HHsearch alignment for GI: 254780820 and conserved domain: PRK11154
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=95.33 E-value=0.34 Score=29.99 Aligned_cols=155 Identities=15% Similarity=0.231 Sum_probs=86.1
Q ss_pred EEEEEEECH-HHCCCCCHHHHHHHHHHHHHHHHHCC-C-EEEEECCC-----CCCCCC--CH---HHHHHHHH-HHHHHH
Q ss_conf 999998330-31853577899999999999986289-6-89997688-----877652--12---46777788-999999
Q gi|254780820|r 122 LVAVVHEFS-FIGGSIGIAAGEAIVKSCERAIAEKC-P-LVMFTASG-----GARMQE--GI---LSLMQLPR-TTIAIN 187 (284)
Q Consensus 122 vvv~~~df~-F~GGSmG~~~geki~~a~e~A~~~~~-P-lI~~~~SG-----GaRMqE--G~---~sL~qMak-t~~a~~ 187 (284)
T Consensus 16 Ia~itlnrP~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~sg~g~~F~AGaDl~~~~~~~~~~~~~~~~~~~~~~~~ 95 (706)
T PRK11154 16 IAILTIDVPGEKMNTLKAEFAEQVRAILKQIKEDKSLKGVVFISGKPDNFIAGADINMLAACKTAQEAEALARQGQQLFA 95 (706)
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 89999899997767899999999999999985099966999951799804707297767247875779999988899999
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC--CCEEECC----------C-----HHHHHHH--HCCCCCCCCH
Q ss_conf 998629988998567642011112014685255531--4211023----------2-----7887876--3677887202
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEP--GAEIGFA----------G-----RRVIEQT--VREKLPDGFQ 248 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep--~a~igFa----------G-----~rVi~~t--~~~~lp~~fq 248 (284)
T Consensus 96 ~i~~~~kPvIAAvnG~a~GgG-~ElaLacD~RiAs~~a~~~~g~Pev~lGl~Pg~Ggt~rLpRliG~~~A~eliltG~~i 174 (706)
T PRK11154 96 EIEALPIPVVAAIHGACLGGG-LELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQL 174 (706)
T ss_pred HHHHCCCCEEEEECCEEEHHH-HHHHHHCCEEEECCCCCCCCCCCCCEECCCCCCCCHHHCCHHCCHHHHHHHHHCCCCC
T ss_conf 998099988999878641899-9999968999961784632136431027788997240221123899999764007878
Q ss_pred HHHHHHHCCCCCEEECHHHHHHHHHHHHH
Q ss_conf 15999968983537358999999999999
Q gi|254780820|r 249 RSEYLVEHGMIDRIVHRHDIPEVVSSLCK 277 (284)
Q Consensus 249 tae~l~~~G~iD~iv~r~~l~~~i~~ll~ 277 (284)
T Consensus 175 ~A~eA~~~GLVd~VVp~~~L~~~A~~~a~ 203 (706)
T PRK11154 175 RAKQALKLGLVDDVVPQSILLEVAVELAK 203 (706)
T ss_pred CHHHHHHCCCCCEECCCHHHHHHHHHHHH
T ss_conf 89999977987551590899999999998