HHsearch alignment for GI: 254780821 and conserved domain: pfam02606
>pfam02606 LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyses the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <= ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N terminus.
Probab=90.77 E-value=1 Score=23.55 Aligned_cols=50 Identities=32% Similarity=0.341 Sum_probs=35.4
Q ss_pred HHHHHHHHHCCC-HHHHCC-CEEE----EECCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 999999987299-588359-8399----9458984799999999999978935141
Q gi|254780821|r 7 LKMGYLLEDLGR-PQDRLP-PVIH----IGGTNGKGSVASFSQRLLETSGLSVHVH 56 (429)
Q Consensus 7 ~r~~~ll~~lg~-P~~~~~-~vI~----VtGTnGKttt~~~i~~il~~~g~k~g~~ 56 (429)
T Consensus 16 ~~lR~~ly~~~~~k~~~~~vpVI~VGNit~GGtGKTP~v~~l~~~l~~~g~~~~il 71 (318)
T pfam02606 16 AALRRALYRRGILKSYRLPVPVIVVGNITVGGTGKTPLVIALAELLRARGLRPGVL 71 (318)
T ss_pred HHHHHHHHHCCCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999998605556344899999998984588785899999999999769944783