HHsearch alignment for GI: 254780818 and conserved domain: COG5018

>COG5018 KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only].
Probab=99.36  E-value=1e-13  Score=105.71  Aligned_cols=167  Identities=21%  Similarity=0.250  Sum_probs=124.7

Q ss_pred             CCE-EEEECCCCC----CCCCCCEEEEEEEEEE--ECCEECCCEEEEEECCCCCC-CCHHHEEECCCCCCCCCCCCCCCH
Q ss_conf             758-999846788----8888888999999999--99988031379898588822-886572420210123224852100
Q gi|254780818|r    7 MRK-IVFDIETTG----LDSKNDRIIEIGAVEL--LDYSKTNRTFQVFLCPNGRK-NSPEALKLHGITDEFLKDKPSFSS   78 (245)
Q Consensus         7 mr~-iv~D~ETTG----l~~~~d~Iieigav~i--~~~~~~~~~f~~~i~P~~~~-i~~~~~~ihGIt~~~l~~~p~f~e   78 (245)
T Consensus         3 ~~~lLIID~EaT~~eG~~~~~e~eiiei~a~lv~~id~~v-vd~F~syVRP~~~P~Lt~~Ckslt~I~Q~~VD~apifs~   81 (210)
T COG5018           3 TNSLLIIDFEATMPEGKYSPQEFEIIEIEAGLVKSIDDEV-VDTFSSYVRPKKFPKLTKRCKSLTKITQKQVDEAPIFSM   81 (210)
T ss_pred             CCEEEEEEEEEECCCCCCCCHHCEEEEEHHHHHHHHHHHH-HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf             7548999756535677877033433442236888756889-999997427543732889998862034640365504888


Q ss_pred             HHHHHHHHHHCCCCE----EEEECCCCCCCEEEECHHCCCCCC-CCCCHHCCCHHCCCCCCCCCC-CCHHHHHHHHCCCC
Q ss_conf             234477753002320----231023224311210000011222-210000110000000177642-22378999718754
Q gi|254780818|r   79 IFSEFWDFFNEQNAE----WIAHNAKFDVGFINAELQRINKDP-LDPSRIIDTLSIARRKHPSSR-NDLNSLCKRYGITI  152 (245)
Q Consensus        79 v~~~f~~fi~~~~~~----lVaHNa~FD~~fL~~el~r~~~~~-~~~~~~iDTl~lar~~~p~~~-~~L~~l~~~~~i~~  152 (245)
T Consensus        82 v~E~f~r~L~~h-~Pr~~~~wa~wG~~Dm~~l~q~~~~~~~~p~~~kgp~vdl~~~yk~v~~~pr~tgln~ale~~G~sf  160 (210)
T COG5018          82 VFEDFIRKLNEH-DPRKNSTWATWGNMDMKVLKQNCMFNHIPPFPFKGPMVDLSLEYKNVFGDPRLTGLNKALEEYGDSF  160 (210)
T ss_pred             HHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
T ss_conf             999999999854-9553775020260419999999986179985345751008999878735985213789999842456


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             555666402699999999999973
Q gi|254780818|r  153 SHRSKHGALLDSHLLSDVYIKMMV  176 (245)
Q Consensus       153 ~~r~~H~Al~Da~~~a~v~~~ll~  176 (245)
T Consensus       161 ~G-~~HraldDArn~~rl~klv~~  183 (210)
T COG5018         161 TG-THHRALDDARNAYRLFKLVEQ  183 (210)
T ss_pred             CC-CHHHHHHHHHHHHHHHHHHCC
T ss_conf             77-301447778889999998712