HHsearch alignment for GI: 254780818 and conserved domain: pfam10108

>pfam10108 Exon_PolB Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. This domain is found in various prokaryotic 3'-5' exonucleases and hypothetical proteins.
Probab=97.48  E-value=0.001  Score=43.22  Aligned_cols=128  Identities=16%  Similarity=0.205  Sum_probs=75.5

Q ss_pred             CCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC-C
Q ss_conf             888899999999999988031379898588822886572420210123224852100234477753002320231023-2
Q gi|254780818|r   22 KNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDFFNEQNAEWIAHNA-K  100 (245)
Q Consensus        22 ~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~fi~~~~~~lVaHNa-~  100 (245)
T Consensus         7 ~lhriVaIs~v~~~~~~~~-~-v~slg~~----------------------~~~E~~ll~~F~~~i~~~~P~LVs~NG~g   62 (211)
T pfam10108         7 PLHRIVAISAVIADDDGGF-K-VWSLGDP----------------------ESSEKELIQRFFDGIEKYTPQLVSFNGRG   62 (211)
T ss_pred             CCEEEEEEEEEEEECCCCE-E-EEECCCC----------------------CCCHHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf             6501699999999669927-9-9878899----------------------98999999999999984398288656865


Q ss_pred             CCCCEEEECHHCCCCCCCC------------------CCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC---
Q ss_conf             2431121000001122221------------------0000110000000177642223789997187545556664---
Q gi|254780818|r  101 FDVGFINAELQRINKDPLD------------------PSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRSKHG---  159 (245)
Q Consensus       101 FD~~fL~~el~r~~~~~~~------------------~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~~r~~H~---  159 (245)
T Consensus        63 FDlPvL~~RAl~~gi~ap~~~~~~~~~~kw~nY~~Ry~~~H~DLmd~l~~~g~~~~~~Ld~~a~l~G~PGK~-~~~G~~V  141 (211)
T pfam10108        63 FDLPVLHYRALKHGVSAPRYFDTGDRDFKWNNYFNRYSTRHLDLMDLLSGYGARANAPLDEVAALLGLPGKM-GVDGSQV  141 (211)
T ss_pred             CCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCC-CCCHHHH
T ss_conf             548999999998188850787567876654441123565445489998732886778989999981999878-7764589


Q ss_pred             ---------------CHHHHHHHHHHHHHH
Q ss_conf             ---------------026999999999999
Q gi|254780818|r  160 ---------------ALLDSHLLSDVYIKM  174 (245)
Q Consensus       160 ---------------Al~Da~~~a~v~~~l  174 (245)
T Consensus       142 ~~~~~~G~l~~I~~YCe~DvlnTylv~LR~  171 (211)
T pfam10108       142 WELYQAGKIEEIRDYCETDVLNTYLVYLRF  171 (211)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999985988899999887689999999999