HHsearch results for GI: 254780820 and protein with PDBid: 1pix_A
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=99.64 E-value=1.7e-14 Score=126.80 Aligned_cols=203 Identities=16% Similarity=0.246 Sum_probs=153.2
Q ss_pred CCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEE
Q ss_conf 38899896243799999984556542013345687020186764203566776664216677169998787041499999
Q gi|254780820|r 47 VISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVV 126 (284)
Q Consensus 47 VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~ 126 (284)
+.|. +.--....|+-|..++|+++|.|+-.. | ..++|||.++|+|+||.+++
T Consensus 312 ~vp~-d~~~~yd~r~vi~~i~D~~~f~E~~~~--------------~-------------g~~iVtG~aRl~G~pVGVIA 363 (587)
T 1pix_A 312 MVPL-NDKRAYDIYNVIARLFDNSELHEYKKG--------------Y-------------GPEMVTGLAKVNGLLVGVVA 363 (587)
T ss_dssp HSCS-STTSCCCHHHHHHTTSGGGBCEESSTT--------------S-------------STTEEEEEEEETTEEEEEEE
T ss_pred CCCC-CCCCCCCCEECCCCCCCCHHHHCCCCC--------------C-------------CCCEEEEEEEECCCEEEEEE
T ss_conf 1444-555676630000002332011013566--------------7-------------88537899986796799995
Q ss_pred EECHHH--------------CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHH
Q ss_conf 833031--------------8535778999999999999862896899976888776-----521246777788999999
Q gi|254780820|r 127 HEFSFI--------------GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAIN 187 (284)
Q Consensus 127 ~df~F~--------------GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~ 187 (284)
.+..++ ||++.+...+|.+|.++.+-..++|||.|.+.-|.-. +.|++- .-+|. +.
T Consensus 364 n~~~~~~~~~~~~a~~~~~~gG~l~~~sa~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Giir--~gA~l---~~ 438 (587)
T 1pix_A 364 NVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLG--LGQSL---IY 438 (587)
T ss_dssp ECCSEETTCCTTSCTTCCEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHH--HHHHH---HH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH--HHHHH---HH
T ss_conf 25543445543222333356896687899999999998764299668971588878876999988999--99999---98
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCC-----CE--EEEECCCEEECCCHHHHHHHH-----------CCCCC-----
Q ss_conf 99862998899856764201111201468-----52--555314211023278878763-----------67788-----
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLG-----DI--HLAEPGAEIGFAGRRVIEQTV-----------REKLP----- 244 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lg-----Di--iiaep~a~igFaG~rVi~~t~-----------~~~lp----- 244 (284)
.+.++.+|.|+|++...+|| |.++|.+ |+ ..+-|.+.|+.-||.-...+. ++++.
T Consensus 439 A~a~a~vP~itvi~rkayGg--a~~am~~~~~~~~~~~~~a~p~a~i~vm~~e~av~i~~~~~~~~~~~~~~~~~~~~~~ 516 (587)
T 1pix_A 439 SIQTSHIPQFEITLRKGTAA--AHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDK 516 (587)
T ss_dssp HHHTCCCCEEEEECSEEETT--HHHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHCCCCEEEEEECCCCHH--HHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 88737999799997985316--7787347656886137721887626157999999999888765221445244589999
Q ss_pred -----CCC---HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf -----720---2159999689835373589999999999999723789
Q gi|254780820|r 245 -----DGF---QRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSVQ 284 (284)
Q Consensus 245 -----~~f---qtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~~ 284 (284)
+.| .++...-++|.||.|+++.|.|..|...|..+.+|.+
T Consensus 517 ~~~~~~~~~~~~~p~~aa~~g~vD~iIdP~~TR~~l~~~l~~~~~~~~ 564 (587)
T 1pix_A 517 MNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPE 564 (587)
T ss_dssp HHHHHHHHHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999998736999999728868128839999999999999985866