HHsearch results for GI: 254780820 and protein with PDBid: 1vrg_A
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Thermotoga maritima MSB8} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=2.6e-41 Score=325.10 Aligned_cols=212 Identities=23% Similarity=0.328 Sum_probs=182.2
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
||+|||||++|+|+|||.|++......+... ...+.....|+||+|+|+|||++|+++++||+|+|||
T Consensus 46 kltaRERi~~LlD~gSF~E~g~l~~~~~~~~------------~~~~~~~~~dgvV~G~G~I~Gr~v~v~a~D~tv~gGS 113 (527)
T 1vrg_A 46 KLTAWERLELLLDPGTFVEIDKFVEHRNTYF------------GLDKVKLPRDGVITGVGEINGRKVAVFSQDFTVMGGS 113 (527)
T ss_dssp CCCHHHHHHHHSCTTCCEEECTTCCCCCCGG------------GGGGCCCGGGGEEEEEEEETTEEEEEEEECTTTGGGC
T ss_pred CCCHHHHHHHHCCCCCCEECCCCCCCCCCCC------------CCCCCCCCCCEEEEEEEEECCEEEEEEEECCCEECCC
T ss_conf 9999999999657998747754315477554------------5334558887189999999999999999878770407
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
+|.++++|+.++.++|.++++|+|.+.+|||+|||||+.+|+||.++..+...+ ..++|+|+++++||+||.++++++.
T Consensus 114 ~g~~~~~k~~~~~~~A~~~~lPlV~l~~sgGar~~eg~~~l~~~g~i~~~~~~~-sg~vP~Isvv~Gp~~GG~A~~~~~~ 192 (527)
T 1vrg_A 114 LGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLA-SGVVPQITVIAGPCAGGAVYSPALT 192 (527)
T ss_dssp BCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHH-TTTSCEEEEEEEEEBGGGGHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHC
T ss_conf 788999999999999996599889985578877655542124406999999996-6999889994178760787778868
Q ss_pred CCEEEEECCCEEECCCHHHHHHHHCCCCCCCC-HHHHHHH-HCCCCCEEEC-HHHHHHHHHHHHHHHH
Q ss_conf 85255531421102327887876367788720-2159999-6898353735-8999999999999972
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRRVIEQTVREKLPDGF-QRSEYLV-EHGMIDRIVH-RHDIPEVVSSLCKILT 280 (284)
Q Consensus 216 gDiiiaep~a~igFaG~rVi~~t~~~~lp~~f-qtae~l~-~~G~iD~iv~-r~~l~~~i~~ll~il~ 280 (284)
+++|+++++|+|+|+||+||++.++|+++++. ..++.+. ..|.+|.+++ ..+.-+.+-++|+.|-
T Consensus 193 d~vim~~~~a~i~~aGP~vV~~~tGe~v~~eelGG~~~h~~~sG~~~~~~~~e~~a~~~~r~~ls~lp 260 (527)
T 1vrg_A 193 DFIVMVDQTARMFITGPNVIKAVTGEEISQEDLGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLP 260 (527)
T ss_dssp SEEEEETTTCBCBSSCHHHHHHHHCCCCCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHTTSC
T ss_pred CEEEEECCCCEEEECCHHHHHHHCCCCCCHHHCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHCC
T ss_conf 85899617745871477889886076258565576047642255530542114779999999998578