HHsearch alignment for GI: 254780820 and conserved domain: pfam06833
>pfam06833 MdcE Malonate decarboxylase gamma subunit (MdcE). This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase.
Probab=98.10 E-value=2.3e-05 Score=60.90 Aligned_cols=156 Identities=18% Similarity=0.247 Sum_probs=118.7
Q ss_pred CCCEEEEEEEE-ECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH--HCCCEEEEECCCCCCCC--CCHHHHHH-HH
Q ss_conf 77169998787-041499999833031853577899999999999986--28968999768887765--21246777-78
Q gi|254780820|r 107 IDSIVSAVGNV-RDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA--EKCPLVMFTASGGARMQ--EGILSLMQ-LP 180 (284)
Q Consensus 107 ~davv~G~G~I-~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~--~~~PlI~~~~SGGaRMq--EG~~sL~q-Ma 180 (284)
T Consensus 16 ~~~v~~G~~~~~~~r~vaViG~~~---~~~vG~~ea~~LA~~Vld~i~~~~~rpIl~lvD~~~Q~~~rrdEllGi~~~lA 92 (234)
T pfam06833 16 SGDVLDGEATTRDVGPVAVIGTAN---GGEVGVLEAIALAAAVLEAIEQRDKRPILALVDTPSQALSRRDELLGINQALA 92 (234)
T ss_pred CCCEEECCCCCCCCCEEEEEECCC---CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 485686332467885699983589---87440999999999999999719998779998077654334899840999999
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCH----HHHHHHHC--C----CCCCCCHHH
Q ss_conf 8999999998629988998567642011112014685255531421102327----88787636--7----788720215
Q gi|254780820|r 181 RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGR----RVIEQTVR--E----KLPDGFQRS 250 (284)
Q Consensus 181 kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~----rVi~~t~~--~----~lp~~fqta 250 (284)
T Consensus 93 hla~~~~~AR~~GHpvI~Lv~g~a~sGaFla~gl~a~~~~ALp~a~i~vM~~~a~ARvTk~~ve~L~~la~s~pvfApgv 172 (234)
T pfam06833 93 HLAKAYDLARLAGHPVIGLLYGKAMSGAFLAHGLQANRLIALPGAMVHVMDLAAMARVTKRSVEALEALAASSPVFAPGV 172 (234)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCH
T ss_conf 99999999997599769987544011899998876352311798503117847767774077999998863499767787
Q ss_pred HHHHHCCCCCEEECH
Q ss_conf 999968983537358
Q gi|254780820|r 251 EYLVEHGMIDRIVHR 265 (284)
Q Consensus 251 e~l~~~G~iD~iv~r 265 (284)
T Consensus 173 ~n~~~lG~v~~l~~~ 187 (234)
T pfam06833 173 DNYASMGALWALWDV 187 (234)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 899983018988366