HHsearch results for GI: 254780820 and protein with PDBid: 1on3_A

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=99.70  E-value=1.9e-15  Score=133.85  Aligned_cols=200  Identities=20%  Similarity=0.231  Sum_probs=155.1

Q ss_pred             CCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHH
Q ss_conf             89624379999998455654201334568702018676420356677666421667716999878704149999983303
Q gi|254780820|r   52 DFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSF  131 (284)
Q Consensus        52 ~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F  131 (284)
                      +.......|+-|..++|.++|.|+...              |             ..++|||.++|+|++|.+.+.|..+
T Consensus       285 ~~~~~yd~r~vi~~v~D~~~f~E~~~~--------------~-------------g~~~vtg~aRl~G~~VGviAn~p~~  337 (523)
T 1on3_A          285 DGKKGYDVRDVIAKIVDWGDYLEVKAG--------------Y-------------ATNLVTAFARVNGRSVGIVANQPSV  337 (523)
T ss_dssp             STTCCCCTHHHHHHHSGGGCEEEESTT--------------S-------------STTEEEEEEEETTEEEEEEEECTTS
T ss_pred             HCCCCCCHHHHEEECCCCCCEEEEECC--------------C-------------CCCHHHHHHHHCCCEEEEEECCCCC
T ss_conf             046785636720204556753114645--------------3-------------6618878776459558999247632


Q ss_pred             HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf             18535778999999999999862896899976888776---521246777788999999998629988998567642011
Q gi|254780820|r  132 IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM---QEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV  208 (284)
Q Consensus       132 ~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM---qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv  208 (284)
                      .+|.+.....+|..|.++.|-..++|||.+.+.-|.-.   +|-.--+-..++..   ..+..+..|.|+|++...+||-
T Consensus       338 ~~G~l~~~~a~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Gi~~~gA~~~---~A~a~a~vP~isvi~~k~~G~g  414 (523)
T 1on3_A          338 MSGCLDINASDKAAEFVNFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKML---YAYSEATVPKITVVLRKAYGGS  414 (523)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHH---HHHHHCCSCEEEEEEEEEEHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HHHHCCCCCEEEEEECCCCCHH
T ss_conf             3688870678999999998874287789994278767778999976999999999---9853679987999857744502


Q ss_pred             EEEECC-----CCCEEEEECCCEEECCCHHHHHHHH-C-----CCCC------------CCCHHHHHHHHCCCCCEEECH
Q ss_conf             112014-----6852555314211023278878763-6-----7788------------720215999968983537358
Q gi|254780820|r  209 TASYAM-----LGDIHLAEPGAEIGFAGRRVIEQTV-R-----EKLP------------DGFQRSEYLVEHGMIDRIVHR  265 (284)
Q Consensus       209 ~AS~a~-----lgDiiiaep~a~igFaG~rVi~~t~-~-----~~lp------------~~fqtae~l~~~G~iD~iv~r  265 (284)
                        .+||     -.|+++|-|.|.++.-||.---.++ +     .+-|            +.+.++....++|.||.||++
T Consensus       415 --~~am~~~~~~~d~~~AwP~a~~~vm~pegaa~i~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~g~iD~VIdP  492 (523)
T 1on3_A          415 --YLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDP  492 (523)
T ss_dssp             --HHTTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCG
T ss_pred             --HHCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECH
T ss_conf             --312467778878799867555984599999998741210176798999999999999875799999866788842887


Q ss_pred             HHHHHHHHHHHHHHHCCC
Q ss_conf             999999999999972378
Q gi|254780820|r  266 HDIPEVVSSLCKILTKSV  283 (284)
Q Consensus       266 ~~l~~~i~~ll~il~~~~  283 (284)
                      .|.|+.|...|.++..|.
T Consensus       493 ~~TR~~l~~~l~~~~~k~  510 (523)
T 1on3_A          493 ADTRRKIASALEMYATKR  510 (523)
T ss_dssp             GGHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHHHHHHHHCC
T ss_conf             999999999999975177