HHsearch alignment for GI: 254780818 and conserved domain: PRK08858

>PRK08858 consensus.
Probab=100.00  E-value=0  Score=459.58  Aligned_cols=230  Identities=42%  Similarity=0.730  Sum_probs=195.3

Q ss_pred             CCCCCCEEEEECCCCCCCCC------CCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCC
Q ss_conf             66777589998467888888------888999999999999880313798985888228865724202101232248521
Q gi|254780818|r    3 RKNKMRKIVFDIETTGLDSK------NDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSF   76 (245)
Q Consensus         3 ~~~~mr~iv~D~ETTGl~~~------~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f   76 (245)
T Consensus         6 ~~~~~R~VVlDtETTGl~~~~~~~~~gdRIIEIgaV~i~~~~~t~~~f~~~InP~-r~Ip~~a~~ihGIT~e~L~daP~F   84 (246)
T PRK08858          6 NSEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPD-REIQPEAIDVHGITDEFLVDKPEY   84 (246)
T ss_pred             CCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCEEEEEECCC-CCCCHHHHHHCCCCHHHHHCCCCH
T ss_conf             8760479999857899997656777898799999999999998221478888979-969988997739289998359758


Q ss_pred             CHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECHHCCCCCCC---CCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             002344777530023202310232243112100000112222---10000110000000177642223789997187545
Q gi|254780818|r   77 SSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPL---DPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITIS  153 (245)
Q Consensus        77 ~ev~~~f~~fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~---~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~  153 (245)
T Consensus        85 ~eI~~efl~FI~--d~~LVaHNa~FD~~FLn~El~r~~~~~~~~~~~~~viDTL~lAR~~~Pg~~~sLdaLc~r~~Id~s  162 (246)
T PRK08858         85 KDVHQEFLEFIK--GAELVAHNAPFDVGFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNS  162 (246)
T ss_pred             HHHHHHHHHHHC--CCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHHCCCCCC
T ss_conf             999999999958--998999722888999999999828776751342010029999998689998888999998198988


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             55666402699999999999973057666654443211110111222344321123563457899999999999987087
Q gi|254780818|r  154 HRSKHGALLDSHLLSDVYIKMMVGGSQINFGFKTNEDRFFKEEKKTVPNISLLKRDKPLFTRITKEELDEHDKTIQTLGK  233 (245)
Q Consensus       154 ~r~~H~Al~Da~~~a~v~~~ll~g~~q~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~H~~~l~~l~k  233 (245)
T Consensus       163 ~R~~HgALlDa~lLa~Vyl~mtgGQ~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~vi~~s~eE~~~H~~~L~~i~k  238 (246)
T PRK08858        163 HRTLHGALLDAEILADVYLLMTGGQTSLEFSANKQEGGLSAETIK----RVRSGRKALKVLRATADELEAHQKRLDIVNK  238 (246)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH----HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             834023088899999999997289876444667654444421012----1003466775157999999999999999732


Q ss_pred             --CHHHHH
Q ss_conf             --811456
Q gi|254780818|r  234 --NAIWDR  239 (245)
Q Consensus       234 --~~lW~k  239 (245)
T Consensus       239 ~~~~lWrk  246 (246)
T PRK08858        239 SGTCLWRQ  246 (246)
T ss_pred             HCCCCCCC
T ss_conf             06786589