HHsearch alignment for GI: 254780820 and conserved domain: PRK10949
>PRK10949 protease 4; Provisional.
Probab=96.28 E-value=0.15 Score=32.69 Aligned_cols=140 Identities=15% Similarity=0.204 Sum_probs=88.7
Q ss_pred HHCCCCC---HHHHHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 3185357---789999999999998-628968999768887765212467777889999999986299889985676420
Q gi|254780820|r 131 FIGGSIG---IAAGEAIVKSCERAI-AEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTG 206 (284)
Q Consensus 131 F~GGSmG---~~~geki~~a~e~A~-~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~G 206 (284)
T Consensus 84 ~~g~~~~~~~e~~L~Div~aI~~Aa~D~rI~givLdl~~~~g--~~~---a~l~eI~~AL~~FK~SGK~ViAy~d~ysq~ 158 (618)
T PRK10949 84 LLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVLDLKNFAG--ADQ---PSMQYIGKALREFRDSGKPVYAVGDNYSQG 158 (618)
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCC--CCH---HHHHHHHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf 517887754410299999999985149982599997777888--788---999999999999998199399996677853
Q ss_pred EEEEEECCCCCEEEEECCCEEECCCHHHHHH-------------------------------------------------
Q ss_conf 1111201468525553142110232788787-------------------------------------------------
Q gi|254780820|r 207 GVTASYAMLGDIHLAEPGAEIGFAGRRVIEQ------------------------------------------------- 237 (284)
Q Consensus 207 Gv~AS~a~lgDiiiaep~a~igFaG~rVi~~------------------------------------------------- 237 (284)
T Consensus 159 ~Yy--LAS~AD~I~L~P~G~v~l~Gl~~~~~y~K~lLdKlgI~~~vfrvG~YKSAvEpf~r~~MS~e~re~~~~~l~~lw 236 (618)
T PRK10949 159 QYY--LASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 236 (618)
T ss_pred CEE--EEEECCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 010--211077789889966878663011778999999749828999813756746511144599999999999999999
Q ss_pred -----HH--CCCCC-CCC----------------HHHHHHHHCCCCCEEECHHHHHHHHHHHHH
Q ss_conf -----63--67788-720----------------215999968983537358999999999999
Q gi|254780820|r 238 -----TV--REKLP-DGF----------------QRSEYLVEHGMIDRIVHRHDIPEVVSSLCK 277 (284)
Q Consensus 238 -----t~--~~~lp-~~f----------------qtae~l~~~G~iD~iv~r~~l~~~i~~ll~ 277 (284)
T Consensus 237 ~~~~~~Ia~~R~l~~~~l~~~~~~~~~~l~~~~g~~a~~Al~~gLVD~l~~~~e~~~~l~~~~g 300 (618)
T PRK10949 237 QNYLNTVAANRQITPQQLFPGAQGILEGLTKVGGDTAKYALDNKLVDALASSAEIEKALTKAFG 300 (618)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9999999986599978977779999999987088409999876998546768899999999848