HHsearch results for GI: 254780820 and protein with PDBid: 1q52_A
>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=97.01 E-value=0.03 Score=36.17 Aligned_cols=169 Identities=14% Similarity=0.164 Sum_probs=97.7
Q ss_pred EEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------------CCCCCCCHH---
Q ss_conf 99987870414999998330318535778999999999999862-89689997688------------877652124---
Q gi|254780820|r 111 VSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------------GARMQEGIL--- 174 (284)
Q Consensus 111 v~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------------GaRMqEG~~--- 174 (284)
++.+=.|++- |+...+|--=-.-+|....-+.+..+++.+.++ .+-+|++..++ |+.+.+-..
T Consensus 37 i~~~~~~ddg-Va~ItLNrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~~~~~~sgG~~FcaG~Dl~~~~~~~~ 115 (314)
T 1q52_A 37 ITYHRHVDDA-TVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGY 115 (314)
T ss_dssp EEEEEESSSS-EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC----------
T ss_pred EEEEEEEECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC
T ss_conf 6999973399-899995587756898999999999999999749997589995788766552102334767566531244
Q ss_pred ---H-----HHHHHH-----HHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCC-EEECC----------
Q ss_conf ---6-----777788-----99999999862998899856764201111201468525553142-11023----------
Q gi|254780820|r 175 ---S-----LMQLPR-----TTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGA-EIGFA---------- 230 (284)
Q Consensus 175 ---s-----L~qMak-----t~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a-~igFa---------- 230 (284)
+ .....+ .......+..-..|+|+.+-+++.||-. ..+...|++|+.+.+ .+++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~-~lalacD~~ias~~a~~f~~pe~~lGl~p~~ 194 (314)
T 1q52_A 116 QYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGH-SLHVVCDLTLASREYARFKQTDADVGSFDGG 194 (314)
T ss_dssp -------------------CHHHHHHHHHHSSSEEEEEECSEEETHHH-HHHHHSSEEEEETTTCEEECCGGGGTCCCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHH-HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 433334201266788888999999999985899889998376610213-8876123112100377766444045878885
Q ss_pred -C-HHHHHHHHCCC------CCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf -2-78878763677------8872021599996898353735899999999999997237
Q gi|254780820|r 231 -G-RRVIEQTVREK------LPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 231 -G-~rVi~~t~~~~------lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
| .+.. ..+|.. +--.--+|+..++.|+||.||+..++.+....+..-+.++
T Consensus 195 g~~~~L~-~~vG~~~A~~llltg~~i~a~eA~~~Glv~~vv~~~el~~~a~~~a~~i~~~ 253 (314)
T 1q52_A 195 YGSAYLA-RQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK 253 (314)
T ss_dssp TTTHHHH-HHHCHHHHHHHHHHCCEECHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CHHHHHH-HHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 0699999-9856999999998589888889730783279638789999999999999808