HHsearch results for GI: 254780820 and protein with PDBid: 1on3_A
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=99.70 E-value=1.9e-15 Score=133.85 Aligned_cols=200 Identities=20% Similarity=0.231 Sum_probs=155.1
Q ss_pred CCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHH
Q ss_conf 89624379999998455654201334568702018676420356677666421667716999878704149999983303
Q gi|254780820|r 52 DFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSF 131 (284)
Q Consensus 52 ~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F 131 (284)
+.......|+-|..++|.++|.|+... | ..++|||.++|+|++|.+.+.|..+
T Consensus 285 ~~~~~yd~r~vi~~v~D~~~f~E~~~~--------------~-------------g~~~vtg~aRl~G~~VGviAn~p~~ 337 (523)
T 1on3_A 285 DGKKGYDVRDVIAKIVDWGDYLEVKAG--------------Y-------------ATNLVTAFARVNGRSVGIVANQPSV 337 (523)
T ss_dssp STTCCCCTHHHHHHHSGGGCEEEESTT--------------S-------------STTEEEEEEEETTEEEEEEEECTTS
T ss_pred HCCCCCCHHHHEEECCCCCCEEEEECC--------------C-------------CCCHHHHHHHHCCCEEEEEECCCCC
T ss_conf 046785636720204556753114645--------------3-------------6618878776459558999247632
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 18535778999999999999862896899976888776---521246777788999999998629988998567642011
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM---QEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM---qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
.+|.+.....+|..|.++.|-..++|||.+.+.-|.-. +|-.--+-..++.. ..+..+..|.|+|++...+||-
T Consensus 338 ~~G~l~~~~a~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Gi~~~gA~~~---~A~a~a~vP~isvi~~k~~G~g 414 (523)
T 1on3_A 338 MSGCLDINASDKAAEFVNFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKML---YAYSEATVPKITVVLRKAYGGS 414 (523)
T ss_dssp GGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHH---HHHHHCCSCEEEEEEEEEEHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HHHHCCCCCEEEEEECCCCCHH
T ss_conf 3688870678999999998874287789994278767778999976999999999---9853679987999857744502
Q ss_pred EEEECC-----CCCEEEEECCCEEECCCHHHHHHHH-C-----CCCC------------CCCHHHHHHHHCCCCCEEECH
Q ss_conf 112014-----6852555314211023278878763-6-----7788------------720215999968983537358
Q gi|254780820|r 209 TASYAM-----LGDIHLAEPGAEIGFAGRRVIEQTV-R-----EKLP------------DGFQRSEYLVEHGMIDRIVHR 265 (284)
Q Consensus 209 ~AS~a~-----lgDiiiaep~a~igFaG~rVi~~t~-~-----~~lp------------~~fqtae~l~~~G~iD~iv~r 265 (284)
.+|| -.|+++|-|.|.++.-||.---.++ + .+-| +.+.++....++|.||.||++
T Consensus 415 --~~am~~~~~~~d~~~AwP~a~~~vm~pegaa~i~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~g~iD~VIdP 492 (523)
T 1on3_A 415 --YLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDP 492 (523)
T ss_dssp --HHTTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCG
T ss_pred --HHCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECH
T ss_conf --312467778878799867555984599999998741210176798999999999999875799999866788842887
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999972378
Q gi|254780820|r 266 HDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 266 ~~l~~~i~~ll~il~~~~ 283 (284)
.|.|+.|...|.++..|.
T Consensus 493 ~~TR~~l~~~l~~~~~k~ 510 (523)
T 1on3_A 493 ADTRRKIASALEMYATKR 510 (523)
T ss_dssp GGHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999999975177