HHsearch alignment for GI: 254780821 and conserved domain: COG0770

>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=2.2e-39  Score=262.44  Aligned_cols=331  Identities=23%  Similarity=0.278  Sum_probs=211.4

Q ss_pred             CCCHHHHHHHHHHC-CCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECC
Q ss_conf             78889999999872-99588359839994589847999999999999789351413784110120089888477871558
Q gi|254780821|r    3 ADSLLKMGYLLEDL-GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVE   81 (429)
Q Consensus         3 ~~~l~r~~~ll~~l-g~P~~~~~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~   81 (429)
T Consensus        84 ~d~~~al~~la~~~~~~~--~~-kvIaITGS~GKTTTKe~la~iL~~~~~-v--~~t~gn~--------N-----n~-i-  142 (451)
T COG0770          84 LDTLEALGKLAKAYRQKF--NA-KVIAITGSNGKTTTKEMLAAILSTKGK-V--HATPGNF--------N-----NE-I-  142 (451)
T ss_pred             HHHHHHHHHHHHHHHHHC--CC-CEEEEECCCCCHHHHHHHHHHHHHCCE-E--ECCCCCC--------C-----CC-C-
T ss_conf             999999999999999736--99-689995899707699999999863680-7--4678766--------8-----65-4-


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH--HHHHHHCCCCCCCEEEEEECCCHHCCCCC
Q ss_conf             8999999999863047767795789999999874114462477764447--56764135677515898602500000027
Q gi|254780821|r   82 DVELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLG--GSLDATNIIEKVAVSVITSISLDHEKILG  159 (429)
Q Consensus        82 ~~~~~~~~~~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~GlG--Gr~DaTnvi~~~~vavITnI~~DHle~LG  159 (429)
T Consensus       143 ----------------GlPltl------l----~~~~~~e~~VlEmG~~~~GeI~~l~~i~~P~iavItnIg~aHle~fg  196 (451)
T COG0770         143 ----------------GLPLTL------L----RLPADTEYAVLEMGMNHPGEIAELSEIARPDIAVITNIGEAHLEGFG  196 (451)
T ss_pred             ----------------CCHHHH------H----HCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHCC
T ss_conf             ----------------415689------7----47776647999868997774788844058988998380599987428


Q ss_pred             CCHHHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC----CCCC-----CCCCCEEEEEECCC
Q ss_conf             85234456665311---379833154447178988999986210566523576----3210-----12585244431033
Q gi|254780821|r  160 NTVSAIAKDKSGII---KPGCPVVIGHQVYDEVREILVSKAEKMGCPYNVYGD----DFYA-----FEKNKCLVYQDKIS  227 (429)
Q Consensus       160 ~tle~Ia~eKa~I~---k~~~~~v~~~~~~~~~~~~i~~~a~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~  227 (429)
T Consensus       197 -s~e~Ia~aK~Ei~~~~~~~g~ai~n~d-~~~~~~~~---~~~~~~~v~~fg~~~~~d~~~~~i~~~~~~~~f~~~~~~~  271 (451)
T COG0770         197 -SREGIAEAKAEILAGLRPEGIAILNAD-NPLLKNWA---AKIGNAKVLSFGLNNGGDFRATNIHLDEEGSSFTLDIEGG  271 (451)
T ss_pred             -CHHHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHH---HHCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf             -899999999999815687867998786-17778777---6357875799768877752567789838850799980683


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCEEEEECCC--CHH
Q ss_conf             334444443222211111469999875320000110011222233-66530354228754445787459993363--215
Q gi|254780821|r  228 QTNLTVLGLVGEHQYINAATAICAVQMAGFTLEKECINAALQSVQ-WFGRLQKITEGPLLNKLPDHSEVWIDGGH--NPN  304 (429)
Q Consensus       228 ~~~~~~l~l~G~hn~~Na~~Aiaa~~~lg~~i~~~~I~~gL~~~~-~pGR~e~i~~~~~~~~~~~~~~viiD~AH--Np~  304 (429)
T Consensus       272 ~-~~~~l~~~G~hn~~NalaA~a~a~~lG~~--~e~i~~~L~~~~~~~gR~~~~~~-------~~g~~-iIdD~YNAnp~  340 (451)
T COG0770         272 E-AEFELPLPGRHNVTNALAAAALALELGLD--LEEIAAGLKELKPVKGRLEVILL-------ANGKT-LIDDSYNANPD  340 (451)
T ss_pred             E-EEEEECCCCHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHCCCCCCCCEEEEC-------CCCCE-EEECCCCCCHH
T ss_conf             3-79994578476899999999999981999--99999999863788866336764-------89818-99737889989


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCC--C----CHHHHHHHHHHH-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             79988865433114777712431134679--8----989999988863-8889998422889984212789899999998
Q gi|254780821|r  305 AGLVVSKEISKLKGSSNKPFYLVIGMVEG--K----KYGRYLEAFVEL-SPIVLSVSLICRGRERQSISITPKVLMQEAK  377 (429)
Q Consensus       305 s~~~l~~~l~~l~~~~~~~i~~I~G~~~d--K----d~~~~l~~l~~~-~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~  377 (429)
T Consensus       341 sm~aai~~l~~~~~~---~~i~VlGdM~ELG~~s~~~H~~v~~~~~~~~~d~v~~~G------------~~~~~i~~~~-  404 (451)
T COG0770         341 SMRAALDLLAALPGR---KGIAVLGDMLELGEESEELHEEVGEYAVEAGIDLVFLVG------------ELSKAIAEAL-  404 (451)
T ss_pred             HHHHHHHHHHHCCCC---CCEEEECCHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEC------------CCHHHHHHHC-
T ss_conf             999999999637668---857994776663854899999999999856950999976------------2069999865-


Q ss_pred             HCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCHHH
Q ss_conf             549978996998999999998603588679999497799
Q gi|254780821|r  378 KLGFQAMACSSMIEALSRVRKINEELPPPLILIAGSLYL  416 (429)
Q Consensus       378 ~~~~~~~~~~~~~eAi~~a~~~~~~~~~d~VLV~GS~yl  416 (429)
T Consensus       405 --~~~~~~f~~~~~l~~~l~~~--l~~gd~vLvKgSr~~  439 (451)
T COG0770         405 --GNKGIYFADKEELITSLKAL--LRKGDVVLVKGSRGM  439 (451)
T ss_pred             --CCCEEECCCHHHHHHHHHHH--CCCCCEEEEECCCCC
T ss_conf             --77758607779999999985--677878999737646