HHsearch alignment for GI: 254780818 and conserved domain: PRK06859
>PRK06859 consensus.
Probab=100.00 E-value=0 Score=475.77 Aligned_cols=237 Identities=39% Similarity=0.657 Sum_probs=199.8
Q ss_pred CCCCCEEEEECCCCCCCC-----CCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCH
Q ss_conf 677758999846788888-----888899999999999988031379898588822886572420210123224852100
Q gi|254780818|r 4 KNKMRKIVFDIETTGLDS-----KNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSS 78 (245)
Q Consensus 4 ~~~mr~iv~D~ETTGl~~-----~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~e 78 (245)
T Consensus 2 ~n~~R~VvlDtETTGl~p~~~~~~g~RIIEIgaVel~~~~~t~~~f~~yinP~-r~I~~~a~~vhGIT~e~L~~kP~F~e 80 (253)
T PRK06859 2 INPNRQIVLDTETTGMNQFGAHYEGHCIIEIGAVELINRRYTGNNFHIYIKPD-RPVDPDAIKVHGITDEMLADKPEFKE 80 (253)
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCC-CCCCHHHHHHHCCCHHHHHCCCCHHH
T ss_conf 88883799972179999876666898689999999999978240467887869-94998899874508999836997999
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCEEEECHHCCCCCCC--CCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 2344777530023202310232243112100000112222--10000110000000177642223789997187545556
Q gi|254780818|r 79 IFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPL--DPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRS 156 (245)
Q Consensus 79 v~~~f~~fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~--~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~~r~ 156 (245)
T Consensus 81 ia~efl~Fi~--~a~LVaHNa~FD~~FLn~El~r~g~~~~~~~~~~viDTL~lAR~~~Pg~~~sLdaLc~r~~id~~~R~ 158 (253)
T PRK06859 81 VAQEFIDYIK--GAELLIHNAPFDVGFMDYEFRKLNLNVKTDDICLVTDTLQMARQMYPGKRNNLDALCDRLGIDNSKRT 158 (253)
T ss_pred HHHHHHHHHC--CCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf 9999999967--99799957188899999999974999653220011339999998787997799999997399876633
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--
Q ss_conf 664026999999999999730576666544432111101112223-44321123563457899999999999987087--
Q gi|254780818|r 157 KHGALLDSHLLSDVYIKMMVGGSQINFGFKTNEDRFFKEEKKTVP-NISLLKRDKPLFTRITKEELDEHDKTIQTLGK-- 233 (245)
Q Consensus 157 ~H~Al~Da~~~a~v~~~ll~g~~q~~l~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~H~~~l~~l~k-- 233 (245)
T Consensus 159 ~HgAllDa~lLa~VYl~mtGGQ~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~eE~~~H~~~L~~i~kk~ 237 (253)
T PRK06859 159 LHGALLDAEILADVYLMMTGGQT-SLFDEEESEVIHVMQEKTAEEIKSAVDFSHNLKLLQPTNDELQAHLEYLKLLNKKS 237 (253)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 01328889999999998726754-45334576434443332210002233344577504799999999999999998762
Q ss_pred --CHHHHHHCCCC
Q ss_conf --81145630557
Q gi|254780818|r 234 --NAIWDRYISSN 244 (245)
Q Consensus 234 --~~lW~k~~~~~ 244 (245)
T Consensus 238 g~~~lW~k~~~~~ 250 (253)
T PRK06859 238 KNNCLWEKRLGNN 250 (253)
T ss_pred CCCCCEEECCCCC
T ss_conf 9995403311346