
Sbjct: 102 IFDILIMAVIA-FLVFR-----------------FIAARRRKQQEQFAPAGHAPMQREVF 143
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
N + G+ R +++ F+ + F+ AR+ + ++ + ++ I +
Sbjct: 144 NQQPASGSIFGGSAAPVAARPVINAPAWFNEQRFIEAARSHFMSLQQHWDANEMDKIAEF 203
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ + R +S+ + +++ + T+ G + +
Sbjct: 204 VTPQLLEFLKR---ERAELGDGFQSTYIDNLHVQLDGVDDRADKTIATLTFSGVSKDSRF 260
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
DK + W R + W++ +
Sbjct: 261 DKGEA-----------FSESWNMERAQG-DDQPWLVAGIRQ 289
>gi|167718139|ref|ZP_02401375.1| hypothetical protein BpseD_03908 [Burkholderia pseudomallei DM98]
Length = 129
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 47/143 (32%), Gaps = 17/143 (11%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN 148
+V FD + FL A+ + + ++ EG + I + ++ + L R +
Sbjct: 1 AAAPAVPAGFDTEAFLRNAKVYFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAG 60
Query: 149 EKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVID 208
++ +V + D +++ ++R G + +
Sbjct: 61 AN--QTDVVQL-DAELLAVEDRGGEHLASVRFHG----LIRETQGAAAE-------PFDE 106
Query: 209 IWTFVRNIPPSNPNWVLISTKLG 231
+W + + W+L +
Sbjct: 107 VWNLSK---SGSQGWLLAGIQQA 126
>gi|325522769|gb|EGD01254.1| import inner membrane translocase subunit Tim44 [Burkholderia sp.
TJI49]
Length = 124
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 47/134 (35%), Gaps = 17/134 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD FL A+ + + ++ +G + I + ++ + L +R + ++ +
Sbjct: 4 GFDADAFLRSAKVYFVRLQAAWDQGNLADIREFTTPEMFAEIKIDLDSR--GNEANQTDV 61
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + D +++ ++R G I S + ++W ++
Sbjct: 62 VQL-DAELVAVEDRGIEQSASVRFHG-LIRESANAPAEPFD----------EVWNLSKSG 109
Query: 217 PPSNPNWVLISTKL 230
W+L +
Sbjct: 110 GQG---WLLAGIQQ 120
>gi|321469612|gb|EFX80592.1| hypothetical protein DAPPUDRAFT_303989 [Daphnia pulex]
Length = 327
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 23/195 (11%)
Query: 34 KTGNEKPFS-----GFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVM 88
++ E+P F + +TLG K+ EL ++ +
Sbjct: 86 RSWMERPVFVSATSSVFEAYVPPEGDGKLSALTLGGAKQS------MELLSKKSKSMMAV 139
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN 148
R I S DF K F EA+ Y + E + + V Y D L
Sbjct: 140 RKIKSFEEDFSTKYFPEEAQEIYLKAHKALAEKDDDTLHQCVTELCYPLMTDDL-----R 194
Query: 149 EKNVKSSLV-GIDDMKIINAS------IEENTVYITIRIVGQFISASYDKDNLLISSDPE 201
V+ + ++ ++++A E +T+R Q A YD+ LI +
Sbjct: 195 SCTVRWQFLKSLEPPRVVHARCTEVINKENIFSQVTVRFNTQQTLAVYDRFGRLIYGNEV 254
Query: 202 IFGKVIDIWTFVRNI 216
+ V++ F +++
Sbjct: 255 VAKDVLEYVVFEKHL 269
>gi|73853856|ref|NP_001027509.1| 39S ribosomal protein L45, mitochondrial precursor [Xenopus
(Silurana) tropicalis]
gi|82249321|sp|Q4QQQ4|RM45_XENTR RecName: Full=39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|67867480|gb|AAH98093.1| hypothetical protein mgc108142 [Xenopus (Silurana) tropicalis]
Length = 309
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R + ++F K F +A+ + A + H + LV R Y + R
Sbjct: 121 AIRKVKEYDSEFTTKTFPEKAQELFIAAHQCLTKFDRHELHTLVTERCYPEMV-----RG 175
Query: 147 SNEKNVKSSLV-GIDDMKIINAS-----IEENT-VYITIRIVGQFISASYDKDNLLISSD 199
+ + ++ S V I+ +++ + N +T+R+ + YD+ ++
Sbjct: 176 NRYRTIQWSFVESIEAPRVVQVRCPEMVSKGNLYAQVTVRMHNKQSLTIYDRFGRVMCGS 235
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWV 224
E V++ F R++ W
Sbjct: 236 -EEPRDVLEYVVFERHMVNPYGTWR 259
>gi|67607228|ref|XP_666797.1| mitochondrial import inner membrane translocase [Cryptosporidium
hominis TU502]
gi|54657855|gb|EAL36565.1| mitochondrial import inner membrane translocase [Cryptosporidium
hominis]
Length = 424
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVY 135
G +++KV++++ ++ +F DF+ + +E ++S+ + H + Y
Sbjct: 251 GNKISKVVKEMKAINPNFKLTDFM----SFFEEYILPKFMESYLKCDEHKLRLHCGDVAY 306
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE------------NTVYITIRIVGQ 183
+ ++ K + + ++ + D+++I A I + N Q
Sbjct: 307 RQLCSNIKKLKKMGLCLNTKILQLGDVELIGAEISDLMFSFKDCKIQANQPEFMFTFKTQ 366
Query: 184 FISASYDKDNLLISSDPEIFGK 205
I+ D + +IS + +
Sbjct: 367 QINYLKDSNGRIISGSIDDIKE 388
>gi|160900892|ref|YP_001566474.1| import inner membrane translocase subunit Tim44 [Delftia
acidovorans SPH-1]
gi|160366476|gb|ABX38089.1| import inner membrane translocase subunit Tim44 [Delftia
acidovorans SPH-1]
Length = 338
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 60/191 (31%), Gaps = 17/191 (8%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK 101
S + +Y K + + + IG+ L V FD +
Sbjct: 161 SAPLARQYNPEKVGNDASARPWEQNHQPAALASGSGVQIGSALAG--SQNWGVPEGFDTE 218
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN--EKNVKSSLVGI 159
FL A+ ++ + ++ + ++ ++ + + LS R+ + ++ +V I
Sbjct: 219 GFLTAAKRNFVTLQSAWDRSDIASLRAMMTDEMLTEIRGQLSEREVQRPGQPNQTDVVMI 278
Query: 160 DDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
D +++ N ++ ++ ++W +
Sbjct: 279 -DAQLLGIEDLGNDYMASVEFS-----------GMIREDASAGPTPFREVWNMTKP-KSG 325
Query: 220 NPNWVLISTKL 230
+ W++ +
Sbjct: 326 SSGWLVAGVQA 336
>gi|167892865|ref|ZP_02480267.1| hypothetical protein Bpse7_03801 [Burkholderia pseudomallei 7894]
Length = 133
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD + FL A+ + + ++ EG + I + ++ + L R + ++ +
Sbjct: 13 GFDTEAFLRNAKVYFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDV 70
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + D +++ ++R G + ++W +
Sbjct: 71 VQL-DAELLAVEDRGGEHLASVRFHG----LIRETQGAAAE-------PFDEVWNLSK-- 116
Query: 217 PPSNPNWVLISTKLG 231
+ W+L +
Sbjct: 117 -SGSQGWLLAGIQQA 130
>gi|167737169|ref|ZP_02409943.1| hypothetical protein Bpse14_03836 [Burkholderia pseudomallei 14]
Length = 135
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD + FL A+ + + ++ EG + I + ++ + L R + ++ +
Sbjct: 15 GFDTEAFLRNAKVYFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDV 72
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + D +++ ++R G + ++W +
Sbjct: 73 VQL-DAELLAVEDRGGEHLASVRFHG----LIRETQGAAAE-------PFDEVWNLSK-- 118
Query: 217 PPSNPNWVLISTKLG 231
+ W+L +
Sbjct: 119 -SGSQGWLLAGIQQA 132
>gi|256394912|ref|YP_003116476.1| import inner membrane translocase subunit Tim44 [Catenulispora
acidiphila DSM 44928]
gi|256361138|gb|ACU74635.1| import inner membrane translocase subunit Tim44 [Catenulispora
acidiphila DSM 44928]
Length = 448
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 62/174 (35%), Gaps = 10/174 (5%)
Query: 62 LGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEG 121
L G + S T++ + + + P+ A Y ++ +
Sbjct: 94 LNTGSDRTAHRSDAAAAQRATQIEARVAAVADNDPTYAPEALKARAVWLYTTAQRAWSDR 153
Query: 122 KVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+++++ +Y +++ L +S + +V ++++N + V TI
Sbjct: 154 DRAVLKQILSPVLYVKWDEELRDYQSRGEINTVDIVSGPSVQMVNIANRAGEVNDTITFR 213
Query: 182 GQFISASYDKDNLLISSDP----EIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
I+A+ + + + + + ++ WT ++ W++ S +
Sbjct: 214 ---ITATLNDRVVRANGSHAVRKDGSTRPVEYWTLRKDASGE---WMVASIEQA 261
>gi|18043288|gb|AAH20130.1| Mitochondrial ribosomal protein L45 [Mus musculus]
Length = 306
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 12/148 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R I T+F KDF +A++ + + LV + D
Sbjct: 121 AIRKIREFDTNFKTKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMV-----WD 175
Query: 147 SNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQFISASYDKDNLLISSD 199
K V+ V ++ ++++ +T+R+ + A YD+ L+
Sbjct: 176 LKYKTVRWGFVESLEPAQVVHVRCSGLVNQSNMYGQVTVRLHTRQTLAIYDRFGRLMYGQ 235
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
++ V++ F R++ +W + +
Sbjct: 236 EDVPKDVLEYVVFERHLMNPYGSWRMHA 263
>gi|167814302|ref|ZP_02445982.1| hypothetical protein Bpse9_04118 [Burkholderia pseudomallei 91]
Length = 141
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD + FL A+ + + ++ EG + I + ++ + L R + ++ +
Sbjct: 21 GFDTEAFLRNAKVYFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDV 78
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + D +++ ++R G + ++W +
Sbjct: 79 VQL-DAELLAVEDRGGEHLASVRFHG----LIRETQGAAAE-------PFDEVWNLSK-- 124
Query: 217 PPSNPNWVLISTKLG 231
+ W+L +
Sbjct: 125 -SGSQGWLLAGIQQA 138
>gi|146280567|ref|YP_001170720.1| hypothetical protein PST_0171 [Pseudomonas stutzeri A1501]
gi|145568772|gb|ABP77878.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
gi|327478845|gb|AEA82155.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 280
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 69/218 (31%), Gaps = 37/218 (16%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
IL+F I F+ + L + ++P + + I G
Sbjct: 98 ILIFGLIA-FLLFRF---LAARRRQQQPAMAGHAPMQREMPQQPATSIFGGSAAPVAAAP 153
Query: 73 SINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS 132
IN F+ ++F+ AR + ++ + ++ I + V
Sbjct: 154 VINAPA------------------WFNEQNFVAAAREHFLSLQQHWDANEMDKIAEFVTP 195
Query: 133 RVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
++ R +S+ IDD++I +++N + +A+
Sbjct: 196 QLLGFLKQ---ERAEIGDAYQST--YIDDLQIQLDGVDDN---------AEKTTATLTFS 241
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ +S + + W R + P W++ +
Sbjct: 242 GVAKTSRFDQGEPFSESWRMERVQGENQP-WLVAGIRQ 278
>gi|13385418|ref|NP_080203.1| 39S ribosomal protein L45, mitochondrial precursor [Mus musculus]
gi|29611870|sp|Q9D0Q7|RM45_MOUSE RecName: Full=39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|12847109|dbj|BAB27440.1| unnamed protein product [Mus musculus]
gi|26349471|dbj|BAC38375.1| unnamed protein product [Mus musculus]
gi|74180509|dbj|BAE34190.1| unnamed protein product [Mus musculus]
gi|123209263|emb|CAM26393.1| mitochondrial ribosomal protein L45 [Mus musculus]
gi|123258869|emb|CAM27000.1| mitochondrial ribosomal protein L45 [Mus musculus]
gi|148684129|gb|EDL16076.1| mitochondrial ribosomal protein L45 [Mus musculus]
Length = 306
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 53/148 (35%), Gaps = 12/148 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R I +F KDF +A++ + + LV + D
Sbjct: 121 AIRKIREFDANFKTKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMV-----WD 175
Query: 147 SNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQFISASYDKDNLLISSD 199
K V+ V ++ ++++ +T+R+ + A YD+ L+
Sbjct: 176 LKYKTVRWGFVESLEPAQVVHVRCSGLVNQSNMYGQVTVRLHTRQTLAIYDRFGRLMYGQ 235
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
++ V++ F R++ +W + +
Sbjct: 236 EDVPKDVLEYVVFERHLMNPYGSWRMHA 263
>gi|73966162|ref|XP_850801.1| PREDICTED: similar to mitochondrial ribosomal protein L45 [Canis
familiaris]
Length = 303
Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 18/205 (8%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK------ 86
+K G P ++ +G + + + L +L K
Sbjct: 61 RKAGLVIPPERLERPLHLACTAGIFDAYVPPEGDARLSSLAKEGLAQRSEQLKKKVASQL 120
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R I +F KDF +A++ + + LV + D +
Sbjct: 121 SIRKIREHDPNFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTENCFPDMVWDIK--- 177
Query: 147 SNEKNVKSSLV-GIDDMKIINAS-----IEENT-VYITIRIVGQFISASYDKDNLLISSD 199
K V+ S V ++ +++ + N +T+R+ + A YD+ L+
Sbjct: 178 --YKTVRWSFVESLEPPQVVQVRCSNLLNQGNIYGQVTVRMHTRQTLAIYDRFGRLMYGQ 235
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 236 EDVPRDVLEYVVFEKHLVNPYGSWR 260
>gi|209735096|gb|ACI68417.1| 39S ribosomal protein L45, mitochondrial precursor [Salmo salar]
gi|303659089|gb|ADM15945.1| 39S ribosomal protein L45, mitochondrial precursor [Salmo salar]
Length = 317
Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 12/158 (7%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
E +R I ++F K F +A+ + ++ + + LV R
Sbjct: 116 TEQIKQDAASQLAIRKIKEHESEFTTKAFPVKAQEIFVDAHNALTQFNKEKLHSLVTERC 175
Query: 135 YQDFNDSLSTRKSNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQFISA 187
Y + R++ K ++ V ++ K+++A + +T+R+ + A
Sbjct: 176 YPEMV-----RRNRYKTLRWHFVESLEPPKVVHARCPDMVSKGDMYGQVTVRMHSRQTLA 230
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
Y + L+ E V++ R++ W L
Sbjct: 231 VYGRFGRLMMGSEEEPRDVLEYLVLERHLVNHYGMWRL 268
>gi|221103937|ref|XP_002159080.1| PREDICTED: similar to mitochondrial ribosomal protein L45, partial
[Hydra magnipapillata]
gi|221118615|ref|XP_002159504.1| PREDICTED: similar to mitochondrial ribosomal protein L45, partial
[Hydra magnipapillata]
Length = 99
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 154 SSLV-GIDDMKIINASI-----EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
V ++ ++INA++ + +T+R+ + I D+ N +++ DP+ VI
Sbjct: 15 WRFVKEVEKPRVINAALSAVSENDLYAQVTVRLHTEQILTIRDRFNRIVTGDPKTPRSVI 74
Query: 208 DIWTFVRNIPPSNPNWVLIS 227
D F R++P W +
Sbjct: 75 DYVVFERHLPDPYGKWRICG 94
>gi|41053493|ref|NP_956601.1| 39S ribosomal protein L45, mitochondrial [Danio rerio]
gi|29476850|gb|AAH50166.1| Mitochondrial ribosomal protein L45 [Danio rerio]
Length = 251
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 55/154 (35%), Gaps = 12/154 (7%)
Query: 79 PIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF 138
P + +R I + F K+F + + + E + LV R Y +
Sbjct: 54 PSTSHAQLAIRKIKDYDSTFTSKEFPGIGQQIFIDAHAALTEFNKEKLHSLVTERCYPEM 113
Query: 139 NDSLSTRKSNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQFISASYDK 191
R + K ++ + ++ +++ A + +T+R+ + A YD+
Sbjct: 114 V-----RGNRYKTLRWRFIESLEPPRLVQARCPDMISKGNLYGQVTVRMHSRQTLAIYDR 168
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
L+ D E V++ R++ W L
Sbjct: 169 FGRLMLGDEEEPRDVLEYLVMERHLVNPYGRWRL 202
>gi|268575792|ref|XP_002642876.1| Hypothetical protein CBG15146 [Caenorhabditis briggsae]
gi|74784622|sp|Q616T6|RM45_CAEBR RecName: Full=Probable 39S ribosomal protein L45, mitochondrial;
Flags: Precursor
gi|187027386|emb|CAP33598.1| hypothetical protein CBG_15146 [Caenorhabditis briggsae AF16]
Length = 361
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 13/142 (9%)
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
+ FD K F +A + YE + + + + + + +
Sbjct: 168 KQGFEKFDVKTFCAKAEDIYERAHKAMEARDKKEMYRCITEYAFAKMWPDVE-----NGS 222
Query: 152 VKSSLVGIDDMKIINA--------SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
V+ LV I + + A + IT+R+ + A YD+ LI +
Sbjct: 223 VRFELVSIVEPSRVVAVRCFDNPPKSGNDIAQITVRMHTRQKLALYDRFGGLILGSEDEE 282
Query: 204 GKVIDIWTFVRNIPPSNPNWVL 225
V++ F +I + W L
Sbjct: 283 KDVVEYVVFENHIAVVDGEWRL 304
>gi|300309983|ref|YP_003774075.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300072768|gb|ADJ62167.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 242
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 70/228 (30%), Gaps = 25/228 (10%)
Query: 6 MDSGDFLILLFAFITFFVF--LQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLG 63
M S + L A FV + +K+ +P + +
Sbjct: 31 MISTILTVALIALAIMFVVRMFR------RKSEASQPAPAWAGAAPQAADNASATPQIGS 84
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
K + + + G N V FD F+ A+ + + ++ + +
Sbjct: 85 MLKTDQSAAAATQGGFGGGFGNAEQAPAYGVPAGFDTVGFVRNAKTYFIRLQAAWDKADI 144
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
+ I + ++ + + R + + ++ +V + D +++ N +++ G
Sbjct: 145 NDIREFTTPEMFAELRLQIQERGAA--SNQTDVVSL-DAEVLGVETVGNDYLASVKFFG- 200
Query: 184 FISASYDKDNLLISSDPEI-FGKVIDIWTFVRNIPPSNPNWVLISTKL 230
I DP + +IW + WVL +
Sbjct: 201 -----------FIKEDPTASPAQFAEIWNLSKP-AAGQGGWVLAGIQQ 236
>gi|300705184|ref|YP_003746787.1| hypothetical protein RCFBP_21025 [Ralstonia solanacearum CFBP2957]
gi|299072848|emb|CBJ44204.1| conserved membrane protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 348
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/245 (12%), Positives = 72/245 (29%), Gaps = 43/245 (17%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKT-------------GNEKPFSGFFSGKYVFSKRDERGI 59
++L A + F V +R + G + G+ +P+ +
Sbjct: 118 LILIAIVAFVVMWIIRKLRGTRAQGPAYATGGPSLGGDREPYVPSPAAPAAQPAAPVAAS 177
Query: 60 ITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVY-------------TDFDPKDFLNE 106
+ G L + + L + DFD + FL
Sbjct: 178 TSTGSAGNASGLGAGAQTAAQAWSLGGPAAPVADAPAAAPVAQQPWGVPADFDTQAFLRN 237
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
A+ + + ++ ++ I + ++ + L+ R + + +V + + +++
Sbjct: 238 AKVYFIRLQAAWDTANLNDIREFTTPEMFAEIKMDLADRGTAPNK--TDVVSV-EAELLG 294
Query: 167 ASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI-FGKVIDIWTFVRNIPPSNPNWVL 225
++R G +I D ++W + S WVL
Sbjct: 295 IETHPTEYLASVRFSG------------MIREDANAPAQPFAEVWNLTKPTQGSG-GWVL 341
Query: 226 ISTKL 230
+
Sbjct: 342 AGIQQ 346
>gi|193211982|ref|YP_001997935.1| hypothetical protein Cpar_0309 [Chlorobaculum parvum NCIB 8327]
gi|193085459|gb|ACF10735.1| hypothetical protein Cpar_0309 [Chlorobaculum parvum NCIB 8327]
Length = 490
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 20/169 (11%)
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRD--IVSVYTDFDPKDFLNEARNSYEAIVDSF 118
+ K +KK N ++ E P T ++ FD FL + R ++ + ++
Sbjct: 91 VVAKFRKKSNENAFGEPVPEATPDARIDNTPLFPGAPPGFDQSAFLAKVRKAFLEVQRAW 150
Query: 119 FEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN------ 172
+ + + VYQ FN + ++ S + I + +
Sbjct: 151 SAQSTDMMRRFISDGVYQRFNTQFKMMRLLQQGNPLSNINISMAWVDRIEQDGRYDIVHA 210
Query: 173 --TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
+T R + + D++ + ++ W+F+R +
Sbjct: 211 GIKASMTDRFICAL-NHDLDEEG---------TNEFVEYWSFIRKRGAA 249
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 64/162 (39%), Gaps = 13/162 (8%)
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFE 120
L + ++D+ + L+ + ++V+VY DF + ++A N++ ++ +
Sbjct: 291 VLAEITQQDDYRRDGDRAEKMPGLDAKVAEMVTVYGDFSVQLVEDKASNAWMQMMTAKAM 350
Query: 121 GKVHAIEKLVDSRVYQDFNDSLST-RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR 179
+ + V +++ R+ + + ++ + +I A + +T
Sbjct: 351 HNPAIMRRFVADDLFRQLAPKYEQNREIFNR------IFLNRVTLIKAEQRDGKNILTFA 404
Query: 180 IVG--QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
+ Q S + + L+ DPEI + +I T R+
Sbjct: 405 LTASIQRASLTGNSVRLI---DPEIVER-EEIMTLTRDATAG 442
>gi|114676397|ref|XP_512553.2| PREDICTED: 39S ribosomal protein L45, mitochondrial [Pan
troglodytes]
Length = 306
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 18/205 (8%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVM---- 88
+K G P ++ +G + + S L R+ K M
Sbjct: 61 RKAGLVIPPEKSNRSIHLACTAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMASQV 120
Query: 89 --RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
R I +F KDF +A++ + + LV + D +
Sbjct: 121 SIRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK--- 177
Query: 147 SNEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSD 199
K V+ S V + ++ + + N IT+R+ + A YD+ L+
Sbjct: 178 --YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQ 235
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 236 EDVPKDVLEYVVFEKQLTNPYGSWR 260
>gi|313496366|gb|ADR57732.1| Import inner membrane translocase [Pseudomonas putida BIRD-1]
Length = 284
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 69/222 (31%), Gaps = 34/222 (15%)
Query: 11 FLILLFAFIT--FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F I+ F + F+ + F + + + ++
Sbjct: 93 FQIMDFLIVALIAFLVFR-----------------FIAARRRQQQPQMAMPGHAPMQREA 135
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ +F +++ F+ + FL ARN ++++ + ++ I +
Sbjct: 136 HAQPAQPSIFGGSAAPAATAAPVINAPAWFNEQSFLAAARNHFQSLQQHWDANEMDKISE 195
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ + R +S+ + ++++ + T+ G ++
Sbjct: 196 FVTPQMLEFLKR---ERAELGDGFQSTYIDNLEVQLDGVDDRADRTDATLTFRGVSKNSR 252
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D + S W VR + P W++ +
Sbjct: 253 FD-QGEVFSES----------WHMVRAQGENQP-WLVAGIRQ 282
>gi|221102145|ref|XP_002170372.1| PREDICTED: similar to mitochondrial ribosomal protein L45, partial
[Hydra magnipapillata]
Length = 98
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 159 IDDMKIINASI-----EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
++ ++INA++ + +T+R+ + I D+ N +++ DP+ VID F
Sbjct: 20 VEKPRVINAALSAVSENDLYAQVTVRLHTEQILTIRDRFNRIVTGDPKTPRSVIDYVVFE 79
Query: 214 RNIPPSNPNWVLIS 227
R++P W +
Sbjct: 80 RHLPDPYGKWRICG 93
>gi|194374347|dbj|BAG57069.1| unnamed protein product [Homo sapiens]
Length = 329
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 145 IRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK---- 200
Query: 148 NEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S V + ++ + + N IT+R+ + A YD+ L+
Sbjct: 201 -YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQE 259
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 260 DVPKDVLEYVVFEKQLTNPYGSWR 283
>gi|34304322|ref|NP_115727.3| 39S ribosomal protein L45, mitochondrial precursor [Homo sapiens]
Length = 306
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 122 IRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK---- 177
Query: 148 NEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S V + ++ + + N IT+R+ + A YD+ L+
Sbjct: 178 -YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQE 236
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 237 DVPKDVLEYVVFEKQLTNPYGSWR 260
>gi|29611869|sp|Q9BRJ2|RM45_HUMAN RecName: Full=39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|120660040|gb|AAI30383.1| Mitochondrial ribosomal protein L45 [Homo sapiens]
gi|120660352|gb|AAI30385.1| Mitochondrial ribosomal protein L45 [Homo sapiens]
gi|313883266|gb|ADR83119.1| mitochondrial ribosomal protein L45 [synthetic construct]
Length = 306
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 122 IRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK---- 177
Query: 148 NEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S V + ++ + + N IT+R+ + A YD+ L+
Sbjct: 178 -YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQE 236
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 237 DVPKDVLEYVVFEKQLTNPYGSWR 260
>gi|303246498|ref|ZP_07332777.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302492208|gb|EFL52083.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 267
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 26/197 (13%)
Query: 34 KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
++G +P+ G KRD + D++ T +
Sbjct: 96 RSGPTEPYDGTPPPAPPRPKRDMYTN-------AQATWDALRSTPSSKTASQSAGQPSAG 148
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
D ++FL A+ +Y I+ + + + + ++
Sbjct: 149 ATPD---EEFLAGAKMAYGRILADIAKRDFDDLAGFTTPDFLANLKN----------SLP 195
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
S D+ ++ A++ E+ G D L+ D D W FV
Sbjct: 196 LSPPPAPDVLLVEATLAEHREQ------GSQTVMVVDYKVLIHEKDAPHNTDRFDRWRFV 249
Query: 214 RNIPPSNPNWVLISTKL 230
R+ NW+L + +
Sbjct: 250 RDNATPGANWLLDAMEQ 266
>gi|241766060|ref|ZP_04763976.1| import inner membrane translocase subunit Tim44 [Acidovorax
delafieldii 2AN]
gi|241363941|gb|EER59229.1| import inner membrane translocase subunit Tim44 [Acidovorax
delafieldii 2AN]
Length = 235
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/187 (6%), Positives = 55/187 (29%), Gaps = 15/187 (8%)
Query: 47 GKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMR--DIVSVYTDFDPKDFL 104
+ + + D+ + G + + + FD + FL
Sbjct: 59 PRQYSPDKVGNDASARPWERSSMAFDAARQPQGSGVVIGSGLAGSQNWGIPAGFDAEGFL 118
Query: 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS-NEKNVKSSLVGIDDMK 163
+ A+ ++ + ++ + + ++ + + L+ R+S + V + + +
Sbjct: 119 SAAKRNFVTLQAAWDRSDIATLRSMMTDSMLDEIRTQLTERESHRGDQPNHTDVVMIEAQ 178
Query: 164 IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
++ ++ ++ ++ ++W + W
Sbjct: 179 LLGIEELDDGYMASVEFS-----------GMIREELSAGPSPFREVWNMTKP-KTGTSGW 226
Query: 224 VLISTKL 230
++ +
Sbjct: 227 LVAGVQA 233
>gi|26992029|ref|NP_747454.1| hypothetical protein PP_5353 [Pseudomonas putida KT2440]
gi|24987165|gb|AAN70918.1|AE016736_1 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 284
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 69/222 (31%), Gaps = 34/222 (15%)
Query: 11 FLILLFAFIT--FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F I+ F + F+ + F + + + ++
Sbjct: 93 FQIMDFLIVALIAFLVFR-----------------FIAARRRQQQPQMAMPGHAPMQREA 135
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ +F +++ F+ + FL ARN ++++ + ++ I +
Sbjct: 136 HAQPAQPSIFGGSAAPAATAAPVINAPAWFNEQSFLAAARNHFQSLQQHWDANEMDKISE 195
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ + R +S+ + ++++ + T+ G ++
Sbjct: 196 FVTPQMLEFLKR---ERAELGDGFQSTYIDNLEVQLDGVDDRADRTDATLTFRGVSKNSR 252
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D + S W VR + P W++ +
Sbjct: 253 FD-QGEVFSES----------WHMVRAQGENQP-WLVAGIRQ 282
>gi|119897609|ref|YP_932822.1| hypothetical protein azo1318 [Azoarcus sp. BH72]
gi|119670022|emb|CAL93935.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 304
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 53/136 (38%), Gaps = 15/136 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DFD + F+ +A+ ++ + S G + + + ++ + ++ R ++ + +
Sbjct: 184 DFDVQGFVRQAKVNFIRLQASHDAGNLDDLREFTTPEMFAELKTNILAR---GQSAQQTD 240
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V D +++ E + +++ G D+D ++ ++W V+
Sbjct: 241 VLEIDAEVVEVVEEGSRYIVSVLFRGLLR---EDRDAAP--------EQIHEVWHLVKP- 288
Query: 217 PPSNPNWVLISTKLGE 232
+ W L + +
Sbjct: 289 RDGSAGWKLAGIQQAQ 304
>gi|218530483|ref|YP_002421299.1| import inner membrane translocase subunit Tim44 [Methylobacterium
chloromethanicum CM4]
gi|218522786|gb|ACK83371.1| import inner membrane translocase subunit Tim44 [Methylobacterium
chloromethanicum CM4]
Length = 319
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V A+ +L + F + L + + S V + +
Sbjct: 197 QAFERSLQEIQSAYGREDVAALRRLATPEMVSYFEEDLRANAARGVVNRISDVKLLQGDL 256
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E + T+ + +++ + + + P + + WTFVR W
Sbjct: 257 SEAWREGPAEFATVAMRFSLRDEVFERASNRHVENGP---QEAKEFWTFVREPGGP---W 310
Query: 224 VLISTKLG 231
+L + + G
Sbjct: 311 LLSAIQQG 318
>gi|296446386|ref|ZP_06888331.1| import inner membrane translocase subunit Tim44 [Methylosinus
trichosporium OB3b]
gi|296256159|gb|EFH03241.1| import inner membrane translocase subunit Tim44 [Methylosinus
trichosporium OB3b]
Length = 325
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 8/127 (6%)
Query: 110 SYEAIV----DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165
++E ++ +++ V ++ L + F + L + + S V + +
Sbjct: 199 AFERLLGETQEAYSREDVARLDALTTPEMASYFAEDLKSNAREGVVNRISGVKLLQGDLA 258
Query: 166 NASIEENTVYITI--RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E Y T+ R ++ D + ++WTF R W
Sbjct: 259 EAWREGGDEYATVAMRF-SLVDQFVERATGRVVRGDA-TPTQSTEVWTFRRPAGRGPEAW 316
Query: 224 VLISTKL 230
L + +
Sbjct: 317 RLSAIQQ 323
>gi|39943280|ref|XP_361177.1| hypothetical protein MGG_03720 [Magnaporthe oryzae 70-15]
gi|145009682|gb|EDJ94338.1| hypothetical protein MGG_03720 [Magnaporthe oryzae 70-15]
Length = 302
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV--------- 157
A+ + ++ ++F G + + ++ +YQ + + R + L+
Sbjct: 142 AKELHRSLSEAFAAGDLDTLRRVCMPNLYQTLSAKVLQR-PAGIRRQWELITYTGTLMYP 200
Query: 158 GIDDMKIINASIEENT------VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWT 211
I D K++ + T +TIR + +DK I+ P+ V +
Sbjct: 201 RIADHKLMEIPRRDGTRATAHQAVVTIR--SRQRLTQFDKTGE-ITGQPKEL-DVTEHLI 256
Query: 212 FVRNIPPSNPN---WVLIS 227
+R + + P W +
Sbjct: 257 MLRELDSNAPTPGDWKVFG 275
>gi|66359344|ref|XP_626850.1| possible mitochondrial import inner membrane, translocase subunit
TIM44 [Cryptosporidium parvum Iowa II]
gi|46228138|gb|EAK89037.1| possible mitochondrial import inner membrane, translocase subunit
TIM44 [Cryptosporidium parvum Iowa II]
Length = 424
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA-----IVDSFFEGKVHAIEKLVDSRVY 135
G +++KV++++ ++ +F DF+ + +E ++S+ + H + Y
Sbjct: 251 GNKISKVVKEMKAINPNFKLTDFM----SFFEEYILPKFMESYLKCDEHKLRLHCGDVAY 306
Query: 136 QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE------------NTVYITIRIVGQ 183
+ ++ K + + ++ + ++++I A I + N Q
Sbjct: 307 RQLCSNIEKLKKMGLCLNTKILQLGNVELIGAEISDLMFSFKDCKIQTNQPEFMFTFKTQ 366
Query: 184 FISASYDKDNLLISSDPEIFGK 205
I+ D + +IS + +
Sbjct: 367 QINCLQDSNGRIISGSIDDIKE 388
>gi|294953191|ref|XP_002787640.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902664|gb|EER19436.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 794
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T + + +R++ V +F + + I+ + EG V +E + N
Sbjct: 644 TEIAQSIREMKEVDPNFRLSQMAEDIEHVVAPRIIRWYLEGDVERLEAHCGEAAFAAVNA 703
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR-------IVGQFISASYDKDN 193
S+ R + + + ++++ ++ ++ + Q I+ ++
Sbjct: 704 SVKARHTQKLTLDTNILQPP----MDVELKGAKTASEVDSPCFIFTFSTQQINCLRNEFG 759
Query: 194 LLISSDPEIFGKV 206
++ + +V
Sbjct: 760 EVVEGAVDDIRRV 772
>gi|163851677|ref|YP_001639720.1| import inner membrane translocase subunit Tim44 [Methylobacterium
extorquens PA1]
gi|163663282|gb|ABY30649.1| import inner membrane translocase subunit Tim44 [Methylobacterium
extorquens PA1]
Length = 319
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V A+ +L + F + L + + S V + +
Sbjct: 197 QAFERSLQEIQSAYGREDVAALRRLATPEMVSYFEEDLRANAARGVVNRISDVKLLQGDL 256
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E + T+ + +++ + + + P + + WTFVR W
Sbjct: 257 SEAWREGPAEFATVAMRFSLRDEVFERASNRHVENGP---QEAKEFWTFVREPGGP---W 310
Query: 224 VLISTKLG 231
+L + + G
Sbjct: 311 LLSAIQQG 318
>gi|12847837|dbj|BAB27727.1| unnamed protein product [Mus musculus]
Length = 284
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 53/148 (35%), Gaps = 12/148 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R I +F KDF +A++ + + LV + D
Sbjct: 126 AIRKIREFEANFKTKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMV-----WD 180
Query: 147 SNEKNVKSSLV-GIDDMKIINASIEENT------VYITIRIVGQFISASYDKDNLLISSD 199
K V+ V ++ ++++ +T+R+ + A YD+ L+
Sbjct: 181 LKYKTVRWGFVESLEPAQVVHVRCSGLVNQSNMYGQVTVRLHTRQTLAIYDRFGRLMYGQ 240
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWVLIS 227
++ V++ F R++ +W + +
Sbjct: 241 EDVPKDVLEYVVFERHLMNPYGSWRMHA 268
>gi|207742308|ref|YP_002258700.1| hypothetical protein RSIPO_00492 [Ralstonia solanacearum IPO1609]
gi|206593696|emb|CAQ60623.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 351
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 69/250 (27%), Gaps = 53/250 (21%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L A + F V +R + G + P ++ D +
Sbjct: 121 LILIAIVAFVVMWIIRKLRGTR-----PQEPAYATGGPSLGGDREPYVPSPAAPAAQPAA 175
Query: 73 SINELFPIGTRLNK-VMRDIVSVY------------------------------TDFDPK 101
+ G+ N + DFD +
Sbjct: 176 PVAASTGTGSAGNASGLGAGAQTAAQAWSLGGPAAPVADAPAAAQVAQQPWGVPADFDTQ 235
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
FL A+ + + ++ ++ I + ++ + L+ R + + +V + +
Sbjct: 236 AFLRNAKVYFIRLQAAWDTANLNDIREFTTPEMFAEIKMDLADRGTAPNK--TDVVSV-E 292
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI-FGKVIDIWTFVRNIPPSN 220
+++ ++R G +I D ++W + S
Sbjct: 293 AELLGIETHPTEYLASVRFSG------------MIREDANAPAQPFAEVWNLTKPTQGSG 340
Query: 221 PNWVLISTKL 230
WVL +
Sbjct: 341 -GWVLAGIQQ 349
>gi|83746614|ref|ZP_00943664.1| Hypothetical protein RRSL_03792 [Ralstonia solanacearum UW551]
gi|83726748|gb|EAP73876.1| Hypothetical protein RRSL_03792 [Ralstonia solanacearum UW551]
Length = 348
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 69/250 (27%), Gaps = 53/250 (21%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L A + F V +R + G + P ++ D +
Sbjct: 118 LILIAIVAFVVMWIIRKLRGTR-----PQEPAYATGGPSLGGDREPYVPSPAAPAAQPAA 172
Query: 73 SINELFPIGTRLNK-VMRDIVSVY------------------------------TDFDPK 101
+ G+ N + DFD +
Sbjct: 173 PVAASTGTGSAGNASGLGAGAQTAAQAWSLGGPAAPVADAPAAAQVAQQPWGVPADFDTQ 232
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
FL A+ + + ++ ++ I + ++ + L+ R + + +V + +
Sbjct: 233 AFLRNAKVYFIRLQAAWDTANLNDIREFTTPEMFAEIKMDLADRGTAPNK--TDVVSV-E 289
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI-FGKVIDIWTFVRNIPPSN 220
+++ ++R G +I D ++W + S
Sbjct: 290 AELLGIETHPTEYLASVRFSG------------MIREDANAPAQPFAEVWNLTKPTQGSG 337
Query: 221 PNWVLISTKL 230
WVL +
Sbjct: 338 -GWVLAGIQQ 346
>gi|319795430|ref|YP_004157070.1| import inner membrane translocase subunit tim44 [Variovorax
paradoxus EPS]
gi|315597893|gb|ADU38959.1| import inner membrane translocase subunit Tim44 [Variovorax
paradoxus EPS]
Length = 341
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 71/247 (28%), Gaps = 39/247 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVL-----GKKTGNEKPFSGFFSGKYVFSKRDERGIITLGK 64
+L+FA + + + R G+ + S ++ +
Sbjct: 106 LIGLLIFAALAVWRIFKARSAASNGTNGQGGFAFQGAGASPSNASAPAQYSPNNVGNDAS 165
Query: 65 GKKKDNLDSINELFPIGTR-------------------LNKVMRDIVSVYTDFDPKDFLN 105
+ + + + P + T FD FL
Sbjct: 166 ARPWERSATAFDATPADGDRHGSSLSAAGAAAGGSMIGSALGGSQSWGIPTGFDVDGFLG 225
Query: 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN--EKNVKSSLVGIDDMK 163
A+ ++ + D++ V + ++ + ++ L+ R S+ + K+ +V + D K
Sbjct: 226 AAKRNFVTLQDAWDRADVSMLRSMMTDEMVEEIRTQLADRASHTGGASNKTEVVML-DAK 284
Query: 164 IINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
++ + ++ ++ G ++W + W
Sbjct: 285 LLGIEELPDAYMASVEFS-----------GMIREDASAGPGPFREVWNMTKP-TSGGGGW 332
Query: 224 VLISTKL 230
++ +
Sbjct: 333 LVAGVQA 339
>gi|255074829|ref|XP_002501089.1| predicted protein [Micromonas sp. RCC299]
gi|226516352|gb|ACO62347.1| predicted protein [Micromonas sp. RCC299]
Length = 1195
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFP----IGTRLNKVMRDI------ 91
+G K + + + + + + + P I + + + +R
Sbjct: 940 AGPSEKKGDDAAGEGDDVKVDAHPAEPEAKSEVTVMRPSMWIIPSLMYRALRARLDMWWV 999
Query: 92 -VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
V V FD ++FL A ++E ++ +F + A+ ++ R F D+
Sbjct: 1000 RVMVDPHFDEREFLTGAIGAHEVVLKNFAANDMRALGAMLTDRALAAFRDA 1050
>gi|167835465|ref|ZP_02462348.1| hypothetical protein Bpse38_03171 [Burkholderia thailandensis
MSMB43]
Length = 134
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 47/134 (35%), Gaps = 17/134 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
FD + FL A+ + + ++ EG + I + ++ + L R + ++ +
Sbjct: 14 GFDTEAFLRNAKVYFVRLQAAWDEGNLADIREFTTPEMFAEVKIDLDGRGAGAN--QTDV 71
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V + D +++ + + ++R G + ++W +
Sbjct: 72 VQL-DAELLAVEDRGDEHFASVRFHG----LIRETQGAAAE-------PFNEVWNLSK-- 117
Query: 217 PPSNPNWVLISTKL 230
+ W+L +
Sbjct: 118 -AGSQGWLLAGIQQ 130
>gi|294899174|ref|XP_002776521.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239883553|gb|EER08337.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 604
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYE-AIVDSFFEGKVHAIEKLVDSRVYQDFND 140
T + + +R++ V +F + + I+ + EG V +E + N
Sbjct: 454 TEIAQSIREMKEVDPNFRLSQMAEDIEHVVAPRIIRWYLEGDVERLEAHCGEAAFAAVNA 513
Query: 141 SLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIR-------IVGQFISASYDKDN 193
S+ R + + + ++++ ++ ++ + Q I+ ++
Sbjct: 514 SVKARHTQKLTLDTNILQPP----MDVELKGAKTASEVDSPCFIFTFSTQQINCLRNEFG 569
Query: 194 LLISSDPEIFGKV 206
++ + +V
Sbjct: 570 EVVEGAVDDIRRV 582
>gi|46205477|ref|ZP_00048494.2| hypothetical protein Magn03001526 [Magnetospirillum magnetotacticum
MS-1]
Length = 147
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I ++ V ++ +L + F + L + + S V + +
Sbjct: 25 QAFERSLTEIQGAYGREDVASLRRLATPEMVGYFEEELRANAARGVVNRISDVKLLQGDL 84
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E + T+ + +++ + + + P + + WTFVR W
Sbjct: 85 SEAWREGPVEFATVAMRFSLRDEVFERASNRHVENGP---QEAKEFWTFVREPGGP---W 138
Query: 224 VLISTKLG 231
+L + + G
Sbjct: 139 LLSAIQQG 146
>gi|240138844|ref|YP_002963319.1| hypothetical protein MexAM1_META1p2250 [Methylobacterium extorquens
AM1]
gi|240008816|gb|ACS40042.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 324
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 61/225 (27%), Gaps = 27/225 (12%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFS-GKYVFSKRDERGIITLGKGKK 67
++ F + F + ++ + +G + + G
Sbjct: 124 FQIGLIAFLVMMAVRFFR------RRQEGQPAMAGNAPHARSGLPPQGGMNSGVNPMGGG 177
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ D + I ++ V A+
Sbjct: 178 LGAGGLGGARPQPVQPVQVQPDDFQAFERSLQE-------------IQSAYGREDVAALR 224
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+L + F + L + + S V + + A E + T+ +
Sbjct: 225 RLATPEMVSYFEEDLRANAARGVVNRISDVKLLQGDLSEAWREGPAEFATVAMRFSLRDE 284
Query: 188 SYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKLG 231
+++ + + + P + + WTFVR W+L + + G
Sbjct: 285 VFERASNRHVENGP---QEAKEFWTFVREPGGP---WLLSAIQQG 323
>gi|148550461|ref|YP_001270563.1| import inner membrane translocase subunit Tim44 [Pseudomonas putida
F1]
gi|148514519|gb|ABQ81379.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
putida F1]
Length = 297
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 69/222 (31%), Gaps = 34/222 (15%)
Query: 11 FLILLFAFIT--FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F I+ F + F+ + F + + + ++
Sbjct: 106 FQIMDFLIVALIAFLVFR-----------------FIAARRRQQQPQMAMPGHAPMQREA 148
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ +F +++ F+ + FL ARN ++++ + ++ I +
Sbjct: 149 HAQPAQPSIFGGSAAPAAAAAPVINAPAWFNEQSFLAAARNHFQSLQQHWDANEMDKISE 208
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ + R +S+ + ++++ + T+ G ++
Sbjct: 209 FVTPQMLEFLKR---ERAELGDGFQSTYIDNLEVQLDGVEDRADRTDATLTFRGVSKNSR 265
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D + S W VR + P W++ +
Sbjct: 266 FD-QGEVFSES----------WHMVRAQGENQP-WLVAGIRQ 295
>gi|148690046|gb|EDL21993.1| translocase of inner mitochondrial membrane 44, isoform CRA_b [Mus
musculus]
Length = 222
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 33/174 (18%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEAR-NSYEA 113
+ ++ D + + T +++V+ +I+ V FD FL++ +
Sbjct: 67 ESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDHFLHQCETDIIPN 126
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
I+++ G++ ++ Y+ + K ++ V I
Sbjct: 127 ILEAMISGELDILKDWC----YEAL--------AMGKMMEQGPVLI-------------- 160
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNP--NWVL 225
+ Q + + + DP+ +++ +W R+ NP W L
Sbjct: 161 ----VTFQAQVVMVIKNSKGEVYDGDPDKVQRMLYVWALCRDQEELNPYAAWRL 210
>gi|47077699|dbj|BAD18730.1| unnamed protein product [Homo sapiens]
Length = 306
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 122 IRRIKDYDANFKIKDFPGKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK---- 177
Query: 148 NEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S V + ++ + + N IT+R+ + A YD+ L+
Sbjct: 178 -YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQE 236
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 237 DVPKDVLEYVVFEKQLTNPYGSWR 260
>gi|254571313|ref|XP_002492766.1| Peripheral mitochondrial membrane protein involved in mitochondrial
protein import [Pichia pastoris GS115]
gi|238032564|emb|CAY70587.1| Peripheral mitochondrial membrane protein involved in mitochondrial
protein import [Pichia pastoris GS115]
gi|328353226|emb|CCA39624.1| Mitochondrial import inner membrane translocase subunit TIM44
[Pichia pastoris CBS 7435]
Length = 408
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 45/130 (34%), Gaps = 10/130 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIV----DSFFEGKVHAIEKLVDSRVYQD 137
T KV+R + F+ ++F + R E I+ +++ +G ++ + +
Sbjct: 245 TESAKVIRMFKEIDPSFNTENFNKQLR---EFIIPEVLEAYVQGDEAVLKTWLSEAPFNV 301
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA---SYDKDNL 194
F+ K ++ I + +++A + + I + K
Sbjct: 302 FHAQQKQFKEQGLFSDGRILDIRGVDVLSAKVIPGNNSPALVIGARVQEVNVYRKAKTGE 361
Query: 195 LISSDPEIFG 204
+ + P+
Sbjct: 362 IAAGSPDNIN 371
>gi|124267379|ref|YP_001021383.1| hypothetical protein Mpe_A2192 [Methylibium petroleiphilum PM1]
gi|124260154|gb|ABM95148.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 311
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/192 (10%), Positives = 57/192 (29%), Gaps = 20/192 (10%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDF 98
+P +++ + + PI ++ ++ DF
Sbjct: 138 RPALAGAGAGGHGGATQPAWPAPAEPLQRRVEPSPVAAVPPIA-----MVSTGGALPADF 192
Query: 99 DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVG 158
D F A+ + + + ++ + ++ L R + + + V
Sbjct: 193 DAAGFERLAKQIFIRLQAANDTADLNDLRAFTTPELFASLRLDLQER---GETSQQTDVL 249
Query: 159 IDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP 218
D ++++ + E+ +++R L+ ++W V+
Sbjct: 250 KIDAEVLDLAREDGRQVVSVRF-----------HGLVRELSDAAATDFDEVWHLVKPDDD 298
Query: 219 SNPNWVLISTKL 230
S P W + +
Sbjct: 299 SRP-WAIAGIEQ 309
>gi|120612288|ref|YP_971966.1| import inner membrane translocase subunit Tim44 [Acidovorax
citrulli AAC00-1]
gi|120590752|gb|ABM34192.1| import inner membrane translocase, subunit Tim44 [Acidovorax
citrulli AAC00-1]
Length = 343
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/203 (7%), Positives = 58/203 (28%), Gaps = 18/203 (8%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMR--D 90
+ G+ P +Y + S G + +
Sbjct: 152 QGAGSASPSDAAVPRQYSPQNVGNDASARPFERSGMAFDASRTGGAGSGVVIGSGLSGSQ 211
Query: 91 IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS-NE 149
+ DFD + FL+ A+ ++ + ++ + + ++ + + L R++
Sbjct: 212 NWGIPADFDTQGFLDAAKRNFVTLQAAWDRSDIATLRSMMTDSMVDEIRAQLGEREALRG 271
Query: 150 KNV--KSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
+ + +V + + +++ + ++ ++
Sbjct: 272 ASQPNHTDVVML-EAQLLGIEDLGDGYMASVEFS-----------GMIREELSAGPSPFR 319
Query: 208 DIWTFVRNIPPSNPNWVLISTKL 230
++W + W++ +
Sbjct: 320 EVWNMTKP-KSGTSGWLVAGVQA 341
>gi|325273940|ref|ZP_08140103.1| hypothetical protein G1E_12467 [Pseudomonas sp. TJI-51]
gi|324100911|gb|EGB98594.1| hypothetical protein G1E_12467 [Pseudomonas sp. TJI-51]
Length = 282
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 36/222 (16%)
Query: 11 FLILLFAFIT--FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F I+ F + F+ + F + + +
Sbjct: 93 FQIMDFLIVALIAFLVFR--------------FIAARRRQQQPQMAMPGHAPMQREAHGQ 138
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
S+ G +++ F+ + FL ARN ++++ + ++ I +
Sbjct: 139 PAQPSV-----FGGSAAPAAAPVINAPAWFNEQSFLAAARNHFQSLQQHWDANEMDKIAE 193
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ + R +S+ + ++++ + T+ G ++
Sbjct: 194 FVTPQMLEFLKR---ERAELGDGFQSTYIDNLEVQLDGVDDRPDRTDATLTFRGVSKNSR 250
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D L S W VR + + P W++ +
Sbjct: 251 LD-QGELFSES----------WHMVRALGENQP-WLVAGIRQ 280
>gi|52842829|ref|YP_096628.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52629940|gb|AAU28681.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 270
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 76/222 (34%), Gaps = 44/222 (19%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G L+ + FF+ LR + + F T ++
Sbjct: 88 GLITWLILGSVIFFIISFLR----------RKMNPGFQA-------------TQSGAFRQ 124
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ + + + N T FD +FL +A+ ++ + ++ + + ++
Sbjct: 125 NSFEQFTQNY---GNRNSGGAHFAQQETSFDADNFLRDAKITFIRLQAAYDQKNLQDLQT 181
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V+ + L R ++ ++ + D K+++ S + ++ +++ G +
Sbjct: 182 FTVPEVFAEIKMQLDERGDAPN--QTEVISL-DAKLLDVSKQSLSMIASVQFTG-----T 233
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ + + +IW F R WV+ +
Sbjct: 234 IKENGEI--------SNLDEIWHF-RQFDNRK-EWVVGGIQQ 265
>gi|328872019|gb|EGG20389.1| hypothetical protein DFA_07513 [Dictyostelium fasciculatum]
Length = 310
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 15/215 (6%)
Query: 28 RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKV 87
V+ +K G + + + + +T +D+I + + +
Sbjct: 91 YTVMRQKVGRTMKPNIYIQSPGQIFEPNLPVPLTKILVTPSSWIDTIRFYYRTYGSIGVI 150
Query: 88 MRDIVSVYTD-FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFN-----DS 141
+ ++ D F K F+ +A+ + + + +++L Y D
Sbjct: 151 KSKLKALTQDQFAVKSFVEQAKEIFINLNKAIANSDTDEVKELATIHYYSILAKNTQFDK 210
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTV--------YITIRIVGQFISASYDKDN 193
+ +K+N K+ + + M I A T I + G+ D
Sbjct: 211 VDGKKNNVKSEWTCELDKPKMLWIRAGQIRTTAAGGMEYFGQICVEFSGKQSLTRTDTKK 270
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
+I S + + D++ F R + +W + T
Sbjct: 271 NIIISQVKDA-EFKDVYVFERCLSSLPSSWRVCQT 304
>gi|299131769|ref|ZP_07024964.1| import inner membrane translocase subunit Tim44 [Afipia sp. 1NLS2]
gi|298591906|gb|EFI52106.1| import inner membrane translocase subunit Tim44 [Afipia sp. 1NLS2]
Length = 315
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ +++ ++ + + + + L++ S K + V + + A E +T
Sbjct: 200 VQEAWSNEDMNRLHAIATPEMVSYMSQDLASNSSRGVINKVTNVKLLQGDLAEAWREGST 259
Query: 174 VYITIRIVGQFISASYDKD-NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
Y T+ + + + ++ +I + +V +IWTFVR W L + +
Sbjct: 260 DYATVAMHFSLVDKTMERSSGRMIEGS-DTPQEVTEIWTFVRRPGAD---WELSAIQQ 313
>gi|193848536|gb|ACF22724.1| mitochondrial inner membrane protein [Brachypodium distachyon]
Length = 226
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F DF+ + + + ++ ++ +G ++K + + S+ ++
Sbjct: 111 RTFSLPDFVADIEEAIKPVLIAYSKGDTEMLKKYCNKEFIERCEGERQAYASHNLFFRNK 170
Query: 156 LVGIDDMKIINASIEENTVYITI----RIVGQFISASYDKDNLLISS 198
++ I + +I A + +T I + Q I +++D +
Sbjct: 171 VLHISEPHVIEAKMLGSTPLIILGVNAPFQTQQIHCVHNRDGQITHG 217
>gi|145498986|ref|XP_001435479.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402612|emb|CAK68082.1| unnamed protein product [Paramecium tetraurelia]
Length = 405
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+ + + ++ + + DFD + EA+ +E I + + G + +++K+ F
Sbjct: 240 SDVARAIKQMRMIDPDFDLYELEKEAKVIFEQIYNLYLLGDLESLQKVCGEAALGYFKVL 299
Query: 142 LSTRKSNE-KNVKSSLVGIDDMKIINASIEENTVY----ITIRIVGQFISASYDKDNLLI 196
L +++ + + L +D+++ ASI ++ TI+ F S + +I
Sbjct: 300 LKKQEAEKSEPKHKQLWNVDEIRFTRASIPDSVKLPVFIFTIKTQEIFCYVSKSDRSKII 359
Query: 197 SSDPEIF 203
D E
Sbjct: 360 DGDDERI 366
>gi|257095873|ref|YP_003169514.1| import inner membrane translocase subunit Tim44 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257048397|gb|ACV37585.1| import inner membrane translocase subunit Tim44 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 303
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 53/174 (30%), Gaps = 19/174 (10%)
Query: 61 TLGKGKKKDNLDSINELFPIGTRLNKVMRD----IVSVYTDFDPKDFLNEARNSYEAIVD 116
D + L G ++ I +V DFD FL A+ ++ +
Sbjct: 141 PGMAPPPFDPRPASAGLAAHGDDSPAALQPSGAPIANVPADFDSDGFLRIAKLNFIRLQA 200
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+ G + I + V ++ + R ++ +V ++ +++ E
Sbjct: 201 ANDAGNLDDIREFVSPELFAEIRMQFEERAKA--PQQTDVVTLN-AQLLEVVTEVTRHIA 257
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++R ++ ++W + + WV+ +
Sbjct: 258 SVRFS-----------GMIREEAGAAAAPFDEVWNLSKPVE-GGKGWVVAGIQQ 299
>gi|301762886|ref|XP_002916855.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 324
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + + LV + D ++
Sbjct: 145 IRKIREHDPNFKIKDFPEKAKDIFIEAHLCLNNSDHNRLHTLVTENCFPDMVWDIT---- 200
Query: 148 NEKNVKSSLV-GIDDMKIINAS-----IEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S + ++ +++ + N +T+R+ + A YD+ L+
Sbjct: 201 -YKTVRWSFIESLEPPQVVQVRCSSMLSQGNIYGQVTVRMHTRQTLAIYDRFGRLMYGQE 259
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 260 DVPKDVLEYVVFEKHLVNPYGSWR 283
>gi|281344359|gb|EFB19943.1| hypothetical protein PANDA_004986 [Ailuropoda melanoleuca]
Length = 276
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 56/144 (38%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + + LV + D ++
Sbjct: 101 IRKIREHDPNFKIKDFPEKAKDIFIEAHLCLNNSDHNRLHTLVTENCFPDMVWDIT---- 156
Query: 148 NEKNVKSSLV-GIDDMKIINAS-----IEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S + ++ +++ + N +T+R+ + A YD+ L+
Sbjct: 157 -YKTVRWSFIESLEPPQVVQVRCSSMLSQGNIYGQVTVRMHTRQTLAIYDRFGRLMYGQE 215
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 216 DVPKDVLEYVVFEKHLVNPYGSWR 239
>gi|207727902|ref|YP_002256296.1| hypothetical protein RSMK04298 [Ralstonia solanacearum MolK2]
gi|206591144|emb|CAQ56756.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 351
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 69/250 (27%), Gaps = 53/250 (21%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLD 72
++L A + F V +R + G + P ++ D +
Sbjct: 121 LILIAIVAFVVMWVIRKLRGTR-----PQEPAYATGGPSLGGDREPYVPSPAAPAAQPAA 175
Query: 73 SINELFPIGTRLNK-VMRDIVSVY------------------------------TDFDPK 101
+ G+ N + DFD +
Sbjct: 176 PVAASTGTGSAGNASGLGAGAQTAAQAWSLGGPAAPVADAPAAAPVAQQPWGVPADFDTQ 235
Query: 102 DFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD 161
FL A+ + + ++ ++ I + ++ + L+ R + + +V + +
Sbjct: 236 AFLRNAKVYFIRLQAAWDTANLNDIREFTTPEMFAEIKMDLADRGTAPNK--TDVVSV-E 292
Query: 162 MKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI-FGKVIDIWTFVRNIPPSN 220
+++ ++R G +I D ++W + S
Sbjct: 293 AELLGIETHPTEYLASVRFSG------------MIREDANAPAQPFAEVWNLTKPTQGSG 340
Query: 221 PNWVLISTKL 230
WVL +
Sbjct: 341 -GWVLAGIQQ 349
>gi|254561446|ref|YP_003068541.1| hypothetical protein METDI3032 [Methylobacterium extorquens DM4]
gi|254268724|emb|CAX24685.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 319
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 11/128 (8%)
Query: 109 NSYE----AIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I + V A+ +L + F + L + + S V + +
Sbjct: 197 QAFERSLQEIQSGYGREDVAALRRLATPEMVSYFEEDLRANAARGVVNRISDVKLLQGDL 256
Query: 165 INASIEENTVYITIRIVGQFISASYDKDNLL-ISSDPEIFGKVIDIWTFVRNIPPSNPNW 223
A E + T+ + +++ + + + P + + WTFVR W
Sbjct: 257 SEAWREGPAEFATVAMRFSLRDEVFERASNRHVENGP---QEAKEFWTFVREPGGP---W 310
Query: 224 VLISTKLG 231
+L + + G
Sbjct: 311 LLSAIQQG 318
>gi|126308283|ref|XP_001372116.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 310
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 12/157 (7%)
Query: 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
E G +R + DF K F +A+ + + LV R
Sbjct: 109 TEKLKQGVASQLAIRKVREYDADFRTKTFPEKAQQIFVEAHQCLNTSDHDRLHALVTERC 168
Query: 135 YQDFNDSLSTRKSNEKNVKSSLV-GIDDMKIINAS-----IEENT-VYITIRIVGQFISA 187
+ + + K V + V ++ ++++ E N +T+R+ + A
Sbjct: 169 FPEMVWDI-----QLKTVHWNFVESLEPPRVVHVRCPNMVSEGNIYGQVTVRMHTRQTLA 223
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
YD+ L+ ++ V++ F R++ W
Sbjct: 224 IYDRFGRLMYGQEDVPKDVLEYVVFERHLTNPYGAWR 260
>gi|316966353|gb|EFV50945.1| zinc finger protein [Trichinella spiralis]
Length = 763
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 21/200 (10%)
Query: 37 NEKPFSGFFSG---KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
E+P SG +E + L KGK +DS ++ R ++ + I S
Sbjct: 529 RERPIHISSSGTIFDEFVPDENENKVSLLVKGKGSRLVDSSKHVW----RNSRAGKKIRS 584
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN-V 152
DFDP F++EA Y + + +LV Y + +
Sbjct: 585 YDADFDPVIFIDEALKIYLDAHSALQNRDSDRLHELVTEYAYP------EMWEELNLKSL 638
Query: 153 KSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDPEIFGK 205
+ V + M+ + E+N +T+R+ + A YD+ L + +
Sbjct: 639 RWQFVESVEPARVVQMRTSSVMQEDNIFAQVTVRMHTKQKLAIYDQFGRLYMGNETVPRD 698
Query: 206 VIDIWTFVRNIPPSNPNWVL 225
V++ + +++ W L
Sbjct: 699 VLEYIVYEKHLSNLYGKWRL 718
>gi|156056531|ref|XP_001594189.1| hypothetical protein SS1G_03996 [Sclerotinia sclerotiorum 1980]
gi|154701782|gb|EDO01521.1| hypothetical protein SS1G_03996 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 266
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 9/104 (8%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL--------VG 158
A Y + +F G + ++ +Y+ F +++R + V +L +
Sbjct: 123 AEALYREMYQNFAAGNTGRLRRMCTDGLYESFAQRIASR-PRGQKVTWNLEKMNRRPKIM 181
Query: 159 IDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEI 202
+ +I +RI + + D + E
Sbjct: 182 SNKAVMIPGGSGNVIRQAVVRISSRQLITLKDSKGKELPGSSEK 225
>gi|195572942|ref|XP_002104454.1| GD20969 [Drosophila simulans]
gi|194200381|gb|EDX13957.1| GD20969 [Drosophila simulans]
Length = 335
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 51/137 (37%), Gaps = 22/137 (16%)
Query: 106 EARNSYEAI------VDS----FFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
A+ +E + + + + I + V R Y + ++ K ++
Sbjct: 135 GAKQKFEFLEKKSKSLMAAHTHMAAKDKYKIREFVSERCYPEMMHNVKD-----KTIRWK 189
Query: 156 LV-GIDDMKIINASI------EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVID 208
+ ++ ++++A + E +T+R Q + A YD+ L+ I V++
Sbjct: 190 FLQSLEPPRVVHARVTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLMHGSEIITKDVLE 249
Query: 209 IWTFVRNIPPSNPNWVL 225
F ++I W L
Sbjct: 250 YVVFEKHISNEYGKWRL 266
>gi|315042568|ref|XP_003170660.1| mitochondrial inner membrane translocase subunit TIM44 [Arthroderma
gypseum CBS 118893]
gi|311344449|gb|EFR03652.1| mitochondrial inner membrane translocase subunit TIM44 [Arthroderma
gypseum CBS 118893]
Length = 540
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 376 AENETAMVIKAFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 434
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASY-DKD 192
+ K+ ++ I + I +A + + IT R Q + +K
Sbjct: 435 YAALTKQYKTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--SQEVHVYRKEKT 492
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 493 GELAAGMEDKVQLVT 507
>gi|296202660|ref|XP_002748546.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like
[Callithrix jacchus]
Length = 329
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 18/205 (8%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK------ 86
+K G P ++ +G + + S L R+ K
Sbjct: 84 RKAGVVIPPERLERPIHLACSAGIFDAYVPPEGDARISFLSREGLKQKTERMKKTMASQV 143
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+R I F KDF +A++ + + LV + D +
Sbjct: 144 AIRKIKEHDASFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIKC-- 201
Query: 147 SNEKNVKSSLV-GIDDMKIINA---SIEENT---VYITIRIVGQFISASYDKDNLLISSD 199
K V+ S V ++ ++ S+ + +T+R+ + A YD+ L+
Sbjct: 202 ---KTVRWSFVESLEPSHVVQVRCSSMVNESNMYGQVTVRMHTRQTLAIYDRFGRLMYGQ 258
Query: 200 PEIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 259 EDVPKDVLEYVVFEKQLVNPYGSWR 283
>gi|319761670|ref|YP_004125607.1| import inner membrane translocase subunit tim44 [Alicycliphilus
denitrificans BC]
gi|330823541|ref|YP_004386844.1| import inner membrane translocase subunit Tim44 [Alicycliphilus
denitrificans K601]
gi|317116231|gb|ADU98719.1| import inner membrane translocase subunit Tim44 [Alicycliphilus
denitrificans BC]
gi|329308913|gb|AEB83328.1| import inner membrane translocase subunit Tim44 [Alicycliphilus
denitrificans K601]
Length = 332
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/228 (8%), Positives = 68/228 (29%), Gaps = 31/228 (13%)
Query: 19 ITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINEL- 77
+ + + +R ++ + + F+ + + K D+
Sbjct: 118 VMVVIGMVMRS---RRPAASQEGAAPFAFQGAGAATPAEAQAPRQYSPDKVGNDASARPW 174
Query: 78 --------FPI---GTRLNKVMR--DIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVH 124
P G+ + + V DFD FL A+ ++ + ++ +
Sbjct: 175 ESTGMAYQAPATGGGSMIGSALAGSQNWGVPADFDVAGFLAAAKRNFTTLQAAWDRSDIA 234
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSN--EKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ ++ + + LS R+S+ + + V + + +++ + ++
Sbjct: 235 TLRSMMTDGMVDEIRAQLSERESHRGGEQPNHTDVVMLEAQLLGIEDLGDGYMASVEFS- 293
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ ++W + + W++ +
Sbjct: 294 ----------GMIREEPSAGPSPFREVWNMTKP-KNGSVGWLVAGVQA 330
>gi|326482394|gb|EGE06404.1| mitochondrial inner membrane translocase subunit TIM44
[Trichophyton equinum CBS 127.97]
Length = 543
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 379 AENETAMVIKAFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 437
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASY-DKD 192
+ K+ ++ I + I +A + + IT R Q + +K
Sbjct: 438 YAALTKQYKTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--SQEVHVYRKEKT 495
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 496 GELAAGMEDKVQLVT 510
>gi|167036388|ref|YP_001671619.1| import inner membrane translocase subunit Tim44 [Pseudomonas putida
GB-1]
gi|166862876|gb|ABZ01284.1| import inner membrane translocase subunit Tim44 [Pseudomonas putida
GB-1]
Length = 284
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/222 (10%), Positives = 70/222 (31%), Gaps = 34/222 (15%)
Query: 11 FLILLFAFIT--FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
F I+ F + F+ + F + + + ++
Sbjct: 93 FQIMDFLIVALIAFLVFR-----------------FIAARRRQQQPQMAMPGHAPMQREA 135
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ +F +++ F+ ++FL ARN ++++ + ++ I +
Sbjct: 136 HAQPAQPSIFGGSAAPAAAAAPVINAPAWFNEQNFLAAARNHFQSLQQHWDANEMDKIAE 195
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ + R +++ + ++++ + T+ G ++
Sbjct: 196 FVTPQMLEFLKR---ERAELGDGFQATYIDNLEVQLDGLDDRTDRTDATLTFRGVSKNSR 252
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D + S W VR + P W++ +
Sbjct: 253 FD-QGEVFSES----------WHMVRAQGENQP-WLVAGIRQ 282
>gi|56477136|ref|YP_158725.1| hypothetical protein ebA3013 [Aromatoleum aromaticum EbN1]
gi|56313179|emb|CAI07824.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 283
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/227 (11%), Positives = 68/227 (29%), Gaps = 38/227 (16%)
Query: 5 KMDSG-DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLG 63
+M S +L+FA + F +L ++ + G +
Sbjct: 92 EMGSLLMIALLVFAALMLF------RMLSRR----------------NAAARSGGAMQYA 129
Query: 64 KGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKV 123
N + + T+FD + F+ +A+ + + + G +
Sbjct: 130 GAPAGGNFPASAPTSFPAASSAAAPAPAGKIPTNFDAEAFVRQAKVQFIRLQAANDAGNL 189
Query: 124 HAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ 183
I + ++ + L+ R ++ +V ++ +++ E ++IR G
Sbjct: 190 EDIREFTSPEMFAEIRMQLTERGPG--TQRTDVVELN-GEVLEVVEEAQRYVVSIRFSGL 246
Query: 184 FISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ ++W + N WV+ +
Sbjct: 247 LR-----------EEEGAAPAAFDEVWHLTKP-STGNVGWVVAGIQQ 281
>gi|19112697|ref|NP_595905.1| TIM23 translocase complex subunit Tim44 [Schizosaccharomyces pombe
972h-]
gi|6016371|sp|O60084|TIM44_SCHPO RecName: Full=Mitochondrial import inner membrane translocase
subunit tim44; Flags: Precursor
gi|3006160|emb|CAA18420.1| TIM23 translocase complex subunit Tim44 [Schizosaccharomyces pombe]
Length = 427
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 14/184 (7%)
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
++ I D++ + T ++VMR + F+ + FL R E
Sbjct: 236 QESEHPIVSSIRDMADSISGVWSRMFSETEASQVMRRFKEIDPSFNTEHFLQYLR---EY 292
Query: 114 IV----DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
IV +++ +G ++ + + + + + ++ I + I++ +
Sbjct: 293 IVPEVTEAYVKGDKEVLKTWLSEAPFSVYETTTKEYAKHGVVSVGKILDIRGVDIMSQRL 352
Query: 170 E--ENTVYITIRIVGQFISASYDK-DNLLISSDPEIFGKVIDIWTFVRNIP-PSNPN--- 222
+ + Q + D L++ + + F R NP
Sbjct: 353 LQPNDIPVFIVTFRTQEVHMFKDASSGELVAGKDDRIQQCTYASVFTRVEDELDNPETRG 412
Query: 223 WVLI 226
W ++
Sbjct: 413 WRIV 416
>gi|83774116|dbj|BAE64241.1| unnamed protein product [Aspergillus oryzae]
Length = 518
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F ++FL E R Y ++D++ +G V ++ + +
Sbjct: 354 AENETAQVIKKFREMDPNFQMEEFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFSV 412
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ + ++++NA + + + Q + + K
Sbjct: 413 YAALAKQYTTAGLKSDGRILDVRGVEVMNARMLDPGDIPVFVVTCRSQEVHVYKNVKTGE 472
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 473 LAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 513
>gi|307107447|gb|EFN55690.1| expressed protein [Chlorella variabilis]
Length = 353
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 62/166 (37%), Gaps = 45/166 (27%)
Query: 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL-----VGID 160
A+++Y + E + ++ ++++ F D+++ K++ ++++ GI
Sbjct: 190 GAKDAYYIVHKLLEEEDWETLRSMMSAKLFAAFQDTVAAYKADGLVWRTAISQDLQAGIR 249
Query: 161 DMKI-----------INASIEENTV-----------YITIRIVGQF-ISASYDKDNLLIS 197
+ A++ + +T++++G+ ++ + +D +++
Sbjct: 250 GLAFATKQQMETYDPEQAALAPDDAGALARPAGMWLVLTVQLLGEQRVTITRQEDGQVVA 309
Query: 198 --------SDPEIFGKVIDIWTFVR-----NIPPS--NPNWVLIST 228
V W F R ++P + +W L+S
Sbjct: 310 ELRRAGVVGGVGDRRPVR--WKFARGPLPASLPADRLDADWFLLSI 353
>gi|50551255|ref|XP_503101.1| YALI0D21142p [Yarrowia lipolytica]
gi|49648969|emb|CAG81293.1| YALI0D21142p [Yarrowia lipolytica]
Length = 418
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/156 (10%), Positives = 50/156 (32%), Gaps = 12/156 (7%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQDFN 139
T KV+R + F+ F+ R Y +++++ G ++ + Y +
Sbjct: 255 TEAGKVIRMFKLMDPSFNQDQFMKTTRE-YIIPEVLEAWVTGDGETLKMWLSEAPYNIWA 313
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG----QFISASYDKDNLL 195
++ I + I++A + + + + ++ + K L
Sbjct: 314 TQTKQYTEQGLFADGKILDIRGVDIMSAKVLPPS-DVPVYVISCRAQEVHLYRKAKTGEL 372
Query: 196 ISSDPEIFGKVIDIWTFVR---NIPPSNP-NWVLIS 227
+ + + + R ++ W ++
Sbjct: 373 AAGTEDNIQQSTYVMVLTRVPEDMGNPETGGWKILE 408
>gi|54298612|ref|YP_124981.1| hypothetical protein lpp2676 [Legionella pneumophila str. Paris]
gi|148358642|ref|YP_001249849.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|296108268|ref|YP_003619969.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy]
gi|53752397|emb|CAH13829.1| hypothetical protein lpp2676 [Legionella pneumophila str. Paris]
gi|148280415|gb|ABQ54503.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|295650170|gb|ADG26017.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy]
Length = 270
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 75/222 (33%), Gaps = 44/222 (19%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G L+ + FFV LR + + F T ++
Sbjct: 88 GLITWLILGSVIFFVVSFLR----------RKMNPGFQA-------------TQSGAFRQ 124
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ + + + N T FD +FL +A+ ++ + ++ + + ++
Sbjct: 125 NSFEQFTQNY---GNRNSGGAHFAQQETSFDADNFLRDAKVTFIRLQAAYDQKNLQDLQT 181
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V+ + L R ++ ++ + D K+++ S + + +++ G +
Sbjct: 182 FTVPEVFAEIKMQLDERGDAPN--QTEVISL-DAKLLDVSKQSLSTIASVQFTG-----T 233
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ + + +IW F R WV+ +
Sbjct: 234 IKENGEI--------SNLDEIWHF-RQFDNRK-EWVVGGIQQ 265
>gi|310795797|gb|EFQ31258.1| Tim44-like domain-containing protein [Glomerella graminicola
M1.001]
Length = 532
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ ++ +F + FL E R Y ++D++ +G + ++ + Y
Sbjct: 368 AENETAQVIKKFRTMDPNFQTEPFLKELRE-YILPEVLDAYVKGDIETLKLWLSEAQYSV 426
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE----NTVYITIRIVGQFISASYD-KD 192
+ + ++ I + I+ A + + IT R Q + + K
Sbjct: 427 YEALTKQYLTAGLKSDGKILDIRHVDIVRARMLDPGEIPVFVITCR--TQEVHVYRNAKS 484
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 485 GELAAGMEDKVQLVT 499
>gi|85117796|ref|XP_965329.1| hypothetical protein NCU03229 [Neurospora crassa OR74A]
gi|28927136|gb|EAA36093.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|29290073|gb|AAO72335.1| mitochondrial inner membrane translocase subunit TIM44 [Neurospora
crassa]
Length = 526
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + + F+ ++FL E R Y +++++ +G V ++ + Y
Sbjct: 362 AENETAQVIKKLRELDPGFNMENFLMELRE-YILPEVLEAYVKGDVETLKLWLSEAQYSV 420
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASYD-KD 192
+ ++ I + ++ A + + IT R Q + + K
Sbjct: 421 YEALTKQYLQAGLKSDGRILDIRGVDVLKARMLEPGDIPVFVITCR--TQEVHVYKNAKT 478
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 479 GKLAAGMEDKVQLVT 493
>gi|326318355|ref|YP_004236027.1| import inner membrane translocase subunit Tim44 [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323375191|gb|ADX47460.1| import inner membrane translocase subunit Tim44 [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 341
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/137 (8%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS-NEKNV--K 153
DFD + FL+ A+ ++ + ++ + + ++ + + L R+S +
Sbjct: 216 DFDTQGFLDAAKRNFVTLQAAWDRSDIATLRSMMTDSMVDEIRSQLGERESLRGASQPNH 275
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ +V + + +++ + ++ ++ ++W
Sbjct: 276 TDVVML-EAQLLGIEDLGDGYMASVEFS-----------GMIREEPSAGPSPFREVWNMT 323
Query: 214 RNIPPSNPNWVLISTKL 230
+ W++ +
Sbjct: 324 KP-KSGTSGWLVAGVQA 339
>gi|116182526|ref|XP_001221112.1| hypothetical protein CHGG_01891 [Chaetomium globosum CBS 148.51]
gi|88186188|gb|EAQ93656.1| hypothetical protein CHGG_01891 [Chaetomium globosum CBS 148.51]
Length = 536
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + ++ F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 372 AENETAMVIKRLRAMDPAFKLEPFLQELRE-YILPEVLDAYVKGDVETLKLWLSEAQYSV 430
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ ++ I + I+ A + + I + IV Q + + K N
Sbjct: 431 YEALTKQYLQAGLKSDGKILDIRGVDILRARMLDP-GEIPVFIVTCRTQEVHVYRNAKSN 489
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 490 ELAAGMEDKVQLVT 503
>gi|317155790|ref|XP_001825374.2| TIM23 translocase complex subunit Tim44 [Aspergillus oryzae RIB40]
Length = 508
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F ++FL E R Y ++D++ +G V ++ + +
Sbjct: 344 AENETAQVIKKFREMDPNFQMEEFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFSV 402
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ + ++++NA + + + Q + + K
Sbjct: 403 YAALAKQYTTAGLKSDGRILDVRGVEVMNARMLDPGDIPVFVVTCRSQEVHVYKNVKTGE 462
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 463 LAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 503
>gi|302665278|ref|XP_003024251.1| hypothetical protein TRV_01602 [Trichophyton verrucosum HKI 0517]
gi|291188298|gb|EFE43640.1| hypothetical protein TRV_01602 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 379 AENETAMVIKAFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 437
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASY-DKD 192
++ K+ ++ I + I +A + + IT R Q + +K
Sbjct: 438 YSALTKQYKTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--SQEVHVYRKEKT 495
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 496 GELAAGMEDRVQLVT 510
>gi|198413804|ref|XP_002125945.1| PREDICTED: similar to Mitochondrial ribosomal protein L45 [Ciona
intestinalis]
Length = 400
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 21/153 (13%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYE-----------AIVDSFFEGKVHA-IEKLVDSRVYQ 136
R + +F K F EA++ Y IV + ++ LV Y
Sbjct: 132 RIVKKRVDNFHRKRFPAEAQDIYIKAHNLLNTPNWTIV---NQEDTEERLQNLVTEHAYT 188
Query: 137 DFNDSLSTRK---SNEKNVKS-SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
D L ++ ++++ +V I +I + +T+R + A YD+
Sbjct: 189 DMVKGLDSKTVIWKWNESLEPPRVVRIRASPMI--TNNNYYGQVTVRFHSKQTLAIYDRF 246
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
L+ P+ V++ F R+I W +
Sbjct: 247 GRLMYGSPDEARNVLEFVVFERHISHPYGCWRI 279
>gi|238498640|ref|XP_002380555.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus flavus NRRL3357]
gi|220693829|gb|EED50174.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus flavus NRRL3357]
Length = 508
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F ++FL E R Y ++D++ +G V ++ + +
Sbjct: 344 AENETAQVIKKFREMDPNFQMEEFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFSV 402
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ + ++++NA + + + Q + + K
Sbjct: 403 YAALAKQYTTAGLKSDGRILDVRGVEVMNARMLDPGDIPVFVVTCRSQEVHVYKNVKTGE 462
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 463 LAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 503
>gi|170724288|ref|YP_001751976.1| import inner membrane translocase subunit Tim44 [Pseudomonas putida
W619]
gi|169762291|gb|ACA75607.1| import inner membrane translocase subunit Tim44 [Pseudomonas putida
W619]
Length = 284
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 70/222 (31%), Gaps = 34/222 (15%)
Query: 11 FLILLFAFIT--FFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
I+ F + F+ + F + + + ++
Sbjct: 93 LQIMDFLIVALIAFLVFR-----------------FIAARRRQQQPQMAAPGHAPFQREA 135
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
+ +F +++ F+ + FL AR+ ++++ + ++ I +
Sbjct: 136 HGQPAQPSIFGGSAAPAAPAAPVINAPAWFNEQSFLAAARSHFQSLQQHWDANEMDKIAE 195
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V ++ + R +++ + D+++ + T+ G ++
Sbjct: 196 FVTPQMLEFLKR---ERADLGDGFQATYIDNLDVQLDGVDDRADRTDATLTFRGVSKTSR 252
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D+ +P + W VR + P W++ +
Sbjct: 253 FDQ------GEP-----FSESWHMVRAPGENQP-WLVAGIRQ 282
>gi|170746985|ref|YP_001753245.1| import inner membrane translocase subunit Tim44 [Methylobacterium
radiotolerans JCM 2831]
gi|170653507|gb|ACB22562.1| import inner membrane translocase subunit Tim44 [Methylobacterium
radiotolerans JCM 2831]
Length = 324
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 19/131 (14%)
Query: 109 NSYEA----IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
++E I D++ + L + F++ L + K S V + +
Sbjct: 202 QAFERLLGDIQDAYSREDRVTLGNLSTPEMVGYFDEELRGNAARGVVNKISDVKLLQGDL 261
Query: 165 INASIEENTVYITIRIVGQFISASYD-----KDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
A E+ T Y T+ A D ++S+D + ++WTF+R
Sbjct: 262 AEAWGEDRTDYATVA----MRYALKDVMIERSSGRVVSTDSS---EATELWTFLRQPGRG 314
Query: 220 NPNWVLISTKL 230
WVL + +
Sbjct: 315 ---WVLSAIQQ 322
>gi|145492102|ref|XP_001432049.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399158|emb|CAK64652.1| unnamed protein product [Paramecium tetraurelia]
Length = 405
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+ + + ++ + + DFD + EA+ +E I + + G++ +++K+ F
Sbjct: 240 SDVARAIKQMRMIDPDFDLYELEKEAKVIFEQIYNLYLLGELESLQKVCGEAALGYFKVL 299
Query: 142 LSTRKSNE-KNVKSSLVGIDDMKIINASIEENTV----YITIRIVGQFISASYDKDNLLI 196
L +++ + + L +D+++ ASI ++ TI+ F S + ++
Sbjct: 300 LKKQEAEKSEPKHKQLWNVDEIRFTRASIPDSVKLPVFVFTIKTQEIFCYVSKTDRSKIV 359
Query: 197 SSDPEIF 203
D E
Sbjct: 360 DGDDERI 366
>gi|327292843|ref|XP_003231119.1| mitochondrial inner membrane translocase subunit TIM44
[Trichophyton rubrum CBS 118892]
gi|326466749|gb|EGD92202.1| mitochondrial inner membrane translocase subunit TIM44
[Trichophyton rubrum CBS 118892]
Length = 543
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 379 AENETAMVIKAFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 437
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASY-DKD 192
++ K+ ++ I + I +A + + IT R Q + +K
Sbjct: 438 YSALTKQYKTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--SQEVHVYRKEKT 495
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 496 GELAAGMEDRVQLVT 510
>gi|322391461|ref|ZP_08064930.1| NinF protein [Streptococcus peroris ATCC 700780]
gi|321145544|gb|EFX40936.1| NinF protein [Streptococcus peroris ATCC 700780]
Length = 331
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 59/172 (34%), Gaps = 12/172 (6%)
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
D+ + N + N+ + + +FD F + A+ Y
Sbjct: 106 NDQNTPPETPYRRHTTNYEPEPTSHRRVENNNQAIDRLRYHDPNFDASTFTSWAKEVYIQ 165
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE-EN 172
+ ++ + +A+ L + +Y+ + L ++ V +++++I + + +
Sbjct: 166 LQAAWTKKDWNAVRSLESASLYKQHSTQLEDYIQSKTTNVLERVCVENVRIKDFNSNPDG 225
Query: 173 TVYITIRIVGQFIS-ASYDKDNLLISSDPEIFGKVIDIWT-----FVRNIPP 218
+ + + D+ +I +P D++T F+R
Sbjct: 226 NDTLVVILSSTLRDYVVEDESRKVIEGNP-----QKDLFTVYQMNFIRKHGS 272
>gi|115534069|ref|NP_497347.3| hypothetical protein Y119D3B.16 [Caenorhabditis elegans]
gi|97537043|sp|Q95Y71|RM45_CAEEL RecName: Full=Probable 39S ribosomal protein L45, mitochondrial;
Flags: Precursor
gi|78771770|gb|AAK29715.4| Hypothetical protein Y119D3B.16 [Caenorhabditis elegans]
Length = 357
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 13/142 (9%)
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
+ FD K F +A + Y + + A+ K + + + +
Sbjct: 165 KQGFEKFDIKTFCAKAEDIYVQAHRALEQRDKTAMYKYITEYAFAKMWPDVE-----NGS 219
Query: 152 VKSSLVGIDDMKIINA--------SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
V+ L+ + + + A + IT+R+ + A YD+ L+ +
Sbjct: 220 VRFELISVLEPSRVVAVRCFDNPPKSGNDIAQITVRMHTRQKLAVYDRFGGLLLGSEDEE 279
Query: 204 GKVIDIWTFVRNIPPSNPNWVL 225
V++ F +I + W L
Sbjct: 280 KDVVEYVVFENHIAVVDGEWRL 301
>gi|328859204|gb|EGG08314.1| hypothetical protein MELLADRAFT_47868 [Melampsora larici-populina
98AG31]
Length = 497
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 6/131 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T KV+R I + DF+ FL + R Y IVD++ + + ++ Y
Sbjct: 334 TETAKVVRLIKEIDRDFEFDGFLRDLRE-YIVPEIVDAYVDADLKVLKLWTSEGAYNVIT 392
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINAS-IEENTVYI-TIRIVGQFISASYDKDNLLIS 197
+ T ++ ++ + + I++A ++E + + I I+ + N +
Sbjct: 393 APMQTYLQRGLRPENQVIDLKGIDIMSAKVLQERELPVFVIAFRTHEINCFTNPGNGKVE 452
Query: 198 -SDPEIFGKVI 207
+P+ +V
Sbjct: 453 VGNPDQIEQVQ 463
>gi|302502672|ref|XP_003013297.1| hypothetical protein ARB_00482 [Arthroderma benhamiae CBS 112371]
gi|291176860|gb|EFE32657.1| hypothetical protein ARB_00482 [Arthroderma benhamiae CBS 112371]
Length = 584
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 420 AENETAMVIKAFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 478
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASY-DKD 192
++ K+ ++ I + I +A + + IT R Q + +K
Sbjct: 479 YSALTKQYKTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--SQEVHVYRKEKT 536
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 537 GELAAGMEDRVQLVT 551
>gi|326475398|gb|EGD99407.1| mitochondrial inner membrane translocase subunit TIM44
[Trichophyton tonsurans CBS 112818]
Length = 543
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 379 AENETAMVIKAFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 437
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASY-DKD 192
+ K+ ++ I + I +A + + IT R Q + +K
Sbjct: 438 YAALTKQYKTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--SQEVHVYRKEKT 495
Query: 193 NLLISSDPEIFGKVI 207
+ + V
Sbjct: 496 GEFAAGMEDKVQLVT 510
>gi|147865818|emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]
Length = 489
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 81 GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND 140
G RL + + F EA + Y+ I ++ K V +Y +
Sbjct: 376 GDRLKSAYAVAKLRKIGYSRQKFYTEAVDLYKEINSQIATSAKASLRKSVTENMYSALKN 435
Query: 141 SLSTRKSNEKNVKSSLVG-IDDMKIINASIE 170
+ R+S V +V + ++ + A ++
Sbjct: 436 EIKQRESKWHKVYWEMVEPVVKIRTLRARMD 466
>gi|54295462|ref|YP_127877.1| hypothetical protein lpl2548 [Legionella pneumophila str. Lens]
gi|53755294|emb|CAH16788.1| hypothetical protein lpl2548 [Legionella pneumophila str. Lens]
gi|307611500|emb|CBX01174.1| hypothetical protein LPW_28731 [Legionella pneumophila 130b]
Length = 270
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 76/222 (34%), Gaps = 44/222 (19%)
Query: 9 GDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKK 68
G L+ + FFV LR + + F T ++
Sbjct: 88 GLITWLILGSVIFFVVSFLR----------RKMNPGFQA-------------TQSGAFRQ 124
Query: 69 DNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEK 128
++ + + + N T FD +FL +A+ ++ + ++ + + ++
Sbjct: 125 NSFEQFTQNY---GNRNSGGAHFTQQETSFDADNFLRDAKVTFIRLQAAYDQKNLQDLQT 181
Query: 129 LVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS 188
V+ + L R ++ ++ + D K+++ S + ++ +++ G +
Sbjct: 182 FTVPEVFAEIKMQLDERGDAPN--QTEVISL-DAKLLDVSKQSLSMIASVQFTG-----T 233
Query: 189 YDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ + + +IW F R WV+ +
Sbjct: 234 IKENGEI--------SNLDEIWHF-RQFDNRK-EWVVGGIQQ 265
>gi|296417773|ref|XP_002838527.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634466|emb|CAZ82718.1| unnamed protein product [Tuber melanosporum]
Length = 512
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V+R + +F + FL E R Y ++D++ +G ++ + + Y
Sbjct: 348 AENETALVIRKFREMDPNFQVEPFLRELRE-YILPEVLDAYCKGDTDVLKAWLSAAQYNV 406
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ +N + ++ I ++ I++A I E I + I+ Q + D K
Sbjct: 407 YAALNQQYTANGLKLDGKVLDIRNVDILSARILEP-GEIPVFIITCRTQEVHVYRDLKTG 465
Query: 194 LLISSDPEIFGKVI 207
L + + +V
Sbjct: 466 ELKAGMEDKVQQVT 479
>gi|149577603|ref|XP_001516222.1| PREDICTED: similar to Timm44 protein [Ornithorhynchus anatinus]
Length = 452
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI---VDSFFEGKVHAIEKLVDSRVYQDF 138
T +++V+ +I+ V FD FL + ++ + I +++ G++ ++ Y
Sbjct: 296 TEMSEVLTEILKVDPTFDKDHFLRQCKD--DIIPNILEAMIAGELDILKDWCYEATYSQL 353
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKI 164
+ K+ S ++ ID++ +
Sbjct: 354 AHPIQQAKAMGLQFHSRILDIDNIDV 379
>gi|325118573|emb|CBZ54124.1| hypothetical protein NCLIV_045570 [Neospora caninum Liverpool]
Length = 624
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 62/195 (31%), Gaps = 24/195 (12%)
Query: 34 KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIG-----TRLNKVM 88
+ G E+P + + + K+ L + E + T + +
Sbjct: 397 RPGEERPTPEEQREDALVLSQRTTWDRFSSRFKEMSFLQNFFENPLVAQLFGETEIAASI 456
Query: 89 RDIVSVYTDF---DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
R++ + F D + + R IV +F G + + S+ R
Sbjct: 457 REMKILDPKFKLGDLHNMME--RVVAGHIVQAFLLGDEGTLAVHCAEGAFAALRASIIER 514
Query: 146 KSNEKNVKSSLVGIDDMKIINAS------------IEENTVYITIR-IVGQFISASYDK- 191
++ + + S ++ + +++++ A + + Q ++ +
Sbjct: 515 RAQKVRLDSEILQLGNVELVGARRSITPPICATANFSADECPWFVYTFTCQQVNCLRSEV 574
Query: 192 DNLLISSDPEIFGKV 206
D ++ + +V
Sbjct: 575 DGRVVEGREDDIRRV 589
>gi|289618005|emb|CBI55582.1| unnamed protein product [Sordaria macrospora]
Length = 520
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + V F+ ++FL E R Y +++++ +G V ++ + Y
Sbjct: 356 AENETAQVIKKLREVDPGFNMENFLMELRE-YILPEVLEAYVKGDVQTLKLWLSEAQYSV 414
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE----NTVYITIRIVGQFISASYD-KD 192
+ + ++ I + ++ A + + IT R Q + + K
Sbjct: 415 YEALTKQYLTAGLKSDGRILDIRGVDVLKARMLDPGDIPVFVITCR--TQEVHVYKNAKT 472
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 473 GKLAAGMEDKVQLVT 487
>gi|239613424|gb|EEQ90411.1| mitochondrial inner membrane translocase subunit TIM44 [Ajellomyces
dermatitidis ER-3]
Length = 522
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 11/147 (7%)
Query: 32 GKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD-------NLDSINELFPIGTRL 84
G++ EK +G V +D + + + NL
Sbjct: 304 GRRP-LEKMEEDPNAGTNVTLHKDAAWKESWKEFRDSSRLMQSYFNLKHTYNESENPNET 362
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
KV++ + F + FL E R Y ++D++ +G V ++ + Y +
Sbjct: 363 AKVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDVETLKLWLSEAQYNVYAALA 421
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASI 169
+ ++ I + I +A +
Sbjct: 422 QQYTTAGLKSDGRILDIRHVDISHARM 448
>gi|296807829|ref|XP_002844253.1| mitochondrial inner membrane translocase subunit TIM44 [Arthroderma
otae CBS 113480]
gi|238843736|gb|EEQ33398.1| mitochondrial inner membrane translocase subunit TIM44 [Arthroderma
otae CBS 113480]
Length = 540
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 376 AENETAMVIKTFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 434
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG----QFISASYDKDN 193
+ K+ ++ I + I +A + E I + I+ + +K
Sbjct: 435 YAALTKQYKTAGLKSDGRILDIRHVDISHARMLEP-GDIPVFIITCRTQEVHVYRKEKTG 493
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 494 ELAAGMEDKVQLVT 507
>gi|218894631|ref|YP_002443501.1| hypothetical protein PLES_59241 [Pseudomonas aeruginosa LESB58]
gi|218774860|emb|CAW30678.1| hypothetical protein PLES_59241 [Pseudomonas aeruginosa LESB58]
Length = 284
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 69/221 (31%), Gaps = 35/221 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
ILL A + F+ + ++++ G +
Sbjct: 98 MLDILLIALVA-FIAFR-------------------FIAARRRQQNQGQPAMAGHAPMQR 137
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + +F +++ + F+ + F+ AR + ++ + ++ I +
Sbjct: 138 EMPAQAPIFGGAAAAAAAPSPVINAPSWFNEERFVGAAREHFMSLQQHWDANEMDKIAEF 197
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + D+++ + + T+ G ++ +
Sbjct: 198 VTPQMLQWLKQ---ERAEIGDAYQSTYIDNLDVQLDGVDDQADKTIATLTFSGVSKTSRF 254
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D+ + W R + P W++ +
Sbjct: 255 DQGEA-----------FSESWRMERAQGENQP-WLVAGIRQ 283
>gi|317404450|gb|EFV84863.1| hypothetical protein HMPREF0005_02511 [Achromobacter xylosoxidans
C54]
Length = 178
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 44/134 (32%), Gaps = 17/134 (12%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DFD +FL +A+ + I + G + + + + L+ R + + L
Sbjct: 55 DFDTPNFLKQAKEQFVRIQAVWDSGSTDRLRDYLTDDLITELKPQLAERGAAPNKTEVVL 114
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
+ +++ + ++R G + + ++W
Sbjct: 115 LN---AELLGIETVSDGHLASVRFSGMLR-----------ETPGAEAFRFEEVWNL---F 157
Query: 217 PPSNPNWVLISTKL 230
P+N W+L +
Sbjct: 158 KPANGGWLLAGIQQ 171
>gi|330505764|ref|YP_004382633.1| import inner membrane translocase subunit Tim44 [Pseudomonas
mendocina NK-01]
gi|328920050|gb|AEB60881.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
mendocina NK-01]
Length = 284
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 64/217 (29%), Gaps = 33/217 (15%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
L+F I F+ + L + ++P Y + G L S
Sbjct: 100 LIFGLIA-FLLFRF---LAARRARQQPQMAAAGAPYQREMPNADNAPAAGSNIFGGRLAS 155
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
+ F+ + F+ R + + + ++ I + V +
Sbjct: 156 AAPVINAPAW--------------FNEQSFIAAGREHFMNLQQHWDADEMDKIAEFVTPQ 201
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
+ R +S+ IDD+++ +++N + A+
Sbjct: 202 LLDFLKR---ERAELGDGFQST--YIDDLQVQLDGVDDN---------AEKTIATLTFSG 247
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ +S + + W R + P W++ +
Sbjct: 248 VSKTSRFDQGEPFSESWRLERAQGDNQP-WLIAGIRQ 283
>gi|73960044|ref|XP_855187.1| PREDICTED: similar to 39S ribosomal protein L45, mitochondrial
precursor (L45mt) (MRP-L45) [Canis familiaris]
Length = 213
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A++ + + LV + D +
Sbjct: 42 IRKIREHDPNFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTENCFPDMVWDIK---- 97
Query: 148 NEKNVKSSLV-GIDDMKIINA-----SIEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V S V ++ +++ + N +T+R + A YD+ L+
Sbjct: 98 -YKMVHWSFVESLEPPQVVQVCCSNLLNQGNIYSQVTVRKHTRQTLAIYDRFGRLMYGQE 156
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 157 DVPRDVLEYVVFEKHLVNPYGSWR 180
>gi|311894532|dbj|BAJ26940.1| hypothetical protein KSE_11060 [Kitasatospora setae KM-6054]
Length = 443
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/187 (10%), Positives = 57/187 (30%), Gaps = 12/187 (6%)
Query: 50 VFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARN 109
+ KR R L + S + ++ + + F+ A
Sbjct: 74 MRRKRKARQAAGLNTVSDRTAHRSDEQARERAAQIGARVDALAETDPTFERGALEQRAVW 133
Query: 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
Y ++ + +++ +Y + + L S + +V ++++++ +
Sbjct: 134 LYTTAQQAWTRQDHAMLRQILSPVLYGKWAEELHDYASRGETNVVEIVAGPEVELVDLAN 193
Query: 170 EENTVYITIRI-----VGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
+ T+ + ++ Y +D+ + WT + W+
Sbjct: 194 RTGELNDTVTFRITATLNDYVRRQYGEDSARKDGSTRPV----EYWTLRKGPAGE---WI 246
Query: 225 LISTKLG 231
+ S +
Sbjct: 247 VSSIEQA 253
>gi|330898717|gb|EGH30136.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 155
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 54/168 (32%), Gaps = 15/168 (8%)
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGK 122
+ + G+ +++ F+ + FL+ AR ++++ + +
Sbjct: 1 AAPPYQRETSQPAQNPIFGSSSPASAAPVINAPAWFNEQRFLDAARGHFQSLQQHWDANE 60
Query: 123 VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182
+ I + V ++ Q R +S+ + +++ + T+ G
Sbjct: 61 MDKIAEFVTPQMLQFLK---KERADLGDGFQSTYIENLQVQLDGVDDRADKTIATLTFSG 117
Query: 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
++ +D + S W R + P W++ +
Sbjct: 118 VSKTSRFD-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 153
>gi|313111531|ref|ZP_07797330.1| hypothetical protein PA39016_003370006 [Pseudomonas aeruginosa
39016]
gi|310883832|gb|EFQ42426.1| hypothetical protein PA39016_003370006 [Pseudomonas aeruginosa
39016]
Length = 283
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 69/223 (30%), Gaps = 40/223 (17%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
ILL A + F+ + ++ ++R ++
Sbjct: 98 MLDILLIALVA-FIAFR----------------------FIAARRRQQNQGQPAMAGHAP 134
Query: 70 NLDSINELFPI--GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ PI G +++ + F+ + F+ AR + ++ + ++ I
Sbjct: 135 MQREMPAQAPIFGGAAATAAPSPVINAPSWFNEERFVGAAREHFMSLQQHWDANEMDKIA 194
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ V ++ Q R +S+ + +++ + + T+ G ++
Sbjct: 195 EFVTPQMLQWLKQ---ERAEIGDAYQSTYIDNLVVQLDGVDDQADKTIATLTFSGVSKTS 251
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D+ + W R + P W++ +
Sbjct: 252 RFDQGEA-----------FSESWRMERAQGENQP-WLVAGIRQ 282
>gi|171694970|ref|XP_001912409.1| hypothetical protein [Podospora anserina S mat+]
gi|170947727|emb|CAP59890.1| unnamed protein product [Podospora anserina S mat+]
Length = 569
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + ++ F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 405 AENETAMVIKKVRTMDPAFQMETFLQELRE-YILPEVLDAYVKGDVETLKLWLSEAQYSV 463
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE----NTVYITIRIVGQFISASYD-KD 192
+ N ++ I + ++ A + + IT R Q + + K
Sbjct: 464 YEALTKQYLQNGLKSDGRILDIRGVDVLKARMLDPGEIPVFVITCR--TQEVHVYRNAKT 521
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 522 GKLAAGMEDKVSLVT 536
>gi|67521648|ref|XP_658885.1| hypothetical protein AN1281.2 [Aspergillus nidulans FGSC A4]
gi|40746718|gb|EAA65874.1| hypothetical protein AN1281.2 [Aspergillus nidulans FGSC A4]
Length = 519
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 16/164 (9%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDS---RV 134
+V++ + +F + FL E R Y ++D++ +G + ++ + V
Sbjct: 355 AENETAQVVKKFREMDPNFQMEAFLREMRE-YILPEVLDAYVKGDIETLKLWLSDAQFHV 413
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-K 191
Y+ ++T ++ I + +++A + + + Q + + K
Sbjct: 414 YEALTKQITT---AGLKSDGRILDIRGVDVMSARMLDPGDIPVFVVMCRTQEVHVYRNVK 470
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNI-PPSNPN---WVLISTKLG 231
N L + + V + R +NP W LI +
Sbjct: 471 TNELAAGMEDKVQLVNYVMGLTRIPEDVNNPETKGWRLIELQKA 514
>gi|108761631|ref|YP_631938.1| hypothetical protein MXAN_3756 [Myxococcus xanthus DK 1622]
gi|108465511|gb|ABF90696.1| hypothetical protein MXAN_3756 [Myxococcus xanthus DK 1622]
Length = 654
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 12/139 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+ + F+ + L++ + + + ++F + + + +Q F L ++
Sbjct: 129 VNALKLKDPAFELEPMLDKTKWLFMELQQAWFLRDMTPVRPFLSDATFQRFGVQLELMRA 188
Query: 148 NEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSD---PEIFG 204
+ + D+++I + I +R+ + D D + SD E
Sbjct: 189 QGVRDAITDFEVLDLQLIGLDQSQWFDSIHVRVHARM----RDTDVPVSFSDAQATEAAR 244
Query: 205 KV-----IDIWTFVRNIPP 218
KV ++WTFVR
Sbjct: 245 KVPSEAFTEVWTFVRKPGA 263
>gi|327351927|gb|EGE80784.1| TIM23 translocase complex subunit Tim44 [Ajellomyces dermatitidis
ATCC 18188]
Length = 615
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
KV++ + F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 451 AENETAKVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDVETLKLWLSEAQYNV 509
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ I + I +A +
Sbjct: 510 YAALAQQYTTAGLKSDGRILDIRHVDISHARM 541
>gi|259488396|tpe|CBF87801.1| TPA: mitochondrial inner membrane translocase subunit TIM44,
putative (AFU_orthologue; AFUA_1G09840) [Aspergillus
nidulans FGSC A4]
Length = 514
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 16/164 (9%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDS---RV 134
+V++ + +F + FL E R Y ++D++ +G + ++ + V
Sbjct: 350 AENETAQVVKKFREMDPNFQMEAFLREMRE-YILPEVLDAYVKGDIETLKLWLSDAQFHV 408
Query: 135 YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-K 191
Y+ ++T ++ I + +++A + + + Q + + K
Sbjct: 409 YEALTKQITT---AGLKSDGRILDIRGVDVMSARMLDPGDIPVFVVMCRTQEVHVYRNVK 465
Query: 192 DNLLISSDPEIFGKVIDIWTFVRNI-PPSNPN---WVLISTKLG 231
N L + + V + R +NP W LI +
Sbjct: 466 TNELAAGMEDKVQLVNYVMGLTRIPEDVNNPETKGWRLIELQKA 509
>gi|295669600|ref|XP_002795348.1| mitochondrial inner membrane translocase subunit TIM44
[Paracoccidioides brasiliensis Pb01]
gi|226285282|gb|EEH40848.1| mitochondrial inner membrane translocase subunit TIM44
[Paracoccidioides brasiliensis Pb01]
Length = 533
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + F + FL E R Y ++D++ +G + ++ + Y
Sbjct: 369 AENETAMVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDIETLKLWLSEAQYNV 427
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASYD-KD 192
+ + ++ I + I +A + + IT R Q + + K
Sbjct: 428 YAALAKQYTTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--TQEVHVYRNAKT 485
Query: 193 NLLISSDPEIFGKVI 207
N L + + V
Sbjct: 486 NELAAGMEDKVQLVT 500
>gi|261194711|ref|XP_002623760.1| mitochondrial inner membrane translocase subunit TIM44 [Ajellomyces
dermatitidis SLH14081]
gi|239588298|gb|EEQ70941.1| mitochondrial inner membrane translocase subunit TIM44 [Ajellomyces
dermatitidis SLH14081]
Length = 540
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
KV++ + F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 376 AENETAKVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDVETLKLWLSEAQYNV 434
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ I + I +A +
Sbjct: 435 YAALAQQYTTAGLKSDGRILDIRHVDISHARM 466
>gi|290977539|ref|XP_002671495.1| predicted protein [Naegleria gruberi]
gi|284085064|gb|EFC38751.1| predicted protein [Naegleria gruberi]
Length = 405
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND---SLSTRKSNEKN 151
DF+ K+F+ A+ +++ I + E +E + Y+ F + ++ +
Sbjct: 99 DADFNEKEFIEGAKEAFKTIRELLVE-DPTQLEPMFTQSAYEGFKEWYKFIT--EEKHCK 155
Query: 152 VKSSLVGIDDMKIINASIE-ENTVYITIR 179
+ SL + + +I+N ++ + I +R
Sbjct: 156 IVGSLENLGETEILNIRVDADGETIINVR 184
>gi|320586817|gb|EFW99480.1| mitochondrial inner membrane translocase subunit [Grosmannia
clavigera kw1407]
Length = 554
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 21/177 (11%)
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVH 124
+ D I F V++ + + F + FL E R Y ++D++ +G V
Sbjct: 378 ARSITDRIAGFFAE-NETAMVIKKLRQMDPAFQLEPFLRELRE-YILPEVLDAYVKGDVE 435
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG-- 182
++ + + + ++ I + I+ A + E I + I+
Sbjct: 436 TLKLWLSEAQFSVYEALTKQYLQAGLKSDGRILDIRHVDILKARMLEP-GEIPVFIITCR 494
Query: 183 --QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTK 229
+ K L + + V T+ I SNP W LI +
Sbjct: 495 TQEVHVYRKVKSGDLAAGMEDKVQLV----TYAIGITRMPDDVSNPETRGWRLIEMQ 547
>gi|154314867|ref|XP_001556757.1| hypothetical protein BC1G_04775 [Botryotinia fuckeliana B05.10]
gi|150848313|gb|EDN23506.1| hypothetical protein BC1G_04775 [Botryotinia fuckeliana B05.10]
Length = 541
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + F + FL E R Y ++D++ +G ++ + + +
Sbjct: 378 AENETAQVIKKFREMDPSFQMEPFLREMRE-YILPEVLDAYVKGDTETLKLWLSAAQFSV 436
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV---YITIRIVGQFISASYD-KDN 193
++ + ++ I +++++A + +N + IT R Q + + K N
Sbjct: 437 YDALSKQYTTAGLKSDGRILDIRHVEVLSARMLDNDIPVFIITCR--TQEVHVYRNAKTN 494
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 495 QLAAGMEDKVQLVT 508
>gi|221486633|gb|EEE24894.1| import inner membrane translocase subunit TIM44, putative
[Toxoplasma gondii GT1]
Length = 598
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 49/142 (34%), Gaps = 19/142 (13%)
Query: 82 TRLNKVMRDIVSVYTDF---DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF 138
T + +R++ + F D + + ++ IV +F G + +
Sbjct: 424 TEIAASIREMKILDPKFKLADMHNMMERVIAAH--IVQAFLLGDEGTLAVHCAEGAFAAM 481
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINAS------------IEENTVYITIR-IVGQFI 185
S+ R++ + + S ++ + +++++ A + + Q +
Sbjct: 482 RASIIERRAQKVRLDSEILQLGNVELVGARRSLTPPICATQNFSADECPWFVYTFTCQQV 541
Query: 186 SASYDK-DNLLISSDPEIFGKV 206
+ + D ++ + +V
Sbjct: 542 NCLRSEVDGRVVEGREDDIRRV 563
>gi|70995173|ref|XP_752351.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus fumigatus Af293]
gi|66849986|gb|EAL90313.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus fumigatus Af293]
gi|159131108|gb|EDP56221.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus fumigatus A1163]
Length = 523
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 20/166 (12%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F + FL E R Y ++D++ +G + ++ + +
Sbjct: 359 AENETAQVIKKFREMDPNFQMESFLREMRE-YILPEVLDAYVKGDIETLKLWLSDAQFHV 417
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + ++ I + + +A + E I + +V Q + + K
Sbjct: 418 YAALSKQYTTAGLKSDGRILDIRGVDVSHARMLEP-GEIPVFVVTCRTQEVHVYRNVKTG 476
Query: 194 LLISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 477 ELAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 518
>gi|237834217|ref|XP_002366406.1| mitochondrial import inner membrane translocase TIM44, putative
[Toxoplasma gondii ME49]
gi|211964070|gb|EEA99265.1| mitochondrial import inner membrane translocase TIM44, putative
[Toxoplasma gondii ME49]
Length = 598
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 49/142 (34%), Gaps = 19/142 (13%)
Query: 82 TRLNKVMRDIVSVYTDF---DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF 138
T + +R++ + F D + + ++ IV +F G + +
Sbjct: 424 TEIAASIREMKILDPKFKLADMHNMMERVIAAH--IVQAFLLGDEGTLAVHCAEGAFAAM 481
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINAS------------IEENTVYITIR-IVGQFI 185
S+ R++ + + S ++ + +++++ A + + Q +
Sbjct: 482 RASIIERRAQKVRLDSEILQLGNVELVGARRSLTPPICATQNFSADECPWFVYTFTCQQV 541
Query: 186 SASYDK-DNLLISSDPEIFGKV 206
+ + D ++ + +V
Sbjct: 542 NCLRSEVDGRVVEGREDDIRRV 563
>gi|226290219|gb|EEH45703.1| mitochondrial inner membrane translocase subunit TIM44
[Paracoccidioides brasiliensis Pb18]
Length = 534
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + F + FL E R Y ++D++ +G + ++ + Y
Sbjct: 370 AENETAMVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDIETLKLWLSEAQYNV 428
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASYD-KD 192
+ + ++ I + I +A + + IT R Q + + K
Sbjct: 429 YAALAKQYTTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--TQEVHVYRNAKT 486
Query: 193 NLLISSDPEIFGKVI 207
N L + + V
Sbjct: 487 NELAAGMEDKVQLVT 501
>gi|308460507|ref|XP_003092557.1| hypothetical protein CRE_26805 [Caenorhabditis remanei]
gi|308253077|gb|EFO97029.1| hypothetical protein CRE_26805 [Caenorhabditis remanei]
Length = 361
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 13/142 (9%)
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
+ FD K F +A + Y + + + + + + +
Sbjct: 167 KQGFEKFDVKTFCAKAEDIYVRAHKALEARDKKEMYRCITEYAFAKMWPDVE-----NGS 221
Query: 152 VKSSLVGIDDMKIINA--------SIEENTVYITIRIVGQFISASYDKDNLLISSDPEIF 203
V+ LV + + + A + IT+R+ + A YD+ LI
Sbjct: 222 VRFELVEVVEPSRVVAVRCFDNPPKSGNDIAQITVRMHTKQKLAVYDRFGGLILGSENEE 281
Query: 204 GKVIDIWTFVRNIPPSNPNWVL 225
V++ F +I + W L
Sbjct: 282 KDVVEYVVFENHIAVVDGEWRL 303
>gi|225682773|gb|EEH21057.1| TIM23 translocase complex subunit Tim44 [Paracoccidioides
brasiliensis Pb03]
Length = 534
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + F + FL E R Y ++D++ +G + ++ + Y
Sbjct: 370 AENETAMVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDIETLKLWLSEAQYNV 428
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASYD-KD 192
+ + ++ I + I +A + + IT R Q + + K
Sbjct: 429 YAALAKQYTTAGLKSDGRILDIRHVDISHARMLEPGDIPVFIITCR--TQEVHVYRNAKT 486
Query: 193 NLLISSDPEIFGKVI 207
N L + + V
Sbjct: 487 NELAAGMEDKVQLVT 501
>gi|119496017|ref|XP_001264782.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Neosartorya fischeri NRRL 181]
gi|119412944|gb|EAW22885.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Neosartorya fischeri NRRL 181]
Length = 509
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 20/166 (12%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F + FL E R Y ++D++ +G + ++ + +
Sbjct: 345 AENETAQVIKKFREMDPNFQMESFLREMRE-YILPEVLDAYVKGDIETLKLWLSDAQFHV 403
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + ++ I + + +A + E I + +V Q + + K
Sbjct: 404 YAALSKQYTTAGLKSDGRILDIRGVDVSHARMLEP-GEIPVFVVTCRTQEVHVYRNVKTG 462
Query: 194 LLISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 463 ELAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 504
>gi|89897269|ref|YP_520756.1| hypothetical protein DSY4523 [Desulfitobacterium hafniense Y51]
gi|89336717|dbj|BAE86312.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 315
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 7/205 (3%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
I L I ++ G ++T + G + +T +
Sbjct: 87 LISIALILGI-VYLIYIAWGS-SRRTWKNQRSKGHSNYNNHNDSSPHPIDVTGKPITNAE 144
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
NL N + MR ++ +D + + R + I D++ + E
Sbjct: 145 NLRRFNNAIQ---YTRENMRYYAESFSRWDRQFLIERVRQVFFWIQDAWTRQDLTGGENY 201
Query: 130 VDSRVYQDFNDSLSTRKSNEKN--VKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ S V Q ++ L S + +K ++ +D++ I++ + E++ Y + + I
Sbjct: 202 IVSSVLQKYSLDLENMNSRGERNVIKEPVLHAEDIEFIHSYLGESSQYFVVMLRASMIDY 261
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTF 212
+ D +I+ + + + W F
Sbjct: 262 TVDTSGKIIAGEDDNRLYFTEFWRF 286
>gi|221508389|gb|EEE33976.1| mitochondrial import inner membrane translocase TIM44, putative
[Toxoplasma gondii VEG]
Length = 598
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 49/142 (34%), Gaps = 19/142 (13%)
Query: 82 TRLNKVMRDIVSVYTDF---DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF 138
T + +R++ + F D + + ++ IV +F G + +
Sbjct: 424 TEIAASIREMKILDPKFKLADMHNMMERVIAAH--IVQAFLLGDEGTLAVHCAEGAFAAM 481
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINAS------------IEENTVYITIR-IVGQFI 185
S+ R++ + + S ++ + +++++ A + + Q +
Sbjct: 482 RASIIERRAQKVRLDSEILQLGNVELVGARRSLTPPICATQNFSADECPWFVYTFTCQQV 541
Query: 186 SASYDK-DNLLISSDPEIFGKV 206
+ + D ++ + +V
Sbjct: 542 NCLRSEVDGRVVEGREDDIRRV 563
>gi|332286636|ref|YP_004418547.1| hypothetical protein PT7_3383 [Pusillimonas sp. T7-7]
gi|330430589|gb|AEC21923.1| hypothetical protein PT7_3383 [Pusillimonas sp. T7-7]
Length = 314
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 18/134 (13%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
DFD FL A+ + I + G + + + + + L R + + +
Sbjct: 192 DFDTSAFLANAKAQFIEIQAVWDSGDLTRLTDYMTDDLVAEIKPELMAR---GEGNVTEV 248
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
V ++ +++ ++R G A D + + ++W
Sbjct: 249 VLLN-AELLGIEAVSGGHLASVRYSGMLREA-KDAE----------AFRFEEVWNL---Y 293
Query: 217 PPSNPNWVLISTKL 230
N W+L +
Sbjct: 294 KGDNTGWLLAGIQQ 307
>gi|72153688|ref|XP_792216.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115703999|ref|XP_001203219.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 210
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 29/162 (17%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ-------DFN-DSLSTRK 146
DF +F A+ + I + EG + +E L+ ++ Q F+ +S+
Sbjct: 41 DPDFSIDEFTQGAKQALVTISEEIAEGTLENLEDLLSPKLLQEIKNTCRGFSLKEISSLS 100
Query: 147 SNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFI-SASYDKDNLLISS------D 199
+ K++ + D+ I ++I ++ S S D + +
Sbjct: 101 ISGKDILHTF--PHDIAIHYDDKGGKFLFILMKFWCHSTQSGSSDPE---VKGFRIGKPP 155
Query: 200 PEIFGKVID--------IWTFVRNIPP-SNPNWVLISTKLGE 232
P + + D + F RNI +NP W++ + G+
Sbjct: 156 PGVSQEQFDSLGSVYSCTYEFHRNISAGANPQWMITHMQHGQ 197
>gi|156052641|ref|XP_001592247.1| hypothetical protein SS1G_06487 [Sclerotinia sclerotiorum 1980]
gi|154704266|gb|EDO04005.1| hypothetical protein SS1G_06487 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 344
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + F + FL E R Y ++D++ +G ++ + + +
Sbjct: 181 AENETAQVIKKFREMDPSFQMEPFLREMRE-YILPEVLDAYVKGDTETLKLWLSAAQFSV 239
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV---YITIRIVGQFISASYD-KDN 193
++ + ++ I +++++A + +N + IT R Q + + K N
Sbjct: 240 YDALSKQYTTAGLKSDGRILDIRHVEVLSARMLDNDIPVFIITCR--TQEVHVYRNAKTN 297
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 298 QLAAGMEDKVQLVT 311
>gi|152986284|ref|YP_001351640.1| hypothetical protein PSPA7_6329 [Pseudomonas aeruginosa PA7]
gi|150961442|gb|ABR83467.1| hypothetical protein PSPA7_6329 [Pseudomonas aeruginosa PA7]
Length = 281
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 68/221 (30%), Gaps = 38/221 (17%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
ILL A + F+ + ++ ++R ++
Sbjct: 98 MLDILLIALVA-FIAFR----------------------FIAARRRQQAQAQPAMAGHAP 134
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ PI +++ + F+ + F+ AR + ++ + ++ I +
Sbjct: 135 MQREMPAQAPIFGGAAAAPSPVINAPSWFNEERFVGAAREHFMSLQQHWDANEMDKIAEF 194
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + + T+ G ++ +
Sbjct: 195 VTPQMLQWLKQ---ERAEIGDAYQSTYIDNLAVQLDGVDDQADKTIATLTFSGVSKTSRF 251
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D+ + W R + P W++ +
Sbjct: 252 DQGEA-----------FSESWRMERAQGENQP-WLVAGIRQ 280
>gi|321452278|gb|EFX63702.1| hypothetical protein DAPPUDRAFT_335104 [Daphnia pulex]
Length = 271
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS 154
+F DFL A+ + I ++ G + +++++++ Y + +++ R S+E+ +
Sbjct: 111 DNEFTVDDFLRGAKQAIFIIANAISVGDLESVKEMLEEEAYNEIKENMK-RCSSEQLAQF 169
Query: 155 SLVGIDDMKI-----INASIEENTVYITIRIV 181
+L ++D+ + + + +N + R V
Sbjct: 170 ALSTLEDVYMTFPYQVGIIMNDNKEGVQERFV 201
>gi|289677454|ref|ZP_06498344.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
syringae pv. syringae FF5]
Length = 151
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 54/163 (33%), Gaps = 15/163 (9%)
Query: 68 KDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ + G+ +++ F+ + FL+ AR ++++ + ++ I
Sbjct: 2 QRETSQPAQNPIFGSSSPASTAPVINAPAWFNEQRFLDAARGHFQSLQQHWDANEMDKIA 61
Query: 128 KLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISA 187
+ V ++ Q R +S+ + +++ + T+ G ++
Sbjct: 62 EFVTPQMLQFLK---KERADLGDGFQSTYIENLQVQLDGVDDRADKTIATLTFSGVSKTS 118
Query: 188 SYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+D + S W R + P W++ +
Sbjct: 119 RFD-QGEVFSES----------WNMERPQGDNQP-WLVAGIRQ 149
>gi|293400358|ref|ZP_06644504.1| hypothetical membrane protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306758|gb|EFE48001.1| hypothetical membrane protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 297
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 43/126 (34%), Gaps = 1/126 (0%)
Query: 78 FPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD 137
G +++ I F ++F N A + + +++ H + + ++
Sbjct: 106 SNEGIFEEEIIARIQEEDPAFSAENFRNYASEVWLTLQEAWEAKDWHKVRPFESNTLFNV 165
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD-NLLI 196
N L + K ++ + + I + S +E + +++ + D D ++
Sbjct: 166 HNRQLQEYIDHHKTNYMNMQNVRGITIASYSSDEEHEIVHVKLDASLLDYVVDDDSGKVL 225
Query: 197 SSDPEI 202
Sbjct: 226 EGSKTD 231
>gi|258570273|ref|XP_002543940.1| mitochondrial import inner membrane translocase subunit TIM44
[Uncinocarpus reesii 1704]
gi|237904210|gb|EEP78611.1| mitochondrial import inner membrane translocase subunit TIM44
[Uncinocarpus reesii 1704]
Length = 500
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G ++ + +
Sbjct: 336 AENETAMVIKRFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDTETLKLWLSDAQFHV 394
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + ++ I + I +A + E I + IV Q + + K N
Sbjct: 395 YAALAKQYTTAGLKSDGRILDIRHVDISHARMLEP-GDIPVFIVTCRTQEVHVYRNAKTN 453
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 454 ELAAGMEDKVQLVT 467
>gi|224088015|ref|XP_002196182.1| PREDICTED: similar to translocase of inner mitochondrial membrane
Tim44, partial [Taeniopygia guttata]
Length = 365
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 53 KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE 112
+ I + D I LF T +++V+ +I+ V FD FL + +
Sbjct: 255 DESDNAFIRASRAVTDRVTDLIGGLFSK-TEMSEVLTEILKVDPSFDKDRFLKQCER--D 311
Query: 113 AI---VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK 163
I +++ G++ ++ Y + K+ S ++ ID++
Sbjct: 312 IIPNVLEALISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRILDIDNID 365
>gi|121702021|ref|XP_001269275.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus clavatus NRRL 1]
gi|119397418|gb|EAW07849.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Aspergillus clavatus NRRL 1]
Length = 512
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 20/166 (12%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 348 AENETAQVIKKFREMDPNFQMESFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 406
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + ++ I + + NA + E I + +V Q + + K
Sbjct: 407 YAALSKQYTTAGLKSDGRILDIRGVDVSNARMLEP-GEIPVFVVTCRTQEVHVYRNVKSG 465
Query: 194 LLISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 466 ELAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 507
>gi|322693819|gb|EFY85667.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Metarhizium acridum CQMa 102]
Length = 538
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 48/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ S+ F + FL E R Y ++D++ +G ++ + + +
Sbjct: 374 AENETALVIKKFRSMDPAFQVEPFLQELRE-YILPEVLDAYVKGDTETLKLWLSAAQFSV 432
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ ++ I ++ I+ A + + + + I+ Q + + K N
Sbjct: 433 YEALTKQYLQAGMKSDGRILDIRNVDILRARMLDP-GEVPVFIITCRTQEVHVYRNAKTN 491
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 492 ELAAGMEDKVQLVT 505
>gi|145614776|ref|XP_001414030.1| hypothetical protein MGG_11419 [Magnaporthe oryzae 70-15]
gi|145021662|gb|EDK05791.1| hypothetical protein MGG_11419 [Magnaporthe oryzae 70-15]
Length = 551
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + + F + FLN+ R Y ++D++ +G V ++ + +
Sbjct: 387 AENETAMVIKKLRQMDPAFQLEPFLNDLRE-YILPEVLDAYVKGDVETLKLWLSEAQFSV 445
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASYD-KD 192
+ +V I + I+ A + + IT R Q + + K
Sbjct: 446 YEALTKQYLQMGMKSDGKIVDIRGVDILKARLLEPGDIPVFIITCR--TQEVHVYRNAKS 503
Query: 193 NLLISSDPEIFGKVI 207
L + + V
Sbjct: 504 GELAAGMEDRVQLVT 518
>gi|297265563|ref|XP_002808078.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L45,
mitochondrial-like [Macaca mulatta]
Length = 497
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 12/144 (8%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS 147
+R I +F KDF +A+N + + LV + D +
Sbjct: 313 IRRIKDYDANFKIKDFPEKAKNIFIEAHLCLNNSDHDRLYTLVTEHCFPDMTWDIK---- 368
Query: 148 NEKNVKSSLV------GIDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLISSDP 200
K V+ S V + + + + N +T+ + + A YD+ L+
Sbjct: 369 -YKTVRXSFVESLEPSHVVQVHCSSIMNQGNVYGQVTVCMHTRQTLAIYDRFGRLMYGQE 427
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F + + +W
Sbjct: 428 DVPKDVLEYVVFEKQLTNPYGSWR 451
>gi|254582268|ref|XP_002497119.1| ZYRO0D15840p [Zygosaccharomyces rouxii]
gi|238940011|emb|CAR28186.1| ZYRO0D15840p [Zygosaccharomyces rouxii]
Length = 407
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 8/142 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
T KV+ + F + F + R+ Y +++++ +G ++K +
Sbjct: 242 AETETAKVIGQFKLLDPSFTSEGFTRQLRD-YVIPEVLEAYAKGDEKTLKKWFSEAPFNV 300
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + + S ++ I + I++A + I + IV Q I K
Sbjct: 301 YAAQQKFFRDQKLFADSRILDIRGVDIVSAKLLPPQ-DIPVLIVGCRAQEIQLYRSIKSG 359
Query: 194 LLISSDPEIFGKVIDIWTFVRN 215
+ + F R+
Sbjct: 360 EVAAGHESNILMSSYAMVFTRD 381
>gi|222110012|ref|YP_002552276.1| import inner membrane translocase subunit tim44 [Acidovorax ebreus
TPSY]
gi|221729456|gb|ACM32276.1| import inner membrane translocase subunit Tim44 [Acidovorax ebreus
TPSY]
Length = 335
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 11/137 (8%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS-NEKNV--K 153
FD + FL+ A+ ++ + ++ V + ++ + + L+ R+S +
Sbjct: 210 GFDTEGFLSAAKRNFTTLQAAWDRSDVATLRSMMTDSMVDEIRTQLNERESHRGDQQPNQ 269
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ ++ + + +++ + ++ ++ ++W
Sbjct: 270 TDVIML-EAQLLGIEDLGDGYMASVEFS-----------GMIREEPSAGPSPFREVWNMT 317
Query: 214 RNIPPSNPNWVLISTKL 230
+ W++ +
Sbjct: 318 KP-KNGASGWLVAGVQA 333
>gi|307185468|gb|EFN71468.1| Uncharacterized protein C2orf47-like protein, mitochondrial
[Camponotus floridanus]
Length = 178
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 22/56 (39%)
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+R + +FD +FL A+ + I + +++ LV + + +
Sbjct: 25 LRIAPYIDKEFDIAEFLKGAKYATAIISKALTNKNYDSLQGLVTEDMIEILRAKIE 80
>gi|15600721|ref|NP_254215.1| hypothetical protein PA5528 [Pseudomonas aeruginosa PAO1]
gi|107104630|ref|ZP_01368548.1| hypothetical protein PaerPA_01005709 [Pseudomonas aeruginosa PACS2]
gi|254237792|ref|ZP_04931115.1| hypothetical protein PACG_03888 [Pseudomonas aeruginosa C3719]
gi|254243078|ref|ZP_04936400.1| hypothetical protein PA2G_03868 [Pseudomonas aeruginosa 2192]
gi|9951866|gb|AAG08913.1|AE004965_5 hypothetical protein PA5528 [Pseudomonas aeruginosa PAO1]
gi|126169723|gb|EAZ55234.1| hypothetical protein PACG_03888 [Pseudomonas aeruginosa C3719]
gi|126196456|gb|EAZ60519.1| hypothetical protein PA2G_03868 [Pseudomonas aeruginosa 2192]
Length = 284
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 68/221 (30%), Gaps = 35/221 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
ILL A + F+ + ++++ G +
Sbjct: 98 MLDILLIALVA-FIAFR-------------------FIAARRRQQNQGQPAMAGHAPMQR 137
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + +F +++ + F+ + F+ AR + ++ + ++ I +
Sbjct: 138 EMPAQAPIFGGAAAAAAAPSPVINAPSWFNEERFVGAAREHFMSLQQHWDANEMDKIAEF 197
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + + T+ G ++ +
Sbjct: 198 VTPQMLQWLKQ---ERAEIGDAYQSTYIDNLVVQLDGVDDQADKTIATLTFSGVSKTSRF 254
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D+ + W R + P W++ +
Sbjct: 255 DQGEA-----------FSESWRMERAQGENQP-WLVAGIRQ 283
>gi|134076790|emb|CAK39845.1| unnamed protein product [Aspergillus niger]
Length = 508
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 55/165 (33%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 344 AENETARVIKKFREMDPNFQMEAFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 402
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ + + + +A + + + Q + + K
Sbjct: 403 YAALAQQYTTAGLKSDGRILDVRGVDVSHARMLEPGDIPVFVVTCRSQEVHVYKNVKTGE 462
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 463 LAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 503
>gi|154287202|ref|XP_001544396.1| hypothetical protein HCAG_01443 [Ajellomyces capsulatus NAm1]
gi|150408037|gb|EDN03578.1| hypothetical protein HCAG_01443 [Ajellomyces capsulatus NAm1]
Length = 520
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 356 AENETAMVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDVETLKLWLSEAQYNV 414
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ I + I +A +
Sbjct: 415 YAALAQQYTTAGLKSDGRILDIRHVDISHARM 446
>gi|317030304|ref|XP_001392284.2| TIM23 translocase complex subunit Tim44 [Aspergillus niger CBS
513.88]
Length = 514
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 55/165 (33%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
+V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 350 AENETARVIKKFREMDPNFQMEAFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 408
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ + + + +A + + + Q + + K
Sbjct: 409 YAALAQQYTTAGLKSDGRILDVRGVDVSHARMLEPGDIPVFVVTCRSQEVHVYKNVKTGE 468
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 469 LAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 509
>gi|225559726|gb|EEH08008.1| mitochondrial inner membrane translocase subunit TIM44 [Ajellomyces
capsulatus G186AR]
Length = 541
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 377 AENETAMVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDVETLKLWLSEAQYNV 435
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ I + I +A +
Sbjct: 436 YAALAQQYTTAGLKSDGRILDIRHVDISHARM 467
>gi|121593290|ref|YP_985186.1| import inner membrane translocase subunit Tim44 [Acidovorax sp.
JS42]
gi|120605370|gb|ABM41110.1| import inner membrane translocase, subunit Tim44 [Acidovorax sp.
JS42]
Length = 335
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 11/137 (8%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKS-NEKNV--K 153
FD + FL+ A+ ++ + ++ V + ++ + + L+ R+S +
Sbjct: 210 GFDTEGFLSAAKRNFTTLQAAWDRSDVATLRSMMTDSMVDEIRTQLNERESHRGDQQPNQ 269
Query: 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ ++ + + +++ + ++ ++ ++W
Sbjct: 270 TDVIML-EAQLLGIEDLGDGYMASVEFS-----------GMIREEPSAGPSPFREVWNMT 317
Query: 214 RNIPPSNPNWVLISTKL 230
+ W++ +
Sbjct: 318 KP-KNGASGWLVAGVQA 333
>gi|240276404|gb|EER39916.1| mitochondrial inner membrane translocase subunit TIM44 [Ajellomyces
capsulatus H143]
gi|325089734|gb|EGC43044.1| mitochondrial inner membrane translocase subunit TIM44 [Ajellomyces
capsulatus H88]
Length = 541
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + F + FL E R Y ++D++ +G V ++ + Y
Sbjct: 377 AENETAMVIKKFREMDPSFQIEPFLRELRE-YMLPEVLDAYVKGDVETLKLWLSEAQYNV 435
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ + ++ I + I +A +
Sbjct: 436 YAALAQQYTTAGLKSDGRILDIRHVDISHARM 467
>gi|322387219|ref|ZP_08060829.1| NinF protein [Streptococcus infantis ATCC 700779]
gi|321141748|gb|EFX37243.1| NinF protein [Streptococcus infantis ATCC 700779]
Length = 246
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 12/144 (8%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+ + + +FD F + A+ Y + ++ + + + L +Y + L
Sbjct: 53 QAIDRLRYYDPNFDASAFTSWAKEVYIQLQAAWTKKDWNLVRSLESVSLYTQHSAQLEDY 112
Query: 146 KSNEKNVKSSLVGIDDMKIINASIE-ENTVYITIRIVGQFIS-ASYDKDNLLISSDPEIF 203
++ V +++++I + + + + + + DK +I DP
Sbjct: 113 IQSQTTNVLERVYVENVRIKDFNSNPDGNDTLVVILSSTLRDYVIDDKTRKVIEGDP--- 169
Query: 204 GKVIDIWT-----FVRNIPPSNPN 222
D++T F+R N
Sbjct: 170 --QQDLFTVYQMNFIRKHGSQTEN 191
>gi|322711640|gb|EFZ03213.1| mitochondrial inner membrane translocase subunit TIM44 [Metarhizium
anisopliae ARSEF 23]
Length = 538
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 48/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ S+ F + FL E R Y ++D++ +G ++ + + +
Sbjct: 374 AENETALVIKKFRSMDPAFQVEPFLQELRE-YILPEVLDAYVKGDTETLKLWLSAAQFSV 432
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ ++ I ++ I+ A + + + + I+ Q + + K N
Sbjct: 433 YEALTKQYLQAGMKSDGRILDIRNVDILRARMLDP-GEVPVFIITCRTQEVHVYRNAKSN 491
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 492 ELAAGMEDKVQLVT 505
>gi|293399808|ref|ZP_06643954.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306208|gb|EFE47451.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 249
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 55/138 (39%), Gaps = 16/138 (11%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL--- 142
K++++I + +D + A+ +++ + ++ + + +++ L
Sbjct: 77 KLLKEIDDLDAIWDEDHIYERVEEIFYAVQNAWTTKSLEELQPYLSDALMENWKTKLDWM 136
Query: 143 STRKSNE-----KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISAS-YDKDNLLI 196
R+ + + S+VGI D I++ + I G+ I + ++ D L+
Sbjct: 137 DIRRERNILENIQLLSRSIVGIYDA------IDDRKDMVWFYIEGKMIDYTIHEDDGSLL 190
Query: 197 SSDPEIFGKVIDIWTFVR 214
D + ++ W +R
Sbjct: 191 DGDKQAHS-FVEFWKLIR 207
>gi|309799759|ref|ZP_07693972.1| putative transporter [Streptococcus infantis SK1302]
gi|308116608|gb|EFO54071.1| putative transporter [Streptococcus infantis SK1302]
Length = 305
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 48/143 (33%), Gaps = 12/143 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD F + + Y + ++ + + + L + +Y + L
Sbjct: 113 AVSRVKHGDPNFDADTFASWVKEVYIQLQAAWTKKDWNLVRSLESTSLYSQHSTQLEDHI 172
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFIS-ASYDKDNLLISSDPEIFG 204
+ V +++++I + + + + + D+ +I DP
Sbjct: 173 RAKTTNVLEKVYVENIRIKDFYENPDGNDTLVVILSSTLRDYIIEDQSKRVIEGDP---- 228
Query: 205 KVIDIWT-----FVRNIPPSNPN 222
D++T F+R N
Sbjct: 229 -QEDLFTVYQMNFIRKHGSQTEN 250
>gi|302884408|ref|XP_003041100.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256721996|gb|EEU35387.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 504
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 53/147 (36%), Gaps = 9/147 (6%)
Query: 67 KKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVH 124
+ D I F V++ ++ F + FL E R Y ++D++ +G+
Sbjct: 328 ARSITDRIAGFFAE-NETAMVIKKFRAMDPSFQVEPFLQELRE-YILPEVLDAYVKGETE 385
Query: 125 AIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV--- 181
++ + + Y + ++ I ++ I+ A + + + + I+
Sbjct: 386 TLKLWLSAAQYSVYEALTKQYLQAGMKSDGKILDIRNVDILRARMLDP-GEVPVFIITCR 444
Query: 182 GQFISASYD-KDNLLISSDPEIFGKVI 207
Q + + K N L + + V
Sbjct: 445 TQEVHVYRNAKTNELAAGMEDKVQLVT 471
>gi|46111759|ref|XP_382937.1| hypothetical protein FG02761.1 [Gibberella zeae PH-1]
Length = 502
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ S+ F + FL E R Y ++D++ +G+ ++ + + Y
Sbjct: 338 AENETAMVIKKFRSMDPGFQTEPFLQELRE-YILPEVLDAYVKGETETLKLWLSAAQYSV 396
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ ++ I ++ I+ A + + + + IV Q + + K N
Sbjct: 397 YEALTKQYLQAGMKSDGKILDIRNVDILRARMLDP-GEVPVFIVTCRTQEVHVYRNAKTN 455
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 456 ELAAGMEDKVQLVT 469
>gi|324518944|gb|ADY47245.1| 39S ribosomal protein L45 [Ascaris suum]
Length = 365
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST----RKSNEKNVK 153
FDPK F A + Y + + K + + + + E+
Sbjct: 188 FDPKLFGATADSIYVEAHKALMARDKVMLHKYITEHAFVKMWPDVENGSVVWEMVEQKEP 247
Query: 154 SSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWT 211
S +V I ++ + + +T+R+ A YDK LI V++
Sbjct: 248 SRVVAIR---CSDSPYKSGNDIAQLTVRMHTVQKLAIYDKFGRLILGSEVEPKAVVEYVV 304
Query: 212 FVRNIPPSNPNWVL 225
F +I + W L
Sbjct: 305 FENHIASLDGAWRL 318
>gi|298706514|emb|CBJ29484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 246
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 13/153 (8%)
Query: 91 IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNE- 149
I DF F A ++ ++ +G A+ L +Y + + KS
Sbjct: 70 IQKHVPDFHVSKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEIKSSKSRGA 129
Query: 150 KNVKSSLVGIDDMKII---------NASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ LV + + + S +E +T R+ + D + +
Sbjct: 130 QRAAFRLVDFKEPTTVLQMRVDRKKHISPKEGWGQVTCRLCSERQLLVVDAKGNEVEAKA 189
Query: 201 EIFGKVID---IWTFVRNIPPSNPNWVLISTKL 230
+ + F S W L +
Sbjct: 190 DEDATTAQNVTVGVFEAFFGDSAGRWRLALVQE 222
>gi|116053679|ref|YP_794006.1| hypothetical protein PA14_72930 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296392393|ref|ZP_06881868.1| hypothetical protein PaerPAb_29757 [Pseudomonas aeruginosa PAb1]
gi|115588900|gb|ABJ14915.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 285
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
ILL A + F+ + ++ ++ + +R+ + G
Sbjct: 98 MLDILLIALVA-FIAFRFIAA--RR--RQQNQGQPAMAGHAPMQREMPAQAPIFGGATAA 152
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL 129
+ + + + F+ + F+ AR + ++ + ++ I +
Sbjct: 153 AAVAPSPVINAPSW--------------FNEERFVGAAREHFMSLQQHWDANEMDKIAEF 198
Query: 130 VDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
V ++ Q R +S+ + +++ + + T+ G ++ +
Sbjct: 199 VTPQMLQWLKQ---ERAEIGDAYQSTYIDNLVVQLDGVDDQADKTIATLTFSGVSKTSRF 255
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
D+ + W R + P W++ +
Sbjct: 256 DQGEA-----------FSESWRMERAQGENQP-WLVAGIRQ 284
>gi|324518594|gb|ADY47149.1| 39S ribosomal protein L45 [Ascaris suum]
Length = 373
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST----RKSNEKNVK 153
FDPK F A + Y + + K + + + + E+
Sbjct: 188 FDPKLFGATADSIYVEAHKALMARDKVMLHKYITEHAFVKMWPDVENGSVVWEMVEQKEP 247
Query: 154 SSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWT 211
S +V I ++ + + +T+R+ A YDK LI V++
Sbjct: 248 SRVVAIR---CSDSPYKSGNDIAQLTVRMHTVQKLAIYDKFGRLILGSEVEPKAVVEYVV 304
Query: 212 FVRNIPPSNPNWVL 225
F +I + W L
Sbjct: 305 FENHIASLDGAWRL 318
>gi|226945262|ref|YP_002800335.1| hypothetical protein Avin_31970 [Azotobacter vinelandii DJ]
gi|226720189|gb|ACO79360.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 104
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN--ASIEENTVYITIRIVGQ 183
+ +L+D Y F +L+ R ++ + GI +++ + + I V +
Sbjct: 13 LRELLDDDSYAAFQKTLAERLDAGDVIEGT-GGIRKVRVASKGHGKRGGSRVIYYHFVSE 71
Query: 184 -----FISASYDKDNLLISSDPEIFGKVIDIW 210
+ ++ + L + + + ++I+ W
Sbjct: 72 SQIALLLIYPKNEKDDLTADERKALKRIIETW 103
>gi|255940336|ref|XP_002560937.1| Pc16g06000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585560|emb|CAP93270.1| Pc16g06000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 506
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R+ Y ++D++ +G V ++ + +
Sbjct: 342 AENETAMVIKKFREIDPNFQMEPFLREMRD-YMLPEVLDAYVKGDVETLKLWLSDAQFHV 400
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ I + I +A I + + Q I K
Sbjct: 401 YAALAKQYTTAGLKSDGRILDIRGVDISHARILDPGDIPVFVVTCRTQEIHVYRKIKTGE 460
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 461 LAAGTDDKVQLV----TYAIGLTRIPDEVNNPETRGWRLIELQKA 501
>gi|148667637|gb|EDL00054.1| mCG113908 [Mus musculus]
Length = 295
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 16/122 (13%)
Query: 28 RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKV 87
R +LG+ E P + R T + +++ I + +N V
Sbjct: 77 RSLLGR---VEHPPALA-----SLPASPSRSYSTEEQPQQRQRTRMI--ILGFSNPINWV 126
Query: 88 MRDIVSV------YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
I + +F +F A+ ++ + + K +E+LV V Q +
Sbjct: 127 RTRIYAFLIWAYFDKEFSIAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLQILKEK 186
Query: 142 LS 143
++
Sbjct: 187 VT 188
>gi|50307591|ref|XP_453775.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642909|emb|CAH00871.1| KLLA0D16214p [Kluyveromyces lactis]
Length = 418
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 47/146 (32%), Gaps = 6/146 (4%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
T +V + F+ +DF R Y I++++ +G +++ Y
Sbjct: 253 AETESARVYGQFKMMDPTFNTEDFTKHLRE-YIIPEILEAYVKGDEAVLKQWFSEAPYNV 311
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQFISASYD-KDNL 194
+ + E ++ I ++I++A + + + + Q I K
Sbjct: 312 YAAQQKQFREQELFADGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGE 371
Query: 195 LISSDPEIFGKVIDIWTFVRNIPPSN 220
+ + F R+ +
Sbjct: 372 IAAGAESSILMSSYAMVFTRDPETVD 397
>gi|145587094|ref|NP_001074650.1| hypothetical protein LOC68115 precursor [Mus musculus]
gi|81896109|sp|Q8BHE8|CB047_MOUSE RecName: Full=Uncharacterized protein C2orf47 homolog,
mitochondrial; Flags: Precursor
gi|26339158|dbj|BAC33250.1| unnamed protein product [Mus musculus]
gi|26347797|dbj|BAC37547.1| unnamed protein product [Mus musculus]
gi|48735412|gb|AAH71241.1| RIKEN cDNA 9430016H08 gene [Mus musculus]
Length = 291
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 16/122 (13%)
Query: 28 RGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKV 87
R +LG+ E P + R T + +++ I + +N V
Sbjct: 73 RSLLGR---VEHPPALA-----SLPASPSRSYSTEEQPQQRQRTRMI--ILGFSNPINWV 122
Query: 88 MRDIVSV------YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
I + +F +F A+ ++ + + K +E+LV V Q +
Sbjct: 123 RTRIYAFLIWAYFDKEFSIAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLQILKEK 182
Query: 142 LS 143
++
Sbjct: 183 VT 184
>gi|332528579|ref|ZP_08404561.1| import inner membrane translocase, subunit [Hylemonella gracilis
ATCC 19624]
gi|332041895|gb|EGI78239.1| import inner membrane translocase, subunit [Hylemonella gracilis
ATCC 19624]
Length = 247
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 12/138 (8%), Positives = 48/138 (34%), Gaps = 19/138 (13%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK--SNEKNVKS 154
FD + FL A++++ + ++ + + + ++ + + + L+ R+ S+ + +
Sbjct: 123 GFDVESFLKVAKSNFIHLQAAWDKADMVTLRSMMTDEMLAEISAQLAERERLSSGEPNLT 182
Query: 155 SLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW--TF 212
+ + +++ ++ ++ ++W T
Sbjct: 183 EVQMLQ-AQLLGIEDLGGEYMASVEFS-----------GMVREDRHSGPSPFREVWNMTK 230
Query: 213 VRNIPPSNPNWVLISTKL 230
R+ W++ +
Sbjct: 231 PRD-GSRG--WLVAGVQA 245
>gi|324516912|gb|ADY46671.1| 39S ribosomal protein L45 [Ascaris suum]
gi|324517061|gb|ADY46715.1| 39S ribosomal protein L45 [Ascaris suum]
gi|324517081|gb|ADY46721.1| 39S ribosomal protein L45 [Ascaris suum]
Length = 379
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 98 FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST----RKSNEKNVK 153
FDPK F A + Y + + K + + + + E+
Sbjct: 188 FDPKLFGATADSIYVEAHKALMARDKVMLHKYITEHAFVKMWPDVENGSVVWEMVEQKEP 247
Query: 154 SSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWT 211
S +V I ++ + + +T+R+ A YDK LI V++
Sbjct: 248 SRVVAIR---CSDSPYKSGNDIAQLTVRMHTVQKLAIYDKFGRLILGSEVEPKAVVEYVV 304
Query: 212 FVRNIPPSNPNWVL 225
F +I + W L
Sbjct: 305 FENHIASLDGAWRL 318
>gi|303324399|ref|XP_003072187.1| Tim44-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111897|gb|EER30042.1| Tim44-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|320037223|gb|EFW19161.1| mitochondrial import inner membrane translocase subunit TIM44
[Coccidioides posadasii str. Silveira]
Length = 533
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G ++ + +
Sbjct: 369 AENETAMVIKKFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDAETLKLWLSDAQFHV 427
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + ++ I + I +A + E I + IV Q + + K N
Sbjct: 428 YAALAKQYTTAGLKSDGRILDIRHVDISHARMLEP-GDIPVFIVTCRTQEVHVYRNAKTN 486
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 487 ELAAGMEDKVQLVT 500
>gi|119173698|ref|XP_001239255.1| hypothetical protein CIMG_10277 [Coccidioides immitis RS]
Length = 533
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 8/134 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G ++ + +
Sbjct: 369 AENETAMVIKKFRQMDPNFQIEPFLREMRE-YILPEVLDAYVKGDAETLKLWLSDAQFHV 427
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIV---GQFISASYD-KDN 193
+ + ++ I + I +A + E I + IV Q + + K N
Sbjct: 428 YAALAKQYTTAGLKSDGRILDIRHVDISHARMLEP-GDIPVFIVTCRTQEVHVYRNAKTN 486
Query: 194 LLISSDPEIFGKVI 207
L + + V
Sbjct: 487 ELAAGMEDKVQLVT 500
>gi|307703104|ref|ZP_07640051.1| hypothetical protein SMSK23_0938 [Streptococcus oralis ATCC 35037]
gi|307623497|gb|EFO02487.1| hypothetical protein SMSK23_0938 [Streptococcus oralis ATCC 35037]
Length = 234
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD F++ + Y + ++ E +++ L + +Y + L
Sbjct: 42 AISRVKYGDPNFDANAFISWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSTQLEDHI 101
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFG 204
+ V I++++I + + + + D + +I DP+
Sbjct: 102 RAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSTLRDYVIDDETRRVIEGDPK--- 158
Query: 205 KVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 159 --KDLFTVYQLNFIRQHGS 175
>gi|306828965|ref|ZP_07462157.1| NinF protein [Streptococcus mitis ATCC 6249]
gi|304429143|gb|EFM32231.1| NinF protein [Streptococcus mitis ATCC 6249]
Length = 238
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD F++ + Y + ++ E +++ L + +Y + L
Sbjct: 46 AISRVKYGDPNFDANAFISWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSTQLEDHI 105
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFG 204
+ V I++++I + + + + D + +I DP+
Sbjct: 106 RAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSTLRDYVIDDETRRVIEGDPK--- 162
Query: 205 KVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 163 --KDLFTVYQLNFIRQHGS 179
>gi|293364855|ref|ZP_06611572.1| hypothetical protein HMPREF8579_0701 [Streptococcus oralis ATCC
35037]
gi|291316305|gb|EFE56741.1| hypothetical protein HMPREF8579_0701 [Streptococcus oralis ATCC
35037]
Length = 318
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD F++ + Y + ++ E +++ L + +Y + L
Sbjct: 126 AISRVKYGDPNFDANAFISWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSTQLEDHI 185
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFG 204
+ V I++++I + + + + D + +I DP+
Sbjct: 186 RAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSTLRDYVIDDETRRVIEGDPK--- 242
Query: 205 KVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 243 --KDLFTVYQLNFIRQHGS 259
>gi|224823518|ref|ZP_03696627.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
gi|224603973|gb|EEG10147.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
Length = 302
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/194 (9%), Positives = 54/194 (27%), Gaps = 19/194 (9%)
Query: 37 NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT 96
+ + + + + S P + +
Sbjct: 127 FRRKAGNPAGQLPQAAGVPNGMAQEAARFEPIPKIGSGFGTAPSYGGAPMAASSLARLPD 186
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSL 156
+ +FL +A+ ++ + + I K + +++ ++ +
Sbjct: 187 GTETPNFLRQAKATFLHLQSLNTPDSLEEIRKYLTPDLFEALRADIAGNDDVADFPQL-- 244
Query: 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNI 216
D ++I A E ++R G +S + + + W +V++
Sbjct: 245 ----DCQLIEAVEEGGRYIASVRFSGS-VSETVNA----------AAVPFGETWHYVKD- 288
Query: 217 PPSNPNWVLISTKL 230
+ W+L +
Sbjct: 289 -KNGSRWLLAGIQQ 301
>gi|224086853|ref|XP_002186709.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata]
Length = 182
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 15/117 (12%)
Query: 115 VDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV-GIDDMKIINASIEENT 173
+F + + LV R Y D R + K ++ V ++ ++++ E
Sbjct: 37 QLAFNK---QKLHSLVTERCYPDMV-----RGNRYKTIRWRFVESLEPPRVVHVRCEGIL 88
Query: 174 ------VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWV 224
+T+R+ + I A YD+ L+ EI V++ F R + W
Sbjct: 89 NRGNLYGQVTVRMHSRQILAIYDRFGRLMYGGEEIPKDVLEYVVFERYLVNPYGTWR 145
>gi|327404559|ref|YP_004345397.1| hypothetical protein Fluta_2575 [Fluviicola taffensis DSM 16823]
gi|327320067|gb|AEA44559.1| hypothetical protein Fluta_2575 [Fluviicola taffensis DSM 16823]
Length = 483
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI 164
+ S+ A+ ++ E + + K + VYQ F K ++ S V I D+ +
Sbjct: 128 EKVSTSFMALQAAWEEQDLSKVRKWMSDGVYQRFTAQFIMMKQLTQSNTLSNVRIKDVSV 187
Query: 165 INASIEE--NTVYITIRIVGQ--FISASYDKDNLLISSDPEIFGKVIDIWTF 212
++ + + I+I FIS Y + N D + +IWTF
Sbjct: 188 MDIRTDGEYQSADISITFSMDDRFISEKYPELNESYKGDSD-----TEIWTF 234
>gi|45187755|ref|NP_983978.1| ADL118Cp [Ashbya gossypii ATCC 10895]
gi|44982516|gb|AAS51802.1| ADL118Cp [Ashbya gossypii ATCC 10895]
Length = 418
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 6/129 (4%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQD 137
T +V + F+ ++F R Y +++++ +G +++ Y
Sbjct: 253 AETESARVFAQFKLLDPTFNTEEFTKHLRE-YIIPEVLEAYVKGDEQVLKQWFSEAPYNV 311
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE--NTVYITIRIVGQFISASYDK-DNL 194
++ + E ++ I ++II+A + + I + Q I
Sbjct: 312 YSAQQKQIRQQELFADGRILDIRGVEIISAKLLPPQDVPAIVVGCRAQEIHLFRKATTGE 371
Query: 195 LISSDPEIF 203
+ +
Sbjct: 372 IAAGHESNI 380
>gi|242767716|ref|XP_002341423.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724619|gb|EED24036.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Talaromyces stipitatus ATCC 10500]
Length = 507
Score = 43.7 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 55/165 (33%), Gaps = 6/165 (3%)
Query: 48 KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
+ +FS +D ++ F +V++ + F + FL E
Sbjct: 311 QRLFSLKDTYNESENPLISTARSISDRVAGFFAENETARVIKKFREMDPSFQLEPFLREM 370
Query: 108 RNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165
R Y ++D++ +G + ++ + + ++ + ++ I + I
Sbjct: 371 RE-YILPEVLDAYVKGDIETLKLWLSDAQFSVYSALAQQYTTLGMKSDGRILDIRGVDIA 429
Query: 166 NASIE--ENTVYITIRIVGQFISASYD-KDNLLISSDPEIFGKVI 207
NA + + + Q + + K N L + + V
Sbjct: 430 NARMLEPGDIPVFVVTCRTQEVHVYRNAKTNELAAGMEDRVQLVT 474
>gi|115391699|ref|XP_001213354.1| hypothetical protein ATEG_04176 [Aspergillus terreus NIH2624]
gi|114194278|gb|EAU35978.1| hypothetical protein ATEG_04176 [Aspergillus terreus NIH2624]
Length = 501
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 18/165 (10%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
V++ + +F + FL E R Y ++D++ +G V ++ + +
Sbjct: 337 AENETAMVIKKFREMDPNFQMESFLREMRE-YILPEVLDAYVKGDVETLKLWLSDAQFHV 395
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTVYITIRIVGQFISASYD-KDNL 194
+ + ++ I + + +A + + + Q + + K
Sbjct: 396 YAALAQQYTTAGLKSDGRILDIRGVDVSHARMLEPGDIPVFVVTCRTQEVHVYKNTKTGE 455
Query: 195 LISSDPEIFGKVIDIWTFVRNIP-----PSNPN---WVLISTKLG 231
L + + V T+ + +NP W LI +
Sbjct: 456 LAAGMEDKVQLV----TYAIGLTRIPEDVNNPETRGWRLIELQKA 496
>gi|312078188|ref|XP_003141630.1| ribosomal protein L45 [Loa loa]
gi|307763207|gb|EFO22441.1| ribosomal protein L45 [Loa loa]
Length = 388
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 7/145 (4%)
Query: 87 VMRDIVSV--YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
M+ I + +F K F A Y + A++K + + +
Sbjct: 197 GMKRIRKRKGFENFSVKTFPATADEIYIEAHRALMTRDKTALQKYITEAAFGKMWPDVEN 256
Query: 145 ----RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ + S +V + + S + I +R+ A YD+ LI
Sbjct: 257 GSVIWELIKHIEPSRVVSVRCADFPHQS-GNDIAQIIVRMYTMQKIALYDRFGRLILGTE 315
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWVL 225
+ V++ F +I + W L
Sbjct: 316 QEAKPVLEYVVFENHIASFDGIWRL 340
>gi|260219921|emb|CBA26937.1| hypothetical protein Csp_G39130 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 263
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
++ DFD F A+ ++ + ++ G + I + ++ + + R++
Sbjct: 183 AAIPADFDRAGFERNAKVNFIRLQAAYDAGNLDDIREFTTPEMFAEIKLDFAEREAV--T 240
Query: 152 VKSSLVGIDDMKII 165
S +V ID +
Sbjct: 241 QTSEVVRIDTTVLE 254
>gi|170591877|ref|XP_001900696.1| Tim44-like domain containing protein [Brugia malayi]
gi|158591848|gb|EDP30451.1| Tim44-like domain containing protein [Brugia malayi]
Length = 389
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 7/145 (4%)
Query: 87 VMRDIVSV--YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
++ I + +F K F A Y + A++K + + +
Sbjct: 197 GIKRIRKRKGFENFSIKTFPATADEIYVEAHKALMTRDKIALQKYITETAFGKMWPDVEN 256
Query: 145 ----RKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDP 200
+ + S +V + + S + I +R+ A YD+ LI
Sbjct: 257 GSVVWELMKHIELSRVVSVRCADFPHQS-GNDIAQIIVRMHTMQKIALYDRFGRLILGTE 315
Query: 201 EIFGKVIDIWTFVRNIPPSNPNWVL 225
V++ F +I + W L
Sbjct: 316 HEAKPVLEYVVFENHIASFDGVWRL 340
>gi|212542915|ref|XP_002151612.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Penicillium marneffei ATCC 18224]
gi|210066519|gb|EEA20612.1| mitochondrial inner membrane translocase subunit TIM44, putative
[Penicillium marneffei ATCC 18224]
Length = 509
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 10/167 (5%)
Query: 48 KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA 107
+ +FS +D ++ F +V++ + F + FL E
Sbjct: 313 QRLFSLKDTYNESENPLISTARSISDRVAGFFAENETARVIKKFREMDPSFQLEPFLREM 372
Query: 108 RNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165
R Y ++D++ +G + ++ + + ++ + ++ I + I
Sbjct: 373 RE-YILPEVLDAYVKGDIETLKLWLSDAQFSVYSALAQQYTTLGMKSDGRILDIRGVDIA 431
Query: 166 NASI----EENTVYITIRIVGQFISASYD-KDNLLISSDPEIFGKVI 207
NA + + IT R Q + + K N L + + V
Sbjct: 432 NARMLEPGDIPVFVITCR--TQEVHVYRNSKTNELAAGMEDRVQLVT 476
>gi|183222654|ref|YP_001840650.1| hypothetical protein LEPBI_I3309 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167781076|gb|ABZ99374.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 874
Score = 42.6 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 23/56 (41%)
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
++ I + FD K F + E V ++ +G + + + V+Q F+
Sbjct: 515 FQSILSKIQNEDPSFDFKQFKEKVIFITETTVSAWDKGNMEPARNFISAAVFQRFS 570
>gi|189912687|ref|YP_001964242.1| hypothetical protein LBF_3195 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777363|gb|ABZ95664.1| Hypothetical protein LBF_3195 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
Length = 897
Score = 42.6 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 23/56 (41%)
Query: 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
++ I + FD K F + E V ++ +G + + + V+Q F+
Sbjct: 538 FQSILSKIQNEDPSFDFKQFKEKVIFITETTVSAWDKGNMEPARNFISAAVFQRFS 593
>gi|218506347|ref|ZP_03504225.1| putative import inner membrane translocase protein, TIM family
[Rhizobium etli Brasil 5]
Length = 88
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 148 NEKNVKSSLVGIDDMKIINASIEENTVYITI--RIVGQFISASYDKDNLLISSDPEIFGK 205
N + S V + I A E+ Y T+ R D ++S D +
Sbjct: 2 NGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDS-GRVVSGDDRRPSE 60
Query: 206 VIDIWTFVRNIPPSNPNWVLISTK 229
+IWTFVR W L + +
Sbjct: 61 STEIWTFVRKPGGD---WKLAAIQ 81
>gi|126326787|ref|XP_001379521.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 282
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 38/113 (33%), Gaps = 2/113 (1%)
Query: 34 KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
+ +P G + +++ + + P+ +V ++
Sbjct: 64 RLSRRRPLLGPGPCPAPPERGYSSAEEQSPPPRQQTKVMYLGLFNPVVWLRTRVYAFLIW 123
Query: 94 V--YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
+F+ +F A+ ++ + + K +E+LV V Q + ++
Sbjct: 124 AYFDQEFNIAEFTVGAKQAFAHVSKLLSQCKFDLLEELVTKEVLQVLKEKVAA 176
>gi|224055461|ref|XP_002191301.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 246
Score = 42.6 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 23/48 (47%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+F ++F A+ ++ + + K+ +E+LV + V Q + +
Sbjct: 90 DQEFSIEEFTRGAKQAFSVVSKLLSQRKLDLLEELVSAEVLQVLKEKI 137
>gi|194217042|ref|XP_001501754.2| PREDICTED: similar to Mitochondrial ribosomal protein L45 [Equus
caballus]
Length = 304
Score = 42.2 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 24/207 (11%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK------ 86
+K G P ++ +G + + S L RL K
Sbjct: 61 RKAGLVIPPERLERPIHLACTAGIFDAYVPPEGDARVSSLSKEGLARRAERLKKNVASQL 120
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST-- 144
+R I +F KDF +A+N + + L + +
Sbjct: 121 SIRRIRECDANFKIKDFPEKAKNIFIEAHLCLNNSDSDQLHTL---------GNXIPDMV 171
Query: 145 RKSNEKNVKSSLVG------IDDMKIINASIEENT-VYITIRIVGQFISASYDKDNLLIS 197
K V+ S V + ++ N + N IT+R+ + A YD+ L+
Sbjct: 172 WDLKYKTVRWSFVESLEPPLVVQVRCSNLLNQGNMYGQITVRMHTRQTLAIYDRFGRLMY 231
Query: 198 SDPEIFGKVIDIWTFVRNIPPSNPNWV 224
++ V++ F +++ +W
Sbjct: 232 GQEDVPKDVLEYVVFEKHLVNPYGSWR 258
>gi|51948470|ref|NP_001004251.1| hypothetical protein LOC301418 precursor [Rattus norvegicus]
gi|81884505|sp|Q6AY04|CB047_RAT RecName: Full=Uncharacterized protein C2orf47 homolog,
mitochondrial; Flags: Precursor
gi|50925809|gb|AAH79246.1| Similar to hypothetical protein FLJ22555 [Rattus norvegicus]
gi|149046128|gb|EDL99021.1| similar to hypothetical protein FLJ22555 [Rattus norvegicus]
Length = 291
Score = 42.2 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 21/49 (42%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V Q + ++
Sbjct: 136 DKEFSIAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLQVLKEKVA 184
>gi|326430800|gb|EGD76370.1| hypothetical protein PTSG_01070 [Salpingoeca sp. ATCC 50818]
Length = 267
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 74/209 (35%), Gaps = 39/209 (18%)
Query: 45 FSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT-------- 96
G+ E + +I++ P T + +R + +
Sbjct: 51 AQGRRGGPVAAEPATTLPPLSCQCRAYSTISKQRPDLTPVG-FLRSLRIRWQLYNLRKPW 109
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKL---VDSRVYQDFNDSLSTRKSNEKNVK 153
FDP +F+ AR +E + +G + +++ + + VY++ R+ +++
Sbjct: 110 GFDPDEFIQGARMVWEQLHAIVRDGDMESLQSMKRSMTPLVYRELKH--RAREREDESHH 167
Query: 154 SSLVGIDDMKII----NASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDI 209
++D II N S +E + I + + ++ + + D+ + +
Sbjct: 168 KLPAVLEDAHIINVFGNISSQEIRLSILVEFLARY-TPTEDERDDFWD---------LQQ 217
Query: 210 WTFV------RNIP-PSNP----NWVLIS 227
W F R+ ++P W L S
Sbjct: 218 WVFETPILTFRDEGYATDPVQELTWTLTS 246
>gi|331242860|ref|XP_003334075.1| hypothetical protein PGTG_15619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313065|gb|EFP89656.1| hypothetical protein PGTG_15619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 319
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 17/153 (11%), Positives = 43/153 (28%), Gaps = 41/153 (26%)
Query: 107 ARNSYEAIVDS--------FFEGKVHAIEKLVDSRVYQDFNDSLSTR------------- 145
A +Y I+ + F + ++K + + + F R
Sbjct: 159 ADEAYGTIILAHQTVTSGSFED---PQVKKFLHPSMVE-FLQEKRERLLRSYSPSHLITW 214
Query: 146 -------------KSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKD 192
K + + +V + V I +R D+
Sbjct: 215 TKHSPAPEAGKKGKQAQPEKELEIVAMRAAPFDQG---GTVVQIAVRFKSLQSLEIRDER 271
Query: 193 NLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
LL+ +++ + F + + ++ ++ L
Sbjct: 272 GLLVFGSHSKPQPIMEYFVFQKRMGQTDQSFRL 304
>gi|91085613|ref|XP_969487.1| PREDICTED: similar to Juvenile hormone esterase binding protein 29
CG3776-PA [Tribolium castaneum]
gi|270010037|gb|EFA06485.1| hypothetical protein TcasGA2_TC009382 [Tribolium castaneum]
Length = 260
Score = 41.8 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKSNE 149
DF+ DF+ ++ + E + EG V A++ LV + +++ R+
Sbjct: 102 DRDFNLPDFVVGSKKAVEVVSKKIAEGNVKALDGLVTEDILPALQRAVTLMSLSQREQIA 161
Query: 150 KNVKS 154
V+
Sbjct: 162 VEVED 166
>gi|85112444|ref|XP_964347.1| hypothetical protein NCU01983 [Neurospora crassa OR74A]
gi|28926125|gb|EAA35111.1| hypothetical protein NCU01983 [Neurospora crassa OR74A]
gi|38567071|emb|CAE76368.1| hypothetical protein [Neurospora crassa]
Length = 281
Score = 41.8 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 27/139 (19%)
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGI-DDMKIIN 166
+ + + ++ G +EK+VDS +Y ++ R + LV + +I++
Sbjct: 125 KALHRQMNEAIASGDAEMLEKIVDSYLYVPLAVNIEQRPK-GRTCTWELVRYNKEPRIVS 183
Query: 167 AS---IEENTV----YITIRIVGQFISASYDKDNLLISSDPEIFGKVI----------DI 209
++ +T+ I + + ++ + V +
Sbjct: 184 HKIFPLQGTKDKLLWQVTVSIASRQR-VVEHERGRVVPGSEKELDLVENVVIGTMISNET 242
Query: 210 WTFVRNIPPSNPNWVLIST 228
W + W +IST
Sbjct: 243 W-------ATQNAWKIIST 254
>gi|313899741|ref|ZP_07833244.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312955356|gb|EFR37021.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 273
Score = 41.8 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 12/110 (10%), Positives = 39/110 (35%), Gaps = 2/110 (1%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166
+ Y + D++ KV ++ + +Y+ + L+ + + + + ++
Sbjct: 138 VEDIYYHVQDAWTNAKVEDLKPYLTEHLYEQWKMRLTWMELRNERNVLDNIKLRRSAVVG 197
Query: 167 AS--IEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVR 214
+++ + + I G I + + I+ ++ W R
Sbjct: 198 IQDYRDDSQDFCWLYIEGSMIDYTINSQTQTITEGKRKTSTFVEYWKLQR 247
>gi|302412056|ref|XP_003003861.1| mitochondrial inner membrane translocase subunit TIM44
[Verticillium albo-atrum VaMs.102]
gi|261357766|gb|EEY20194.1| mitochondrial inner membrane translocase subunit TIM44
[Verticillium albo-atrum VaMs.102]
Length = 544
Score = 41.4 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 85 NKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+V++ + +F + FL E R Y ++D++ +G V ++ + Y ++
Sbjct: 385 AQVIKKFREMDPNFKMEPFLTELRE-YILPEVLDAYVKGDVPTLKLWLSEAQYSVYDALT 443
Query: 143 STRKSNEKNVKSSLVGIDDMKIINASI----EENTVYITIRIVGQFISASYD-KDNLLIS 197
++ I + I A + + IT R Q + + K N L +
Sbjct: 444 KQYLKAGMKSDGRILDIRHVDIAKARMLEPGDIPVFVITCR--TQEVHVYRNAKTNELAA 501
Query: 198 SDPEIFGKVI 207
+ V
Sbjct: 502 GMEDKVQLVT 511
>gi|315612608|ref|ZP_07887521.1| NinF protein [Streptococcus sanguinis ATCC 49296]
gi|315315589|gb|EFU63628.1| NinF protein [Streptococcus sanguinis ATCC 49296]
Length = 241
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
+ + + +FD + F + + Y + ++ E +++ L + +Y + L
Sbjct: 48 RAISLVKYGDPNFDAEAFTSWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSAQLEDH 107
Query: 146 KSNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIF 203
+ V I++++I + + + + D + +I DP+
Sbjct: 108 IRAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSILRDYVIDDETRRVIEGDPK-- 165
Query: 204 GKVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 166 ---KDLFTVYQLNFIRQHGS 182
>gi|170086684|ref|XP_001874565.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649765|gb|EDR14006.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 397
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 10/170 (5%)
Query: 40 PFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFD 99
P S + E +++ + + +E +VMR + + F+
Sbjct: 201 PVLRSLSELRQAYDQSENPVVSSMRSVTQTVGSWFDE-----NETAQVMRMMKVLDPAFN 255
Query: 100 PKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157
+ F E R Y +VD++ A++ Y ++ S ++
Sbjct: 256 REGFERELRE-YIVPEVVDAYLSADQEALKAWCGEATYNVLWATMEQYLRQGLISDSKVL 314
Query: 158 GIDDMKIINASIEENTVYI-TIRIVGQFISASYD-KDNLLISSDPEIFGK 205
I + + + I EN + + I Q + + K ++ +
Sbjct: 315 DIRQVDVSDGKILENDIPVFVISFATQEVLLFRNAKTGEIMVGADNKVEQ 364
>gi|56477363|ref|YP_158952.1| hypothetical protein ebA3408 [Aromatoleum aromaticum EbN1]
gi|56313406|emb|CAI08051.1| hypothetical protein ebA3408 [Aromatoleum aromaticum EbN1]
Length = 217
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 6/83 (7%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
++F I + +L TG E P S + D + D++++
Sbjct: 111 VVFFVIGAAILYRLYS-----TGGE-PASVAQDASPSTAAVDATLRVVPPSSAPADDIEA 164
Query: 74 INELFPIGTRLNKVMRDIVSVYT 96
++ P + + ++
Sbjct: 165 VSVAPPPVPAKSSANEEALAAQP 187
>gi|332209708|ref|XP_003253955.1| PREDICTED: uncharacterized protein C2orf47, mitochondrial-like
[Nomascus leucogenys]
Length = 291
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 136 DKEFSIAEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHALKEKVT 184
>gi|118093426|ref|XP_421922.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 248
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL--DSINELFPIGTRLNKVMRDIVSVYT 96
P G S G+G ++ + N L + TR ++ + +
Sbjct: 35 PPLPGPLSALPPARFASSGPQGPEGEGPQRRVVVVRITNPLAWLRTRFYYLLIRLY-FDS 93
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+F ++F A+ ++ + + K+ +E LV + V Q + +
Sbjct: 94 EFSIEEFTRGAKQAFSVVSQLLSQRKLDLLEGLVSAEVLQMLKEKI 139
>gi|322374848|ref|ZP_08049362.1| hypothetical protein HMPREF0849_00564 [Streptococcus sp. C300]
gi|321280348|gb|EFX57387.1| hypothetical protein HMPREF0849_00564 [Streptococcus sp. C300]
Length = 318
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD + F + + Y + ++ E +++ L + +Y + L
Sbjct: 126 AISRVKYGDPNFDAEAFTSWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSTQLEDHI 185
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFG 204
+ V I++++I + + + + D + ++ DP+
Sbjct: 186 RAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSTLRDYVIDDETRRVLEGDPK--- 242
Query: 205 KVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 243 --KDLFTVYQLNFIRQHGS 259
>gi|306825787|ref|ZP_07459126.1| NinF protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432148|gb|EFM35125.1| NinF protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 238
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD + F + + Y + ++ E +++ L + +Y + L
Sbjct: 46 AISRVKYGDPNFDAEAFTSWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSTQLEDHI 105
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFG 204
+ V I++++I + + + + D + ++ DP+
Sbjct: 106 RAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSTLRDYVIDDETRRVLEGDPK--- 162
Query: 205 KVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 163 --KDLFTVYQLNFIRQHGS 179
>gi|301760151|ref|XP_002915883.1| PREDICTED: uncharacterized protein C2orf47 homolog,
mitochondrial-like [Ailuropoda melanoleuca]
gi|281353912|gb|EFB29496.1| hypothetical protein PANDA_003910 [Ailuropoda melanoleuca]
Length = 288
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 11/117 (9%)
Query: 36 GNEKP---FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIV 92
G ++P G + F RG + + + I + +N V I
Sbjct: 67 GPQRPLLSPPGLPAAFSAFPAYPRRGYSAEEQPQPRQKTKMI--ILGFSNPINWVRTRIY 124
Query: 93 SV------YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+ +F +F A+ ++ + + K +E+LV V + ++
Sbjct: 125 AFLIWAYFDQEFSIAEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHVLKEKVT 181
>gi|74005545|ref|XP_545584.2| PREDICTED: similar to CG3776-PA [Canis familiaris]
Length = 289
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 36 GNEKPFSGFFSGKYVFS--KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
G +P + S D R + + + + + +N V I +
Sbjct: 68 GPPRPLLSPPGPRAALSAFPADARRTYSAEEPPQPRQKTKMI-ILGFSNPINWVRTRIYA 126
Query: 94 V------YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 127 FLIWAYFDQEFSIAEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHVLKEKVT 182
>gi|239582772|ref|NP_078796.2| hypothetical protein LOC79568 precursor [Homo sapiens]
gi|74730963|sp|Q8WWC4|CB047_HUMAN RecName: Full=Uncharacterized protein C2orf47, mitochondrial;
Flags: Precursor
gi|17389900|gb|AAH17959.1| Chromosome 2 open reading frame 47 [Homo sapiens]
gi|62988776|gb|AAY24163.1| unknown [Homo sapiens]
gi|119590601|gb|EAW70195.1| hypothetical protein FLJ22555, isoform CRA_a [Homo sapiens]
gi|119590602|gb|EAW70196.1| hypothetical protein FLJ22555, isoform CRA_a [Homo sapiens]
gi|312151240|gb|ADQ32132.1| chromosome 2 open reading frame 47 [synthetic construct]
Length = 291
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 136 DKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHALKEKVT 184
>gi|10438983|dbj|BAB15393.1| unnamed protein product [Homo sapiens]
Length = 291
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 136 DKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHALKEKVT 184
>gi|163846374|ref|YP_001634418.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163667663|gb|ABY34029.1| extracellular solute-binding protein family 5 [Chloroflexus
aurantiacus J-10-fl]
Length = 612
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 20/137 (14%)
Query: 4 IKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD-ERGIITL 62
M S FLI++ + G++T +P + + + V + +
Sbjct: 3 SHMVSRLFLIMIVLLLAA---------CGQQTSQSQPPTLPSAQETVTAGPTVAPQPTAV 53
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVM--RDIVSVYTDFD--PKDFLNEARNSYEAIVDSF 118
+ ++ P ++ + I ++ KDF N A I++
Sbjct: 54 PEATAVPASTAVPTAIPPSGGKLTILSWQAITTLNPHLATGVKDF-NGAT----VILEPL 108
Query: 119 FE-GKVHAIEKLVDSRV 134
+ + + + +
Sbjct: 109 ARYNERDELVPFLAAEI 125
>gi|19353157|gb|AAH24945.1| 9430016H08Rik protein [Mus musculus]
Length = 182
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 21/49 (42%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V Q + ++
Sbjct: 27 DKEFSIAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLQILKEKVT 75
>gi|222524140|ref|YP_002568611.1| extracellular solute-binding protein family 5 protein [Chloroflexus
sp. Y-400-fl]
gi|222448019|gb|ACM52285.1| extracellular solute-binding protein family 5 [Chloroflexus sp.
Y-400-fl]
Length = 612
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 20/137 (14%)
Query: 4 IKMDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRD-ERGIITL 62
M S FLI++ + G++T +P + + + V + +
Sbjct: 3 SHMVSRLFLIMIVLLLAA---------CGQQTSQSQPPTLPSAQETVTAGPTVAPQPTAV 53
Query: 63 GKGKKKDNLDSINELFPIGTRLNKVM--RDIVSVYTDFD--PKDFLNEARNSYEAIVDSF 118
+ ++ P ++ + I ++ KDF N A I++
Sbjct: 54 PEATAVPASTAVPTAIPPSGGKLTILSWQAITTLNPHLATGVKDF-NGAT----VILEPL 108
Query: 119 FE-GKVHAIEKLVDSRV 134
+ + + + +
Sbjct: 109 ARYNERDELVPFLAAEI 125
>gi|218506541|ref|ZP_03504419.1| hypothetical protein RetlB5_02514 [Rhizobium etli Brasil 5]
Length = 22
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 212 FVRNIPPSNPNWVLISTKLGE 232
F R+ +PNW L++T+
Sbjct: 1 FARDTRSRDPNWKLVATESEH 21
>gi|76779894|gb|AAI06212.1| LOC733342 protein [Xenopus laevis]
Length = 228
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+F ++F + A+ ++ + + K A++ L+ S + +D +
Sbjct: 72 DREFTIEEFTDGAKQAFTLVSKLLSQCKFDALQNLISSELLEDIKEK 118
>gi|224126203|ref|XP_002190248.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 182
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+F ++F A+ ++ + + K+ +E+LV + V Q + +
Sbjct: 27 QEFSIEEFTRGAKQAFSVVSKLLSQRKLDLLEELVSAEVLQVLKEKI 73
>gi|47937708|gb|AAH72282.1| LOC432279 protein [Xenopus laevis]
Length = 199
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 24/47 (51%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+F+ ++F + A+ ++ + + K A++ L+ S + QD +
Sbjct: 68 DREFNIEEFTDGAKQAFTLVSKLLSQCKFDALQNLISSELLQDIKEK 114
>gi|281491081|ref|YP_003353061.1| hypothetical protein LLKF_0593 [Lactococcus lactis subsp. lactis
KF147]
gi|281374839|gb|ADA64359.1| Hypothetical protein LLKF_0593 [Lactococcus lactis subsp. lactis
KF147]
Length = 243
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 12/105 (11%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV---GIDDMKIINASIE 170
+ D++ + + A+ + +Y+ L + + V GI K ++
Sbjct: 130 VQDAWDKHDLRALSESYGDNLYEKHEKILQKMSDKGQINHTRSVVLDGITRYK----EVK 185
Query: 171 ENTVYITIRIVG--QFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+N V + + V +S +I+ + + WTF
Sbjct: 186 DNQVEVDLYFVAIDHLVSV---NSGQIIAGNTQERRAFKQRWTFS 227
>gi|118835767|gb|AAI28910.1| LOC733342 protein [Xenopus laevis]
Length = 225
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+F ++F + A+ ++ + + K A++ L+ S + +D +
Sbjct: 69 DREFTIEEFTDGAKQAFTLVSKLLSQCKFDALQNLISSELLEDIKEK 115
>gi|52545739|emb|CAH56348.1| hypothetical protein [Homo sapiens]
Length = 171
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 16 DKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHALKEKVT 64
>gi|112419450|gb|AAI22493.1| LOC733342 protein [Xenopus laevis]
Length = 225
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+F ++F + A+ ++ + + K A++ L+ S + +D +
Sbjct: 69 DREFTIEEFTDGAKQAFTLVSKLLSQCKFDALQNLISSELLEDIKEK 115
>gi|238880462|gb|EEQ44100.1| hypothetical protein CAWG_02360 [Candida albicans WO-1]
Length = 424
Score = 40.2 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 6/127 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T KV++ + + F DF N Y +VD++ + +++ + Y +
Sbjct: 261 TEQAKVVKQLKLMDPSFRLTDFQRTLTN-YIVPEVVDAYIKNDAKVLKEWLSEAPYNVWE 319
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINAS--IEENTVYITIRIVGQFISASYD-KDNLLI 196
+ S ++ I ++I+ + I + Q I K +
Sbjct: 320 ANNKQFIQQGLFSDSRVLDIRGVEIVTCKSLQPNDVPVIVVSCRAQEIHLYRKAKTGEIA 379
Query: 197 SSDPEIF 203
+ +
Sbjct: 380 AGTEDHI 386
>gi|213405048|ref|XP_002173296.1| mitochondrial import inner membrane translocase subunit
[Schizosaccharomyces japonicus yFS275]
gi|212001343|gb|EEB07003.1| mitochondrial import inner membrane translocase subunit
[Schizosaccharomyces japonicus yFS275]
Length = 428
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 51/159 (32%), Gaps = 10/159 (6%)
Query: 54 RDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEA 113
++ I D++ S T ++V+ + F+ + F R E
Sbjct: 237 QETEHPILSSVRDMADSISSFWYRMFSETEASQVVSRFKEIDPSFNSEVFQRYLR---EY 293
Query: 114 IV----DSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
I+ +++ +G A+ + + + + ++ I + I + +
Sbjct: 294 IIPEVSEAYVKGDKEALRTWFSEAPFSVWETTTKEYAKHGVVSAGQVLDIRGVDIASYRM 353
Query: 170 E--ENTVYITIRIVGQFISASYD-KDNLLISSDPEIFGK 205
N + I Q + + K +++ + +
Sbjct: 354 LQPNNIPVMVITFRTQEVHLFKNAKSGEVVAGRNDRIQQ 392
>gi|163915247|ref|NP_001106589.1| hypothetical protein LOC100127804 [Xenopus (Silurana) tropicalis]
gi|160773565|gb|AAI55415.1| LOC100127804 protein [Xenopus (Silurana) tropicalis]
Length = 304
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 23/47 (48%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+F+ ++F + A+ ++ + + K A++ L+ + +D +
Sbjct: 148 DREFNIEEFTDGAKQAFTLVSKLLSQCKFDALQNLISGELLEDIKEK 194
>gi|62825960|gb|AAH94111.1| LOC734150 protein [Xenopus laevis]
Length = 177
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
+F ++F + A+ ++ + + K A++ L+ S + +D +
Sbjct: 21 DREFTIEEFTDGAKQAFTLVSKLLSQCKFDALQNLISSELLEDIKEK 67
>gi|68476333|ref|XP_717816.1| hypothetical protein CaO19.5444 [Candida albicans SC5314]
gi|68476522|ref|XP_717722.1| hypothetical protein CaO19.12899 [Candida albicans SC5314]
gi|46439447|gb|EAK98765.1| hypothetical protein CaO19.12899 [Candida albicans SC5314]
gi|46439548|gb|EAK98865.1| hypothetical protein CaO19.5444 [Candida albicans SC5314]
Length = 424
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 6/127 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T KV++ + + F DF N Y +VD++ + +++ + Y +
Sbjct: 261 TEQAKVVKQLKLMDPSFRLTDFQRTLTN-YIVPEVVDAYIKNDAKVLKEWLSEAPYNVWE 319
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINAS--IEENTVYITIRIVGQFISASYD-KDNLLI 196
+ S ++ I ++I+ + I + Q I K +
Sbjct: 320 ANNKQFIQQGLFSDSRVLDIRGVEIVTCKSLQPNDVPVIVVSCRAQEIHLYRKAKTGEIA 379
Query: 197 SSDPEIF 203
+ +
Sbjct: 380 AGTEDHI 386
>gi|291391992|ref|XP_002712422.1| PREDICTED: juvenile hormone esterase binding protein 29-like
[Oryctolagus cuniculus]
Length = 292
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 137 DKEFSIAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLHVLKEKVT 185
>gi|284044140|ref|YP_003394480.1| import inner membrane translocase subunit Tim44 [Conexibacter
woesei DSM 14684]
gi|283948361|gb|ADB51105.1| import inner membrane translocase subunit Tim44 [Conexibacter
woesei DSM 14684]
Length = 462
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE--ENTV 174
++ + +L+ + +++ L + + ++ ID ++ + + +
Sbjct: 144 AWDARDDARLAQLLVPDLLVEWSRRLDDFARKGWHNRVEVLSIDAIEYLGLTNREGDKDD 203
Query: 175 YITIRIVGQFISASYDKDNLLIS--SDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+T+RI + ++ +++ + + WT + W++ S +
Sbjct: 204 RVTVRISAKLRDYVELRNGMIMKRNESGSDVVALTEFWTLAK--RADGNGWIVASIES 259
>gi|296205193|ref|XP_002749654.1| PREDICTED: uncharacterized protein C2orf47, mitochondrial-like
[Callithrix jacchus]
Length = 290
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 135 DKEFSIAEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHVLKEKVT 183
>gi|302564776|ref|NP_001180825.1| chromosome 2 open reading frame 47 [Macaca mulatta]
Length = 291
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV V + ++
Sbjct: 136 DKEFSIAEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHVLKEKVT 184
>gi|331266951|ref|YP_004326581.1| Tim44 domain superfamily protein [Streptococcus oralis Uo5]
gi|326683623|emb|CBZ01241.1| Tim44 domain superfamily protein [Streptococcus oralis Uo5]
Length = 314
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRK 146
+ + +FD + F + + Y + ++ E +++ L + +Y + L
Sbjct: 122 AISRVKYGDPNFDAEAFTSWVKEVYLKLQVAWTEKNWNSVRALESTSLYSQHSTQLEDHI 181
Query: 147 SNEKNVKSSLVGIDDMKIIN-ASIEENTVYITIRIVGQFISASYDKDN-LLISSDPEIFG 204
+ V I++++I + + + + D + ++ DP+
Sbjct: 182 RAKTTNVLEKVCIENVRIKEFIENPDGNDTLVVILSSILRDYVIDDETRRVLEGDPK--- 238
Query: 205 KVIDIWT-----FVRNIPP 218
D++T F+R
Sbjct: 239 --KDLFTVYQLNFIRQHGS 255
>gi|146309531|ref|YP_001189996.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
mendocina ymp]
gi|145577732|gb|ABP87264.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
mendocina ymp]
Length = 284
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 68/217 (31%), Gaps = 33/217 (15%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDS 73
L+F I F +F L + + + + +
Sbjct: 100 LIFGLIAFLLFRFL-----------------AARRAQQQPQAATAGAPYQREMPNASNAP 142
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
G RL +++ F+ ++F+ R + ++ + ++ I + V +
Sbjct: 143 AAGSNIFGARLASA-APVINAPAWFNEQNFIAAGREHFMSLQQHWDADEMDKIAEFVTPQ 201
Query: 134 VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDN 193
+ + R +S+ ID++++ +++N + A+
Sbjct: 202 LLEFLKR---ERAELGDGFQST--YIDELQVQLDGVDDN---------AEKTIATLTFSG 247
Query: 194 LLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ +S + + W R + P W++ +
Sbjct: 248 VSKTSRFDQGEPFSESWRLERAQGDNQP-WLIAGIRQ 283
>gi|114052406|ref|NP_001040474.1| juvenile hormone esterase binding protein [Bombyx mori]
gi|95103044|gb|ABF51463.1| juvenile hormone esterase binding protein [Bombyx mori]
Length = 243
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS 154
+F +F+ ++++ + + + +E LVD ++S +
Sbjct: 86 DQEFSLNEFIEASKHAVQIVSGALQNSDFKTLEGLVDKDAINALKTAVSQ----LSVSQR 141
Query: 155 SLVGIDDMKIINA 167
L+ I+ I A
Sbjct: 142 QLLAIEKEDIFYA 154
>gi|331230884|ref|XP_003328106.1| mitochondrial import inner membrane translocase subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309307096|gb|EFP83687.1| mitochondrial import inner membrane translocase subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 580
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI----VDSFFEGKVHAIEKLVDSRVYQD 137
T KV+R + V F+ FL + R E I VDSF + + A++ +
Sbjct: 346 TETAKVIRLVKEVDPAFNYDAFLADLR---EFIIPDFVDSFVDNDLQALKMWTSEAAFNV 402
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASI--EENTVYITIRIVGQFISASYDKDNLL 195
+ + + ++ + + I++A + E + + I+ + +
Sbjct: 403 TSAPMKMYLQRGLRPANQIIDLKGIDILSAKVLEERDLPVFIVAFKTHEINCYINPAKRV 462
Query: 196 ISSDPEIFGK 205
+ +
Sbjct: 463 SAKSKSSIEE 472
>gi|112819389|gb|ABI23690.1| juvenile hormone esterase binding protein [Bombyx mori]
Length = 243
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 20/50 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST 144
+F +F+ ++++ + + + +E LVD ++S
Sbjct: 86 DQEFSLNEFIEASKHAVQIVSGALQNSDFKTLEGLVDKDAINALKTAVSQ 135
>gi|189202656|ref|XP_001937664.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984763|gb|EDU50251.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 372
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 101 KDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGID 160
K F A+ YE + +SF G V ++ + ++ R V + G
Sbjct: 165 KQFKYIAKRHYEHVYNSFAAGNVRKLKDTCLPPFLRKIQSQIAVR--GGLRVNWKIHGNI 222
Query: 161 DMKIINASIE------ENTV--YITIRIVGQFISASYDKDNLLISSDPEI 202
+I++ +T + +R+ + S + K +S
Sbjct: 223 AARIVSHRASPLGESHPDTAYRQLVVRLKSKQ-SITRTKSGRKAASSSST 271
>gi|241952497|ref|XP_002418970.1| import inner membrane translocase subunit, mitochondrial precursor,
putative; translocase of the inner mitochondrial
membrane component, putative [Candida dubliniensis CD36]
gi|223642310|emb|CAX42552.1| import inner membrane translocase subunit, mitochondrial precursor,
putative [Candida dubliniensis CD36]
Length = 426
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 6/127 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T KV++ + + F DF N Y +VD++ + +++ + Y +
Sbjct: 263 TEQAKVVKQLKLMDPSFRLTDFQRTLTN-YIVPEVVDAYIKNDAKVLKEWLSEAPYNVWE 321
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINAS--IEENTVYITIRIVGQFISASYD-KDNLLI 196
+ S ++ I + I+ + I + Q I K +
Sbjct: 322 ANNKQFIQQGLFSDSRVLDIRGVDIVTCKSLQPNDVPVIVVSCRAQEIHLYRKAKTGEIA 381
Query: 197 SSDPEIF 203
+ +
Sbjct: 382 AGTEDHI 388
>gi|195586603|ref|XP_002083063.1| GD11914 [Drosophila simulans]
gi|194195072|gb|EDX08648.1| GD11914 [Drosophila simulans]
Length = 267
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 64/172 (37%), Gaps = 15/172 (8%)
Query: 39 KPFSGFFSG-KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSV--- 94
+P S F+ K+D+ +L + + + I + + N + +
Sbjct: 45 QPVSRSFASLPQEQDKKDQNARESLNRLPRLMDFPEIVWPSALNSLKNWITIQFIIRPYF 104
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKS-- 147
++F KDF+ A+ + + + G + +++ LV + + R+
Sbjct: 105 DSEFQLKDFIYGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQLE 164
Query: 148 -NEKNVKSSLVGIDDMKIINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
E ++ S + +A +++ V IT+ V + +S ++ +
Sbjct: 165 IRESDIYLSFPYQVGIMFDDANDKLQKRFVEITMVFHVMRGLSEMRERGEEI 216
>gi|255723518|ref|XP_002546692.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130566|gb|EER30130.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 432
Score = 39.9 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 42/127 (33%), Gaps = 6/127 (4%)
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQDFN 139
T KV++ + + F DF N Y +VD++ + +++ + Y +
Sbjct: 269 TEQAKVVKQLKLMDPSFRLTDFQRTLTN-YIVPEVVDAYVKNDAAVLKEWLSEAPYNVWE 327
Query: 140 DSLSTRKSNEKNVKSSLVGIDDMKIINAS--IEENTVYITIRIVGQFISASYD-KDNLLI 196
+ S ++ I ++I+ + + + Q I K +
Sbjct: 328 ANNKQFIQQGLFSDSRVLDIRGVEIVTCKSLQPNDVPVVVVSCRAQEIHLYRKAKTGEIA 387
Query: 197 SSDPEIF 203
+ +
Sbjct: 388 AGTEDHI 394
>gi|154249339|ref|YP_001410164.1| signal peptidase I [Fervidobacterium nodosum Rt17-B1]
gi|154153275|gb|ABS60507.1| signal peptidase I [Fervidobacterium nodosum Rt17-B1]
Length = 295
Score = 39.9 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 37/120 (30%), Gaps = 13/120 (10%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
+ L++A + + +L E S + D + + ++
Sbjct: 20 TIITLIYAIVAATII-RLY-------VFETMLVPTPSMVPTINVGDRLFVEKVTYSAREP 71
Query: 70 NLDSINELFPI--GTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIE 127
+ I + R +++R F PK+F + + EG V ++
Sbjct: 72 QIGEIVVFYTPFPDERAQQMLRAFDKFMDSFSPKEFKGSVKYVKRLVAK---EGDVITLK 128
>gi|46129419|ref|XP_389061.1| hypothetical protein FG08885.1 [Gibberella zeae PH-1]
Length = 280
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDD----- 161
A+N Y ++ +F G I L + + ++ R++ + V L+ ++
Sbjct: 114 AKNMYMEMLGAFAAGDKTTINNLCLGQFGKKLTAAID-RRNAGERVTFELLSLNKSLLYP 172
Query: 162 -------MKIINASIEENTVYITIRIVGQFISASYDK-DNLLISSDPEIFGKVIDIWTFV 213
I + T I I A Y K + LI ++
Sbjct: 173 RVVAHQVHNINPHDKDNCTEQAVIAIASTQRVAKYKKPSDQLIPGS-TKVQDKLEYVVLS 231
Query: 214 RNIPPS---NPNWVLISTKLG 231
R + + W + T
Sbjct: 232 RQVNEKTFQSTPWRIWGTVPA 252
>gi|164656629|ref|XP_001729442.1| hypothetical protein MGL_3477 [Malassezia globosa CBS 7966]
gi|159103333|gb|EDP42228.1| hypothetical protein MGL_3477 [Malassezia globosa CBS 7966]
Length = 489
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 42/130 (32%), Gaps = 4/130 (3%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDF-LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDF 138
+V+R I + F F ++ ++D++ + H + + Y
Sbjct: 324 EENETAQVVRAIKQLDPSFTLSGFTIDLREYVVPEVLDAYHTAQRHLLRQWCGEATYNVL 383
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN--TVYITIRIVG-QFISASYDKDNLL 195
+L ++ + +++I+ I E + I + + + K +
Sbjct: 384 MATLDPYLQRGYIADGRILDLSNIEIVQGKILETGPMPVLVISFQTQELMYFTDPKTREI 443
Query: 196 ISSDPEIFGK 205
I E +
Sbjct: 444 IDGSVEQAIQ 453
>gi|194222446|ref|XP_001917906.1| PREDICTED: similar to Uncharacterized protein C2orf47,
mitochondrial [Equus caballus]
Length = 322
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 19/49 (38%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+ V V + ++
Sbjct: 167 DREFSIAEFSEGAKQAFAHVSKLLSQCKFDLLEEFVAKEVLHVLKEKVT 215
>gi|71021021|ref|XP_760741.1| hypothetical protein UM04594.1 [Ustilago maydis 521]
gi|46100134|gb|EAK85367.1| hypothetical protein UM04594.1 [Ustilago maydis 521]
Length = 567
Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYE--AIVDSFFEGKVHAIEKLVDSRVYQD 137
+V R + + F + F + R Y ++D++ H + + +
Sbjct: 403 EENDFARVTRQMKMLDPSFTMESFQRDLRE-YVVPELIDAYHGAARHLLRQWCGEATFNL 461
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINAS-IEENTVYITIRIVGQFISASYD-KDNLL 195
++ S L+ + +++I+ A ++ N + + Q + D K +
Sbjct: 462 LMATIDPYLSKGYIPHGRLLDLKNVEILQAKILDNNVPVLVVSFTSQELMFFKDPKTAEV 521
Query: 196 ISSD 199
+ +
Sbjct: 522 KAGN 525
>gi|157115451|ref|XP_001658212.1| hypothetical protein AaeL_AAEL007196 [Aedes aegypti]
gi|94469074|gb|ABF18386.1| juvenile hormone esterase-binding protein [Aedes aegypti]
gi|108876910|gb|EAT41135.1| conserved hypothetical protein [Aedes aegypti]
Length = 284
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 28/158 (17%)
Query: 45 FSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS----------- 93
+ + +S + G+G+ L E+ +M+ I +
Sbjct: 68 YGQRCSYSTEAPDELPPRGRGRTLPKLMDFPEIIWP-----SIMKSIKNWIMVHFIIRPY 122
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL-----STRKS- 147
+F +F+ A+ + + + S G++ +++ LVD + D +++ + R
Sbjct: 123 FDREFSLPEFVQGAKQALQVVSASLAGGELKSLDGLVDRQTLNDLKNTIGKMSVAQRYDL 182
Query: 148 --NEKNVKSSL---VGIDDMKIINASIEENTVYITIRI 180
++++ S VG+ + AS ++ V IT+
Sbjct: 183 MVQKEDIYFSFPYQVGVMFDEEDEAS-QKRFVEITMVF 219
>gi|330843779|ref|XP_003293823.1| hypothetical protein DICPUDRAFT_158742 [Dictyostelium purpureum]
gi|325075809|gb|EGC29654.1| hypothetical protein DICPUDRAFT_158742 [Dictyostelium purpureum]
Length = 268
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 26/159 (16%)
Query: 87 VMRDIVSVYT-DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLST- 144
+ + ++ + + FL EA + + + +S +G H + +L F + +
Sbjct: 110 IKSKLKALDRTRYTKRAFLKEAEDMFIKVNESIADGNKHQLNELSS----IQFGEVVEKK 165
Query: 145 -----RKSN----------EKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASY 189
R + KN+ + G +++ + +G +
Sbjct: 166 SGYLNRNKDLKFKWSCNITGKNLLWTRAGQIKTSAKSSTF---FAQNCVEFIGTQSIQVF 222
Query: 190 DKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228
DK N LIS + + K+ I F RN+ + W + S+
Sbjct: 223 DKKNNLISENKDQPFKLEYI--FERNLASTPSMWRVCSS 259
>gi|302921469|ref|XP_003053289.1| hypothetical protein NECHADRAFT_59411 [Nectria haematococca mpVI
77-13-4]
gi|256734229|gb|EEU47576.1| hypothetical protein NECHADRAFT_59411 [Nectria haematococca mpVI
77-13-4]
Length = 278
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKI-- 164
A+ Y ++ +F G I L + + ++ R++ + LV +
Sbjct: 111 AKVMYTEMLTAFAAGDKATINSLCLGQFAKKLTAAID-RRNPTERTSFELVKFNKTLFYP 169
Query: 165 ------INA----SIEENTVYITIRIVGQFISASYDK-DNLLISSDPEIFGKVI 207
++A E +T I I ++ Y K LI ++ K+
Sbjct: 170 RVVAHQVHAVNPYDKENSTEQAVIAIASTQRASKYKKSTGELIPGSTKVQEKIE 223
>gi|299068189|emb|CBJ39408.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 235
Score = 39.1 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 15/147 (10%), Positives = 42/147 (28%), Gaps = 21/147 (14%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDF 98
+P + + ++ + + P+ + ++ R + F
Sbjct: 102 EPNQPGTQPASQATPKPAEPGGSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAKTGYF 161
Query: 99 DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS--- 155
+ A + +G + Q F ++ R+ N
Sbjct: 162 LQVGAYDSAEYAERQ------KGNLA----------MQGFEAKVTQREVNGSTKYRVRLG 205
Query: 156 -LVGIDDMKIINASIEENTVYITI-RI 180
+D+M + + ++ + V T+ R
Sbjct: 206 PFNSLDEMTAVRSRLQASGVESTVIRF 232
>gi|322709552|gb|EFZ01128.1| hypothetical protein MAA_03724 [Metarhizium anisopliae ARSEF 23]
Length = 318
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 40/114 (35%), Gaps = 14/114 (12%)
Query: 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV--------- 157
A+ Y ++++F G + K+ + + ++ R+ ++ V+ +V
Sbjct: 151 AKAMYREMLEAFAAGDKVTLNKICLGEFAKKLSAAID-RRDPKERVRFEVVKYNKGLFYP 209
Query: 158 GIDDMKIINAS-IEEN--TVYITIRIVG-QFISASYDKDNLLISSDPEIFGKVI 207
+ +I + ++ T + I Q S + ++ K+
Sbjct: 210 RLMSHQIHEVNPFDKTMVTEQAVVAIASTQQASKMSAVTGETVPGSLKLQDKIE 263
>gi|116511408|ref|YP_808624.1| hypothetical protein LACR_0635 [Lactococcus lactis subsp. cremoris
SK11]
gi|116107062|gb|ABJ72202.1| hypothetical protein LACR_0635 [Lactococcus lactis subsp. cremoris
SK11]
Length = 158
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173
+ +++ + + ++ ++Y+ L ++ + + I D I++N
Sbjct: 45 VQEAWDKQDLQSLSPFYGDQLYEKHQKVLEKMRNKGQINHTRS-AILDGITRYKEIKDNQ 103
Query: 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+ + V S D +IS + + + W F
Sbjct: 104 FEVDLYFVAIDYLVSIDS-GQIISGNNQYRREFKQRWNFS 142
>gi|156358621|ref|XP_001624615.1| predicted protein [Nematostella vectensis]
gi|156211406|gb|EDO32515.1| predicted protein [Nematostella vectensis]
Length = 289
Score = 38.7 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 55 DERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAI 114
+ I+ D L + + + K + +I + F+ FL E +E I
Sbjct: 211 ESDNIVIRATRVVTDRLTDVFSDVFSQSEMAKTLSEITKIDPQFNKDRFLQECE--FEII 268
Query: 115 ---VDSFFEGKVHAIEK 128
++ F +GK+ ++
Sbjct: 269 PAVLEGFLQGKLDILKD 285
>gi|149921069|ref|ZP_01909528.1| hypothetical protein PPSIR1_09510 [Plesiocystis pacifica SIR-1]
gi|149818073|gb|EDM77530.1| hypothetical protein PPSIR1_09510 [Plesiocystis pacifica SIR-1]
Length = 506
Score = 38.7 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 18/133 (13%)
Query: 91 IVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEK 150
I +F F + N + + A+ + + ++L+ R
Sbjct: 129 IRRHDPNFSAVVFEDFITNLFVRAQQA--RCDAQAL-DALAPYISAPSREALARRAPRGV 185
Query: 151 NVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIW 210
+ ++G +++I A + E + + F E + D W
Sbjct: 186 RLSHVVIG--RVQVIGARVAEGRCVVQVLFEANFSDEV-----------GERTWYIRDRW 232
Query: 211 TFVRN--IPPSNP 221
F R+ + P
Sbjct: 233 RFERDAAVTSRPP 245
>gi|194886908|ref|XP_001976708.1| GG23023 [Drosophila erecta]
gi|190659895|gb|EDV57108.1| GG23023 [Drosophila erecta]
Length = 267
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKS-- 147
+DF K+F+ A+ + + + G + +++ LV + + R+
Sbjct: 105 DSDFQLKEFIYGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQLE 164
Query: 148 -NEKNVKSSLVGIDDMKIINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
E ++ S + +A +++ V IT+ V + +S ++ +
Sbjct: 165 IKESDIYLSFPYQVGIMFDDANDKLQKRFVEITMVFHVMRGLSEMRERGEEI 216
>gi|282917708|ref|ZP_06325459.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus D139]
gi|283767445|ref|ZP_06340360.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus H19]
gi|282318463|gb|EFB48822.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus D139]
gi|283461324|gb|EFC08408.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus H19]
gi|283471578|emb|CAQ50789.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus ST398]
Length = 460
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R+V + DK+ L + +
Sbjct: 427 TVRLVNENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|110800878|ref|YP_695686.1| hypothetical protein CPF_1240 [Clostridium perfringens ATCC 13124]
gi|110675525|gb|ABG84512.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 256
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMK-IIN 166
S+ I +++ ++ L+ + ++ ++ S V + + I+
Sbjct: 120 EESFPIIQEAWMNRDYSPVKHLMTDNFFDTHTVKMNWMLLKKEKNILSDVELKKVTPILA 179
Query: 167 ASIEEN-TVYITIRIVGQFISASYDKDNL-LISSDPEIFGKVIDIWTFVR 214
+EN +I + + + I + +++N +I D + W F+R
Sbjct: 180 VENDENGEDFIWVLLKAKMIDYTINEENNCIIDGDYSTANSFEEFWKFIR 229
>gi|195429503|ref|XP_002062798.1| GK19646 [Drosophila willistoni]
gi|194158883|gb|EDW73784.1| GK19646 [Drosophila willistoni]
Length = 242
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKSNE 149
++F KDF+ A+ + + + G++ +++ LV S + + R+ E
Sbjct: 80 DSEFQLKDFIYGAKEALQVVSSRLMGGELDSLQNLVSSEAINELKPVIQKLSMTQRRQLE 139
Query: 150 KNVKSSLVGIDDMK---IINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
+ A +++ V IT+ V + +S ++ + +
Sbjct: 140 IKQSDIYLSFPYQVGIIFDEANDKLQKRFVEITMVFHVMRGLSEMRERGDEI 191
>gi|195353340|ref|XP_002043163.1| GM11918 [Drosophila sechellia]
gi|194127251|gb|EDW49294.1| GM11918 [Drosophila sechellia]
Length = 267
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 66/176 (37%), Gaps = 23/176 (13%)
Query: 39 KPFSGFFSG-KYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSV--- 94
+P F+ K+D+ +L + + + I + + N + +
Sbjct: 45 QPVRRSFASLPQEQDKKDQNARESLNRLPRLMDFPEIVWPSALNSLKNWITIQFIIRPYF 104
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKSNE 149
++F KDF+ A+ + + + G + +++ LV + + R+
Sbjct: 105 DSEFQLKDFIYGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQL- 163
Query: 150 KNVKSSL-------VGIDDMKIINAS--IEENTVYITIRI-VGQFISASYDKDNLL 195
+ +S + VGI +AS +++ V IT+ V + +S ++ +
Sbjct: 164 EISESDIYLSFPYQVGI---MFDDASDKLQKRFVEITMVFHVMRGLSEMRERGEEI 216
>gi|74008921|ref|XP_549236.2| PREDICTED: similar to CG3776-PA [Canis familiaris]
Length = 220
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F DF A+ ++ + + K +E+LV V + ++
Sbjct: 65 DQEFSIADFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHVLKEKVT 113
>gi|254518212|ref|ZP_05130268.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226911961|gb|EEH97162.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 266
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 60/154 (38%), Gaps = 19/154 (12%)
Query: 86 KVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTR 145
++++ + ++D + N+ ++ + ++ E ++ + ++Y + R
Sbjct: 103 SAIKNLSKMDYNWDYDNIKNDIEEAFYKVQVAWMERNQDLAKEYMSEKLY------IRHR 156
Query: 146 KSNE----KNVKSSLVGIDDMKIINASIEE----NTVYITIRIVGQFISAS-YDKDNLLI 196
E + K+ L I + I ++++ N + + I + I + ++ N +I
Sbjct: 157 SKTEWMKVRKEKNILEKIKLVSAIPIALQDKDGTNEDSLWVHIKAKSIDYTIKEETNEII 216
Query: 197 SSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230
+ + W F++N WVL +
Sbjct: 217 EGNKYRITHFEEYWKFIKN----EKRWVLDEIRQ 246
>gi|327260776|ref|XP_003215209.1| PREDICTED: uncharacterized protein C2orf47 homolog,
mitochondrial-like [Anolis carolinensis]
Length = 257
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 18/152 (11%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN--- 151
+F +F A+ ++ + + K +E+LV + Q + LS N ++
Sbjct: 101 DQEFSIHEFTEGAKQAFAHVSRLIAQCKYDLLEELVSKEMVQILKEKLSLLSENHRSALA 160
Query: 152 VKSSLVGIDDMKIINASIEEN---TVYITIRI----VGQFISASYD--KDNLLISSDPEI 202
+ + +++ V I +R + D K ++ D E
Sbjct: 161 ADMDEIMYTTAGDVGIYYDDSGRKFVSILMRFWYLTSADLPDETPDGTKVFQVVFGD-EA 219
Query: 203 FGKVIDIWT----FVRNIPPS-NPNWVLISTK 229
+ + T F R P+W + +
Sbjct: 220 SKETKRLLTANYEFRREFTQGVKPDWTITRIE 251
>gi|262052119|ref|ZP_06024328.1| TcaA protein [Staphylococcus aureus 930918-3]
gi|259160020|gb|EEW45055.1| TcaA protein [Staphylococcus aureus 930918-3]
Length = 460
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPRIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|328863140|gb|EGG12240.1| hypothetical protein MELLADRAFT_73983 [Melampsora larici-populina
98AG31]
Length = 318
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 153 KSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTF 212
+ +V + V I +R D+ LL+S E V++ + F
Sbjct: 234 EMEIVTMRAAPFDKG---GTVVQIAVRFRTYQSLEVRDECGLLVSGSHESPQLVMEYFVF 290
Query: 213 VRNIPPSNPNWVLI 226
+ + N ++L
Sbjct: 291 QKRMSMVNQPFLLF 304
>gi|196228513|ref|ZP_03127380.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
gi|196227916|gb|EDY22419.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
Length = 824
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 20/157 (12%)
Query: 26 QLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGII----TLGKGKKKDNLDSINELFPIG 81
+LR L ++ G ++ + + + + T + + + + EL G
Sbjct: 640 RLRAALARRDGAKERLTLLQRQRLALRGQSGPVPVDDELTAAERELAEAEARVGELQMSG 699
Query: 82 TRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDS 141
T N + + P+ ++ AR + + F G +
Sbjct: 700 TP-NGGLLPVTQSNGHLVPQSVVDSAREALDVAQKRFEAGNIDQ-------------VTC 745
Query: 142 LSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178
+ R+ + ++ VG D + A + + +
Sbjct: 746 MKAREQLQW-AEAMFVG-DRLGAAKARRDGARERLEV 780
>gi|332815085|ref|XP_003309438.1| PREDICTED: uncharacterized protein C2orf47, mitochondrial-like [Pan
troglodytes]
Length = 291
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 21/49 (42%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F EA+ ++ + + K +E+LV V + ++
Sbjct: 136 DKEFSITEFRREAKQAFAHVSKLLSQCKFDLLEELVAKEVLHALKEKVT 184
>gi|254029410|gb|ACT53403.1| assimilatory nitrate reductase [uncultured bacterium]
Length = 219
Score = 37.9 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 33/99 (33%), Gaps = 6/99 (6%)
Query: 41 FSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLN--KVMRDIVSVYTDF 98
+ + ++ + + + GT L + +V F
Sbjct: 67 LFQRLPKRKKRDPKSLTIVVVDPRATDTAKIADYHLAIAPGTDLAFLHGLARLVIEDNGF 126
Query: 99 DPKDFLNEARN---SYEAIVDSFFEGKVHAIEKLVDSRV 134
D DF++ A +Y I++++ G+ + + + +
Sbjct: 127 D-SDFIDAATEGFSAYAQIINAWTPGETANLCGITEQDL 164
>gi|329730366|gb|EGG66756.1| TcaA protein [Staphylococcus aureus subsp. aureus 21193]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|329315043|gb|AEB89456.1| Membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus T0131]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|323439961|gb|EGA97676.1| bicyclomycin and teicoplanin resistance protein [Staphylococcus
aureus O11]
gi|323443684|gb|EGB01297.1| bicyclomycin and teicoplanin resistance protein [Staphylococcus
aureus O46]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|302333989|gb|ADL24182.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|298695618|gb|ADI98840.1| bicyclomycin and teicoplanin resistance protein [Staphylococcus
aureus subsp. aureus ED133]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|262049816|ref|ZP_06022680.1| TcaA protein [Staphylococcus aureus D30]
gi|259162123|gb|EEW46701.1| TcaA protein [Staphylococcus aureus D30]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|258425101|ref|ZP_05687972.1| teicoplanin resistance protein TcaA [Staphylococcus aureus A9635]
gi|257844935|gb|EEV68978.1| teicoplanin resistance protein TcaA [Staphylococcus aureus A9635]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|253730027|ref|ZP_04864192.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253726240|gb|EES94969.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|253314696|ref|ZP_04837909.1| TcaA protein [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|258407378|ref|ZP_05680521.1| membrane-associated protein TcaA [Staphylococcus aureus A9763]
gi|258439686|ref|ZP_05690432.1| membrane-associated protein tcaA [Staphylococcus aureus A9299]
gi|258442757|ref|ZP_05691317.1| membrane-associated protein tcaA [Staphylococcus aureus A8115]
gi|258446543|ref|ZP_05694698.1| membrane-associated protein tcaA [Staphylococcus aureus A6300]
gi|258450340|ref|ZP_05698432.1| membrane-associated protein tcaA [Staphylococcus aureus A6224]
gi|258455284|ref|ZP_05703244.1| membrane-associated protein tcaA [Staphylococcus aureus A5937]
gi|269203988|ref|YP_003283257.1| tcaA protein [Staphylococcus aureus subsp. aureus ED98]
gi|282893802|ref|ZP_06302034.1| membrane-associated protein tcaA [Staphylococcus aureus A8117]
gi|282926910|ref|ZP_06334537.1| membrane-associated protein tcaA [Staphylococcus aureus A10102]
gi|296275442|ref|ZP_06857949.1| tcaA protein [Staphylococcus aureus subsp. aureus MR1]
gi|297244100|ref|ZP_06927990.1| membrane-associated protein tcaA [Staphylococcus aureus A8796]
gi|257840890|gb|EEV65341.1| membrane-associated protein TcaA [Staphylococcus aureus A9763]
gi|257847462|gb|EEV71464.1| membrane-associated protein tcaA [Staphylococcus aureus A9299]
gi|257851878|gb|EEV75812.1| membrane-associated protein tcaA [Staphylococcus aureus A8115]
gi|257854611|gb|EEV77559.1| membrane-associated protein tcaA [Staphylococcus aureus A6300]
gi|257856432|gb|EEV79341.1| membrane-associated protein tcaA [Staphylococcus aureus A6224]
gi|257862495|gb|EEV85263.1| membrane-associated protein tcaA [Staphylococcus aureus A5937]
gi|262076278|gb|ACY12251.1| tcaA protein [Staphylococcus aureus subsp. aureus ED98]
gi|282591361|gb|EFB96434.1| membrane-associated protein tcaA [Staphylococcus aureus A10102]
gi|282763860|gb|EFC03988.1| membrane-associated protein tcaA [Staphylococcus aureus A8117]
gi|285818019|gb|ADC38506.1| Teicoplanin resistance associated membrane protein TcaA
[Staphylococcus aureus 04-02981]
gi|297178878|gb|EFH38123.1| membrane-associated protein tcaA [Staphylococcus aureus A8796]
gi|312830703|emb|CBX35545.1| tcaA protein [Staphylococcus aureus subsp. aureus ECT-R 2]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|148268793|ref|YP_001247736.1| membrane protein-like protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150394863|ref|YP_001317538.1| TcaA protein [Staphylococcus aureus subsp. aureus JH1]
gi|257794698|ref|ZP_05643677.1| membrane-associated protein tcaA [Staphylococcus aureus A9781]
gi|258422294|ref|ZP_05685206.1| membrane-associated protein tcaA [Staphylococcus aureus A9719]
gi|295405043|ref|ZP_06814856.1| membrane-associated protein tcaA [Staphylococcus aureus A8819]
gi|189029833|sp|A6U483|TCAA_STAA2 RecName: Full=Membrane-associated protein tcaA
gi|189029834|sp|A5IVD7|TCAA_STAA9 RecName: Full=Membrane-associated protein tcaA
gi|147741862|gb|ABQ50160.1| membrane protein-like protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149947315|gb|ABR53251.1| TcaA protein [Staphylococcus aureus subsp. aureus JH1]
gi|257788670|gb|EEV27010.1| membrane-associated protein tcaA [Staphylococcus aureus A9781]
gi|257841725|gb|EEV66162.1| membrane-associated protein tcaA [Staphylococcus aureus A9719]
gi|294969988|gb|EFG46006.1| membrane-associated protein tcaA [Staphylococcus aureus A8819]
gi|315128722|gb|EFT84723.1| TcaA protein [Staphylococcus aureus subsp. aureus CGS03]
gi|329723641|gb|EGG60170.1| TcaA protein [Staphylococcus aureus subsp. aureus 21172]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|87161173|ref|YP_494937.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88196276|ref|YP_501096.1| hypothetical protein SAOUHSC_02635 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222469|ref|YP_001333291.1| teicoplanin resistance associated protein A [Staphylococcus aureus
subsp. aureus str. Newman]
gi|161510550|ref|YP_001576209.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141289|ref|ZP_03565782.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253734228|ref|ZP_04868393.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|258452629|ref|ZP_05700633.1| teicoplanin resistance associated protein A [Staphylococcus aureus
A5948]
gi|282925246|ref|ZP_06332905.1| teicoplanin resistance associated membrane protein TcaA
[Staphylococcus aureus A9765]
gi|284025379|ref|ZP_06379777.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus 132]
gi|294848898|ref|ZP_06789643.1| teicoplanin resistance associated membrane protein TcaA
[Staphylococcus aureus A9754]
gi|304379548|ref|ZP_07362282.1| Teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|122540630|sp|Q2G2I1|TCAA_STAA8 RecName: Full=Membrane-associated protein tcaA
gi|123484654|sp|Q2FEE1|TCAA_STAA3 RecName: Full=Membrane-associated protein tcaA
gi|189029835|sp|A6QJJ7|TCAA_STAAE RecName: Full=Membrane-associated protein tcaA
gi|189029836|sp|A8Z547|TCAA_STAAT RecName: Full=Membrane-associated protein tcaA
gi|87127147|gb|ABD21661.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87203834|gb|ABD31644.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150375269|dbj|BAF68529.1| teicoplanin resistance associated protein A [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160369359|gb|ABX30330.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253727923|gb|EES96652.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257859701|gb|EEV82545.1| teicoplanin resistance associated protein A [Staphylococcus aureus
A5948]
gi|269941941|emb|CBI50352.1| teicoplanin resistance associated membraneprotein [Staphylococcus
aureus subsp. aureus TW20]
gi|282592647|gb|EFB97656.1| teicoplanin resistance associated membrane protein TcaA
[Staphylococcus aureus A9765]
gi|294824277|gb|EFG40701.1| teicoplanin resistance associated membrane protein TcaA
[Staphylococcus aureus A9754]
gi|302752227|gb|ADL66404.1| teicoplanin resistance associated membrane protein TcaA protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304341893|gb|EFM07798.1| Teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315198099|gb|EFU28430.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140102|gb|EFW31961.1| TcaA protein [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143371|gb|EFW35152.1| TcaA protein [Staphylococcus aureus subsp. aureus MRSA177]
gi|329726064|gb|EGG62537.1| TcaA protein [Staphylococcus aureus subsp. aureus 21189]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|57650900|ref|YP_187158.1| tcaA protein [Staphylococcus aureus subsp. aureus COL]
gi|81693864|sp|Q5HDJ9|TCAA_STAAC RecName: Full=Membrane-associated protein tcaA; AltName:
Full=Teicoplanin-associated protein A
gi|10946544|gb|AAG23888.1| TcaA [Staphylococcus aureus subsp. aureus COL]
gi|57285086|gb|AAW37180.1| tcaA protein [Staphylococcus aureus subsp. aureus COL]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|82751951|ref|YP_417692.1| bicyclomycin and teicoplanin resistance protein [Staphylococcus
aureus RF122]
gi|123549387|sp|Q2YYX9|TCAA_STAAB RecName: Full=Membrane-associated protein tcaA
gi|82657482|emb|CAI81924.1| bicyclomycin and teicoplanin resistance protein [Staphylococcus
aureus RF122]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|49487139|ref|YP_044360.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|297209826|ref|ZP_06926222.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|81648743|sp|Q6G6W4|TCAA_STAAS RecName: Full=Membrane-associated protein tcaA
gi|49245582|emb|CAG44060.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|296885499|gb|EFH24436.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus ATCC 51811]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|21284006|ref|NP_647094.1| TcaA protein [Staphylococcus aureus subsp. aureus MW2]
gi|300910838|ref|ZP_07128288.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus TCH70]
gi|81762078|sp|Q8NV48|TCAA_STAAW RecName: Full=Membrane-associated protein tcaA
gi|21205449|dbj|BAB96142.1| TcaA protein [Staphylococcus aureus subsp. aureus MW2]
gi|300887818|gb|EFK83013.1| teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus TCH70]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|15925346|ref|NP_372880.1| TcaA protein [Staphylococcus aureus subsp. aureus Mu50]
gi|15927936|ref|NP_375469.1| TcaA protein [Staphylococcus aureus subsp. aureus N315]
gi|156980671|ref|YP_001442930.1| TcaA protein [Staphylococcus aureus subsp. aureus Mu3]
gi|255007132|ref|ZP_05145733.2| TcaA protein [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|81705170|sp|Q7A3X6|TCAA_STAAN RecName: Full=Membrane-associated protein tcaA
gi|81781026|sp|Q99RS0|TCAA_STAAM RecName: Full=Membrane-associated protein tcaA
gi|189029832|sp|A7X5X6|TCAA_STAA1 RecName: Full=Membrane-associated protein tcaA
gi|13702307|dbj|BAB43448.1| TcaA protein [Staphylococcus aureus subsp. aureus N315]
gi|14248130|dbj|BAB58518.1| TcaA protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156722806|dbj|BAF79223.1| TcaA protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 460
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R++ + DK+ L + +
Sbjct: 427 TVRLINENGKQV-DKEYELEQGSQDRLQLIK 456
>gi|241688874|ref|XP_002411729.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504549|gb|EEC14043.1| conserved hypothetical protein [Ixodes scapularis]
Length = 270
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 14/94 (14%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD----SRV---YQDFNDSLSTRKS 147
++ +FLN A+ + + G ++E LV S V Y F + R+
Sbjct: 120 DRSYNQTEFLNGAKQALTYVSALVARGDFKSLEGLVASPTISEVQRNYSRFTE--EQRQK 177
Query: 148 NEKNVKSSLVGIDDMKIINASIEENTVYITIRIV 181
+V+ + + + I +++ R V
Sbjct: 178 --LSVELTDIYFCFLYQIGIIMDDRNDQ---RFV 206
>gi|195489883|ref|XP_002092927.1| GE14459 [Drosophila yakuba]
gi|194179028|gb|EDW92639.1| GE14459 [Drosophila yakuba]
Length = 267
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKS-- 147
++F K+F+ A+ + + + G + +++ LV + + R+
Sbjct: 105 DSEFQLKEFIYGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQLE 164
Query: 148 -NEKNVKSSLVGIDDMKIINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
E ++ S + +A +++ V IT+ V + +S ++ +
Sbjct: 165 IKESDIYLSFPYQVGIMFDDANDKLQKRFVEITMVFHVMRGLSEMRERGEEI 216
>gi|119945053|ref|YP_942733.1| hypothetical protein Ping_1308 [Psychromonas ingrahamii 37]
gi|119863657|gb|ABM03134.1| hypothetical protein Ping_1308 [Psychromonas ingrahamii 37]
Length = 561
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 89 RDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSN 148
I + F + N++ I ++ E + + + + + +K
Sbjct: 50 NKIRHLDKHFSTALITSRVENAFYIIKQAWSEQDISYSRAFISDGISESYQIQFEIQKKQ 109
Query: 149 EKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVID 208
+ K + I + +++ +++ + +I + + I + K D
Sbjct: 110 QHRRKIENLIITNSELVGIEADKHFETLHFKITS--------RADYPIE--IKGRNKQTD 159
Query: 209 IW 210
W
Sbjct: 160 SW 161
>gi|324523301|gb|ADY48225.1| 39S ribosomal protein L45 [Ascaris suum]
Length = 171
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 171 ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVL 225
+ +T+R+ A YDK LI V++ F +I + W L
Sbjct: 56 NDIAQLTVRMHTVQKLAIYDKFGRLILGSEVEPKAVVEYVVFENHIASLDGAWRL 110
>gi|196001951|ref|XP_002110843.1| hypothetical protein TRIADDRAFT_54172 [Trichoplax adhaerens]
gi|190586794|gb|EDV26847.1| hypothetical protein TRIADDRAFT_54172 [Trichoplax adhaerens]
Length = 302
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSR 133
DF FL A + + I D+ IE L+
Sbjct: 111 DFSKDSFLEGANQAMKMICDAISTDDYSRIEDLLSPE 147
>gi|226941931|ref|YP_002797005.1| hypothetical protein LHK_03018 [Laribacter hongkongensis HLHK9]
gi|226716858|gb|ACO75996.1| hypothetical protein LHK_03018 [Laribacter hongkongensis HLHK9]
Length = 333
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/192 (9%), Positives = 52/192 (27%), Gaps = 29/192 (15%)
Query: 42 SGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK 101
+G I + TRL
Sbjct: 170 AGMVPPNARAPLNPNAFKINPTGSVPVPPIGGGYAQPAALTRLPDGTE----------VP 219
Query: 102 DFLNEARNSYEAIVDSFFEGK-VHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGID 160
F+ +A+ ++ + S V + K + +++ ++ + +D
Sbjct: 220 HFVRQAKATF-MHLQSMNNPDNVEEVRKYLTPELFEQLRADIA-----GNPETADFPQLD 273
Query: 161 DMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN 220
+ ++ + + ++R L+ S + W F+++ ++
Sbjct: 274 CQVVDASTEADGRIVASVRFS-----------GLVSESVGAPALPFAETWHFIKS-DATS 321
Query: 221 PNWVLISTKLGE 232
WV+ + +
Sbjct: 322 QKWVVAGIQQDQ 333
>gi|326922533|ref|XP_003207503.1| PREDICTED: uncharacterized protein C2orf47 homolog,
mitochondrial-like, partial [Meleagris gallopavo]
Length = 170
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 23/48 (47%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
++F ++F A+ ++ + + K+ ++ LV + V Q + +
Sbjct: 14 DSEFSIEEFTRGAKQAFSVVSQLLSQRKLDLLDGLVSAEVLQMLKEKI 61
>gi|168703587|ref|ZP_02735864.1| hypothetical protein GobsU_28900 [Gemmata obscuriglobus UQM 2246]
Length = 269
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 9/93 (9%)
Query: 19 ITFFVFLQLRGVL--GKKTGNEKPFSGFFSGKYVFSKRDERGIIT-------LGKGKKKD 69
+ F+ +LR VL G + G +P + +++ + + +
Sbjct: 121 MAEFLVGRLRAVLPAGTRVGFLEPDFRRPLAQLARAEQQRPELAPLLTFARAINELYAAR 180
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKD 102
+ R++ V+ F +
Sbjct: 181 RISPAVGASLAPAMYESGYREVKHVWHPFATDE 213
>gi|20130393|ref|NP_611989.1| CG3776 [Drosophila melanogaster]
gi|7291887|gb|AAF47306.1| CG3776 [Drosophila melanogaster]
gi|17944240|gb|AAL48014.1| LD24657p [Drosophila melanogaster]
gi|220944864|gb|ACL84975.1| Jhebp29-PA [synthetic construct]
gi|220954772|gb|ACL89929.1| Jhebp29-PA [synthetic construct]
Length = 263
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKS-- 147
++F KDF+ A+ + + + G + +++ LV + + R+
Sbjct: 101 DSEFQLKDFIYGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQLE 160
Query: 148 -NEKNVKSSLVGIDDMKIINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
E ++ S + +A +++ V IT+ V + +S ++ +
Sbjct: 161 IKESDIYLSFPYQVGIMFDDANDKLQKRFVEITMVFHVMRGLSEMRERGEEI 212
>gi|319784486|ref|YP_004143962.1| hypothetical protein Mesci_4803 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170374|gb|ADV13912.1| hypothetical protein Mesci_4803 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 257
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/100 (10%), Positives = 26/100 (26%), Gaps = 8/100 (8%)
Query: 38 EKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTD 97
E P + + + + + + + + V D
Sbjct: 42 ELPPTVTPPADDMSPPGSTVPMPNPVGTPPPSSQPTAPAEAEPDSPADGGVTR-PRVDPD 100
Query: 98 -------FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
+D R ++ IV++ G + + L+
Sbjct: 101 TPVPEVIYDLGKLPEPVRRMHDLIVEACKGGDIEKLRPLI 140
>gi|17545005|ref|NP_518407.1| hypothetical protein RSc0286 [Ralstonia solanacearum GMI1000]
gi|17427295|emb|CAD13814.1| probable cell division ftsn transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 238
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/149 (10%), Positives = 42/149 (28%), Gaps = 21/149 (14%)
Query: 37 NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYT 96
N+ + + ++ + + P+ + ++ R +
Sbjct: 103 NQPGTQPGTQPASQATPKPAEPGSSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAKTG 162
Query: 97 DFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS- 155
F + A + +G + Q F ++ R+ N
Sbjct: 163 YFLQVGAYDSAEYAERQ------KGNLA----------MQGFEAKVTQREVNGSTKYRVR 206
Query: 156 ---LVGIDDMKIINASIEENTVYITI-RI 180
+D+M + + ++ + V T+ R
Sbjct: 207 LGPFNSLDEMTAVRSRLQASGVESTVIRF 235
>gi|91228595|ref|ZP_01262513.1| hypothetical protein V12G01_00367 [Vibrio alginolyticus 12G01]
gi|91187827|gb|EAS74141.1| hypothetical protein V12G01_00367 [Vibrio alginolyticus 12G01]
Length = 148
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFS 52
IL+ I F +F +RG+LG K G ++P G + K+
Sbjct: 96 ILIIGLIAFVIFKLMRGMLGAKQGSMNQHRQQPAFGGNASKFEQP 140
>gi|311272864|ref|XP_003133619.1| PREDICTED: uncharacterized protein C2orf47 homolog,
mitochondrial-like [Sus scrofa]
Length = 288
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 19/49 (38%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV + ++
Sbjct: 133 DQEFSIAEFSEGAKQAFSHVSKLLSQCKFDLLEELVAKEALHVLKEKVT 181
>gi|153838005|ref|ZP_01990672.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|149748613|gb|EDM59472.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
Length = 168
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 13 ILLFAFITFFVFLQLRGVLGKKTG-----NEKPFSGFFSGKYVFS 52
IL+ I F +F +RG+LG K G ++P G + K+
Sbjct: 96 ILIIGLIAFIIFKLMRGMLGAKQGSMNQQRQQPAFGGNASKFEQP 140
>gi|283959137|ref|ZP_06376578.1| TcaA protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|283788729|gb|EFC27556.1| TcaA protein [Staphylococcus aureus subsp. aureus A017934/97]
Length = 460
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R+V + DK+ L + +
Sbjct: 427 TVRLVNENGKQV-DKEYELEQGPQDRLQLIK 456
>gi|49484571|ref|YP_041795.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257423838|ref|ZP_05600267.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257426521|ref|ZP_05602923.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257429157|ref|ZP_05605544.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257431803|ref|ZP_05608166.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257434763|ref|ZP_05610814.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus M876]
gi|282902268|ref|ZP_06310161.1| TcaA protein [Staphylococcus aureus subsp. aureus C160]
gi|282906697|ref|ZP_06314545.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909673|ref|ZP_06317482.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282911919|ref|ZP_06319715.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282915215|ref|ZP_06322992.1| TcaA protein [Staphylococcus aureus subsp. aureus M899]
gi|282920939|ref|ZP_06328657.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus C427]
gi|282925845|ref|ZP_06333493.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus C101]
gi|293497611|ref|ZP_06665465.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|293511190|ref|ZP_06669886.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus M809]
gi|293549798|ref|ZP_06672470.1| TcaA protein [Staphylococcus aureus subsp. aureus M1015]
gi|295428937|ref|ZP_06821561.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589568|ref|ZP_06948209.1| Teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus MN8]
gi|81650499|sp|Q6GE78|TCAA_STAAR RecName: Full=Membrane-associated protein tcaA
gi|49242700|emb|CAG41424.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257272856|gb|EEV04958.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257276152|gb|EEV07603.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257279638|gb|EEV10225.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257282682|gb|EEV12814.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257285359|gb|EEV15475.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus M876]
gi|282312674|gb|EFB43078.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus C101]
gi|282315354|gb|EFB45738.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus C427]
gi|282320936|gb|EFB51270.1| TcaA protein [Staphylococcus aureus subsp. aureus M899]
gi|282323615|gb|EFB53931.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282326247|gb|EFB56551.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282329596|gb|EFB59117.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282596727|gb|EFC01686.1| TcaA protein [Staphylococcus aureus subsp. aureus C160]
gi|290918845|gb|EFD95921.1| TcaA protein [Staphylococcus aureus subsp. aureus M1015]
gi|291096542|gb|EFE26800.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|291465816|gb|EFF08346.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus M809]
gi|295127286|gb|EFG56928.1| membrane-associated protein tcaA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297578079|gb|EFH96792.1| Teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus MN8]
gi|312437228|gb|ADQ76299.1| Teicoplanin resistance protein TcaA [Staphylococcus aureus subsp.
aureus TCH60]
gi|315193621|gb|EFU24017.1| teicoplanin resistance associated membrane protein [Staphylococcus
aureus subsp. aureus CGS00]
Length = 460
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176
+F + + + F D + R S SL+ I +II+A + +
Sbjct: 374 AFNQSDFDFVSSYIKKG--SSFYDDVKKRVSKG-----SLMMISSPQIIDAEKHGDKITA 426
Query: 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVI 207
T+R+V + DK+ L + +
Sbjct: 427 TVRLVNENGKQV-DKEYELEQGPQDRLQLIK 456
>gi|328701155|ref|XP_001951633.2| PREDICTED: uncharacterized protein C2orf47 homolog,
mitochondrial-like [Acyrthosiphon pisum]
gi|239789772|dbj|BAH71488.1| ACYPI004057 [Acyrthosiphon pisum]
Length = 279
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Query: 92 VSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
+ DF +F +R + E + + + ++ LV + V + +S
Sbjct: 119 PQLDKDFSLGEFAKNSRKAVEVVSNCISKRDFTTLQGLVTNDVLEQVKSIVSD------- 171
Query: 152 VKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
++D +I + + + + +Y+ + + I+ + KD +
Sbjct: 172 -------LNDNEIKDMAFDNDDMYLFLPVQLDIINDTKLKDRRFVE 210
>gi|225375951|ref|ZP_03753172.1| hypothetical protein ROSEINA2194_01588 [Roseburia inulinivorans DSM
16841]
gi|225212204|gb|EEG94558.1| hypothetical protein ROSEINA2194_01588 [Roseburia inulinivorans DSM
16841]
Length = 197
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 18/175 (10%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M++ +I++ A + G + V + G
Sbjct: 1 MNNWIPVIVILAVLAG-------------GGYYAYRKIKRKVEDVSQALFGTDSLVEGWN 47
Query: 66 KKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHA 125
K+ D L + + TR+ + I + DF+ F N+A N + + + G V
Sbjct: 48 KQADELAATPKSVSGMTRIFEP--QIQRDFPDFNLVQFKNKAENMLVSALQAIDSGNVSL 105
Query: 126 IEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRI 180
I + + + +S + I +I N E+N +++
Sbjct: 106 IRD-ASEELKAQVENRIEMNRSEGIREVYEKIRIHRTEISN--YEKNRENVSLHF 157
>gi|134085699|ref|NP_001076875.1| hypothetical protein LOC510566 precursor [Bos taurus]
gi|158513402|sp|A3KN05|CB047_BOVIN RecName: Full=Uncharacterized protein C2orf47 homolog,
mitochondrial; Flags: Precursor
gi|126717401|gb|AAI33464.1| C2H2orf47 protein [Bos taurus]
gi|296490429|gb|DAA32542.1| hypothetical protein LOC510566 precursor [Bos taurus]
Length = 291
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 19/49 (38%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F A+ ++ + + K +E+LV + ++
Sbjct: 136 DQEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKETLHVLKEKVT 184
>gi|297193178|ref|ZP_06910576.1| 2,4-dienoyl-CoA reductase [Streptomyces pristinaespiralis ATCC
25486]
gi|297151675|gb|EFH31303.1| 2,4-dienoyl-CoA reductase [Streptomyces pristinaespiralis ATCC
25486]
Length = 684
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 34/95 (35%), Gaps = 21/95 (22%)
Query: 25 LQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPI---- 80
++LR LG + G + + + ++ G + ++D ++ +
Sbjct: 453 VRLR--LGTRVG----------ADDLPAADFDEVVVATGVTPRTPDIDGVDHPSVVSYLD 500
Query: 81 ----GTRLNKVMRDIVSVYTDFDPKDFL-NEARNS 110
G + + + I + FD +FL + +
Sbjct: 501 VLRDGAPVGERVAVIGAGGIGFDVAEFLTDGGEGA 535
>gi|323691491|ref|ZP_08105762.1| hypothetical protein HMPREF9475_00624 [Clostridium symbiosum
WAL-14673]
gi|323504464|gb|EGB20255.1| hypothetical protein HMPREF9475_00624 [Clostridium symbiosum
WAL-14673]
Length = 221
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND-SLSTRKSNEKNVKSSLVGIDDMKIIN 166
R + E + +F + ++ + L V F L+ KS E+ + I K+ +
Sbjct: 2 RKAAEQVQKAFEKKDLNKLADLCSYPVVVSFKSGELAELKSKEEFMALGSQTIFTQKMTD 61
Query: 167 ASIEENTVYIT 177
A N +T
Sbjct: 62 AIASTNVAKLT 72
>gi|323483063|ref|ZP_08088456.1| hypothetical protein HMPREF9474_00205 [Clostridium symbiosum
WAL-14163]
gi|323403603|gb|EGA95908.1| hypothetical protein HMPREF9474_00205 [Clostridium symbiosum
WAL-14163]
Length = 265
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFND-SLSTRKSNEKNVKSSLVGIDDMKIIN 166
R + E + +F + ++ + L V F L+ KS E+ + I K+ +
Sbjct: 46 RKAAEQVQKAFEKKDLNKLADLCSYPVVVSFKSGELAELKSKEEFMALGSQTIFTQKMTD 105
Query: 167 ASIEENTVYIT 177
A N +T
Sbjct: 106 AIASTNVAKLT 116
>gi|195121668|ref|XP_002005342.1| GI20427 [Drosophila mojavensis]
gi|193910410|gb|EDW09277.1| GI20427 [Drosophila mojavensis]
Length = 226
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKSNE 149
++F KDF+ A+ + + + G + ++ LV + + RK
Sbjct: 64 DSEFQIKDFVYGAKQALQVVSSKLVGGDLSQLQDLVTPEAIAELKPVVQKLSMTQRKQL- 122
Query: 150 KNVKSSL-------VGIDDMKIINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
+ +S + +GI +A +++ V IT+ V + ++ ++ +
Sbjct: 123 EIHESDIYLSFPYQIGI---MFDDANDKLQKRWVEITMVFHVMRGLTEMRERGEEI 175
>gi|297582623|ref|YP_003698403.1| glycerophosphoryl diester phosphodiesterase [Bacillus
selenitireducens MLS10]
gi|297141080|gb|ADH97837.1| glycerophosphoryl diester phosphodiesterase [Bacillus
selenitireducens MLS10]
Length = 341
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 139 NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYIT-----IRIVGQFISASYDKDN 193
++ R ++ +S+ ID ++A E + IT + IS + D +
Sbjct: 70 VKVIAHRGASGHAPESTTHAIDKAIEMDADWIELDIQITADGHLVAFHDDEISRTTDGEG 129
Query: 194 LLISSDPEIFGK 205
+ + +
Sbjct: 130 EIGDHTLDELKE 141
>gi|42522681|ref|NP_968061.1| hypothetical protein Bd1136 [Bdellovibrio bacteriovorus HD100]
gi|39573877|emb|CAE79054.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 139
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 6 MDSGDFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKG 65
M+S DFL L F+ L + G+ +P + K E
Sbjct: 1 MNSQDFLTLNLVGAGAFIAWYLLS----RGGSRRPTQLNLNAKDSAPPLMEAAPPEKAGL 56
Query: 66 KKKDNLDSINELFPIGTR-----LNKVMRDIVSVYTDFDPKDFLNEA-----RNSYEAIV 115
+ S ++ P + LN + + ++ A +Y
Sbjct: 57 EPLRRQASTPQVHPDLSGVKTKCLNVMFNYNGHSWDAYEVLGVPAGASLKLVTEAY---Q 113
Query: 116 DSFFEGKVHAIEKL 129
+ ++E L
Sbjct: 114 TAIRRSDKESLEFL 127
>gi|195029603|ref|XP_001987661.1| GH19839 [Drosophila grimshawi]
gi|193903661|gb|EDW02528.1| GH19839 [Drosophila grimshawi]
Length = 226
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKS-- 147
++F KDF+ A+ + + + G ++ ++ LV + + RK
Sbjct: 64 DSEFQIKDFIFGAKQALQVVSSKLVGGDLNQLQDLVTPDAIAELKPVIQKLSMTQRKQLE 123
Query: 148 -NEKNVKSSLVGIDDMKIINA--SIEENTVYITIRI 180
NE ++ S + +A +++ V IT+
Sbjct: 124 INESDIYLSFPYQIGIMFDDANDKLQKRWVEITMVF 159
>gi|15672597|ref|NP_266771.1| hypothetical protein L3407 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723512|gb|AAK04713.1|AE006294_8 unknown protein [Lactococcus lactis subsp. lactis Il1403]
gi|326406115|gb|ADZ63186.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 243
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 12/105 (11%)
Query: 114 IVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV---GIDDMKIINASIE 170
+ D++ + + A+ + +Y+ L + + V GI K ++
Sbjct: 130 VQDAWDKHDLRALSESYGDNLYEKHEKILQKMSDKGQINHTRSVVLDGIMRYK----EVK 185
Query: 171 ENTVYITIRIVG--QFISASYDKDNLLISSDPEIFGKVIDIWTFV 213
+N + + V +S +I+ + + WTF
Sbjct: 186 DNQFEVDLYFVAIDYLVSV---NSGQIIAGNTQERRAFKQRWTFS 227
>gi|78485054|ref|YP_390979.1| fatty acid/phospholipid synthesis protein PlsX [Thiomicrospira
crunogena XCL-2]
gi|123555757|sp|Q31HR8|PLSX_THICR RecName: Full=Phosphate acyltransferase; AltName: Full=Acyl-ACP
phosphotransacylase; AltName:
Full=Acyl-[acyl-carrier-protein]--phosphate
acyltransferase; AltName: Full=Phosphate-acyl-ACP
acyltransferase
gi|78363340|gb|ABB41305.1| phosphate:acyl-[acyl carrier protein] acyltransferase
[Thiomicrospira crunogena XCL-2]
Length = 337
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 12/141 (8%)
Query: 29 GVLGKKTG-NEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKV 87
VL + N +P G + K +R K D ++ + + G + K
Sbjct: 163 SVLAQAVDSNSRPRVGLLNIGEEEIKGHQRIKDANEILKSSDAINYVGYV--EGDEIFKG 220
Query: 88 MRDIVSVYTDFDPKDFLNEARNSYEAIV----DSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
D+VS FD L + + I +F + + + LV V + F +
Sbjct: 221 DVDVVSCD-GFDGNVALKASEGVAKMISFYLRAAFNKNLLTKLAGLVVYPVLKAFKAKVD 279
Query: 144 TRKSNEKNVKSSLVGIDDMKI 164
R+ N +S +G+ + I
Sbjct: 280 PRRYNG----ASFLGLRKIVI 296
>gi|297571195|ref|YP_003696969.1| translation initiation factor IF-2 [Arcanobacterium haemolyticum
DSM 20595]
gi|296931542|gb|ADH92350.1| translation initiation factor IF-2 [Arcanobacterium haemolyticum
DSM 20595]
Length = 971
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 11/125 (8%)
Query: 33 KKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIV 92
K+ E+ S G + + D + I+ + M ++
Sbjct: 349 KRQEWEEQQSPMLQGVQIPRGDGSTVVRVRAGASLADFAERIDADPAALVTVLFRMGEMA 408
Query: 93 SVYTDFDPKDF-LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKN 151
+ D F L A Y+ + S + + + F+ + + ++
Sbjct: 409 TANQSLDEDTFALLGAELGYDIKIMSAEDEDREIL---------ESFDIDIDA-EHAGES 458
Query: 152 VKSSL 156
+ L
Sbjct: 459 DEDRL 463
>gi|323701289|ref|ZP_08112964.1| UDP-N-acetylmuramate/alanine ligase [Desulfotomaculum nigrificans
DSM 574]
gi|323533891|gb|EGB23755.1| UDP-N-acetylmuramate/alanine ligase [Desulfotomaculum nigrificans
DSM 574]
Length = 459
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 43/209 (20%)
Query: 16 FAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSIN 75
A + G+ G ++ +KR + I + K D+
Sbjct: 285 LAVVAV----------GRYVGLSFSQIAAALREFKGAKRRYQLIGEVKGAKIVDDYAHHP 334
Query: 76 ELFPIGTRLNKVMRDIVSVYTD-----FDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLV 130
T + ++ + F P F R + +SF + L+
Sbjct: 335 ------TEIKATLQAARQAHPGRIIAVFQPHRFTR-TRQLFREFGESFAHADI-----LI 382
Query: 131 DSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVGQFISASYD 190
+ +Y + G+ I++A + + + A+
Sbjct: 383 LTDIYPAGEKPIE--------------GVHTKLIVDAIAKRPNQQ--VIYLPTLEEATNF 426
Query: 191 KDNLLISSDPEIFGKVIDIWTFVRNIPPS 219
+ D + D+WT R +
Sbjct: 427 LTQQVTEGDLVLTMGAGDVWTVGRELLQR 455
>gi|312384625|gb|EFR29310.1| hypothetical protein AND_01857 [Anopheles darlingi]
Length = 221
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDS----RVYQDFND-SLSTR 145
DF+ DF+ A+ + + + + G+ +E LVD V Q + S++ R
Sbjct: 61 DRDFNIPDFVIGAKQALQVVSLALAGGEAKQLEGLVDRVALNDVKQSLSKMSVAER 116
>gi|146412672|ref|XP_001482307.1| hypothetical protein PGUG_05327 [Meyerozyma guilliermondii ATCC
6260]
gi|146393071|gb|EDK41229.1| hypothetical protein PGUG_05327 [Meyerozyma guilliermondii ATCC
6260]
Length = 420
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 44/141 (31%), Gaps = 8/141 (5%)
Query: 80 IGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY--EAIVDSFFEGKVHAIEKLVDSRVYQD 137
T KV++ + + F DF N Y ++D++ + +++ + +
Sbjct: 255 AETEQAKVIKQLRQIDPSFRITDFTRTLTN-YIVPELLDAYIKNDDKVLKQWLSEAPFNV 313
Query: 138 FNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG----QFISASYDKDN 193
+ + ++ I + I+ + + I + +V + K
Sbjct: 314 WQANNKQFVQQGLFSDGRILDIRGVDIVTCKMLQPN-EIPVVVVSCRAQEIHLFRKAKTG 372
Query: 194 LLISSDPEIFGKVIDIWTFVR 214
+ + + F R
Sbjct: 373 EVAAGTEDHIQLSTYAMVFTR 393
>gi|284038224|ref|YP_003388154.1| amidase [Spirosoma linguale DSM 74]
gi|283817517|gb|ADB39355.1| Amidase [Spirosoma linguale DSM 74]
Length = 526
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 43/140 (30%), Gaps = 16/140 (11%)
Query: 35 TGNEKPFSGFFSGKYVFS---KRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDI 91
G +P G S + D G I LD I T + I
Sbjct: 220 VGF-RPTLGLVSRDGIAPLAMTNDTGGPICRTVEDAVRVLDVIAGYDKADTVTKRSAGKI 278
Query: 92 VSVYTDFDPKDFLNEAR-NSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEK 150
Y F KD L AR + +V D +VY FN +L ++
Sbjct: 279 PQTYRQFLDKDGLKGARIGVFRQMVMPKNS----------DPQVYALFNKALDELRAAGA 328
Query: 151 NVKSSLVGIDDMKIINASIE 170
V V + + IN S +
Sbjct: 329 IV-IDSVRVPQLDTINKSFD 347
>gi|145348931|ref|XP_001418895.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579125|gb|ABO97188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 347
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 11/136 (8%)
Query: 38 EKPFSGFFSGKYVFSKRDERGIITLGK----GKKKDNLDSINELFPIGTRLNKVMRDIVS 93
E+ S S R RG + +++ PI R +R + +
Sbjct: 14 ERRASTPASTSSRVPARTRRGAPPRAGFGAAVPTARSAAVLDKHVPID-RYADGLRQLHA 72
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153
F DFL+ + + I + +G + VY + + + S +
Sbjct: 73 SPDVFVVDDFLSADACA-DIIARAKAKGDMTQ-----SPVVYAGWTNDVEAWTSTVSSGP 126
Query: 154 SSLVGIDDMKIINASI 169
+ +G M I +A+
Sbjct: 127 AVWIGALAMLIGSAAF 142
>gi|301101505|ref|XP_002899841.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102843|gb|EEY60895.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 285
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 38/165 (23%)
Query: 102 DFLNEARNSYEAIVDS--------FFEG------KVHAIEKLVDSRVYQDFNDS----LS 143
+FL A+ + +A + + + G + R +++ ++ L
Sbjct: 88 EFLEGAKMAAKAQLKAVNSKDFAEYAAGIASESKAAEELSNFCTPRFFENLREAAADTLR 147
Query: 144 TR----KSNEKNVKSSLV-GIDDMKIINASIEENTVYITI--------------RIVGQF 184
R + + NV+S +V G+ ++ E T + + +I Q
Sbjct: 148 DRNMTLELQDINVESIVVAGVRYAQLTQTEYEAQTAGLAVLPFFWASDASIEYMQIHVQT 207
Query: 185 ISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPP-SNPNWVLIST 228
S K L+ + WTF + W ++ T
Sbjct: 208 RSLETTKMTLIGQEECFALQDNSRTWTFGSKVGSVEELEWRIVKT 252
>gi|314933179|ref|ZP_07840544.1| ATP-dependent nuclease subunit A [Staphylococcus caprae C87]
gi|313653329|gb|EFS17086.1| ATP-dependent nuclease subunit A [Staphylococcus caprae C87]
Length = 1218
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 22/103 (21%)
Query: 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINA 167
+ +YE I+ SF ++ F++ + + V+ I +I
Sbjct: 225 KAAYEEIIKSFN--------------LFSMFDNV----EKQLEVVEDERRFISK--VIEG 264
Query: 168 SIEENTVYITIRIVGQFISASY--DKDNLLISSDPEIFGKVID 208
+ ++ + V +F S + + N + + K D
Sbjct: 265 DMINTDALVSHQFVSRFPSITKKIKEANEGMEEALDDAKKHYD 307
>gi|158298862|ref|XP_319011.4| AGAP009891-PA [Anopheles gambiae str. PEST]
gi|157014090|gb|EAA14399.5| AGAP009891-PA [Anopheles gambiae str. PEST]
Length = 285
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS 143
+F +F+ + + + + S G+V +E LVD D SL+
Sbjct: 125 DREFSLPEFIQGTKQALQVVSSSLAGGEVKQLEGLVDRAALADLKQSLA 173
>gi|327291848|ref|XP_003230632.1| PREDICTED: uncharacterized protein C2orf47 homolog,
mitochondrial-like, partial [Anolis carolinensis]
Length = 183
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+F +F A+ ++ + + K +E+LV + Q + L
Sbjct: 103 DQEFSIHEFTEGAKQAFAHVSRLIAQCKYDLLEELVSKEMVQILKEKL 150
>gi|82617538|ref|NP_001032303.1| hypothetical protein LOC552941 [Danio rerio]
gi|81097772|gb|AAI09475.1| Zgc:123096 [Danio rerio]
gi|157423611|gb|AAI53656.1| Zgc:123096 protein [Danio rerio]
Length = 243
Score = 36.4 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 18/40 (45%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
+F ++F+ A ++ + + + A+E LV +
Sbjct: 85 DKEFSIEEFMEGAIQAFSHVSRLLSQCQFEALEGLVAKDL 124
>gi|50417024|gb|AAH77162.1| Zgc:123096 protein [Danio rerio]
Length = 236
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 18/40 (45%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134
+F ++F+ A ++ + + + A+E LV +
Sbjct: 78 DKEFSIEEFMEGAIQAFSHVSRLLSQCQFEALEGLVAKDL 117
>gi|156554910|ref|XP_001604813.1| PREDICTED: similar to juvenile hormone esterase binding protein
[Nasonia vitripennis]
Length = 258
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
DF+ DFL+ + + + + +I+ LVD +
Sbjct: 100 DNDFNLPDFLDGTKQALSVVSSALAREDYDSIQDLVDKETLAKTRQKI 147
>gi|260815523|ref|XP_002602522.1| hypothetical protein BRAFLDRAFT_93828 [Branchiostoma floridae]
gi|229287833|gb|EEN58534.1| hypothetical protein BRAFLDRAFT_93828 [Branchiostoma floridae]
Length = 1324
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 25/69 (36%), Gaps = 8/69 (11%)
Query: 14 LLFAFITFFVFLQLRGVLGKKTGNE--KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNL 71
L+ + F+F + ++ G E + + ++R + + ++
Sbjct: 639 LVLVAVAIFIFWR------RRRGKESSRAPPPSVPISQLPTRRPKEESEEVDAVDIRNPN 692
Query: 72 DSINELFPI 80
++ E+ P
Sbjct: 693 PTVAEVSPT 701
>gi|5020383|gb|AAD38067.1| juvenile hormone esterase binding protein [Manduca sexta]
Length = 243
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKS 154
+F +F+ ++++ + + D+ + A+E LV+ ++ S +
Sbjct: 86 DQEFSLGEFIEASKHAVQVVSDALQQSDFKALEGLVEKDAIAALKTAV----SKLSVSQR 141
Query: 155 SLVGIDDMKIINA 167
L+ ID I A
Sbjct: 142 QLLAIDKEDIFYA 154
>gi|300705361|ref|YP_003746964.1| hypothetical protein RCFBP_21207 [Ralstonia solanacearum CFBP2957]
gi|299073025|emb|CBJ44382.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 240
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 44/150 (29%), Gaps = 24/150 (16%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELF---PIGTRLNKVMRDIVSVY 95
+P + + + + + + K + P+ + ++ R +
Sbjct: 104 QPGAQAQTPATTAKPAEPGSSVAMQRPPKPVGTPPAEKPAAEKPVADPIAEIARQDAAKT 163
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F + A + +G + Q F ++ R+ N
Sbjct: 164 GYFLQVGAYDSAEYAERQ------KGNLA----------MQGFEAKVTQREVNGATKYRV 207
Query: 156 ----LVGIDDMKIINASIEENTVYITI-RI 180
+D+M + + ++ + V T+ R
Sbjct: 208 RLGPFNSLDEMTAVRSRLQASGVESTVIRF 237
>gi|290968336|ref|ZP_06559877.1| dinuclear metal center protein, YbgI family [Megasphaera genomosp.
type_1 str. 28L]
gi|290781611|gb|EFD94198.1| dinuclear metal center protein, YbgI family [Megasphaera genomosp.
type_1 str. 28L]
Length = 373
Score = 36.0 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 26 QLRGVLGKK----TGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIG 81
QLR VLGK G + S SG+ F+ +D GK + + E G
Sbjct: 149 QLRSVLGKAGAGYIGKYRDCSFSVSGQGRFTPQDGTHPFIGMPGKAETVAEERIETIVPG 208
Query: 82 TRLNKVMRDIVSVYT 96
+RL+ V+ +V+ +
Sbjct: 209 SRLSAVIETMVAAHP 223
>gi|171060670|ref|YP_001793019.1| two component Fis family transcriptional regulator [Leptothrix
cholodnii SP-6]
gi|170778115|gb|ACB36254.1| two component transcriptional regulator, Fis family [Leptothrix
cholodnii SP-6]
Length = 240
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 27 LRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNK 86
LR V + G KP + + + ++D L + +
Sbjct: 111 LRAV---EQGLAKPVPPP-QRSMAPLAATMPAPVPMRNDRDYRSIDLQPMLNSVPQPVIS 166
Query: 87 VMRDIVSVYTDFDPKDFLNEARNSYE 112
V+ +F L EAR+++E
Sbjct: 167 VLSSGPQSDQNFSLDRPLREARDAFE 192
>gi|83748527|ref|ZP_00945548.1| FtsN [Ralstonia solanacearum UW551]
gi|207742124|ref|YP_002258516.1| cell division protein ftsn [Ralstonia solanacearum IPO1609]
gi|83724831|gb|EAP71988.1| FtsN [Ralstonia solanacearum UW551]
gi|206593512|emb|CAQ60439.1| cell division protein ftsn [Ralstonia solanacearum IPO1609]
Length = 240
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 43/150 (28%), Gaps = 24/150 (16%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELF---PIGTRLNKVMRDIVSVY 95
+P + + + + + K + P+ + ++ R +
Sbjct: 104 QPGAQAQTPATTAKPAEPGSSVAMQHPPKAVGTPPAEKPAAEKPVADPIAEIARQDAAKT 163
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F + A + +G + Q F ++ R+ N
Sbjct: 164 GYFLQVGAYDSAEYAERQ------KGNLA----------MQGFEAKVTQREVNGTTKYRV 207
Query: 156 ----LVGIDDMKIINASIEENTVYITI-RI 180
+D+M + + ++ + V T+ R
Sbjct: 208 RLGPFNSLDEMTAVRSRLQASGVESTVIRF 237
>gi|330937393|gb|EGH41378.1| import inner membrane translocase, subunit Tim44 [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 179
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 21/102 (20%)
Query: 10 DFLILLFAFITFFVFLQLRGVLGKKTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKD 69
F IL+ I F+ + + K G + +
Sbjct: 95 LFDILIMGLIA-FLIFR---------------FIARRRQQQQPKMAAAGAPPYQRETSQP 138
Query: 70 NLDSINELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY 111
+ I + +++ F+ + FL+ AR +
Sbjct: 139 AQNPIFGSSSPASA-----APVINAPAWFNEQRFLDAARGHF 175
>gi|164429129|ref|XP_956785.2| hypothetical protein NCU00466 [Neurospora crassa OR74A]
gi|157072421|gb|EAA27549.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 330
Score = 35.6 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 163 KIINASIEENTVY--ITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSN 220
+ +A ++ + +R + + +S PE + WT R P +
Sbjct: 180 SLQHAKLDGEEARPSVVMRFIVEQLSDIVSSKGE--EGSPEEKKAEAEEWTAERIKPVVD 237
Query: 221 PNWVLISTKLGE 232
+S E
Sbjct: 238 ATVKAVSVSDPE 249
>gi|325295715|ref|YP_004282229.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325066163|gb|ADY74170.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 576
Score = 35.6 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 14/119 (11%)
Query: 92 VSVYTDFDPKDFLNEARNS-YEAIVDSFFEGKVHAIEKLVDSRVYQ-----DFNDSLSTR 145
+V ++D + + +E IV K IE +Y F+ ++ R
Sbjct: 451 AAVEQNYDENGIIWPVEIAPFEVIVIPVNVKKEEIIET--AENIYDELQKNGFDVAIDDR 508
Query: 146 KSNE--KNVKSSLVGIDDMKIINASIEENTVYITIRIVGQ----FISASYDKDNLLISS 198
+ K + L+GI I+ E V I +R G+ ++ +K L+
Sbjct: 509 NARPGFKFKDADLIGIPYQIIVGKKAGEGVVEIKVRKTGERFEIAVNKVVEKIGELVRG 567
>gi|299743631|ref|XP_002910687.1| transferase [Coprinopsis cinerea okayama7#130]
gi|298405745|gb|EFI27193.1| transferase [Coprinopsis cinerea okayama7#130]
Length = 229
Score = 35.6 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Query: 49 YVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVYTDFDPK---DFLN 105
S R + + D E + + D+ +F +F
Sbjct: 67 PPSSPRPKEPEPPQPSHQDDDEPSPDGEGDIMDMETFSQLIDLDDDDPEFSKGMVWEFFQ 126
Query: 106 EARNSYEAIVDSFFEGKVHAIEKL 129
+A ++E + +F + + L
Sbjct: 127 QAETTFEELDAAFESRDLSTLSSL 150
>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
Length = 369
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 97 DFDPKDFLNEARNSYEAIVDSFF-EGKVHAIEKLVDSRVYQD-FNDSLSTRKSNEKNVKS 154
DF+ K ++EA+ +E I+ F E K +E+ ++ ++ F RK+ E + K+
Sbjct: 3 DFELKQKIDEAKKKFEDIIKVFHPENKRKELEE-LEKQMGDSDFWS--DQRKAREISQKA 59
Query: 155 SLVG--IDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV-IDIWT 211
+ IDDMK I A E+ I + D+D + + E+ ++ + T
Sbjct: 60 QRIRKIIDDMKDIEAKFEDLDAAIELS----------DEDQSFVETIKEMVEEIEKKVKT 109
Query: 212 FV 213
F
Sbjct: 110 FE 111
>gi|207727724|ref|YP_002256118.1| cell division protein ftsn [Ralstonia solanacearum MolK2]
gi|206590965|emb|CAQ56577.1| cell division protein ftsn [Ralstonia solanacearum MolK2]
Length = 240
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 43/150 (28%), Gaps = 24/150 (16%)
Query: 39 KPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELF---PIGTRLNKVMRDIVSVY 95
+P + + + + + K + P+ + ++ R +
Sbjct: 104 QPGAQAQTPATTAKPAEPGSSVAMQHPPKAVGTPPAEKPAAEKPVADPIAEIARQDAAKT 163
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F + A + +G + Q F ++ R+ N
Sbjct: 164 GYFLQVGAYDSAEYAERQ------KGNLA----------MQGFEAKVTQREVNGTTKYRV 207
Query: 156 ----LVGIDDMKIINASIEENTVYITI-RI 180
+D+M + + ++ + V T+ R
Sbjct: 208 RLGPFNSLDEMTAVRSRLQASGVESTVIRF 237
>gi|222085403|ref|YP_002543933.1| hypothetical protein Arad_1610 [Agrobacterium radiobacter K84]
gi|221722851|gb|ACM26007.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 255
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 25/98 (25%), Gaps = 6/98 (6%)
Query: 40 PFSGFFSGKYVFSKRDERGIITLGKGKK------KDNLDSINELFPIGTRLNKVMRDIVS 93
P + ++++ + D L + S
Sbjct: 40 PPAAQPGAASKPAQQNNDKPVEQALEAPSKALPMPDPLVKSQGQSSSNATTSDASTSGKS 99
Query: 94 VYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131
+D R E IV++ G + + L++
Sbjct: 100 AEIIYDISKVPEPVRKLRETIVEAAASGDLERLRPLMN 137
>gi|124006770|ref|ZP_01691601.1| hypothetical protein M23134_08330 [Microscilla marina ATCC 23134]
gi|123987678|gb|EAY27378.1| hypothetical protein M23134_08330 [Microscilla marina ATCC 23134]
Length = 155
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 12/85 (14%)
Query: 112 EAIVDSFFEGKVHAIEKLV--DSRVY------QDFNDSLSTRKSNEKNVK---SSLVGID 160
E + +F G ++ + VY F D + ++ + K S I
Sbjct: 11 EGFIKAFEAGDTEKMKSYLADAEAVYRMPYASGMFPDVIEGKEGFHEFTKDWPSIFEKI- 69
Query: 161 DMKIINASIEENTVYITIRIVGQFI 185
D++I+ ++EN + +R + +
Sbjct: 70 DLEIVEIILDENAGKVVVRTKVELV 94
>gi|302419951|ref|XP_003007806.1| predicted protein [Verticillium albo-atrum VaMs.102]
gi|261353457|gb|EEY15885.1| predicted protein [Verticillium albo-atrum VaMs.102]
Length = 310
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 117 SFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169
+ G A+ + +Y+ +L R S + +V + +
Sbjct: 154 ALAAGDREALRAICTPALYETLGATLDKR-SRHERTTWDVVATHRTWLAAHRV 205
>gi|194756324|ref|XP_001960429.1| GF13356 [Drosophila ananassae]
gi|190621727|gb|EDV37251.1| GF13356 [Drosophila ananassae]
Length = 267
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLS-----TRKS-- 147
++F KDF+ A+ + + + G + +++ LV + + R+
Sbjct: 105 DSEFQLKDFIFGAKQALQVVSSRLMGGDLDSLDNLVAPEAISELRPVIQKLSMTQRRQLE 164
Query: 148 -NEKNVKSSLVGIDDMKIINA--SIEENTVYITIRI-VGQFISASYDKDNLL 195
E ++ S + A +++ V IT+ V + +S ++ +
Sbjct: 165 IKESDIYLSFPYQVGIMFDEANDKLQKRFVEITMVFHVMRGLSEMRERGEEI 216
>gi|218262532|ref|ZP_03476953.1| hypothetical protein PRABACTJOHN_02631 [Parabacteroides johnsonii
DSM 18315]
gi|218223318|gb|EEC95968.1| hypothetical protein PRABACTJOHN_02631 [Parabacteroides johnsonii
DSM 18315]
Length = 986
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 29/174 (16%)
Query: 50 VFSKRDERGIITLGKGKKKDNLDSINELFPIGTRL-NKVMRDIVSVYTDFDPKDFLNEAR 108
V RD+ NLD E + L +++ I + F L A+
Sbjct: 115 VARARDKENGRLQNPRLALYNLDKEEEEQGTRSDLQARIIELIGLTFEQFTRSVLL--AQ 172
Query: 109 NSYEAIVDSFFEGKVHAI-EKLVDSRVYQDFNDSLSTRKSNEKN----VKSSLVGID--- 160
N + + + +G+ ++ EKL + +Y + + R + K+ ++S + GI+
Sbjct: 173 NDFSTFLKA-EQGEKASLLEKLTGTELYSAISRQIFERNARAKDAFDLIQSRIQGIELLT 231
Query: 161 -----------------DMKIINASIEENTVYITIRIVGQFISASYDKDNLLIS 197
+I A E+ + +R V Q IS +
Sbjct: 232 DEEENDLRTRLAQAEKESQRIEKAKAEQQALQEAVRSVEQQISVRRRQQKEAAD 285
>gi|170065218|ref|XP_001867849.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882301|gb|EDS45684.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 254
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 23/48 (47%)
Query: 95 YTDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSL 142
+F DF+ A+ + + + S G++ ++ LV+ + D ++
Sbjct: 91 DREFTLPDFVQGAKQALQVVSASLAGGELKNLDGLVERQTLNDLKTAV 138
>gi|167752289|ref|ZP_02424416.1| hypothetical protein ALIPUT_00533 [Alistipes putredinis DSM 17216]
gi|167660530|gb|EDS04660.1| hypothetical protein ALIPUT_00533 [Alistipes putredinis DSM 17216]
Length = 748
Score = 35.2 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 74 INELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEA---RNSYEAIVDSFFEGKVHAI 126
+ E P+G KV +I V+ + ++ ++ IV++F G +
Sbjct: 500 VTEPVPMGFGTEKVEEEIARVFPEARVARLDRDSVTSERAFRQIVEAFARGDDDIL 555
>gi|300692743|ref|YP_003753738.1| hypothetical protein RPSI07_3128 [Ralstonia solanacearum PSI07]
gi|299079803|emb|CBJ52480.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 236
Score = 34.9 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 44/150 (29%), Gaps = 27/150 (18%)
Query: 36 GNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVSVY 95
G ++P + K ++ + + P+ + ++ R +
Sbjct: 106 GTQQPPQAPATPKPAEPAS------SVAVQRPPKPVAPPPAEKPVADPIAEIARQDAAKT 159
Query: 96 TDFDPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSS 155
F + A + +G + Q F ++ R+ N
Sbjct: 160 GYFLQVGAYDSAEYAERQ------KGNLA----------MQGFEAKVTQREVNGTTKYRV 203
Query: 156 ----LVGIDDMKIINASIEENTVYITI-RI 180
+D+M + + ++ + V T+ R
Sbjct: 204 RLGPFNSLDEMTAVRSRLQASGVESTVIRF 233
>gi|170741273|ref|YP_001769928.1| hypothetical protein M446_3084 [Methylobacterium sp. 4-46]
gi|168195547|gb|ACA17494.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 233
Score = 34.9 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 11/122 (9%)
Query: 34 KTGNEKPFSGFFSGKYVFSKRDERGIITLGKGKKKDNLDSINELFPIGTRLNKVMRDIVS 93
+ G P G + + + + +L + +L N +R + S
Sbjct: 26 RAGETAPPPGPDAAEPELPPEELARLPSLDALTPQTDLAQFLRAGVPRALRNAALRRMWS 85
Query: 94 VYTDFDPKDFLNEARN-SYEAIVDSFFEGKVHAIEKLV-DSRVYQDFNDSLS---TRKSN 148
+ +DF++EAR +++ V G V L+ V ++ R +
Sbjct: 86 LDPA--IRDFVSEAREYAWDWNVP----GDVPGAGPLLPTDDVAAMVERVIAGEPARAAP 139
Query: 149 EK 150
Sbjct: 140 GH 141
>gi|38257056|ref|NP_940710.1| methyl-accepting chemotaxis protein [Pseudomonas syringae pv.
syringae]
gi|37723833|gb|AAR02159.1| methyl-accepting chemotaxis protein [Pseudomonas syringae pv.
syringae]
Length = 540
Score = 34.9 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 111 YEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE 170
+ ++ +G + ++ L+++ + + N ++S + ++ V ++ + A +
Sbjct: 128 FSKLLTLSEQGNIESLRSLLNNELNDNHNAAISQLNLLAEKIEEETVNVNSS--VEAEYK 185
Query: 171 -----------------ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKV 206
I +R + + + + D + + D +V
Sbjct: 186 NILNLTIFFVIAVFILGGLLALIIVRSIQKPLKITVDIADRIARGDLREPIEV 238
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.152 0.452
Lambda K H
0.267 0.0466 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,768,451,765
Number of Sequences: 14124377
Number of extensions: 212860959
Number of successful extensions: 688507
Number of sequences better than 10.0: 1284
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 593
Number of HSP's that attempted gapping in prelim test: 685902
Number of HSP's gapped (non-prelim): 2001
length of query: 232
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 98
effective length of database: 2,950,127,112
effective search space: 289112456976
effective search space used: 289112456976
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 79 (34.9 bits)