HHsearch alignment for GI: 254780820 and conserved domain: KOG0368

Probab=96.65  E-value=0.004  Score=44.29  Aligned_cols=141  Identities=18%  Similarity=0.295  Sum_probs=89.1

Q ss_pred             HHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCC-----
Q ss_conf             999845565420133456870201867642035667766642166771699987870414999998330318535-----
Q gi|254780820|r   62 RLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSI-----  136 (284)
Q Consensus        62 Ri~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSm-----  136 (284)
T Consensus      1818 ~~~GlFDk~SF~Eil~~--------W-------------------AktVV~GRArLgGIPvGVIavEtrtve~~vPADPa 1870 (2196)
T KOG0368        1818 WLSGLFDKGSFDEILSG--------W-------------------AKTVVTGRARLGGIPVGVIAVETRTVENIVPADPA 1870 (2196)
T ss_pred             CCCCCCCCCCHHHHHHH--------H-------------------HHHHEECCEECCCCCEEEEEEEEEEEEEECCCCCC
T ss_conf             40154357748888767--------7-------------------66744301002785347899875442222237988


Q ss_pred             ----------------CHHHHHHHHHHHHHHHHHCCCEEEEE----CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ----------------77899999999999986289689997----688877-652124677778899999999862998
Q gi|254780820|r  137 ----------------GIAAGEAIVKSCERAIAEKCPLVMFT----ASGGAR-MQEGILSLMQLPRTTIAINMLKDAGLP  195 (284)
Q Consensus       137 ----------------G~~~geki~~a~e~A~~~~~PlI~~~----~SGGaR-MqEG~~sL~qMakt~~a~~~l~~~~lP  195 (284)
T Consensus      1871 n~dS~e~i~q~AGQVWyPdSAfKTaQAInDFNrEqLPLmIiAnwRGFSGGqkDMy~~VLkfG--a~I---VDaL~~YkQP 1945 (2196)
T KOG0368        1871 NLDSEEQITQEAGQVWYPDSAFKTAQAINDFNREQLPLMIIANWRGFSGGQKDMYDQVLKFG--AYI---VDALRQYKQP 1945 (2196)
T ss_pred             CCCCHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH--HHH---HHHHHHHCCC
T ss_conf             99717667542785446715777899876525222876875302466764237899999877--899---9999974786


Q ss_pred             EEEEEC--CCCCCEEEEEECCC------------CC----EEEEECCCE--EECCCHHHHHH
Q ss_conf             899856--76420111120146------------85----255531421--10232788787
Q gi|254780820|r  196 YIVVLT--NPTTGGVTASYAML------------GD----IHLAEPGAE--IGFAGRRVIEQ  237 (284)
Q Consensus       196 ~I~vl~--~pt~GGv~AS~a~l------------gD----iiiaep~a~--igFaG~rVi~~  237 (284)
T Consensus      1946 v~vYIPp~gELRGG---sWvVvD~tIn~~~memyAD~~sRggVLEPeg~v~IKfRre~Lle~ 2004 (2196)
T KOG0368        1946 VLVYIPPMGELRGG---SWVVVDPTINPDQMEMYADEESRGGVLEPEGVVEIKFRREMLLEM 2004 (2196)
T ss_pred             EEEECCCCHHHCCC---EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHH
T ss_conf             28975870222385---299975867989988875255206400577638999507999999