HHsearch alignment for GI: 254780821 and conserved domain: COG0769

>COG0769 MurE UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=0  Score=314.73  Aligned_cols=353  Identities=21%  Similarity=0.226  Sum_probs=239.2

Q ss_pred             CCHHHHHHHHHHC-CCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCH
Q ss_conf             8889999999872-995883598399945898479999999999997893514137841101200898884778715588
Q gi|254780821|r    4 DSLLKMGYLLEDL-GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVED   82 (429)
Q Consensus         4 ~~l~r~~~ll~~l-g~P~~~~~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~   82 (429)
T Consensus        71 ~~~~~~~~~a~~~y~~ps~~l-~vigvTGTNgKTt~t~~~~~~~~~~g~~~~~~gT-----------------~g~~~~~  132 (475)
T COG0769          71 GTNGKLTTLALAFYGLPSGKL-KVIGVTGTNGKTTTTSLLAQILKKLGKKTALIGT-----------------EGDELSP  132 (475)
T ss_pred             CCHHHHHHHHHHHCCCCCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE-----------------EEEECCC
T ss_conf             853777888998523865785-1898638785799999999998862982589997-----------------7663268


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH----HHHHHHCCCCCCCEEEEEECCCHHCCCC
Q ss_conf             999999999863047767795789999999874114462477764447----5676413567751589860250000002
Q gi|254780821|r   83 VELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLG----GSLDATNIIEKVAVSVITSISLDHEKIL  158 (429)
Q Consensus        83 ~~~~~~~~~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~GlG----Gr~DaTnvi~~~~vavITnI~~DHle~L  158 (429)
T Consensus       133 ~~-------~~-~~~~tTP~~~~l~~--~~~~~~d~~~e~~vmEvssh~l~~~Rv~~~----~f~v~~ftnls~DHlD~h  198 (475)
T COG0769         133 GI-------LE-PTGLTTPEALDLQN--LLRDLLDRGAEIAVMEVSSHGLVQGRVEGV----TFDVGVFTNLSRDHLDYH  198 (475)
T ss_pred             CC-------CC-CCCCCCCCHHHHHH--HHHHHHHCCCEEEEEEECHHHHHHCCCCCC----EEEEECCCCCCHHHHHCC
T ss_conf             86-------34-56678921789999--999999738809998850347975786563----598864566566665235


Q ss_pred             CCCHHHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC----------CCEEEEEEC
Q ss_conf             7852344566653113---798331544471789889999862105665235763210125----------852444310
Q gi|254780821|r  159 GNTVSAIAKDKSGIIK---PGCPVVIGHQVYDEVREILVSKAEKMGCPYNVYGDDFYAFEK----------NKCLVYQDK  225 (429)
Q Consensus       159 G~tle~Ia~eKa~I~k---~~~~~v~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  225 (429)
T Consensus       199 -~t~e~Y~~aK~~lf~~~~~~~~~Vin~dd~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~-  274 (475)
T COG0769         199 -GTMEYYGAAKAVLFESLPHSGEAVINPDDGHGL-D-YKERLKNALGDYITYGCDFKRPDLDYRGIEESSSGSDFVFEP-  274 (475)
T ss_pred             -CCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHH-H-HHHHHHHCCCCEEEECCCCCCCCHHHCCCEEEECCCEEEEEC-
T ss_conf             -749999988987764057887479877880388-8-999998568878996889963121222611421354058863-


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCEEEEECCCCHH
Q ss_conf             33334444443222211111469999875320000110011222233-66530354228754445787459993363215
Q gi|254780821|r  226 ISQTNLTVLGLVGEHQYINAATAICAVQMAGFTLEKECINAALQSVQ-WFGRLQKITEGPLLNKLPDHSEVWIDGGHNPN  304 (429)
Q Consensus       226 ~~~~~~~~l~l~G~hn~~Na~~Aiaa~~~lg~~i~~~~I~~gL~~~~-~pGR~e~i~~~~~~~~~~~~~~viiD~AHNp~  304 (429)
T Consensus       275 ~~~~~~~~~~L~G~fNv~NaLaA~a~~~~lG~--~~e~i~~~l~~~~~v~GRmE~v~~~--------~~~v~VDyAHnPd  344 (475)
T COG0769         275 SGGIGEYELPLPGLFNVYNALAAVAAALALGV--DLEDILAGLETLKPVPGRMELVNIG--------GKLVIVDYAHNPD  344 (475)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHCCCCCCCEEEECCC--------CCEEEEEECCCHH
T ss_conf             78732686041227789999999999987499--9999999997468999860687389--------9769999534869


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH---HHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC-C
Q ss_conf             799888654331147777124311346798989---999988863888999842288998421278989999999854-9
Q gi|254780821|r  305 AGLVVSKEISKLKGSSNKPFYLVIGMVEGKKYG---RYLEAFVELSPIVLSVSLICRGRERQSISITPKVLMQEAKKL-G  380 (429)
Q Consensus       305 s~~~l~~~l~~l~~~~~~~i~~I~G~~~dKd~~---~~l~~l~~~~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~  380 (429)
T Consensus       345 ~le~~L~~~~~~---~~g~li~VfG~gGDrD~~kr~~mg~ia~~~ad~vivt~dnpR-------~edp~~i~~~i~~g~~  414 (475)
T COG0769         345 GLEKALRAVRLH---AAGRLIVVFGCGGDRDKSKRPDMGAIAEQLADIVIVTSDNPR-------SEDPAVILADILAGIE  414 (475)
T ss_pred             HHHHHHHHHHHH---CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCC-------CCCHHHHHHHHHHCCC
T ss_conf             999999998753---498489997766887534303159999855993699189988-------7688999999983647


Q ss_pred             C--CEEEECCHHHHHHHHHHHCCCCCCCEEEEECCH
Q ss_conf             9--789969989999999986035886799994977
Q gi|254780821|r  381 F--QAMACSSMIEALSRVRKINEELPPPLILIAGSL  414 (429)
Q Consensus       381 ~--~~~~~~~~~eAi~~a~~~~~~~~~d~VLV~GS~  414 (429)
T Consensus       415 ~~~~~~~~~dr~~AI~~ai~~a~--~~D~vliagkG  448 (475)
T COG0769         415 APEKYEIIEDREEAIRKALDLAK--EGDVVLIAGKG  448 (475)
T ss_pred             CCCCEEECHHHHHHHHHHHHHHC--CCCEEEEEEEC
T ss_conf             66414301109999999998632--48878996423