HHsearch results for GI: 254780820 and protein with PDBid: 1x0u_A

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase alpha subunit; lyase; 2.20A {Sulfolobus tokodaii str}
Probab=100.00  E-value=1e-40  Score=320.68  Aligned_cols=213  Identities=25%  Similarity=0.388  Sum_probs=184.2

Q ss_pred             ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf             43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r   56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS  135 (284)
Q Consensus        56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS  135 (284)
                      ||+|||||++|||+|||.|++.         |.+.+.|.+++   .+++...|+||+|.|+|+|++|+++++||+|+|||
T Consensus        39 kltaRERi~~LlD~gSF~E~~~---------~~~~~~~~~~~---~~~~~~~dgvv~G~G~I~Gr~v~v~a~D~tv~gGS  106 (522)
T 1x0u_A           39 KLTARERLALLFDDGKFNEIMT---------FATTRATEFGL---DKQRFYGDGVVTGWGKVDGRTVFAYAQDFTVLGGS  106 (522)
T ss_dssp             CCCHHHHHHHHSSSSCCEESSS---------SCCCCCCGGGT---TTCCCTTTTEEEEEEEETTEEEEEEEECTTTGGGC
T ss_pred             CCCHHHHHHHHCCCCCCEECHH---------HHCCCCCCCCC---CCCCCCCCEEEEEEEEECCEEEEEEEECCCEECCC
T ss_conf             9999999999658997558352---------21646553354---34568898599999999999999999878550427


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf             57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r  136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML  215 (284)
Q Consensus       136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l  215 (284)
                      +|.++++|+.++.|+|.++++|+|.+.+|||+|||||+.||++++++... ..+...++|+|+++++||+||.++++++.
T Consensus       107 ~g~~~~~K~~~a~e~A~~~~lPlV~l~~SgGar~~eg~~~l~~~~~~~~~-~~~~s~~iP~Isvv~G~~~gG~a~~~~~~  185 (522)
T 1x0u_A          107 LGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKM-NVMASGVIPQITIMAGPAAGGAVYSPALT  185 (522)
T ss_dssp             BCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHH-HHHHTTTSCEEEEECSEEEGGGGHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCCCEEEEECCCCCCCHHHHHHHC
T ss_conf             78778578679999998559998999678887777652002342178999-99975899779981478871052326646


Q ss_pred             CCEEEEECCC-EEECCCHHHHHHHHCCCCC-CCCHHHHHH-HHCCCCCEEEC-HHHHHHHHHHHHHHHHC
Q ss_conf             8525553142-1102327887876367788-720215999-96898353735-89999999999999723
Q gi|254780820|r  216 GDIHLAEPGA-EIGFAGRRVIEQTVREKLP-DGFQRSEYL-VEHGMIDRIVH-RHDIPEVVSSLCKILTK  281 (284)
Q Consensus       216 gDiiiaep~a-~igFaG~rVi~~t~~~~lp-~~fqtae~l-~~~G~iD~iv~-r~~l~~~i~~ll~il~~  281 (284)
                      +++++.|+.+ .++++||||+++.++|+++ ++...++.+ ..+|.+|.+++ ..+.-+.+-++|+.|-.
T Consensus       186 d~vim~~~~~~~~flaGP~vv~~~~ge~~~~~elGga~~h~~~sG~~d~v~~de~~a~~~~r~~ls~lp~  255 (522)
T 1x0u_A          186 DFIIMIKGDAYYMFVTGPEITKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPS  255 (522)
T ss_dssp             SEEEEECSTTCEEESSCHHHHHHTTCCCCCHHHHHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSCS
T ss_pred             CCEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             7212204762378741641013202554461013443354421686410045368999999999974887