HHsearch alignment for GI: 254780820 and conserved domain: PRK11154

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=95.33  E-value=0.34  Score=29.99  Aligned_cols=155  Identities=15%  Similarity=0.231  Sum_probs=86.1

Q ss_pred             EEEEEEECH-HHCCCCCHHHHHHHHHHHHHHHHHCC-C-EEEEECCC-----CCCCCC--CH---HHHHHHHH-HHHHHH
Q ss_conf             999998330-31853577899999999999986289-6-89997688-----877652--12---46777788-999999
Q gi|254780820|r  122 LVAVVHEFS-FIGGSIGIAAGEAIVKSCERAIAEKC-P-LVMFTASG-----GARMQE--GI---LSLMQLPR-TTIAIN  187 (284)
Q Consensus       122 vvv~~~df~-F~GGSmG~~~geki~~a~e~A~~~~~-P-lI~~~~SG-----GaRMqE--G~---~sL~qMak-t~~a~~  187 (284)
T Consensus        16 Ia~itlnrP~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~sg~g~~F~AGaDl~~~~~~~~~~~~~~~~~~~~~~~~   95 (706)
T PRK11154         16 IAILTIDVPGEKMNTLKAEFAEQVRAILKQIKEDKSLKGVVFISGKPDNFIAGADINMLAACKTAQEAEALARQGQQLFA   95 (706)
T ss_pred             EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             89999899997767899999999999999985099966999951799804707297767247875779999988899999


Q ss_pred             HHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC--CCEEECC----------C-----HHHHHHH--HCCCCCCCCH
Q ss_conf             998629988998567642011112014685255531--4211023----------2-----7887876--3677887202
Q gi|254780820|r  188 MLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEP--GAEIGFA----------G-----RRVIEQT--VREKLPDGFQ  248 (284)
Q Consensus       188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep--~a~igFa----------G-----~rVi~~t--~~~~lp~~fq  248 (284)
T Consensus        96 ~i~~~~kPvIAAvnG~a~GgG-~ElaLacD~RiAs~~a~~~~g~Pev~lGl~Pg~Ggt~rLpRliG~~~A~eliltG~~i  174 (706)
T PRK11154         96 EIEALPIPVVAAIHGACLGGG-LELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQL  174 (706)
T ss_pred             HHHHCCCCEEEEECCEEEHHH-HHHHHHCCEEEECCCCCCCCCCCCCEECCCCCCCCHHHCCHHCCHHHHHHHHHCCCCC
T ss_conf             998099988999878641899-9999968999961784632136431027788997240221123899999764007878


Q ss_pred             HHHHHHHCCCCCEEECHHHHHHHHHHHHH
Q ss_conf             15999968983537358999999999999
Q gi|254780820|r  249 RSEYLVEHGMIDRIVHRHDIPEVVSSLCK  277 (284)
Q Consensus       249 tae~l~~~G~iD~iv~r~~l~~~i~~ll~  277 (284)
T Consensus       175 ~A~eA~~~GLVd~VVp~~~L~~~A~~~a~  203 (706)
T PRK11154        175 RAKQALKLGLVDDVVPQSILLEVAVELAK  203 (706)
T ss_pred             CHHHHHHCCCCCEECCCHHHHHHHHHHHH
T ss_conf             89999977987551590899999999998