HHsearch results for GI: 254780818 and protein with PDBid: 3cg7_A
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=100.00 E-value=1.1e-33 Score=229.04 Aligned_cols=173 Identities=14% Similarity=0.265 Sum_probs=137.0
Q ss_pred CEEEEECCCCCCCCCCC---EEEEEEEEEEEC--C-EECCCEEEEEECCC-CCCCCHHHEEECCCCCCCCCCCCCCCHHH
Q ss_conf 58999846788888888---899999999999--9-88031379898588-82288657242021012322485210023
Q gi|254780818|r 8 RKIVFDIETTGLDSKND---RIIEIGAVELLD--Y-SKTNRTFQVFLCPN-GRKNSPEALKLHGITDEFLKDKPSFSSIF 80 (245)
Q Consensus 8 r~iv~D~ETTGl~~~~d---~Iieigav~i~~--~-~~~~~~f~~~i~P~-~~~i~~~~~~ihGIt~~~l~~~p~f~ev~ 80 (245)
.+||||+||||+++..| +|||||||.++. + +....+|++||+|. ..++++.+.++||||+++|.++|+|.+|+
T Consensus 20 ~~vViD~ETTg~~~~~d~~~EIIEIgaV~vd~~~~~i~~~~~F~~~VkP~~~~~ls~~~~~ltGIt~e~v~~ap~f~evl 99 (308)
T 3cg7_A 20 TLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFDVVY 99 (308)
T ss_dssp EEEEEEEEECCBTTBCSCCCCEEEEEEEEEETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBHHHHH
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHH
T ss_conf 18999976089987889996079999999980599897841888778988888679889987197989943110045668
Q ss_pred HHHHHHHHCCCCEEEEE------CCCCCC-CEEEECHHCCCCCCCC-CCHHCCCHHCCCCCC-------CCCCCCHHHHH
Q ss_conf 44777530023202310------232243-1121000001122221-000011000000017-------76422237899
Q gi|254780818|r 81 SEFWDFFNEQNAEWIAH------NAKFDV-GFINAELQRINKDPLD-PSRIIDTLSIARRKH-------PSSRNDLNSLC 145 (245)
Q Consensus 81 ~~f~~fi~~~~~~lVaH------Na~FD~-~fL~~el~r~~~~~~~-~~~~iDTl~lar~~~-------p~~~~~L~~l~ 145 (245)
++|.+|++. ..+++| |+.||. .||++++.+.+++.+. ...++|+..+++..+ ++.+.+|+++|
T Consensus 100 ~~f~~~l~~--~~l~~~~~~f~~~~~~D~~~~L~~~~~~~~i~~P~~~~~~iDl~~~~~~~~~~~~~~~~~~~~~L~~l~ 177 (308)
T 3cg7_A 100 EQFQQWLIT--LGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMN 177 (308)
T ss_dssp HHHHHHHHH--HCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGGGSEEEEHHHHHHHHHHHHCCCCCCCCSHHHHHH
T ss_pred HHHHHHHHC--CCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 899999736--773232899931545669999999999809998720132445999999999974322777777899999
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 97187545556664026999999999999730576666
Q gi|254780818|r 146 KRYGITISHRSKHGALLDSHLLSDVYIKMMVGGSQINF 183 (245)
Q Consensus 146 ~~~~i~~~~r~~H~Al~Da~~~a~v~~~ll~g~~q~~l 183 (245)
.+|||+.+. ++|+||.||++||+|+++|+..|-...+
T Consensus 178 ~~~gI~~~g-~aH~ALdDA~~tA~Il~kLl~~G~~~~~ 214 (308)
T 3cg7_A 178 EYYDLPTIG-RAHDAMDDCLNIATILQRMINMGAKVTV 214 (308)
T ss_dssp HHTTCCCCS-CTTCHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 976999999-8968099999999999999977992586