BLAST/PSIBLAST alignment of GI: 254780818 and GI: 116249771 at iteration 1
>gi|116249771|ref|YP_765609.1| DNA polymerase III subunit epsilon [Rhizobium leguminosarum bv. viciae 3841] Length = 240
>gi|115254419|emb|CAK05493.1| putative DNA polymerase subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 240
 Score =  238 bits (606), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 8/239 (3%)

Query: 7   MRKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGIT 66
           MR+I+FD ETTGLD++ DRIIEIG +EL ++  T  T  +F+ P  +K  P+AL +HGIT
Sbjct: 1   MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNTIHIFINPGDQKVHPDALAVHGIT 60

Query: 67  DEFLKDKPSFSSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDT 126
           DEFLKDK  F+ +  +   FF   +A+WIAHNA FD+GFINAE  RI   P+ P R++DT
Sbjct: 61  DEFLKDKQPFAEVAEQILTFFG--DAKWIAHNATFDMGFINAEFARIGLPPILPERVLDT 118

Query: 127 LSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMVGGSQINFGF- 185
           LS+ARRKHP   N L++LC+RYGI  SHR+KHGALLDS LL++VYI+ M+GG Q   G  
Sbjct: 119 LSMARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIE-MIGGRQAALGLG 177

Query: 186 ---KTNE-DRFFKEEKKTVPNISLLKRDKPLFTRITKEELDEHDKTIQTLGKNAIWDRY 240
              K+N+  R     +  V   +LL+R +PL  R+++ E   H+  +  LG+ ++W +Y
Sbjct: 178 MVGKSNQAARGEMGMEDDVVIAALLERPRPLAPRLSQTEEQAHEALVAKLGEKSVWAKY 236