HHsearch results for GI: 254780818 and protein with PDBid: 1uoc_A
>1uoc_A POP2; hydrolase, DEDD nuclease, mRNA degradation, poly(A) tail, transcription regulation, repressor, phosphorylation.; 2.3A {Saccharomyces cerevisiae} SCOP: c.55.3.9
Probab=98.47 E-value=1.6e-07 Score=65.63 Aligned_cols=167 Identities=16% Similarity=0.149 Sum_probs=99.6
Q ss_pred CCEEEEECCCCCCCCC-----CC----------------EEEEEEEEEEEC-C-EE----CCCEEEEEECCCCCCCCHHH
Q ss_conf 7589998467888888-----88----------------899999999999-9-88----03137989858882288657
Q gi|254780818|r 7 MRKIVFDIETTGLDSK-----ND----------------RIIEIGAVELLD-Y-SK----TNRTFQVFLCPNGRKNSPEA 59 (245)
Q Consensus 7 mr~iv~D~ETTGl~~~-----~d----------------~Iieigav~i~~-~-~~----~~~~f~~~i~P~~~~i~~~~ 59 (245)
=.+|.+|+|-||+..+ .+ .|||+|..-... + .. ..-.|..+..|......+++
T Consensus 38 ~~fVAiD~Ef~Gi~~~~~~~~~~t~~~rY~~lk~nv~~~~iiQlGlt~f~~~g~~~~~~~~~w~FNf~~~~~~~~~~~~S 117 (289)
T 1uoc_A 38 YNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPDNGPSTWQFNFEFDPKKEIMSTES 117 (289)
T ss_dssp SCEEEEEEEEEC----------CHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCCCSSSCSEEEEEBCCCTTCCCCCHHH
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCHHH
T ss_conf 99899962517845788866689999999999986643632469999870488768887147899774486202325778
Q ss_pred EE---ECCCCCCCC-CCCCCCCHHHHHHHH--HHHCCCCEEEEECCCCCCCEEEECHHCCCCC------------CCCCC
Q ss_conf 24---202101232-248521002344777--5300232023102322431121000001122------------22100
Q gi|254780818|r 60 LK---LHGITDEFL-KDKPSFSSIFSEFWD--FFNEQNAEWIAHNAKFDVGFINAELQRINKD------------PLDPS 121 (245)
Q Consensus 60 ~~---ihGIt~~~l-~~~p~f~ev~~~f~~--fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~------------~~~~~ 121 (245)
++ -||+.-... ..+-++..-.+.+.. .+...+.++|+||..+|+.+|-.-|.-..+| .+ .
T Consensus 118 i~fL~~~G~DFnk~~~~GI~~~~f~~~~~~s~l~~~~~~~wv~f~g~yD~~yl~k~l~~~~LP~~~~~F~~~~~~~F--p 195 (289)
T 1uoc_A 118 LELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYM--P 195 (289)
T ss_dssp HHHHHHTTCCHHHHHHHCBCHHHHHHHHHTSSCSSCTTSEEEESSTTHHHHHHHHHHTTSCCCSSHHHHHHHHHHHC--S
T ss_pred HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC--C
T ss_conf 99999859986899971998888889987500442478628960435579999999718989999999999999987--6
Q ss_pred HHCCCHHCCCCC---CC-----------CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 001100000001---77-----------64222378999718754555666402699999999999973
Q gi|254780818|r 122 RIIDTLSIARRK---HP-----------SSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 122 ~~iDTl~lar~~---~p-----------~~~~~L~~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~ll~ 176 (245)
.++||-.+++.. .. ..+.+|..+++.+++.... .+|.|-+||.+|+.||++|..
T Consensus 196 ~iyDtK~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~va~~l~v~r~g-~~HeAG~DS~lTg~~F~~l~~ 263 (289)
T 1uoc_A 196 NFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTTLADELGLPRFS-IFTTTGGQSLLMLLSFCQLSK 263 (289)
T ss_dssp SEEEHHHHHHHHTTTCC-------------CCSHHHHHHHTTCCCCG-GGGSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHHHHHHH
T ss_conf 26139999986213357543433221012348888999872998778-886607899999999999999