HHsearch results for GI: 254780818 and protein with PDBid: 2a1r_A
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase/RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=98.59 E-value=3.2e-07 Score=63.75 Aligned_cols=87 Identities=22% Similarity=0.156 Sum_probs=56.0
Q ss_pred CCCCEEEEECCCCCCCEEEECHHCCCCCC--------C--CCCHHCCCHHCCCCC--C-CCCCCCHHHHHHHHCCCC---
Q ss_conf 02320231023224311210000011222--------2--100001100000001--7-764222378999718754---
Q gi|254780818|r 89 EQNAEWIAHNAKFDVGFINAELQRINKDP--------L--DPSRIIDTLSIARRK--H-PSSRNDLNSLCKRYGITI--- 152 (245)
Q Consensus 89 ~~~~~lVaHNa~FD~~fL~~el~r~~~~~--------~--~~~~~iDTl~lar~~--~-p~~~~~L~~l~~~~~i~~--- 152 (245)
..+.++||||.-+|+-|+-..|-. .+|. + ....++||--++... - ....-+|..+...++-..
T Consensus 279 ~~~kpiVgHN~~~Dl~~~~~~f~~-~LP~~~~eFk~~v~~~FP~i~DTK~l~~~~~~~~~~~~t~L~~l~~~l~~~~~~~ 357 (430)
T 2a1r_A 279 NSGKLVIGHNMLLDVMHTVHQFYC-PLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNP 357 (430)
T ss_dssp HHCCEEEESSCHHHHHHHHHHHTC-CCCSSHHHHHHHHHHHCSSEEEHHHHHTSTTTTTTCSCCSHHHHHHHTTSTTCCC
T ss_pred HCCCCEEECCHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 659977866428889999987158-9997899999999987673004376531366446788866899999972067899
Q ss_pred --------------CCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf --------------555666402699999999999973
Q gi|254780818|r 153 --------------SHRSKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 153 --------------~~r~~H~Al~Da~~~a~v~~~ll~ 176 (245)
....+|.|-.||.+|+.||+.|..
T Consensus 358 p~i~~~~~~~~~~~~~~~~HeAGyDA~mTG~vF~~l~~ 395 (430)
T 2a1r_A 358 PKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMAN 395 (430)
T ss_dssp CCEEECTTCCCC-----CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 83433766665568899861708899999999999999