HHsearch alignment for GI: 254780820 and conserved domain: PRK07629
>PRK07629 consensus.
Probab=97.90 E-value=0.0026 Score=45.63 Aligned_cols=149 Identities=14% Similarity=0.164 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HHCCCEEEEECCC-----CCCCC---C----C-HHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 85357789999999999998-6289689997688-----87765---2----1-24677778899999999862998899
Q gi|254780820|r 133 GGSIGIAAGEAIVKSCERAI-AEKCPLVMFTASG-----GARMQ---E----G-ILSLMQLPRTTIAINMLKDAGLPYIV 198 (284)
Q Consensus 133 GGSmG~~~geki~~a~e~A~-~~~~PlI~~~~SG-----GaRMq---E----G-~~sL~qMakt~~a~~~l~~~~lP~I~ 198 (284)
T Consensus 25 ~Nal~~~m~~el~~a~~~~~~d~~vrvvvltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa 104 (261)
T PRK07629 25 RNAFNETMIAELTAAFRALDADDDVRAVVLAARGPAFCAGADLNWMKRMAGYSDDENRADARKLARMLRTIYECPKPTIA 104 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 68979999999999999996299916999977998214676708888511367255677799999999999958998999
Q ss_pred EECCCCCCEEEEEECCCCCEEEEECCCEEECC-----------CHHHHHHHHCCC------CCCCCHHHHHHHHCCCCCE
Q ss_conf 85676420111120146852555314211023-----------278878763677------8872021599996898353
Q gi|254780820|r 199 VLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA-----------GRRVIEQTVREK------LPDGFQRSEYLVEHGMIDR 261 (284)
Q Consensus 199 vl~~pt~GGv~AS~a~lgDiiiaep~a~igFa-----------G~rVi~~t~~~~------lp~~fqtae~l~~~G~iD~ 261 (284)
T Consensus 105 av~G~a~GgG-~~lal~~D~ria~~~a~f~~p~~~~Gl~p~~~~~~~~-r~iG~~~a~~llltg~~~~a~eA~~~Glv~~ 182 (261)
T PRK07629 105 RVHGDAYAGG-MGLVAACDIAVAADTAKFCLSEVRLGLIPATISPYVI-RAMGERAARRYFLTAERFDAAEALRLGFVHE 182 (261)
T ss_pred EECCEEECCH-HHHHHHCCEEECCCCCEEECHHCCCCCCCCCHHHHHH-HHHCHHHHHHHHHHCCCCCHHHHHHCCCCEE
T ss_conf 9789544360-7997733421314787575510344617775588999-9978999999998687226999997798618
Q ss_pred EECHHHHHHHHHHHHHHHHCCC
Q ss_conf 7358999999999999972378
Q gi|254780820|r 262 IVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 262 iv~r~~l~~~i~~ll~il~~~~ 283 (284)
T Consensus 183 vv~~~~l~~~a~~~A~~la~~s 204 (261)
T PRK07629 183 VVPADALDAKVAELAAALVANG 204 (261)
T ss_pred ECCHHHHHHHHHHHHHHHHCCC
T ss_conf 7386799999999999998469