HHsearch results for GI: 254780818 and protein with PDBid: 1x9m_A
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=99.38 E-value=2.9e-13 Score=101.52 Aligned_cols=138 Identities=21% Similarity=0.239 Sum_probs=86.4
Q ss_pred EEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99984678888888889999999999998803137989858882288657242021012322485210023447775300
Q gi|254780818|r 10 IVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDFFNE 89 (245)
Q Consensus 10 iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~fi~~ 89 (245)
||||+|||||++..+.|.-|++ .+. .+++ +..| +|.. +.+.++.+..++.
T Consensus 2 ~v~DiET~gL~~~~~~i~~i~~---~d~-~~~~-~~~~-~~~~-----------------------~~~~~~~l~~~l~- 51 (698)
T 1x9m_A 2 IVSDIEANALLESVTKFHCGVI---YDY-STAE-YVSY-RPSD-----------------------FGAYLDALEAEVA- 51 (698)
T ss_dssp EEEEEEESSCGGGCCCEEEEEE---EET-TTTE-EEEE-CGGG-----------------------HHHHHHHHHHHHH-
T ss_pred EEEECCCCCCCCCCCEEEEEEE---EEC-CCCE-EEEE-CCCC-----------------------HHHHHHHHHHHHH-
T ss_conf 8999168997756787999999---978-9972-8984-7654-----------------------0579999999985-
Q ss_pred CCCEEEEECC-CCCCCEEEECHHC-CCC-CCCCCCHHCCCHHCCCCCCCC-------------CCCCHHHHHHHHCCCCC
Q ss_conf 2320231023-2243112100000-112-222100001100000001776-------------42223789997187545
Q gi|254780818|r 90 QNAEWIAHNA-KFDVGFINAELQR-INK-DPLDPSRIIDTLSIARRKHPS-------------SRNDLNSLCKRYGITIS 153 (245)
Q Consensus 90 ~~~~lVaHNa-~FD~~fL~~el~r-~~~-~~~~~~~~iDTl~lar~~~p~-------------~~~~L~~l~~~~~i~~~ 153 (245)
+...+|+||+ .||+.+|++-+.. .+. -..+...++|||.++|...|. .++||++++.++|....
T Consensus 52 ~~~~lVgHN~~~FD~~~L~k~~g~~~~~~~~~~~~~v~DTmi~s~ll~p~~~~~~~~~~~~~~~~hsL~a~g~rlg~~K~ 131 (698)
T 1x9m_A 52 RGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYRLGEMKG 131 (698)
T ss_dssp TTCCEEESSTTTTHHHHHHHHHHHHHCCCCCCCGGGEEEHHHHHHHHTTTSCCCTTTTSCGGGSCSCCCHHHHHHHHHHH
T ss_pred CCCEEEECCCHHCCHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCC
T ss_conf 59969975723208999988738742334566778750277887663998644431122026678788999998586543
Q ss_pred ---------------------------CCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf ---------------------------556664026999999999999730
Q gi|254780818|r 154 ---------------------------HRSKHGALLDSHLLSDVYIKMMVG 177 (245)
Q Consensus 154 ---------------------------~r~~H~Al~Da~~~a~v~~~ll~g 177 (245)
..-.+-|..|+.+|..+|..|...
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~em~~Ya~~Dv~iT~~L~~~l~~~ 182 (698)
T 1x9m_A 132 EYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSD 182 (698)
T ss_dssp HHHHHHHHHHHHTTCCCCTTGGGTSCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 137776432221022334413343348999999998999999999999998