>TIGR03549 conserved hypothetical protein TIGR03549. This family consists of remarkably well-conserved proteins from gamma and beta Proteobacteria, heavily skewed towards organisms of marine environments. This family has an OsmC-like N-terminal domain. It shares a central domain, modeled by pfam02624 and TIGR00702, with other families of smaller proteins. The function is unknown. Fifteen of the first sixteen members of this family are from selenouridine-positive genomes, but this correlation may be fortuitous.

Probab=91.24 E-value=0.39 Score=29.63 Aligned_cols=90 Identities=23% Similarity=0.333 Sum_probs=58.2 Q ss_pred EECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCC--------- Q ss_conf 8330318535778999999999999862896899976888776---5212467777889999999986299--------- Q gi|254780820|r 127 HEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM---QEGILSLMQLPRTTIAINMLKDAGL--------- 194 (284) Q Consensus 127 ~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM---qEG~~sL~qMakt~~a~~~l~~~~l--------- 194 (284) T Consensus 325 SNGMSAGNTl~EArVQ~LSEIFER~VK~~II------~e~isLP~IP~e--VlaryP~I~~~I~~Le~~Gfpv~v~DASL 396 (718) T TIGR03549 325 SNGMSAGNTLAEAQVQCLSEIFERAVKKEII------EEEIVLPDVPQE--VLAKYPGILAGIKALEEQGFPVLVKDASL 396 (718) T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH------HCCCCCCCCCHH--HHHHCCCHHHHHHHHHHCCCCEEEEECCC T ss_conf 1762247878999999999999999999998------614788887699--99857309999999986798279985456 Q ss_pred ----CEEE-EECCCCCCEEEEEECCCCCEEEEECC Q ss_conf ----8899-85676420111120146852555314 Q gi|254780820|r 195 ----PYIV-VLTNPTTGGVTASYAMLGDIHLAEPG 224 (284) Q Consensus 195 ----P~I~-vl~~pt~GGv~AS~a~lgDiiiaep~ 224 (284) T Consensus 397 GG~fPVmcVtL~NP~ng~~FASFGAHP~feVALER 431 (718) T TIGR03549 397 GGQFPVMCVTLMNPRTGGVFASFGAHPSFEVALER 431 (718) T ss_pred CCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHH T ss_conf 89775589997717999579871578625788999

HHsearch alignment for GI: 254780820 and conserved domain: TIGR03549