HHsearch alignment for GI: 254780818 and conserved domain: PRK08858
>PRK08858 consensus.
Probab=100.00 E-value=0 Score=459.58 Aligned_cols=230 Identities=42% Similarity=0.730 Sum_probs=195.3
Q ss_pred CCCCCCEEEEECCCCCCCCC------CCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCC
Q ss_conf 66777589998467888888------888999999999999880313798985888228865724202101232248521
Q gi|254780818|r 3 RKNKMRKIVFDIETTGLDSK------NDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSF 76 (245)
Q Consensus 3 ~~~~mr~iv~D~ETTGl~~~------~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f 76 (245)
T Consensus 6 ~~~~~R~VVlDtETTGl~~~~~~~~~gdRIIEIgaV~i~~~~~t~~~f~~~InP~-r~Ip~~a~~ihGIT~e~L~daP~F 84 (246)
T PRK08858 6 NSEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPD-REIQPEAIDVHGITDEFLVDKPEY 84 (246)
T ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCEEEEEECCC-CCCCHHHHHHCCCCHHHHHCCCCH
T ss_conf 8760479999857899997656777898799999999999998221478888979-969988997739289998359758
Q ss_pred CHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECHHCCCCCCC---CCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 002344777530023202310232243112100000112222---10000110000000177642223789997187545
Q gi|254780818|r 77 SSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPL---DPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITIS 153 (245)
Q Consensus 77 ~ev~~~f~~fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~---~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~ 153 (245)
T Consensus 85 ~eI~~efl~FI~--d~~LVaHNa~FD~~FLn~El~r~~~~~~~~~~~~~viDTL~lAR~~~Pg~~~sLdaLc~r~~Id~s 162 (246)
T PRK08858 85 KDVHQEFLEFIK--GAELVAHNAPFDVGFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNS 162 (246)
T ss_pred HHHHHHHHHHHC--CCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHHCCCCCC
T ss_conf 999999999958--998999722888999999999828776751342010029999998689998888999998198988
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 55666402699999999999973057666654443211110111222344321123563457899999999999987087
Q gi|254780818|r 154 HRSKHGALLDSHLLSDVYIKMMVGGSQINFGFKTNEDRFFKEEKKTVPNISLLKRDKPLFTRITKEELDEHDKTIQTLGK 233 (245)
Q Consensus 154 ~r~~H~Al~Da~~~a~v~~~ll~g~~q~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~H~~~l~~l~k 233 (245)
T Consensus 163 ~R~~HgALlDa~lLa~Vyl~mtgGQ~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~vi~~s~eE~~~H~~~L~~i~k 238 (246)
T PRK08858 163 HRTLHGALLDAEILADVYLLMTGGQTSLEFSANKQEGGLSAETIK----RVRSGRKALKVLRATADELEAHQKRLDIVNK 238 (246)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH----HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 834023088899999999997289876444667654444421012----1003466775157999999999999999732
Q ss_pred --CHHHHH
Q ss_conf --811456
Q gi|254780818|r 234 --NAIWDR 239 (245)
Q Consensus 234 --~~lW~k 239 (245)
T Consensus 239 ~~~~lWrk 246 (246)
T PRK08858 239 SGTCLWRQ 246 (246)
T ss_pred HCCCCCCC
T ss_conf 06786589