HHsearch alignment for GI: 254780818 and conserved domain: PRK08816

Probab=100.00  E-value=0  Score=464.17  Aligned_cols=231  Identities=38%  Similarity=0.658  Sum_probs=194.7

Q ss_pred             CCEEEEECCCCCCCC-CCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             758999846788888-8888999999999999880313798985888228865724202101232248521002344777
Q gi|254780818|r    7 MRKIVFDIETTGLDS-KNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWD   85 (245)
Q Consensus         7 mr~iv~D~ETTGl~~-~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~   85 (245)
T Consensus         1 mR~VVlDtETTGl~~~~gdRIIEIgaV~~~~~~~~~~~f~~~inP~-r~I~~~a~~vhGIT~e~L~dkP~F~eV~~efl~   79 (244)
T PRK08816          1 MRQIILDTETTGLEWRKGNRVVEIGAVELLERRPSGNNFHRYLKPD-CDFEPGAQEVTGLTLEFLADKPLFGEVVDEFLA   79 (244)
T ss_pred             CCEEEEEEECCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCC-CCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
T ss_conf             9879997227998998998899999999999968143789986889-969988987525178998409989999999999


Q ss_pred             HHHCCCCEEEEECCCCCCCEEEECHHCCCCCC---CCCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf             53002320231023224311210000011222---210000110000000177642223789997187545556664026
Q gi|254780818|r   86 FFNEQNAEWIAHNAKFDVGFINAELQRINKDP---LDPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALL  162 (245)
Q Consensus        86 fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~---~~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~~r~~H~Al~  162 (245)
T Consensus        80 Fi~--ds~LVaHNa~FDi~FLn~El~r~g~~~~~~~~~~~v~DTl~lAr~~~Pg~~nsLDaLc~r~~id~~~R~~HgALl  157 (244)
T PRK08816         80 YID--GAELIIHNAAFDLGFLDNELSLLGDQYGRIVDRATVVDTLMMARERYPGQRNSLDALCKRLGVDNSHRQLHGALL  157 (244)
T ss_pred             HHC--CCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHH
T ss_conf             828--998999663652989999999848875676431010438999998787997789999997497887735014888


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---CHHHHH
Q ss_conf             99999999999973057666654443211110111222344321123563457899999999999987087---811456
Q gi|254780818|r  163 DSHLLSDVYIKMMVGGSQINFGFKTNEDRFFKEEKKTVPNISLLKRDKPLFTRITKEELDEHDKTIQTLGK---NAIWDR  239 (245)
Q Consensus       163 Da~~~a~v~~~ll~g~~q~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~H~~~l~~l~k---~~lW~k  239 (245)
T Consensus       158 Da~lLa~VYl~mtgGq~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~s~~El~aH~~~L~~i~k~~g~~lW~~  235 (244)
T PRK08816        158 DAQILADVYIALTSGQEEIGFASADAGQQ--ADAASGMIAFDPALLLPRPRVVVTASELQAHEARLAQLRKKAGRALWDA  235 (244)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             79999999999747865554566664433--4454441001532125555678999999999999999876448771689


Q ss_pred             HCC
Q ss_conf             305
Q gi|254780818|r  240 YIS  242 (245)
Q Consensus       240 ~~~  242 (245)
T Consensus       236 ~~~  238 (244)
T PRK08816        236 PVE  238 (244)
T ss_pred             CCC
T ss_conf             775