HHsearch alignment for GI: 254780820 and conserved domain: PRK06266
>PRK06266 transcription initiation factor E subunit alpha; Validated.
Probab=90.32 E-value=0.24 Score=31.11 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=29.5
Q ss_pred CCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEE
Q ss_conf 74601056676872217889863383889989624
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDLKENQWVISSSDFHMK 56 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~r 56 (284)
T Consensus 113 ~~~~FY~C~~c~~R~tFeeAme~~F~CP~CG~~Le 147 (178)
T PRK06266 113 ENNMFFVCPNGHPKFTFDEAMEYGFRCPQCGEMLE 147 (178)
T ss_pred HCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCE
T ss_conf 45987888999830059999883996999988663