RPSBLAST alignment for GI: 254780818 and conserved domain: TIGR01407

>gnl|CDD|162341 TIGR01407, dinG_rel, DnaQ family exonuclease/DinG family helicase, putative. This model represents a family of proteins in Gram-positive bacteria. The N-terminal region of about 200 amino acids resembles the epsilon subunit of E. coli DNA polymerase III and the homologous region of the Gram-positive type DNA polymerase III alpha subunit. The epsilon subunit contains an exonuclease domain. The remainder of this protein family resembles a predicted ATP-dependent helicase, the DNA damage-inducible protein DinG of E. coli. Length = 850
 Score = 78.3 bits (193), Expect = 2e-15
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 8/168 (4%)

Query: 8   RKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITD 67
           R  V D+ETTG     D+II+IG V +++  +   TF   + PN     P   +L GI+D
Sbjct: 1   RYAVVDLETTGTQLSFDKIIQIGIV-VVEDGEIVDTFHTDVNPN-EPIPPFIQELTGISD 58

Query: 68  EFLKDKPSFSSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTL 127
             L+  P FS +  E +D    ++  ++AHN  FD+ F+   L+    +PL P   IDT+
Sbjct: 59  NMLQQAPYFSQVAQEIYDLL--EDGIFVAHNVHFDLNFLAKALKDCGYEPL-PKPRIDTV 115

Query: 128 SIARRKHPSSRN-DLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKM 174
            +A+   P+  +  L+ L +  G+T  H + H A  D+   +++ + +
Sbjct: 116 ELAQIFFPTEESYQLSELSEALGLT--HENPHRADSDAQATAELLLLL 161