HHsearch results for GI: 254780821 and protein with PDBid: 2f00_A
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=100.00 E-value=1.4e-45 Score=301.28 Aligned_cols=340 Identities=18% Similarity=0.167 Sum_probs=223.7
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 98399945898479999999999997893514137841101200898884778715588999999999863047767795
Q gi|254780821|r 24 PPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVEDVELLDVFRRVRRVKSAQNLTI 103 (429)
Q Consensus 24 ~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~~~~~~~~~~i~~~~~~~~~t~ 103 (429)
+++|+||||||||||+.|++++|+++|++++.+. |+. +.+.. . .
T Consensus 119 ~~~iaVTGTnGKTTtt~ml~~iL~~~g~~~~~~~-------------g~~---~~~~~-------------~--~----- 162 (491)
T 2f00_A 119 RHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVN-------------GGL---VKAAG-------------V--H----- 162 (491)
T ss_dssp SEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEE-------------EEE---ETTTT-------------E--E-----
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEE-------------CCC---CCCHH-------------H--H-----
T ss_conf 7279994567823299999999997599937997-------------164---45024-------------4--2-----
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCHHHHHHHHHHHCC---CCCCCC
Q ss_conf 78999999987411446247776444756764135677515898602500000027852344566653113---798331
Q gi|254780821|r 104 FELSIATALVLFSKYPADCAIIEVGLGGSLDATNIIEKVAVSVITSISLDHEKILGNTVSAIAKDKSGIIK---PGCPVV 180 (429)
Q Consensus 104 FE~lt~~a~~~f~~~~~d~~vlE~GlGGr~DaTnvi~~~~vavITnI~~DHle~LG~tle~Ia~eKa~I~k---~~~~~v 180 (429)
....+-+++|+|+.- +|.+-.--+|+++|||||++||+|+++.|+|+++..|..|++ ++..+|
T Consensus 163 -----------~~~~~~~~~V~E~s~---~~~~~~~~~p~iavitNi~~DHld~~~~~~e~y~~~k~~i~~~~~~~~~~i 228 (491)
T 2f00_A 163 -----------ARLGHGRYLIAEADE---SDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAV 228 (491)
T ss_dssp -----------EECCSSSEEEEECCC---TTSGGGGCCCSEEEECCCCSCSGGGTTTCHHHHHHHHHHHHTTSCTTCEEE
T ss_pred -----------HCCCCCCEEEEEECC---CCCCHHCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf -----------025899889999766---401301148989999778667751206889999999999996699588899
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 544471789889999862105665235763210---------12585244431033334444443222211111469999
Q gi|254780821|r 181 IGHQVYDEVREILVSKAEKMGCPYNVYGDDFYA---------FEKNKCLVYQDKISQTNLTVLGLVGEHQYINAATAICA 251 (429)
Q Consensus 181 ~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~l~G~hn~~Na~~Aiaa 251 (429)
++.+ ++.+.+ .+.........++..... ......+.............++++|.||++|+++|+++
T Consensus 229 ~n~d-d~~~~~----~~~~~~~~v~tfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~G~HN~~NalAAia~ 303 (491)
T 2f00_A 229 MCVD-DPVIRE----LLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAV 303 (491)
T ss_dssp EETT-SHHHHH----HGGGCCSEEEEEESSTTCSEEEEEEEEETTEEEEEEECTTSCCEEEEESSCSHHHHHHHHHHHHH
T ss_pred EECC-CHHHHH----HHHHCCCCEEEEECCCCCCEECCCHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 9798-889999----98754886378600111110012211125665201101234331221035672015349999999
Q ss_pred HHHHHHCCHHHHCCCCCCCCC-CCCCEEEEECCCCCC--CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 875320000110011222233-665303542287544--45787459993363215799888654331147777124311
Q gi|254780821|r 252 VQMAGFTLEKECINAALQSVQ-WFGRLQKITEGPLLN--KLPDHSEVWIDGGHNPNAGLVVSKEISKLKGSSNKPFYLVI 328 (429)
Q Consensus 252 ~~~lg~~i~~~~I~~gL~~~~-~pGR~e~i~~~~~~~--~~~~~~~viiD~AHNp~s~~~l~~~l~~l~~~~~~~i~~I~ 328 (429)
+..+| ++.+.|.++|.++. .|+|||.+....... ...+...++.||||||++++++++.++... +.+++++++
T Consensus 304 a~~lG--i~~e~I~~aL~~F~g~~~R~E~vg~~~~~~~~~~~~~~~i~DdyahnP~si~a~l~al~~~~--~~~~ii~i~ 379 (491)
T 2f00_A 304 ATEEG--IDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGW--PDKNLVMLF 379 (491)
T ss_dssp HHHHT--CCHHHHHHHHHTCCCBTTSSEEEEEEESSSSSSCSSEEEEEEECCCSHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred HHHCC--CCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC--CCCEEEEEE
T ss_conf 99859--95788776654047887414899874212342378978999846789589999999999658--997699997
Q ss_pred CCCCCC----CHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEECCHHHHHHHHHHHCCCC
Q ss_conf 346798----9899999888638889998422889984212789899999998549-97899699899999999860358
Q gi|254780821|r 329 GMVEGK----KYGRYLEAFVELSPIVLSVSLICRGRERQSISITPKVLMQEAKKLG-FQAMACSSMIEALSRVRKINEEL 403 (429)
Q Consensus 329 G~~~dK----d~~~~l~~l~~~~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~eAi~~a~~~~~~~ 403 (429)
+.-.+. -++++.+.+ ..+|.++...+++..+.+ ....+.+.+++.+...+ .++..+++.++|++.+.+.+ +
T Consensus 380 ~~~~~~~~~~~~~e~~~~l-~~aD~vil~~i~~a~e~~-~~g~~~~~l~~~i~~~~~~~~~~~~~~~ea~~~l~~~~--~ 455 (491)
T 2f00_A 380 QPHRFTRTRDLYDDFANVL-TQVDTLLMLEVYPAGEAP-IPGADSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVL--T 455 (491)
T ss_dssp CCBCHHHHTTTHHHHHHHH-TTSSEEEECCCBCSSSCC-CTTSSHHHHTTC-------CCEECCCSSCCHHHHGGGC--C
T ss_pred CCCCCCCHHHHHHHHHHHH-HHCCEEEECCCCCCCCCC-CCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHC--C
T ss_conf 6778724799999999999-869999996666886664-45859999999998559989799799999999999758--9
Q ss_pred CCCEEEEEC--CHHHHHHHHHHCCC
Q ss_conf 867999949--77999999998797
Q gi|254780821|r 404 PPPLILIAG--SLYLAGEALRENGV 426 (429)
Q Consensus 404 ~~d~VLV~G--S~ylvge~l~~~g~ 426 (429)
++|+||++| |++-+.+.|.+.-.
T Consensus 456 ~gDvVL~~Gsg~i~~~~~~l~e~~~ 480 (491)
T 2f00_A 456 GNDLILVQGAGNIGKIARSLAEIKL 480 (491)
T ss_dssp SEEEEEEECSTTHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC
T ss_conf 9899999889988899999999870