HHsearch results for GI: 254780818 and protein with PDBid: 2kfn_A
>2kfn_A Klenow fragment of DNA polymerase I; complex (polymerase/DNA), exonuclease, transferase, transferase/DNA complex; HET: US1; 2.03A {Escherichia coli} SCOP: c.55.3.5 e.8.1.1 PDB: 1d9f_A* 1d9d_A* 1krp_A* 1ksp_A* 1qsl_A* 1kfs_A* 2kfz_A* 2kzm_A* 2kzz_A* 1dpi_A* 1kfd_A* 1kln_A* 1d8y_A*
Probab=99.19 E-value=4e-11 Score=88.14 Aligned_cols=117 Identities=19% Similarity=0.288 Sum_probs=76.2
Q ss_pred CCEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 75899984678888888889999999999998803137989858882288657242021012322485210023447775
Q gi|254780818|r 7 MRKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDF 86 (245)
Q Consensus 7 mr~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~f 86 (245)
...++||||||||||..++|+-|+. ...+ +..| || | +. |.... ..+.-.-.++++.+.++
T Consensus 26 ~~~~a~D~ETt~ld~~~~~ivgis~-s~~~----~~~~--yi-p----i~------h~~~~--~~~~~~~~~vl~~Lk~~ 85 (605)
T 2kfn_A 26 APVFAFDTETDSLDNISANLVGLSF-AIEP----GVAA--YI-P----VA------HDYLD--APDQISRERALELLKPL 85 (605)
T ss_dssp SSSEEEEEEESCSCTTTCCEEEEEE-EEET----TEEE--EE-E----CC------CCSTT--CCCCCCHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCCCEEEEEEE-ECCC----CEEE--EE-E----EC------CCCCC--CCCCCCHHHHHHHHHHH
T ss_conf 9949998317999836574999999-8249----8599--99-8----22------66677--75558999999999999
Q ss_pred HHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCCC-CCHHHHHHHHC
Q ss_conf 3002320231023224311210000011222210000110000000177642-22378999718
Q gi|254780818|r 87 FNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSSR-NDLNSLCKRYG 149 (245)
Q Consensus 87 i~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~~-~~L~~l~~~~~ 149 (245)
+...+.+.|+||+.||+.||. ++|... .+.+.||+.+++...|+.+ ..++.++.++.
T Consensus 86 l~~~~i~kV~HNakFD~~~L~----~~Gi~l--~~~~~DTmiaa~ll~~~~~~~~l~~~~~~~l 143 (605)
T 2kfn_A 86 LEDEKALKVGQNLKYDRGILA----NYGIEL--RGIAFDTMLESYILNSVAGRHDMDSLAERWL 143 (605)
T ss_dssp HTCTTSCEEESSHHHHHHHHH----TTTCCC--CCEEEEHHHHHHHHCTTSSCCSHHHHHHHHS
T ss_pred HHCCCCCEEEECHHHHHHHHH----HCCCCC--CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHC
T ss_conf 818999799972699999999----779988--9840207778777256555565899999863