RPSBLAST alignment for GI: 254780820 and conserved domain: TIGR01117

>gnl|CDD|130187 TIGR01117, mmdA, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. Length = 512

 Score = 56.8 bits (137), Expect = 6e-09
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 23/193 (11%)

Query: 56  KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVG 115
           K+ A+ERL  LFD   +  +D   V      F  +KK +             + +V+  G
Sbjct: 30  KMTARERLALLFDPGSFVEID-QFVKHRCTNFGMDKKELPA-----------EGVVTGYG 77

Query: 116 NVRDFKLVAV-VHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGIL 174
            + D +LV     +F+ +GGS+G      IVK  + A+    P+V    SGGAR+QE + 
Sbjct: 78  TI-DGRLVYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMGAPVVGLNDSGGARIQEAVD 136

Query: 175 SLMQ----LPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA 230
           +L        R TIA  +     +P I  +  P  GG   S A+   I++ +  +++   
Sbjct: 137 ALKGYGDIFYRNTIASGV-----VPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT 191

Query: 231 GRRVIEQTVREKL 243
           G +VI+    E++
Sbjct: 192 GPQVIKTVTGEEV 204