HHsearch results for GI: 254780820 and protein with PDBid: 1pix_A

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=99.64  E-value=1.7e-14  Score=126.80  Aligned_cols=203  Identities=16%  Similarity=0.246  Sum_probs=153.2

Q ss_pred             CCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEE
Q ss_conf             38899896243799999984556542013345687020186764203566776664216677169998787041499999
Q gi|254780820|r   47 VISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVV  126 (284)
Q Consensus        47 VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~  126 (284)
                      +.|. +.--....|+-|..++|+++|.|+-..              |             ..++|||.++|+|+||.+++
T Consensus       312 ~vp~-d~~~~yd~r~vi~~i~D~~~f~E~~~~--------------~-------------g~~iVtG~aRl~G~pVGVIA  363 (587)
T 1pix_A          312 MVPL-NDKRAYDIYNVIARLFDNSELHEYKKG--------------Y-------------GPEMVTGLAKVNGLLVGVVA  363 (587)
T ss_dssp             HSCS-STTSCCCHHHHHHTTSGGGBCEESSTT--------------S-------------STTEEEEEEEETTEEEEEEE
T ss_pred             CCCC-CCCCCCCCEECCCCCCCCHHHHCCCCC--------------C-------------CCCEEEEEEEECCCEEEEEE
T ss_conf             1444-555676630000002332011013566--------------7-------------88537899986796799995


Q ss_pred             EECHHH--------------CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHH
Q ss_conf             833031--------------8535778999999999999862896899976888776-----521246777788999999
Q gi|254780820|r  127 HEFSFI--------------GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAIN  187 (284)
Q Consensus       127 ~df~F~--------------GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~  187 (284)
                      .+..++              ||++.+...+|.+|.++.+-..++|||.|.+.-|.-.     +.|++-  .-+|.   +.
T Consensus       364 n~~~~~~~~~~~~a~~~~~~gG~l~~~sa~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Giir--~gA~l---~~  438 (587)
T 1pix_A          364 NVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLG--LGQSL---IY  438 (587)
T ss_dssp             ECCSEETTCCTTSCTTCCEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHH--HHHHH---HH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH--HHHHH---HH
T ss_conf             25543445543222333356896687899999999998764299668971588878876999988999--99999---98


Q ss_pred             HHHHCCCCEEEEECCCCCCEEEEEECCCC-----CE--EEEECCCEEECCCHHHHHHHH-----------CCCCC-----
Q ss_conf             99862998899856764201111201468-----52--555314211023278878763-----------67788-----
Q gi|254780820|r  188 MLKDAGLPYIVVLTNPTTGGVTASYAMLG-----DI--HLAEPGAEIGFAGRRVIEQTV-----------REKLP-----  244 (284)
Q Consensus       188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lg-----Di--iiaep~a~igFaG~rVi~~t~-----------~~~lp-----  244 (284)
                      .+.++.+|.|+|++...+||  |.++|.+     |+  ..+-|.+.|+.-||.-...+.           ++++.     
T Consensus       439 A~a~a~vP~itvi~rkayGg--a~~am~~~~~~~~~~~~~a~p~a~i~vm~~e~av~i~~~~~~~~~~~~~~~~~~~~~~  516 (587)
T 1pix_A          439 SIQTSHIPQFEITLRKGTAA--AHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDK  516 (587)
T ss_dssp             HHHTCCCCEEEEECSEEETT--HHHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred             HHHHCCCCEEEEEECCCCHH--HHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf             88737999799997985316--7787347656886137721887626157999999999888765221445244589999


Q ss_pred             -----CCC---HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf             -----720---2159999689835373589999999999999723789
Q gi|254780820|r  245 -----DGF---QRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSVQ  284 (284)
Q Consensus       245 -----~~f---qtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~~  284 (284)
                           +.|   .++...-++|.||.|+++.|.|..|...|..+.+|.+
T Consensus       517 ~~~~~~~~~~~~~p~~aa~~g~vD~iIdP~~TR~~l~~~l~~~~~~~~  564 (587)
T 1pix_A          517 MNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPE  564 (587)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSCS
T ss_pred             HHHHHHHHHHHCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999998736999999728868128839999999999999985866