HHsearch results for GI: 254780818 and protein with PDBid: 1y97_A
>1y97_A Three prime repair exonuclease 2; TREX2, hydrolase; 2.50A {Homo sapiens} SCOP: c.55.3.5
Probab=100.00 E-value=4.8e-35 Score=237.59 Aligned_cols=169 Identities=24% Similarity=0.318 Sum_probs=133.8
Q ss_pred CCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCE---------------ECCCEEEEEECCCCCCCCHHHEEECCCCCCC
Q ss_conf 7775899984678888888889999999999998---------------8031379898588822886572420210123
Q gi|254780818|r 5 NKMRKIVFDIETTGLDSKNDRIIEIGAVELLDYS---------------KTNRTFQVFLCPNGRKNSPEALKLHGITDEF 69 (245)
Q Consensus 5 ~~mr~iv~D~ETTGl~~~~d~Iieigav~i~~~~---------------~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~ 69 (245)
+...+||||+||||+++..|+|||||||.+.+.. .+.+.|+.||+|. +++++.+.+|||||+++
T Consensus 8 ~~~~~vvlD~ETTGl~~~~~~Iiei~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~P~-~~i~~~~~~i~git~~~ 86 (238)
T 1y97_A 8 RAETFVFLDLEATGLPSVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPE-RPFTAKASEITGLSSEG 86 (238)
T ss_dssp CCSEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHTSCBC---CCCBCCSSCEEEEEECCCS-SCCCHHHHHHHCCCHHH
T ss_pred CCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCEEEEECCC-CCCCHHHHHHCCCCHHH
T ss_conf 89979999988189899998669999999989952223100002456662102135788889-98998899860899999
Q ss_pred CCCCCC--CC----HHHHHHHHHHHCCCCEEEEECC-CCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCC-------
Q ss_conf 224852--10----0234477753002320231023-224311210000011222210000110000000177-------
Q gi|254780818|r 70 LKDKPS--FS----SIFSEFWDFFNEQNAEWIAHNA-KFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHP------- 135 (245)
Q Consensus 70 l~~~p~--f~----ev~~~f~~fi~~~~~~lVaHNa-~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p------- 135 (245)
|.+++. +. +++..|.+++. .+.++||||+ .||..||+++|.|+|..+.....++||+.++|.+.+
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~hn~~~FD~~~L~~~~~r~~~~~~~~~~~iDtl~~~~~l~~~~~~~~~ 165 (238)
T 1y97_A 87 LARCRKAGFDGAVVRTLQAFLSRQA-GPICLVAHNGFDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSHGTR 165 (238)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHTTSC-SSEEEEETTTTTTHHHHHHHHHHHHTCCCCTTCEEEEHHHHHHHHHHHC-----
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCC
T ss_conf 9853153058999999999887416-882699965187789999999998089888898787789999997350754445
Q ss_pred --C-CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf --6-4222378999718754555666402699999999999973
Q gi|254780818|r 136 --S-SRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 136 --~-~~~~L~~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~ll~ 176 (245)
+ .+.+|++||++|+... ..++|+|+.||++|++||++|..
T Consensus 166 ~~~~~~~~L~~l~~~~~~~~-~~~aH~Al~Da~~t~~i~~~l~~ 208 (238)
T 1y97_A 166 ARGRQGYSLGSLFHRYFRAE-PSAAHSAEGDVHTLLLIFLHRAA 208 (238)
T ss_dssp -----CCSHHHHHHHHHSSC-CC---CHHHHHHHHHHHHHHTHH
T ss_pred CCCCCCCCHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 66668858999999964999-89788989999999999999999