HHsearch alignment for GI: 254780821 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=96.97 E-value=0.0012 Score=41.71 Aligned_cols=51 Identities=22% Similarity=0.324 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHCC----------CHHHHCCCEEEEE---CCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 88899999998729----------9588359839994---5898479999999999997893514
Q gi|254780821|r 4 DSLLKMGYLLEDLG----------RPQDRLPPVIHIG---GTNGKGSVASFSQRLLETSGLSVHV 55 (429)
Q Consensus 4 ~~l~r~~~ll~~lg----------~P~~~~~~vI~Vt---GTnGKttt~~~i~~il~~~g~k~g~ 55 (429)
T Consensus 75 ~ei~~lR~~l~~~~~~~~~~~p~R~~g~~~-~VIav~N~KGGVGKTTtav~LA~~LA~~G~RVLv 138 (387)
T TIGR03453 75 EQINELRRHLAQRPREALRYLPHRRGGEHL-QVIAVTNFKGGSGKTTTSAHLAQYLALRGYRVLA 138 (387)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 999999999986244555458999999988-0899978887656999999999999977998899