HHsearch alignment for GI: 254780821 and conserved domain: COG0769
>COG0769 MurE UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=314.73 Aligned_cols=353 Identities=21% Similarity=0.226 Sum_probs=239.2
Q ss_pred CCHHHHHHHHHHC-CCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCH
Q ss_conf 8889999999872-995883598399945898479999999999997893514137841101200898884778715588
Q gi|254780821|r 4 DSLLKMGYLLEDL-GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVED 82 (429)
Q Consensus 4 ~~l~r~~~ll~~l-g~P~~~~~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~ 82 (429)
T Consensus 71 ~~~~~~~~~a~~~y~~ps~~l-~vigvTGTNgKTt~t~~~~~~~~~~g~~~~~~gT-----------------~g~~~~~ 132 (475)
T COG0769 71 GTNGKLTTLALAFYGLPSGKL-KVIGVTGTNGKTTTTSLLAQILKKLGKKTALIGT-----------------EGDELSP 132 (475)
T ss_pred CCHHHHHHHHHHHCCCCCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE-----------------EEEECCC
T ss_conf 853777888998523865785-1898638785799999999998862982589997-----------------7663268
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH----HHHHHHCCCCCCCEEEEEECCCHHCCCC
Q ss_conf 999999999863047767795789999999874114462477764447----5676413567751589860250000002
Q gi|254780821|r 83 VELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLG----GSLDATNIIEKVAVSVITSISLDHEKIL 158 (429)
Q Consensus 83 ~~~~~~~~~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~GlG----Gr~DaTnvi~~~~vavITnI~~DHle~L 158 (429)
T Consensus 133 ~~-------~~-~~~~tTP~~~~l~~--~~~~~~d~~~e~~vmEvssh~l~~~Rv~~~----~f~v~~ftnls~DHlD~h 198 (475)
T COG0769 133 GI-------LE-PTGLTTPEALDLQN--LLRDLLDRGAEIAVMEVSSHGLVQGRVEGV----TFDVGVFTNLSRDHLDYH 198 (475)
T ss_pred CC-------CC-CCCCCCCCHHHHHH--HHHHHHHCCCEEEEEEECHHHHHHCCCCCC----EEEEECCCCCCHHHHHCC
T ss_conf 86-------34-56678921789999--999999738809998850347975786563----598864566566665235
Q ss_pred CCCHHHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC----------CCEEEEEEC
Q ss_conf 7852344566653113---798331544471789889999862105665235763210125----------852444310
Q gi|254780821|r 159 GNTVSAIAKDKSGIIK---PGCPVVIGHQVYDEVREILVSKAEKMGCPYNVYGDDFYAFEK----------NKCLVYQDK 225 (429)
Q Consensus 159 G~tle~Ia~eKa~I~k---~~~~~v~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 225 (429)
T Consensus 199 -~t~e~Y~~aK~~lf~~~~~~~~~Vin~dd~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~- 274 (475)
T COG0769 199 -GTMEYYGAAKAVLFESLPHSGEAVINPDDGHGL-D-YKERLKNALGDYITYGCDFKRPDLDYRGIEESSSGSDFVFEP- 274 (475)
T ss_pred -CCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHH-H-HHHHHHHCCCCEEEECCCCCCCCHHHCCCEEEECCCEEEEEC-
T ss_conf -749999988987764057887479877880388-8-999998568878996889963121222611421354058863-
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCEEEEECCCCHH
Q ss_conf 33334444443222211111469999875320000110011222233-66530354228754445787459993363215
Q gi|254780821|r 226 ISQTNLTVLGLVGEHQYINAATAICAVQMAGFTLEKECINAALQSVQ-WFGRLQKITEGPLLNKLPDHSEVWIDGGHNPN 304 (429)
Q Consensus 226 ~~~~~~~~l~l~G~hn~~Na~~Aiaa~~~lg~~i~~~~I~~gL~~~~-~pGR~e~i~~~~~~~~~~~~~~viiD~AHNp~ 304 (429)
T Consensus 275 ~~~~~~~~~~L~G~fNv~NaLaA~a~~~~lG~--~~e~i~~~l~~~~~v~GRmE~v~~~--------~~~v~VDyAHnPd 344 (475)
T COG0769 275 SGGIGEYELPLPGLFNVYNALAAVAAALALGV--DLEDILAGLETLKPVPGRMELVNIG--------GKLVIVDYAHNPD 344 (475)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHCCCCCCCEEEECCC--------CCEEEEEECCCHH
T ss_conf 78732686041227789999999999987499--9999999997468999860687389--------9769999534869
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH---HHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC-C
Q ss_conf 799888654331147777124311346798989---999988863888999842288998421278989999999854-9
Q gi|254780821|r 305 AGLVVSKEISKLKGSSNKPFYLVIGMVEGKKYG---RYLEAFVELSPIVLSVSLICRGRERQSISITPKVLMQEAKKL-G 380 (429)
Q Consensus 305 s~~~l~~~l~~l~~~~~~~i~~I~G~~~dKd~~---~~l~~l~~~~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 380 (429)
T Consensus 345 ~le~~L~~~~~~---~~g~li~VfG~gGDrD~~kr~~mg~ia~~~ad~vivt~dnpR-------~edp~~i~~~i~~g~~ 414 (475)
T COG0769 345 GLEKALRAVRLH---AAGRLIVVFGCGGDRDKSKRPDMGAIAEQLADIVIVTSDNPR-------SEDPAVILADILAGIE 414 (475)
T ss_pred HHHHHHHHHHHH---CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCC-------CCCHHHHHHHHHHCCC
T ss_conf 999999998753---498489997766887534303159999855993699189988-------7688999999983647
Q ss_pred C--CEEEECCHHHHHHHHHHHCCCCCCCEEEEECCH
Q ss_conf 9--789969989999999986035886799994977
Q gi|254780821|r 381 F--QAMACSSMIEALSRVRKINEELPPPLILIAGSL 414 (429)
Q Consensus 381 ~--~~~~~~~~~eAi~~a~~~~~~~~~d~VLV~GS~ 414 (429)
T Consensus 415 ~~~~~~~~~dr~~AI~~ai~~a~--~~D~vliagkG 448 (475)
T COG0769 415 APEKYEIIEDREEAIRKALDLAK--EGDVVLIAGKG 448 (475)
T ss_pred CCCCEEECHHHHHHHHHHHHHHC--CCCEEEEEEEC
T ss_conf 66414301109999999998632--48878996423