HHsearch alignment for GI: 254780820 and conserved domain: PRK10949
>PRK10949 protease 4; Provisional.
Probab=97.55 E-value=0.0013 Score=47.82 Aligned_cols=123 Identities=22% Similarity=0.312 Sum_probs=80.8
Q ss_pred CCCCCEEEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCC--CEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 6677169998787041499999833031853577899999999999986289--68999768887765212467777889
Q gi|254780820|r 105 GLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKC--PLVMFTASGGARMQEGILSLMQLPRT 182 (284)
Q Consensus 105 g~~davv~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~--PlI~~~~SGGaRMqEG~~sL~qMakt 182 (284)
T Consensus 325 ~~~IAVI~a~G~Iv~---------G~---~~~g~ig~dt~~~~lr~a~~D~~VKAvVLRVnSPG----GSa~ASE~---I 385 (618)
T PRK10949 325 GGQIAVIFANGAIMD---------GE---ETPGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPG----GSVTASEV---I 385 (618)
T ss_pred CCEEEEEEEEEEEEC---------CC---CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCC----CCHHHHHH---H
T ss_conf 983899996876854---------88---87886655899999999730867228999985899----86678999---9
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCEEEEE----ECCCCCEEEEECCCE---EE-CCCHHHHHHHHCCCC---CCCCHHHH
Q ss_conf 99999998629988998567642011112----014685255531421---10-232788787636778---87202159
Q gi|254780820|r 183 TIAINMLKDAGLPYIVVLTNPTTGGVTAS----YAMLGDIHLAEPGAE---IG-FAGRRVIEQTVREKL---PDGFQRSE 251 (284)
Q Consensus 183 ~~a~~~l~~~~lP~I~vl~~pt~GGv~AS----~a~lgDiiiaep~a~---ig-FaG~rVi~~t~~~~l---p~~fqtae 251 (284)
T Consensus 386 ~~el~~lk~~gKPVVvS-----MG~vAASGGYwIa~~Ad~I~A~p~TITGSIGVfg~~p~~~~~l~-~lGI~~D~V~t~~ 459 (618)
T PRK10949 386 RAELAAARAAGKPVVVS-----MGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTVENSLD-SIGVHTDGVSTSP 459 (618)
T ss_pred HHHHHHHHHCCCCEEEE-----ECCCCCCCCEEEECCCCEEEECCCCEEEECEEEEEHHHHHHHHH-HCCCEEEEEECCC
T ss_conf 99999998449979999-----70101566258851687699889867886404776104999999-6495246885456
Q ss_pred H
Q ss_conf 9
Q gi|254780820|r 252 Y 252 (284)
Q Consensus 252 ~ 252 (284)
T Consensus 460 ~ 460 (618)
T PRK10949 460 L 460 (618)
T ss_pred C
T ss_conf 7