HHsearch results for GI: 254780818 and protein with PDBid: 2d5r_A
>2d5r_A CCR4-NOT transcription complex subunit 7; poly(A) deadenylase, antiproliferative protein, transcription; 2.50A {Homo sapiens} SCOP: c.55.3.9
Probab=98.75 E-value=9.8e-09 Score=73.20 Aligned_cols=169 Identities=15% Similarity=0.186 Sum_probs=102.3
Q ss_pred CEEEEECCCCCCCCC-----CC----------------EEEEEEEEEEECC--EECC-CE--EEEEECCCCCCCCHHHEE
Q ss_conf 589998467888888-----88----------------8999999999999--8803-13--798985888228865724
Q gi|254780818|r 8 RKIVFDIETTGLDSK-----ND----------------RIIEIGAVELLDY--SKTN-RT--FQVFLCPNGRKNSPEALK 61 (245)
Q Consensus 8 r~iv~D~ETTGl~~~-----~d----------------~Iieigav~i~~~--~~~~-~~--f~~~i~P~~~~i~~~~~~ 61 (245)
.+|.+|||-||+-.+ .+ .|||+|..-.... .... .+ |..+.+|......+++++
T Consensus 25 ~fvAiDtEfpGl~~~~~~~~~~~~~~~Y~~lr~nv~~~~iiQlGlt~~~~~g~~~~~~~~w~FNf~f~~~~d~~~~~Si~ 104 (252)
T 2d5r_A 25 NYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIE 104 (252)
T ss_dssp CEEEEEEECCCCCCCCCSCCSSHHHHHHHHHHHHHTTCCCCEEEEEEECTTSCCCSSCCEEEEEBCCCTTTSCCCHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHH
T ss_conf 98999867068457887655799899999999877540303789898624787788861277998777976653778999
Q ss_pred ---ECCCCCCCC-CCCCCCCHHHHHHHH--HHHCCCCEEEEECCCCCCCEEEECHHCCCCCC----------CCCCHHCC
Q ss_conf ---202101232-248521002344777--53002320231023224311210000011222----------21000011
Q gi|254780818|r 62 ---LHGITDEFL-KDKPSFSSIFSEFWD--FFNEQNAEWIAHNAKFDVGFINAELQRINKDP----------LDPSRIID 125 (245)
Q Consensus 62 ---ihGIt~~~l-~~~p~f~ev~~~f~~--fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~----------~~~~~~iD 125 (245)
=||+.-..+ ..+-++.+-.+.+.. .+..++.++|+||..||+.||-..|.-..+|. .-...++|
T Consensus 105 fL~~~GfDF~k~~~~GI~~~~f~ell~~s~~~~~~~v~wv~f~g~yD~~~L~k~l~g~~LP~~~~~F~~~~~~~Fp~~yD 184 (252)
T 2d5r_A 105 LLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYD 184 (252)
T ss_dssp HHHHHTCCHHHHHHHCBCHHHHHHHHHTTTSSSSSSCEEEESSCHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHCSCEEE
T ss_pred HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHEE
T ss_conf 99986997789998097389999988861143258973787134578999999980999997789999999997734604
Q ss_pred CHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 00000001776422237899971875455566640269999999999997305
Q gi|254780818|r 126 TLSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMVGG 178 (245)
Q Consensus 126 Tl~lar~~~p~~~~~L~~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~ll~g~ 178 (245)
|-.+++.. ++.+.+|..+++.++++--. .+|.|-+||.+|+.+|.+|....
T Consensus 185 ~K~i~~~~-~~~~~~L~~la~~L~v~r~g-~~H~AG~DSllT~~~F~~l~~~~ 235 (252)
T 2d5r_A 185 VKYLMKSC-KNLKGGLQEVAEQLELERIG-PQHQAGSDSLLTGMAFFKMREMF 235 (252)
T ss_dssp HHHHGGGC-TTCCSSHHHHHHHHTCCCCS-STTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHC-CCCCCHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 69898445-66576499999976999879-87653678999999999999997