HHsearch alignment for GI: 254780820 and conserved domain: PRK11730
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=96.69 E-value=0.086 Score=34.43 Aligned_cols=145 Identities=21% Similarity=0.248 Sum_probs=90.5
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC-----CCCCCC-------CHHHHHHH-HHHHHHHHHHHHCCCCEE
Q ss_conf 18535778999999999999862-89689997688-----877652-------12467777-889999999986299889
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG-----GARMQE-------GILSLMQL-PRTTIAINMLKDAGLPYI 197 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG-----GaRMqE-------G~~sL~qM-akt~~a~~~l~~~~lP~I 197 (284)
T Consensus 27 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~AGaDl~e~~~~~~~~~~~~~~~~~~~~~~~~~ie~~~kPvI 106 (715)
T PRK11730 27 SVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAVPEEELSQWLHFANSIFNRLEDLPVPTV 106 (715)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 67898999999999999998509997599997899815727087878525468878898888888999999971999889
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEECCCEEECC-----------C----HHHHHHHH--CCCCCCCCHHHHHHHHCCCCC
Q ss_conf 985676420111120146852555314211023-----------2----78878763--677887202159999689835
Q gi|254780820|r 198 VVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA-----------G----RRVIEQTV--REKLPDGFQRSEYLVEHGMID 260 (284)
Q Consensus 198 ~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFa-----------G----~rVi~~t~--~~~lp~~fqtae~l~~~G~iD 260 (284)
T Consensus 107 AAI~G~AlGgG-lelALacd~Rias~~a~~g~pev~lGl~pg~Ggt~rLprliG~~~A~~l~l~G~~~~a~~A~~~GLvd 185 (715)
T PRK11730 107 AAINGYALGGG-CECVLATDYRVASPTARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAEDALKVGAVD 185 (715)
T ss_pred EEECCEEEHHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCC
T ss_conf 99888842798-99999689999639988978654757287984253754132699997354117978899998689864
Q ss_pred EEECHHHHHHHHHHHHH
Q ss_conf 37358999999999999
Q gi|254780820|r 261 RIVHRHDIPEVVSSLCK 277 (284)
Q Consensus 261 ~iv~r~~l~~~i~~ll~ 277 (284)
T Consensus 186 ~vv~~~~L~~~A~~~a~ 202 (715)
T PRK11730 186 AVVAPEKLQEAALALLK 202 (715)
T ss_pred EECCHHHHHHHHHHHHH
T ss_conf 62580678999999999