HHsearch results for GI: 254780818 and protein with PDBid: 2qxf_A
>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, product bound structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli K12} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=99.97 E-value=9.5e-33 Score=223.24 Aligned_cols=173 Identities=21% Similarity=0.234 Sum_probs=134.3
Q ss_pred CCCCC--CCCEEEEECCCCCCCCCCCEEEEEEEEEEEC-CEECCCEEEE-EECCC-CCCCCHHHEEECCCCCCCCCCCC-
Q ss_conf 98667--7758999846788888888899999999999-9880313798-98588-82288657242021012322485-
Q gi|254780818|r 1 MIRKN--KMRKIVFDIETTGLDSKNDRIIEIGAVELLD-YSKTNRTFQV-FLCPN-GRKNSPEALKLHGITDEFLKDKP- 74 (245)
Q Consensus 1 ~~~~~--~mr~iv~D~ETTGl~~~~d~Iieigav~i~~-~~~~~~~f~~-~i~P~-~~~i~~~~~~ihGIt~~~l~~~p- 74 (245)
|.+.+ +..+|++|+||||++|..|+|||+|||.+.. +.++ ++++. +++|. +...+|.|..|||||++++.++|
T Consensus 1 ~~~~~~~~~~~v~~D~ETTGl~~~~d~iiq~~ai~~d~~~~~~-~~~~~~~~~~~~~~~p~~~a~~v~gi~~~~~~~~~~ 79 (482)
T 2qxf_A 1 MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVI-GEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGE 79 (482)
T ss_dssp ------CCCEEEEEEEEESSSCTTTSCEEEEEEEEECTTSCBC-SCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCB
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCC
T ss_conf 9877786897899998878979999822899999998998585-145677634799999887896884949999973999
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEC-CCCCCCEEEECHHCCCCCCC-----CCCHHCCCHHCCCCC---------CC----
Q ss_conf 210023447775300232023102-32243112100000112222-----100001100000001---------77----
Q gi|254780818|r 75 SFSSIFSEFWDFFNEQNAEWIAHN-AKFDVGFINAELQRINKDPL-----DPSRIIDTLSIARRK---------HP---- 135 (245)
Q Consensus 75 ~f~ev~~~f~~fi~~~~~~lVaHN-a~FD~~fL~~el~r~~~~~~-----~~~~~iDTl~lar~~---------~p---- 135 (245)
++.+++.++.+|+...++++|||| +.||..||+.+|.|.+.++. ..+...|++.+++.. +|
T Consensus 80 ~~~e~~~~i~~~~~~~~~~~vg~N~~~FD~~~l~~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (482)
T 2qxf_A 80 NEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDD 159 (482)
T ss_dssp CHHHHHHHHHHHHTSTTEEEEESSTTTTHHHHHHHHHHHTTSCSSGGGTGGGCEEEEHHHHHHHHHHHCCTTSCCCBCTT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999984489769996763347999999988744785012202687502568888888640442212432346
Q ss_pred C-CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6-4222378999718754555666402699999999999973
Q gi|254780818|r 136 S-SRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 136 ~-~~~~L~~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~ll~ 176 (245)
| .+.+|+++|.++|++.. ++|+|++||.+|++|+..+..
T Consensus 160 ~~~~~kL~~l~~~~~i~~~--~aHdA~~D~~~t~~l~~~l~~ 199 (482)
T 2qxf_A 160 GLPSFRLEHLTKANGIEHS--NAHDAMADVYATIAMAKLVKT 199 (482)
T ss_dssp SSBCCCHHHHHHHTTCCCC-----CTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCC--CCCCHHHHHHHHHHHHHHHHH
T ss_conf 8664669999998199877--886635517999999999987