HHsearch results for GI: 254780820 and protein with PDBid: 3gf3_A
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=100.00 E-value=1.7e-35 Score=281.97 Aligned_cols=205 Identities=16% Similarity=0.210 Sum_probs=171.6
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
+|+|||||+.|+|+|||.|++......+ +++ -.|+||+|+|+|+|++|+++++||+|+|||
T Consensus 61 kltaRERI~~LlD~gSF~E~~~l~~~~~------------------~~~-~~~gvV~G~G~I~Gr~V~V~a~D~tv~gGS 121 (588)
T 3gf3_A 61 QLSAMQRINALIDPGTWCPLNSLFNPEN------------------NKF-GTTNIVNGLGRVDGKWVYIVASDNKKMAGA 121 (588)
T ss_dssp CCCHHHHHHHHSCTTCCEEESTTCCTTC------------------CTT-SSCSEEEEEEEETTEEEEEEEECTTSGGGC
T ss_pred CCCHHHHHHHHCCCCCCCCCHHHHHCCC------------------CCC-CCCCEEEEEEEECCEEEEEEEECCCCCCCC
T ss_conf 9999999999658997501266672046------------------888-998689999999999999999978211569
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH---HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
Q ss_conf 577899999999999986289689997688877652124677778---89999999986299889985676420111120
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLP---RTTIAINMLKDAGLPYIVVLTNPTTGGVTASY 212 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMa---kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~ 212 (284)
+|.++++|+.|+.++|.+.++|+|.+.+|||+||||+...+.+|. ++..+..+++..++|+|+++.+||+||.+++
T Consensus 122 ~g~~~~~K~~r~~e~A~~~~lP~V~l~dsgGaRl~e~~~~~~~~~~~g~~~~~~~~~s~~~iP~Isvv~G~~~gG~a~~- 200 (588)
T 3gf3_A 122 WVPGQAENLIRCSDAAKMMHLPLIYLLNCSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYH- 200 (588)
T ss_dssp BCTTHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHH-
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE-
T ss_conf 7878989999999999985989799944787666654223530444438999999985699977999457766665301-
Q ss_pred CCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCH--------------------HHHHHH-HCCCCCEEEC-HHHHHH
Q ss_conf 146852555314211023278878763677887202--------------------159999-6898353735-899999
Q gi|254780820|r 213 AMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQ--------------------RSEYLV-EHGMIDRIVH-RHDIPE 270 (284)
Q Consensus 213 a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~fq--------------------tae~l~-~~G~iD~iv~-r~~l~~ 270 (284)
++.+|++|++++++|+|+||+||+..+++...+++. .++.+. ++|.+|.+++ ..+--+
T Consensus 201 a~s~~~ii~~~~a~i~l~GP~vv~~~~g~~~~~~~~g~~~~~~~~~~e~l~~~~lgga~~h~~~sGv~d~va~de~~a~~ 280 (588)
T 3gf3_A 201 SISPTILIAHQDANMAVGGAGILSGMNPKGYIDDEAAEQIIAAQIENSKLKVPAPGSVPIHYDETGFFREVYQNDLGVID 280 (588)
T ss_dssp HHSSSEEEEETTCEEESSCCC---------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTSCCSCEEESSHHHHHH
T ss_pred ECCCCCCEEECCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 20465323524347997282353035774334311245554300222210234577435442024654102478799999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999972
Q gi|254780820|r 271 VVSSLCKILT 280 (284)
Q Consensus 271 ~i~~ll~il~ 280 (284)
.+.++|+.|-
T Consensus 281 ~~r~~ls~lp 290 (588)
T 3gf3_A 281 GIKKYISYLP 290 (588)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHHCC
T ss_conf 8888984488