HHSEARCH alignment of GI: 254780817 and SCOP domain: d1ozba_

Alignment
>d1ozba_ d.33.1.1 (A:) Bacterial protein-export protein SecB {Haemophilus influenzae [TaxId: 727]}
Probab=100.00  E-value=0  Score=313.89  Aligned_cols=141  Identities=27%  Similarity=0.575  Sum_probs=132.3

Q ss_pred             CCCHHHHEEEHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCC--CCCCCEEEEEEEEEEE
Q ss_conf             01012301301110378871677643101584158886512121465405799998404676--6543012577546899
Q gi|254780817|r    7 QAFTILNQYIKDFSFESPNAPHCFFDIQNQQPTIKINVQVNANTISGADFDVILSFDIEAKN--NDKVIFRLELAYSGIL   84 (152)
Q Consensus         7 ~~~~I~~qYIKDLSFE~P~ap~~f~~~~~~~p~~~i~i~i~~~~l~~~~~EV~l~l~~~ak~--~~~~~f~~Ei~yagif   84 (152)
                      |+|+|+++||||||||+||+|.+|.  .+|.|++++++|+++++++++.|||.|+++++++.  +++++|++|++|||+|
T Consensus         1 P~f~I~~~YiKDlSFE~Pn~p~~f~--~~~~p~~~~~i~i~~~~l~~~~~Ev~l~l~~~~~~~~~~~~~F~~e~~yagif   78 (144)
T d1ozba_           1 PVLQIQRIYVKDVSFEAPNLPHIFQ--QEWKPKLGFDLSTETTQVGDDLYEVVLNISVETTLEDSGDVAFICEVKQAGVF   78 (144)
T ss_dssp             CEEEEEEEEEEEEEEECTTTTGGGG--SCCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTTCCEEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEECCCCCCCCHHHHC--CCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEEE
T ss_conf             9604867887612333899825645--35588557888632442477741799999997413455553189987589999


Q ss_pred             EECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             97588710344466630455341789999999997389988660553989999999999986420
Q gi|254780817|r   85 RILDCPQEHISQILFVECPQLLFPFVRQIISNTIRDGGFPPLVIDTIDFLKLFQQEKSLIKNKEG  149 (152)
Q Consensus        85 ~i~~~~~~~l~~illv~~P~~lfP~~R~ii~~~~~~~Gfp~l~l~~IdF~~LY~~~~~~~~~~~~  149 (152)
                      .+.+.++++++++++|+||++||||||++|++++++|||||++|+||||++||++|++|++++++
T Consensus        79 ~i~~~~~~~~~~illi~~P~~lFP~~R~ii~~l~~~gGFppl~l~pIdF~~ly~~~~~q~~~~~~  143 (144)
T d1ozba_          79 TISGLEDVQMAHCLTSQCPNMLFPYARELVSNLVNRGTFPALNLSPVNFDALFVEYMNRQQAENA  143 (144)
T ss_dssp             EEESCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCSHHHHHHHHHHHHHHSC
T ss_pred             EECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             95489878863567406728888899999999998469998467875899999999999887605


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: SecB-like
superfamily: SecB-like
family: Bacterial protein-export protein SecB
domain: Bacterial protein-export protein SecB
species: Haemophilus influenzae [TaxId: 727]