HHsearch alignment for GI: 254780818 and conserved domain: COG5018
>COG5018 KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only].
Probab=99.36 E-value=1e-13 Score=105.71 Aligned_cols=167 Identities=21% Similarity=0.250 Sum_probs=124.7
Q ss_pred CCE-EEEECCCCC----CCCCCCEEEEEEEEEE--ECCEECCCEEEEEECCCCCC-CCHHHEEECCCCCCCCCCCCCCCH
Q ss_conf 758-999846788----8888888999999999--99988031379898588822-886572420210123224852100
Q gi|254780818|r 7 MRK-IVFDIETTG----LDSKNDRIIEIGAVEL--LDYSKTNRTFQVFLCPNGRK-NSPEALKLHGITDEFLKDKPSFSS 78 (245)
Q Consensus 7 mr~-iv~D~ETTG----l~~~~d~Iieigav~i--~~~~~~~~~f~~~i~P~~~~-i~~~~~~ihGIt~~~l~~~p~f~e 78 (245)
T Consensus 3 ~~~lLIID~EaT~~eG~~~~~e~eiiei~a~lv~~id~~v-vd~F~syVRP~~~P~Lt~~Ckslt~I~Q~~VD~apifs~ 81 (210)
T COG5018 3 TNSLLIIDFEATMPEGKYSPQEFEIIEIEAGLVKSIDDEV-VDTFSSYVRPKKFPKLTKRCKSLTKITQKQVDEAPIFSM 81 (210)
T ss_pred CCEEEEEEEEEECCCCCCCCHHCEEEEEHHHHHHHHHHHH-HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 7548999756535677877033433442236888756889-999997427543732889998862034640365504888
Q ss_pred HHHHHHHHHHCCCCE----EEEECCCCCCCEEEECHHCCCCCC-CCCCHHCCCHHCCCCCCCCCC-CCHHHHHHHHCCCC
Q ss_conf 234477753002320----231023224311210000011222-210000110000000177642-22378999718754
Q gi|254780818|r 79 IFSEFWDFFNEQNAE----WIAHNAKFDVGFINAELQRINKDP-LDPSRIIDTLSIARRKHPSSR-NDLNSLCKRYGITI 152 (245)
Q Consensus 79 v~~~f~~fi~~~~~~----lVaHNa~FD~~fL~~el~r~~~~~-~~~~~~iDTl~lar~~~p~~~-~~L~~l~~~~~i~~ 152 (245)
T Consensus 82 v~E~f~r~L~~h-~Pr~~~~wa~wG~~Dm~~l~q~~~~~~~~p~~~kgp~vdl~~~yk~v~~~pr~tgln~ale~~G~sf 160 (210)
T COG5018 82 VFEDFIRKLNEH-DPRKNSTWATWGNMDMKVLKQNCMFNHIPPFPFKGPMVDLSLEYKNVFGDPRLTGLNKALEEYGDSF 160 (210)
T ss_pred HHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
T ss_conf 999999999854-9553775020260419999999986179985345751008999878735985213789999842456
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 555666402699999999999973
Q gi|254780818|r 153 SHRSKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 153 ~~r~~H~Al~Da~~~a~v~~~ll~ 176 (245)
T Consensus 161 ~G-~~HraldDArn~~rl~klv~~ 183 (210)
T COG5018 161 TG-THHRALDDARNAYRLFKLVEQ 183 (210)
T ss_pred CC-CHHHHHHHHHHHHHHHHHHCC
T ss_conf 77-301447778889999998712