HHsearch alignment for GI: 254780818 and conserved domain: PRK06195
>PRK06195 DNA polymerase III subunit epsilon; Validated.
Probab=100.00 E-value=0 Score=308.11 Aligned_cols=164 Identities=24% Similarity=0.354 Sum_probs=147.7
Q ss_pred CCEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 75899984678888888889999999999998803137989858882288657242021012322485210023447775
Q gi|254780818|r 7 MRKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDF 86 (245)
Q Consensus 7 mr~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~f 86 (245)
T Consensus 1 m~fvviD~ETt~--~~~d~iieIg~v~v~~g~iv-~~~~~Li~P~~~~~~p~~i~ihGIt~~~v~~aP~f~ev~~~~~~f 77 (309)
T PRK06195 1 MDFVAIDFETAN--EKRNSPCSIGIVVVKDGEIV-EKVHYLIKPKEMRFMPINIGIHGIRPHMVQDELEFDKIWEKIKDY 77 (309)
T ss_pred CCEEEEEEECCC--CCCCEEEEEEEEEEECCEEE-EEEEEEECCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHH
T ss_conf 929999978999--99980599999999999999-999999899998888744640377999996599999999999998
Q ss_pred HHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCHHHHH
Q ss_conf 300232023102322431121000001122221000011000000017764-2223789997187545556664026999
Q gi|254780818|r 87 FNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSS-RNDLNSLCKRYGITISHRSKHGALLDSH 165 (245)
Q Consensus 87 i~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~-~~~L~~l~~~~~i~~~~r~~H~Al~Da~ 165 (245)
T Consensus 78 i~--~~vlVaHNa~FD~~fL~~~~~r~gl~~~-~~~~~cTl~LAR~~~p~l~~~kL~~La~~~gi~~~---hH~Al~DA~ 151 (309)
T PRK06195 78 FN--DNLVIAHNASFDISVLRKTLELYNIPMP-DFEYICTMKLAKNFYSNIPNARLNTVNNFLGYEFK---HHDALEDAM 151 (309)
T ss_pred HC--CCEEEEECCHHHHHHHHHHHHHCCCCCC-CCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCCCCC---CCCCCCCHH
T ss_conf 57--9979995628889999999998499999-99777479999986557765788899998598801---168510199
Q ss_pred HHHHHHHHHHHCCC
Q ss_conf 99999999973057
Q gi|254780818|r 166 LLSDVYIKMMVGGS 179 (245)
Q Consensus 166 ~~a~v~~~ll~g~~ 179 (245)
T Consensus 152 A~a~I~~~~~~~~~ 165 (309)
T PRK06195 152 ACSNILLNISKELN 165 (309)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999818