HHsearch alignment for GI: 254780818 and conserved domain: PRK08434

Probab=98.57  E-value=1.4e-07  Score=67.29  Aligned_cols=140  Identities=29%  Similarity=0.433  Sum_probs=84.0

Q ss_pred             CEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             58999846788888888899999999999988031379898588822886572420210123224852100234477753
Q gi|254780818|r    8 RKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDFF   87 (245)
Q Consensus         8 r~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~fi   87 (245)
T Consensus       319 ~~~a~d~Ett~ld~~~a~lvGis~~-~~~----~~a~--Yi-Pi~h----~~l---~-~~~~----~~~~~~~~~l~~~~  378 (887)
T PRK08434        319 SIIAFDTETTGLDTKEAKLVGFSFC-FNE----EEAY--YV-PLAH----SYL---G-VGEQ----ISLESAKKAIEKIF  378 (887)
T ss_pred             CEEEEEEECCCCCCCCCCEEEEEEE-ECC----CCEE--EE-ECCC----CCC---C-CHHH----CCHHHHHHHHHHHH
T ss_conf             7699995127866133430589999-559----8589--99-7521----125---7-7333----59999999978763


Q ss_pred             HCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCCCCCHHHHHHHH-CCCCC--------C----
Q ss_conf             0023202310232243112100000112222100001100000001776422237899971-87545--------5----
Q gi|254780818|r   88 NEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSSRNDLNSLCKRY-GITIS--------H----  154 (245)
Q Consensus        88 ~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~~~~L~~l~~~~-~i~~~--------~----  154 (245)
T Consensus       379 ---~~~~IghNlKyDl~vL~---~~~gi~l--~g~~fDTmLAaYLLdp~~r~~Ld~La~~yL~~~~i~~e~l~~kg~~f~  450 (887)
T PRK08434        379 ---NHFVIGHNLKYDFKIIQ---NNFGLEL--PQKYADTMILAWLKDPSSRVGLDDLAKRLFNYEMIHFESVVKKGENFS  450 (887)
T ss_pred             ---HCCCHHHHHHHHHHHHH---HHCCCCC--CCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCC
T ss_conf             ---37403647799999999---8569877--773148999998669866666678999970878774899854677702


Q ss_pred             -----CCCCCCHHHHHHHHHHHHHHH
Q ss_conf             -----566640269999999999997
Q gi|254780818|r  155 -----RSKHGALLDSHLLSDVYIKMM  175 (245)
Q Consensus       155 -----r~~H~Al~Da~~~a~v~~~ll  175 (245)
T Consensus       451 ~v~i~~a~~YAaedA~it~~L~~~l~  476 (887)
T PRK08434        451 SVDLEKACKYAAEDAWITLRFYKKFL  476 (887)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             07889999999999999999999999