HHsearch results for GI: 254780818 and protein with PDBid: 2hhv_A
>2hhv_A DNA polymerase I; DNA replication, klenow fragment, protein- DNA complex, O6-methyl-guanine, transferase/DNA complex; HET: DNA 6OG SUC; 1.55A {Geobacillus stearothermophilus} SCOP: c.55.3.5 e.8.1.1 PDB: 2hhs_A* 2hht_A* 2hhu_A* 2hhq_A* 2hhx_A* 2hw3_A* 1nk4_A* 1l3t_A* 1l3u_A* 1l3v_A* 1l5u_A* 1njw_A* 1l3s_A* 1njy_A* 1njz_A* 1nk0_A* 1njx_A* 1nk5_A* 1nk6_A* 1nk7_A* ...
Probab=98.96 E-value=9.6e-10 Score=79.50 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=88.8
Q ss_pred CEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 58999846788888888899999999999988031379898588822886572420210123224852100234477753
Q gi|254780818|r 8 RKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDFF 87 (245)
Q Consensus 8 r~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~fi 87 (245)
..++|||||||+|+..++|+-|+.- ..+ +. + |+-|. .. . ..+.|..|+
T Consensus 18 ~~~a~~~e~~~~~~~~~~ivGis~~-~~~----~~-~--~y~p~------~~-----~-------------~~~~l~~~l 65 (580)
T 2hhv_A 18 DKAALVVEVVEENYHDAPIVGIAVV-NEH----GR-F--FLRPE------TA-----L-------------ADPQFVAWL 65 (580)
T ss_dssp SEEEEEEECCSSSCTTCCCCEEEEE-ETT----EE-E--EECHH------HH-----T-------------TCHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCEEEEEEEE-ECC----CE-E--EEECC------CC-----C-------------CHHHHHHHH
T ss_conf 8847999769997350728999999-669----77-9--99453------54-----6-------------648999996
Q ss_pred HCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCC-CCCHHHHHHHHCCCCC-C----------C
Q ss_conf 00232023102322431121000001122221000011000000017764-2223789997187545-5----------5
Q gi|254780818|r 88 NEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSS-RNDLNSLCKRYGITIS-H----------R 155 (245)
Q Consensus 88 ~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~-~~~L~~l~~~~~i~~~-~----------r 155 (245)
...+...|+||+.||+.+| .++|... ...++||+..+..+.|+. +++|+.++.+|+.... . .
T Consensus 66 ~d~~~~ki~hN~k~D~~~L----~~~Gi~l--~g~~~DTmiaa~ll~~~~~~~~L~~l~~~~~~~~~~~~~~~~gk~~~~ 139 (580)
T 2hhv_A 66 GDETKKKSMFDSKRAAVAL----KWKGIEL--CGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKR 139 (580)
T ss_dssp HCTTSEEEESSHHHHHHHH----HTTTCCC--CCEEEEHHHHHHHHCGGGCCCSHHHHHHTTTCCSSCCHHHHHCSGGGC
T ss_pred CCCCCCEEEEEHHHHHHHH----HHCCCCC--CCCEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCC
T ss_conf 6999865885279999999----9788827--997328999999759999988899999986799878488751877100
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHH
Q ss_conf -------666402699999999999973
Q gi|254780818|r 156 -------SKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 156 -------~~H~Al~Da~~~a~v~~~ll~ 176 (245)
-..-|..||.+|.++|..|..
T Consensus 140 ~~~~~~~~~~Ya~~Da~~t~~L~~~l~~ 167 (580)
T 2hhv_A 140 AVPDEPVLAEHLVRKAAAIWELERPFLD 167 (580)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2632799999999999999999999999